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(-) Description

Title :  CRYSTAL STRUCTURE OF THE TRIMERIC AUTOTRANSPORTER ADHESIN HEAD DOMAIN BPAA FROM BURKHOLDERIA PSEUDOMALLEI
 
Authors :  Seattle Structural Genomics Center For Infectious Disease (S
Date :  06 Jan 10  (Deposition) - 12 May 10  (Release) - 12 Jan 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.35
Chains :  Asym. Unit :  A
Biol. Unit 1:  A  (3x)
Keywords :  Niaid, Seattle Structural Genomics Center For Infectious Disease, Ssgcid, Melioidosis, Trimeric Autotransporter, Transport Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  T. E. Edwards, I. Phan, J. Abendroth, S. H. Dieterich, A. Masoudi, W. Guo, S. N. Hewitt, A. Kelley, D. Leibly, M. J. Brittnacher, B. L. Staker, S. I. Miller, W. C. Van Voorhis, P. J. Myler, L. J. Stewart
Structure Of A Burkholderia Pseudomallei Trimeric Autotransporter Adhesin Head.
Plos One V. 5 12803 2010
PubMed-ID: 20862217  |  Reference-DOI: 10.1371/JOURNAL.PONE.0012803

(-) Compounds

Molecule 1 - HAEMAGLUTTININ FAMILY PROTEIN
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Expression System Vector Type: AVA0421
    Gene: BURPS1710B_A0459, XADA
    Organism Scientific: BURKHOLDERIA PSEUDOMALLEI
    Organism Taxid: 320372
    Strain: 1710B

 Structural Features

(-) Chains, Units

  1
Asymmetric Unit : A
Biological Unit 1 (3x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 3LAA)

(-) Sites  (0, 0)

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(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 3LAA)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 3LAA)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 3LAA)

(-) PROSITE Motifs  (0, 0)

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(-) Exons   (0, 0)

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(-) Sequences/Alignments

Asymmetric Unit
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SAPs(SNPs) PROSITE motifs Exons
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Chain A from PDB  Type:PROTEIN  Length:169
 aligned with Q3JLD6_BURP1 | Q3JLD6 from UniProtKB/TrEMBL  Length:2757

    Alignment length:174
                                  2290      2300      2310      2320      2330      2340      2350      2360      2370      2380      2390      2400      2410      2420      2430      2440      2450    
        Q3JLD6_BURP1   2281 STSISSITTNTTNLGNSTAAALGGGATYDPATGAISAPSYTTYNANGTTATNTSVGAAIDNINANGIKYFHANSTDPDSVATGTNSVAIGPNAVANVDYSVAIGSGATTSAAVPVASASVGGLTFGGFAGSAPIGVFSVGAPGAERQITNVAAGRISAASTDAVNGSQLYATNS 2454
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------HIM-3laaA01 A:150-173   ----- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhh................eeee.....eeee.hhhhhhhhhhhhh.............ee.....eee....ee.....eee................-----............ee..........................hhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                3laa A    5 STSISSITTNTTNLGNSTAAALGGGATYDPATGAISAPSYTTYNANGTTATNTSVGAAIDNINANGIKYFHANSTDPDSVATGTNSVAIGPNAVANVDYSVAIGSGATTSAAVPVASAS-----FGGFAGSAPIGVFSVGAPGAERQITNVAAGRISAASTDAVNGSQLYATNS  178
                                    14        24        34        44        54        64        74        84        94       104       114        |-    |  134       144       154       164       174    
                                                                                                                                                123   129
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 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 3LAA)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 3LAA)

(-) Pfam Domains  (1, 1)

Asymmetric Unit
(-)
Clan: no clan defined [family: HIM] (4)

(-) Gene Ontology  (2, 2)

Asymmetric Unit(hide GO term definitions)
Chain A   (Q3JLD6_BURP1 | Q3JLD6)
biological process
    GO:0009405    pathogenesis    The set of specific processes that generate the ability of an organism to induce an abnormal, generally detrimental state in another organism.
cellular component
    GO:0019867    outer membrane    The external membrane of Gram-negative bacteria or certain organelles such as mitochondria and chloroplasts; freely permeable to most ions and metabolites.

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/TrEMBL
        Q3JLD6_BURP1 | Q3JLD6: 3la9

(-) Related Entries Specified in the PDB File

3la9 IODIDE PHASED RELATED ID: BUPSA.01663.A RELATED DB: TARGETDB