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(-) Description

Title :  CRYSTAL STRUCTURE OF NATIVE CIS-CAAD
 
Authors :  Y. Guo, H. Serrano, S. R. Ernst, W. H. Johnson Jr. , M. L. Hackert, C. P. Wh
Date :  01 Apr 10  (Deposition) - 12 Jan 11  (Release) - 29 Feb 12  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.01
Chains :  Asym. Unit :  A
Biol. Unit 1:  A  (3x)
Keywords :  Beta-Alpha-Beta Motif, Tautomerase, Cis-3-Chloroacrylic Acid Dehaloganase, Isomerase, Hydrolase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  Y. Guo, H. Serrano, W. H. Johnson Jr. , S. Ernst, M. L. Hackert, C. P. Whitman
Crystal Structures Of Native And Inactivated Cis-3-Chloroacrylic Acid Dehalogenase: Implications For The Catalytic And Inactivation Mechanisms.
Bioorg. Chem. V. 39 1 2011
PubMed-ID: 21074239  |  Reference-DOI: 10.1016/J.BIOORG.2010.10.001

(-) Compounds

Molecule 1 - CIS-3-CHLOROACRYLIC ACID DEHALOGENASE
    Chains: A
    EC Number: 3.8.1.-
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET3
    Expression System Strain: BL21-GOLD(DE3)
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Fragment: UNP RESIDUES 2-118
    Gene: CIS-CAAD
    Organism Scientific: CORYNEFORM BACTERIUM
    Organism Taxid: 1728

 Structural Features

(-) Chains, Units

  1
Asymmetric Unit : A
Biological Unit 1 (3x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 1)

Asymmetric Unit (1, 1)
No.NameCountTypeFull Name
1SO41Ligand/IonSULFATE ION
Biological Unit 1 (1, 3)
No.NameCountTypeFull Name
1SO43Ligand/IonSULFATE ION

(-) Sites  (1, 1)

Asymmetric Unit (1, 1)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREPRO A:1 , HIS A:28 , THR A:34 , HIS A:69 , ARG A:70 , ARG A:73 , HOH A:154BINDING SITE FOR RESIDUE SO4 A 150

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 3MF8)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 3MF8)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 3MF8)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 3MF8)

(-) Exons   (0, 0)

(no "Exon" information available for 3MF8)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:117
 aligned with Q6VPE5_9CORY | Q6VPE5 from UniProtKB/TrEMBL  Length:150

    Alignment length:117
                                    11        21        31        41        51        61        71        81        91       101       111       
         Q6VPE5_9CORY     2 PVYMVYVSQDRLTPSAKHAVAKAITDAHRGLTGTQHFLAQVNFQEQPAGNVFLGGVQQGGDTIFVHGLHREGRSADLKGQLAQRIVDDVSVAAEIDRKHIWVYFGEMPAQQMVEYGR 118
               SCOP domains --------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------Tautomerase-3mf8A01 A:64-117                           Pfam domains
         Sec.struct. author .eeeeeee....hhhhhhhhhhhhhhhhhhhhh.hhhhheeeeeee.....ee..ee.....eeeeeeee...hhhhhhhhhhhhhhhhhhhh..hhh.eeeeeeeehhhhh..... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------- Transcript
                 3mf8 A   1 PVYMVYVSQDRLTPSAKHAVAKAITDAHRGLTGTQHFLAQVNFQEQPAGNVFLGGVQQGGDTIFVHGLHREGRSADLKGQLAQRIVDDVSVAAEIDRKHIWVYFGEMPAQQMVEYGR 117
                                    10        20        30        40        50        60        70        80        90       100       110
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 3MF8)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 3MF8)

(-) Pfam Domains  (1, 1)

Asymmetric Unit
(-)
Clan: MIF (36)

(-) Gene Ontology  (0, 0)

Asymmetric Unit(hide GO term definitions)
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/TrEMBL
        Q6VPE5_9CORY | Q6VPE5: 2flt 2flz 3mf7

(-) Related Entries Specified in the PDB File

3mf7