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(-) Description

Title :  CRYSTAL STRUCTURE OF ORNITHINE 4,5 AMINOMUTASE (RESTING STATE)
 
Authors :  K. R. Wolthers, C. W. Levy, N. S. Scrutton, D. Leys
Date :  14 Nov 09  (Deposition) - 26 Jan 10  (Release) - 24 Oct 12  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.01
Chains :  Asym. Unit :  A,B,C,D,E,F,G,H
Biol. Unit 1:  A,D,E  (1x)
Biol. Unit 2:  B,E,F,H  (1x)
Biol. Unit 3:  D,F,G,H  (1x)
Biol. Unit 4:  B,C,G  (1x)
Biol. Unit 5:  A,B,C,D,E,G  (1x)
Biol. Unit 6:  B,D,E,F,G,H  (1x)
Keywords :  D-Ornithine 4, 5 Aminomutase (Oam), Metal Binding Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  K. R. Wolthers, C. Levy, N. S. Scrutton, D. Leys
Large-Scale Domain Dynamics And Adenosylcobalamin Reorientation Orchestrate Radical Catalysis In Ornithine 4, 5-Aminomutase.
J. Biol. Chem. V. 285 13942 2010
PubMed-ID: 20106986  |  Reference-DOI: 10.1074/JBC.M109.068908

(-) Compounds

Molecule 1 - D-ORNITHINE AMINOMUTASE E COMPONENT
    Chains: A, B, D, C
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET23D
    Expression System Strain: XL1 BLUE STRATAGENE
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Gene: ORAE
    Organism Scientific: CLOSTRIDIUM STICKLANDII
    Organism Taxid: 1511
 
Molecule 2 - D-ORNITHINE AMINOMUTASE S COMPONENT
    Chains: E, F, H, G
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET23D
    Expression System Strain: XL1 BLUE STRATAGENE
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Gene: ORAS
    Organism Scientific: CLOSTRIDIUM STICKLANDII
    Organism Taxid: 1511

 Structural Features

(-) Chains, Units

  12345678
Asymmetric Unit : ABCDEFGH
Biological Unit 1 (1x): A  DE   
Biological Unit 2 (1x):  B  EF H
Biological Unit 3 (1x):    D FGH
Biological Unit 4 (1x):  BC   G 
Biological Unit 5 (1x): ABCDE G 
Biological Unit 6 (1x):  B DEFGH

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (3, 12)

Asymmetric Unit (3, 12)
No.NameCountTypeFull Name
15AD4Ligand/Ion5'-DEOXYADENOSINE
2B124Ligand/IonCOBALAMIN
3PLP4Ligand/IonPYRIDOXAL-5'-PHOSPHATE
Biological Unit 1 (3, 6)
No.NameCountTypeFull Name
15AD2Ligand/Ion5'-DEOXYADENOSINE
2B122Ligand/IonCOBALAMIN
3PLP2Ligand/IonPYRIDOXAL-5'-PHOSPHATE
Biological Unit 2 (3, 3)
No.NameCountTypeFull Name
15AD1Ligand/Ion5'-DEOXYADENOSINE
2B121Ligand/IonCOBALAMIN
3PLP1Ligand/IonPYRIDOXAL-5'-PHOSPHATE
Biological Unit 3 (3, 3)
No.NameCountTypeFull Name
15AD1Ligand/Ion5'-DEOXYADENOSINE
2B121Ligand/IonCOBALAMIN
3PLP1Ligand/IonPYRIDOXAL-5'-PHOSPHATE
Biological Unit 4 (3, 6)
No.NameCountTypeFull Name
15AD2Ligand/Ion5'-DEOXYADENOSINE
2B122Ligand/IonCOBALAMIN
3PLP2Ligand/IonPYRIDOXAL-5'-PHOSPHATE
Biological Unit 5 (3, 12)
No.NameCountTypeFull Name
15AD4Ligand/Ion5'-DEOXYADENOSINE
2B124Ligand/IonCOBALAMIN
3PLP4Ligand/IonPYRIDOXAL-5'-PHOSPHATE
Biological Unit 6 (3, 6)
No.NameCountTypeFull Name
15AD2Ligand/Ion5'-DEOXYADENOSINE
2B122Ligand/IonCOBALAMIN
3PLP2Ligand/IonPYRIDOXAL-5'-PHOSPHATE

(-) Sites  (12, 12)

Asymmetric Unit (12, 12)
No.NameEvidenceResiduesDescription
01AC1SOFTWARELYS A:629 , HOH A:1661 , ARG C:109 , GLY C:112 , GLN C:113 , SER C:114 , TYR C:160 , SER C:162 , TYR C:187 , ARG C:192 , HIS C:225 , ASN C:226 , HOH C:908BINDING SITE FOR RESIDUE PLP A 1802
02AC2SOFTWAREGLU A:617 , HIS A:618 , SER A:619 , VAL A:620 , GLY A:621 , VAL A:625 , ALA A:666 , SER A:667 , ILE A:669 , ILE A:670 , SER A:671 , HIS A:672 , GLY A:701 , GLY A:702 , THR A:703 , PHE A:719 , GLY A:720 , SER A:723 , VAL A:728 , HOH A:912 , HOH A:950 , HOH A:1297 , HOH A:2153 , HOH A:2982 , HIS C:115 , TYR C:116 , ILE C:127 , 5AD C:767 , HOH C:1285 , HOH C:2766BINDING SITE FOR RESIDUE B12 A 1801
03AC3SOFTWARELEU A:489 , HOH A:861 , HOH A:923 , HOH A:1074 , B12 C:1801BINDING SITE FOR RESIDUE 5AD A 767
04AC4SOFTWARELYS B:629 , HIS B:630 , HOH B:774 , HOH B:967 , ARG D:109 , GLY D:112 , GLN D:113 , SER D:114 , TYR D:160 , SER D:162 , TYR D:187 , ARG D:192 , HIS D:225 , ASN D:226BINDING SITE FOR RESIDUE PLP B 1802
05AC5SOFTWAREGLU B:615 , GLU B:617 , HIS B:618 , SER B:619 , VAL B:620 , GLY B:621 , VAL B:625 , ALA B:666 , SER B:667 , ILE B:669 , ILE B:670 , SER B:671 , HIS B:672 , GLY B:701 , GLY B:702 , THR B:703 , PHE B:719 , GLY B:720 , SER B:723 , VAL B:728 , HOH B:807 , HOH B:850 , HOH B:858 , HOH B:943 , HOH B:956 , HOH B:1004 , HOH B:1232 , HOH B:1883 , HOH B:1978 , HOH B:2337 , HOH B:2813 , HOH B:2819 , HOH B:3190 , HIS D:115 , TYR D:116 , ASP D:490 , 5AD D:767 , HOH D:856 , HOH D:936 , HOH D:1594BINDING SITE FOR RESIDUE B12 B 1801
06AC6SOFTWARELEU B:489 , HOH B:781 , HOH B:983 , HOH B:1019 , B12 D:1801BINDING SITE FOR RESIDUE 5AD B 767
07AC7SOFTWAREARG B:109 , GLY B:112 , GLN B:113 , SER B:114 , TYR B:160 , SER B:162 , TYR B:187 , ARG B:192 , HIS B:225 , ASN B:226 , LYS D:629 , HOH D:823 , HOH D:844BINDING SITE FOR RESIDUE PLP D 1802
08AC8SOFTWARETYR B:116 , ILE B:127 , 5AD B:767 , HOH B:781 , HOH B:860 , HOH B:1534 , HOH B:3091 , GLU D:615 , GLU D:617 , HIS D:618 , SER D:619 , VAL D:620 , GLY D:621 , GLU D:624 , VAL D:625 , ALA D:666 , SER D:667 , ILE D:669 , ILE D:670 , SER D:671 , HIS D:672 , GLY D:701 , GLY D:702 , THR D:703 , PHE D:719 , GLY D:720 , SER D:723 , VAL D:728 , HOH D:875 , HOH D:886 , HOH D:975 , HOH D:1504 , HOH D:1759 , HOH D:1921BINDING SITE FOR RESIDUE B12 D 1801
09AC9SOFTWAREB12 B:1801 , LEU D:489 , HOH D:785 , HOH D:915 , HOH D:990 , HOH D:1020 , HOH D:2785BINDING SITE FOR RESIDUE 5AD D 767
10BC1SOFTWAREARG A:109 , GLY A:112 , GLN A:113 , SER A:114 , TYR A:160 , SER A:162 , TYR A:187 , ARG A:192 , HIS A:225 , ASN A:226 , HOH A:1618 , LYS C:629 , HOH C:854 , HOH C:874BINDING SITE FOR RESIDUE PLP C 1802
11BC2SOFTWARETYR A:116 , ILE A:127 , 5AD A:767 , HOH A:923 , HOH A:1045 , GLU C:615 , GLU C:617 , HIS C:618 , SER C:619 , VAL C:620 , GLY C:621 , GLU C:624 , VAL C:625 , ALA C:666 , SER C:667 , ILE C:669 , ILE C:670 , SER C:671 , HIS C:672 , GLY C:701 , GLY C:702 , THR C:703 , PHE C:719 , GLY C:720 , SER C:723 , VAL C:728 , HOH C:782 , HOH C:787 , HOH C:843 , HOH C:946 , HOH C:952 , HOH C:984 , HOH C:989 , HOH C:1036 , HOH C:1251 , HOH C:1362 , HOH C:1706 , HOH C:1779 , HOH C:2998BINDING SITE FOR RESIDUE B12 C 1801
12BC3SOFTWAREB12 A:1801 , LEU C:489 , HOH C:936 , HOH C:1063 , HOH C:1699 , HOH C:2858BINDING SITE FOR RESIDUE 5AD C 767

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 3KP1)

(-) Cis Peptide Bonds  (8, 8)

Asymmetric Unit
No.Residues
1Pro A:272 -Pro A:273
2Tyr A:416 -Pro A:417
3Pro B:272 -Pro B:273
4Tyr B:416 -Pro B:417
5Pro D:272 -Pro D:273
6Tyr D:416 -Pro D:417
7Pro C:272 -Pro C:273
8Tyr C:416 -Pro C:417

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 3KP1)

(-) PROSITE Motifs  (1, 4)

Asymmetric Unit (1, 4)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1B12_BINDINGPS51332 B12-binding domain profile.OAME_ACESD602-739
 
 
 		  4A:605-740
B:605-740
C:605-740
D:605-740
Biological Unit 1 (1, 2)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1B12_BINDINGPS51332 B12-binding domain profile.OAME_ACESD602-739
 
 
 		  2A:605-740
-
-
D:605-740
Biological Unit 2 (1, 1)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1B12_BINDINGPS51332 B12-binding domain profile.OAME_ACESD602-739
 
 
 		  1-
B:605-740
-
-
Biological Unit 3 (1, 1)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1B12_BINDINGPS51332 B12-binding domain profile.OAME_ACESD602-739
 
 
 		  1-
-
-
D:605-740
Biological Unit 4 (1, 2)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1B12_BINDINGPS51332 B12-binding domain profile.OAME_ACESD602-739
 
 
 		  2-
B:605-740
C:605-740
-
Biological Unit 5 (1, 4)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1B12_BINDINGPS51332 B12-binding domain profile.OAME_ACESD602-739
 
 
 		  4A:605-740
B:605-740
C:605-740
D:605-740
Biological Unit 6 (1, 2)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1B12_BINDINGPS51332 B12-binding domain profile.OAME_ACESD602-739
 
 
 		  2-
B:605-740
-
D:605-740

(-) Exons   (0, 0)

(no "Exon" information available for 3KP1)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:726
 aligned with OAME_ACESD | E3PY95 from UniProtKB/Swiss-Prot  Length:740

    Alignment length:731
                                    16        26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286       296       306       316       326       336       346       356       366       376       386       396       406       416       426       436       446       456       466       476       486       496       506       516       526       536       546       556       566       576       586       596       606       616       626       636       646       656       666       676       686       696       706       716       726       736 
           OAME_ACESD     7 LRVNEKLDVENILKDLDKYTPKRRGWTWRQPAENLQMGPFIYKDASTPLENSVALPSAKYFGDIDPQPLPVITTEIASGRFEDDIRRMRMAAWHGADHIMVIRTAGQSHYDGLIEGTPQGIGGVPITRKQVRAQRKALDLIEEEVGRPINYHSYVSGVAGPDIAVMFAEEGVNGAHQDPQYNVLYRNINMIRSFIDACESKTIMAWADMAQIDGAHNANATAREAWKVMPELMVQHALNSIFSLKVGMKKSNICLSTVPPTAPPAPSMYLDLPYAVALREMFEGYRMRAQMNTKYMEASTREATVTHVLNLLISKLTRADIQSTITPDEGRNVPWHIYNIEACDTAKQALIGMDGLMDMVQLKREGVLGDTVRELKERAVLFMEEIIEAGGYFNAVEQGFFVDSGYYPERNGDGIARQINGGIGAGTVFERDEDYMAPVTAHFGYNNVKQYDEALVSEPSKLIDGCTLEVPEKIVYIDELDENDNVNVRMEETKEFRHSSMIKPEVEWQADGTVLLTMFLPTSKRVAEFAAIEFAKKMNLEEVEVINREVMQEAEGTRIELKGRVPFSIDINSLVIPPEPEILSEDEIREDIEKTPLKIVAATVGEDEHSVGLREVIDIKHGGIEKYGVEVHYLGTSVPVEKLVDAAIELKADAILASTIISHDDIHYKNMKRIHELAVEKGIRDKIMIGCGGTQVTPEVAVKQGVDAGFGRGSKGIHVATFLVKKRREMR 737
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......hhhhhh.hhhhh...............eee..eee..ee........hhhhhhhh....ee..eeeee....hhhhhhhhhhhhhhh...eee.....hhhhh................hhhhhhhhhhhhhhhhhhhh...eeeee....hhhhhhhhhhhhh..eee.hhhhhhhhhh.hhhhhhhhhhhhhhhhhhh..eee..hhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhh.hhh.eeeee........hhhhhhhhhhhhhhhhh...eeee.........hhhhhhhhhhhhhhhhhhh...ee............hhhhhhhhhhhhhhhhhhh.hhhh.eee...hhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhh..............................ee.................hhhhhhhhh.hhhhhhh.....hhhhh..........hhhhhhhhhhhhh--.ee..........eeeeeeee..hhhhhhhhhhhhhhhh..eeeeeeeeeeee...eeeeeeeee....ee.hhh....---..hhhhhhhhhhhh..eeeeee......hhhhhhh......hhhhhh.eeee.....hhhhhhhhhhhh...eeeee...hhhhhhhhhhhhhhhhhhhh......eeeee....hhhhhhh....eee....hhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------B12_BINDING  PDB: A:605-740 UniProt: 602-739                                                                                             PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3kp1 A   7 LRVNEKLDVENILKDLDKYTPKRRGWTWRQPAENLQMGPFIYKDASTPLENSVALPSAKYFGDIDPQPLPVITTEIASGRFEDDIRRMRMAAWHGADHIMVIRTAGQSHYDGLIEGTPQGIGGVPITRKQVRAQRKALDLIEEEVGRPINYHSYVSGVAGPDIAVMFAEEGVNGAHQDPQYNVLYRNINMIRSFIDACESKTIMAWADMAQIDGAHNANATAREAWKVMPELMVQHALNSIFSLKVGMKKSNICLSTVPPTAPPAPSMYLDLPYAVALREMFEGYRMRAQMNTKYMEASTREATVTHVLNLLISKLTRADIQSTITPDEGRNVPWHIYNIEACDTAKQALIGMDGLMDMVQLKREGVLGDTVRELKERAVLFMEEIIEAGGYFNAVEQGFFVDSGYYPERNGDGIARQINGGIGAGTVFERDEDYMAPVTAHFGYNNVKQYDEALVSEPSKLIDGCTLEVPEKIVYIDELDENDNVNVRMEETKEFR--SMIKPEVEWQADGTVLLTMFLPTSKRVAEFAAIEFAKKMNLEEVEVINREVMQEAEGTRIELKGRVPFSIDINSLVIPP---ILSEDEIREDIEKTPLKIVAATVGEDEHSVGLREVIDIKHGGIEKYGVEVHYLGTSVPVEKLVDAAIELKADAILASTIISHDDIHYKNMKRIHELAVEKGIRDKIMIGCGGTQVTPEVAVKQGVDAGFGRGSKGIHVATFLVKKRREMR 740
                                    16        26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216  ||   229       239       249       259       269       279       289       299       309       319       329       339       349       359       369       379       389       399       409       419       429       439       449       459       469       479       489       499      |509       519       529       539       549       559       569       579       | - |     599       609       619       629       639       649       659       669       679       689       699       709       719       729       739 
                                                                                                                                                                                                                                              219|                                                                                                                                                                                                                                                                                        506  |                                                                           587 591                                                                                                                                                     
                                                                                                                                                                                                                                               223                                                                                                                                                                                                                                                                                           509                                                                                                                                                                                                                                       


Chain B from PDB  Type:PROTEIN  Length:726
 aligned with OAME_ACESD | E3PY95 from UniProtKB/Swiss-Prot  Length:740

    Alignment length:731
                                    16        26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286       296       306       316       326       336       346       356       366       376       386       396       406       416       426       436       446       456       466       476       486       496       506       516       526       536       546       556       566       576       586       596       606       616       626       636       646       656       666       676       686       696       706       716       726       736 
           OAME_ACESD     7 LRVNEKLDVENILKDLDKYTPKRRGWTWRQPAENLQMGPFIYKDASTPLENSVALPSAKYFGDIDPQPLPVITTEIASGRFEDDIRRMRMAAWHGADHIMVIRTAGQSHYDGLIEGTPQGIGGVPITRKQVRAQRKALDLIEEEVGRPINYHSYVSGVAGPDIAVMFAEEGVNGAHQDPQYNVLYRNINMIRSFIDACESKTIMAWADMAQIDGAHNANATAREAWKVMPELMVQHALNSIFSLKVGMKKSNICLSTVPPTAPPAPSMYLDLPYAVALREMFEGYRMRAQMNTKYMEASTREATVTHVLNLLISKLTRADIQSTITPDEGRNVPWHIYNIEACDTAKQALIGMDGLMDMVQLKREGVLGDTVRELKERAVLFMEEIIEAGGYFNAVEQGFFVDSGYYPERNGDGIARQINGGIGAGTVFERDEDYMAPVTAHFGYNNVKQYDEALVSEPSKLIDGCTLEVPEKIVYIDELDENDNVNVRMEETKEFRHSSMIKPEVEWQADGTVLLTMFLPTSKRVAEFAAIEFAKKMNLEEVEVINREVMQEAEGTRIELKGRVPFSIDINSLVIPPEPEILSEDEIREDIEKTPLKIVAATVGEDEHSVGLREVIDIKHGGIEKYGVEVHYLGTSVPVEKLVDAAIELKADAILASTIISHDDIHYKNMKRIHELAVEKGIRDKIMIGCGGTQVTPEVAVKQGVDAGFGRGSKGIHVATFLVKKRREMR 737
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......hhhhhh.hhhhh...............eee..eee..ee........hhhhhhhh....ee..eeeee....hhhhhhhhhhhhhhh...eee.....hhhhh................hhhhhhhhhhhhhhhhhhhh...eeeee....hhhhhhhhhhhh...eee.hhhhhhhh...hhhhhhhhhhhhhhhhhhh..eee..hhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhh.hhh.eeeee........hhhhhhhhhhhhhhhhh...eeee.........hhhhhhhhhhhhhhhhhhh...ee............hhhhhhhhhhhhhhhhhhh.hhhh.eee...hhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhh..............................ee.....................hhhhh.hhhhhhh.....hhhhh..........hhhhhhhhhhhhh--.ee..........eeeeeeee..hhhhhhhhhhhhhhhh..eeeeeeeeeeee...eeeeeeeee....ee.hhh....---..hhhhhhhhhhhh..eeeeee......hhhhhhh......hhhhhh.eeee.....hhhhhhhhhhhh...eeeee...hhhhhhhhhhhhhhhhhhhh.hhhhheeeee....hhhhhhh....eee....hhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------B12_BINDING  PDB: B:605-740 UniProt: 602-739                                                                                             PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3kp1 B   7 LRVNEKLDVENILKDLDKYTPKRRGWTWRQPAENLQMGPFIYKDASTPLENSVALPSAKYFGDIDPQPLPVITTEIASGRFEDDIRRMRMAAWHGADHIMVIRTAGQSHYDGLIEGTPQGIGGVPITRKQVRAQRKALDLIEEEVGRPINYHSYVSGVAGPDIAVMFAEEGVNGAHQDPQYNVLYRNINMIRSFIDACESKTIMAWADMAQIDGAHNANATAREAWKVMPELMVQHALNSIFSLKVGMKKSNICLSTVPPTAPPAPSMYLDLPYAVALREMFEGYRMRAQMNTKYMEASTREATVTHVLNLLISKLTRADIQSTITPDEGRNVPWHIYNIEACDTAKQALIGMDGLMDMVQLKREGVLGDTVRELKERAVLFMEEIIEAGGYFNAVEQGFFVDSGYYPERNGDGIARQINGGIGAGTVFERDEDYMAPVTAHFGYNNVKQYDEALVSEPSKLIDGCTLEVPEKIVYIDELDENDNVNVRMEETKEFR--SMIKPEVEWQADGTVLLTMFLPTSKRVAEFAAIEFAKKMNLEEVEVINREVMQEAEGTRIELKGRVPFSIDINSLVIPP---ILSEDEIREDIEKTPLKIVAATVGEDEHSVGLREVIDIKHGGIEKYGVEVHYLGTSVPVEKLVDAAIELKADAILASTIISHDDIHYKNMKRIHELAVEKGIRDKIMIGCGGTQVTPEVAVKQGVDAGFGRGSKGIHVATFLVKKRREMR 740
                                    16        26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216  ||   229       239       249       259       269       279       289       299       309       319       329       339       349       359       369       379       389       399       409       419       429       439       449       459       469       479       489       499      |509       519       529       539       549       559       569       579       | - |     599       609       619       629       639       649       659       669       679       689       699       709       719       729       739 
                                                                                                                                                                                                                                              219|                                                                                                                                                                                                                                                                                        506  |                                                                           587 591                                                                                                                                                     
                                                                                                                                                                                                                                               223                                                                                                                                                                                                                                                                                           509                                                                                                                                                                                                                                       


Chain C from PDB  Type:PROTEIN  Length:726
 aligned with OAME_ACESD | E3PY95 from UniProtKB/Swiss-Prot  Length:740

    Alignment length:731
                                    16        26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286       296       306       316       326       336       346       356       366       376       386       396       406       416       426       436       446       456       466       476       486       496       506       516       526       536       546       556       566       576       586       596       606       616       626       636       646       656       666       676       686       696       706       716       726       736 
           OAME_ACESD     7 LRVNEKLDVENILKDLDKYTPKRRGWTWRQPAENLQMGPFIYKDASTPLENSVALPSAKYFGDIDPQPLPVITTEIASGRFEDDIRRMRMAAWHGADHIMVIRTAGQSHYDGLIEGTPQGIGGVPITRKQVRAQRKALDLIEEEVGRPINYHSYVSGVAGPDIAVMFAEEGVNGAHQDPQYNVLYRNINMIRSFIDACESKTIMAWADMAQIDGAHNANATAREAWKVMPELMVQHALNSIFSLKVGMKKSNICLSTVPPTAPPAPSMYLDLPYAVALREMFEGYRMRAQMNTKYMEASTREATVTHVLNLLISKLTRADIQSTITPDEGRNVPWHIYNIEACDTAKQALIGMDGLMDMVQLKREGVLGDTVRELKERAVLFMEEIIEAGGYFNAVEQGFFVDSGYYPERNGDGIARQINGGIGAGTVFERDEDYMAPVTAHFGYNNVKQYDEALVSEPSKLIDGCTLEVPEKIVYIDELDENDNVNVRMEETKEFRHSSMIKPEVEWQADGTVLLTMFLPTSKRVAEFAAIEFAKKMNLEEVEVINREVMQEAEGTRIELKGRVPFSIDINSLVIPPEPEILSEDEIREDIEKTPLKIVAATVGEDEHSVGLREVIDIKHGGIEKYGVEVHYLGTSVPVEKLVDAAIELKADAILASTIISHDDIHYKNMKRIHELAVEKGIRDKIMIGCGGTQVTPEVAVKQGVDAGFGRGSKGIHVATFLVKKRREMR 737
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......hhhhhh.hhhhh...............eee..eee..ee........hhhhhhhh....ee..eeeee....hhhhhhhhhhhhhhh...eee.....hhhhh................hhhhhhhhhhhhhhhhhhhh...eeeee....hhhhhhhhhhhhh..eee.hhhhhhhhhh.hhhhhhhhhhhhhhhhhhh..eee..hhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhh.hhh.eeeee........hhhhhhhhhhhhhhhhh...eeee.........hhhhhhhhhhhhhhhhhhh...ee............hhhhhhhhhhhhhhhhhhh.hhhh.eee...hhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhh..............................ee.....................hhhhhhhhhhhhh.....hhhhh..........hhhhhhhhhhhhh--.ee..........eeeeeeee..hhhhhhhhhhhhhhhh..eeeeeeeeeeee...eeeeeeeee....ee.hhh....---..hhhhhhhhhhhh..eeeeee......hhhhhhh......hhhhhh.eeee.....hhhhhhhhhhhh...eeeee...hhhhhhhhhhhhhhhhhhhh.hhhhheeeee....hhhhhhhh...eee....hhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------B12_BINDING  PDB: C:605-740 UniProt: 602-739                                                                                             PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3kp1 C   7 LRVNEKLDVENILKDLDKYTPKRRGWTWRQPAENLQMGPFIYKDASTPLENSVALPSAKYFGDIDPQPLPVITTEIASGRFEDDIRRMRMAAWHGADHIMVIRTAGQSHYDGLIEGTPQGIGGVPITRKQVRAQRKALDLIEEEVGRPINYHSYVSGVAGPDIAVMFAEEGVNGAHQDPQYNVLYRNINMIRSFIDACESKTIMAWADMAQIDGAHNANATAREAWKVMPELMVQHALNSIFSLKVGMKKSNICLSTVPPTAPPAPSMYLDLPYAVALREMFEGYRMRAQMNTKYMEASTREATVTHVLNLLISKLTRADIQSTITPDEGRNVPWHIYNIEACDTAKQALIGMDGLMDMVQLKREGVLGDTVRELKERAVLFMEEIIEAGGYFNAVEQGFFVDSGYYPERNGDGIARQINGGIGAGTVFERDEDYMAPVTAHFGYNNVKQYDEALVSEPSKLIDGCTLEVPEKIVYIDELDENDNVNVRMEETKEFR--SMIKPEVEWQADGTVLLTMFLPTSKRVAEFAAIEFAKKMNLEEVEVINREVMQEAEGTRIELKGRVPFSIDINSLVIPP---ILSEDEIREDIEKTPLKIVAATVGEDEHSVGLREVIDIKHGGIEKYGVEVHYLGTSVPVEKLVDAAIELKADAILASTIISHDDIHYKNMKRIHELAVEKGIRDKIMIGCGGTQVTPEVAVKQGVDAGFGRGSKGIHVATFLVKKRREMR 740
                                    16        26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216  ||   229       239       249       259       269       279       289       299       309       319       329       339       349       359       369       379       389       399       409       419       429       439       449       459       469       479       489       499      |509       519       529       539       549       559       569       579       | - |     599       609       619       629       639       649       659       669       679       689       699       709       719       729       739 
                                                                                                                                                                                                                                              219|                                                                                                                                                                                                                                                                                        506  |                                                                           587 591                                                                                                                                                     
                                                                                                                                                                                                                                               223                                                                                                                                                                                                                                                                                           509                                                                                                                                                                                                                                       


Chain D from PDB  Type:PROTEIN  Length:726
 aligned with OAME_ACESD | E3PY95 from UniProtKB/Swiss-Prot  Length:740

    Alignment length:731
                                    16        26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286       296       306       316       326       336       346       356       366       376       386       396       406       416       426       436       446       456       466       476       486       496       506       516       526       536       546       556       566       576       586       596       606       616       626       636       646       656       666       676       686       696       706       716       726       736 
           OAME_ACESD     7 LRVNEKLDVENILKDLDKYTPKRRGWTWRQPAENLQMGPFIYKDASTPLENSVALPSAKYFGDIDPQPLPVITTEIASGRFEDDIRRMRMAAWHGADHIMVIRTAGQSHYDGLIEGTPQGIGGVPITRKQVRAQRKALDLIEEEVGRPINYHSYVSGVAGPDIAVMFAEEGVNGAHQDPQYNVLYRNINMIRSFIDACESKTIMAWADMAQIDGAHNANATAREAWKVMPELMVQHALNSIFSLKVGMKKSNICLSTVPPTAPPAPSMYLDLPYAVALREMFEGYRMRAQMNTKYMEASTREATVTHVLNLLISKLTRADIQSTITPDEGRNVPWHIYNIEACDTAKQALIGMDGLMDMVQLKREGVLGDTVRELKERAVLFMEEIIEAGGYFNAVEQGFFVDSGYYPERNGDGIARQINGGIGAGTVFERDEDYMAPVTAHFGYNNVKQYDEALVSEPSKLIDGCTLEVPEKIVYIDELDENDNVNVRMEETKEFRHSSMIKPEVEWQADGTVLLTMFLPTSKRVAEFAAIEFAKKMNLEEVEVINREVMQEAEGTRIELKGRVPFSIDINSLVIPPEPEILSEDEIREDIEKTPLKIVAATVGEDEHSVGLREVIDIKHGGIEKYGVEVHYLGTSVPVEKLVDAAIELKADAILASTIISHDDIHYKNMKRIHELAVEKGIRDKIMIGCGGTQVTPEVAVKQGVDAGFGRGSKGIHVATFLVKKRREMR 737
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......hhhhhh.hhhhh...............eee..eee..ee........hhhhhhhh....ee..eeeee....hhhhhhhhhhhhhhh...eee.....hhhhh................hhhhhhhhhhhhhhhhhhhh...eeeee....hhhhhhhhhhhh...eee.hhhhhhhhhh.hhhhhhhhhhhhhhhhhhh..eee..hhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhh.hhh.eeeee........hhhhhhhhhhhhhhhhh...eeee.........hhhhhhhhhhhhhhhhhhh...eee...........hhhhhhhhhhhhhhhhhhh.hhhh.eee...hhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhh..............................ee...........................hhhhhhh.....hhhhh..........hhhhhhhhhhhhh--.ee..........eeeeeeee..hhhhhhhhhhhhhhhh..eeeeeeeeeeee...eeeeeeeee....ee.hhh....---..hhhhhhhhhhhh..eeeeee......hhhhhhh......hhhhhh.eeee.....hhhhhhhhhhhh...eeeee...hhhhhhhhhhhhhhhhhhhh.hhhhheeeee....hhhhhhhh...eee....hhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------B12_BINDING  PDB: D:605-740 UniProt: 602-739                                                                                             PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3kp1 D   7 LRVNEKLDVENILKDLDKYTPKRRGWTWRQPAENLQMGPFIYKDASTPLENSVALPSAKYFGDIDPQPLPVITTEIASGRFEDDIRRMRMAAWHGADHIMVIRTAGQSHYDGLIEGTPQGIGGVPITRKQVRAQRKALDLIEEEVGRPINYHSYVSGVAGPDIAVMFAEEGVNGAHQDPQYNVLYRNINMIRSFIDACESKTIMAWADMAQIDGAHNANATAREAWKVMPELMVQHALNSIFSLKVGMKKSNICLSTVPPTAPPAPSMYLDLPYAVALREMFEGYRMRAQMNTKYMEASTREATVTHVLNLLISKLTRADIQSTITPDEGRNVPWHIYNIEACDTAKQALIGMDGLMDMVQLKREGVLGDTVRELKERAVLFMEEIIEAGGYFNAVEQGFFVDSGYYPERNGDGIARQINGGIGAGTVFERDEDYMAPVTAHFGYNNVKQYDEALVSEPSKLIDGCTLEVPEKIVYIDELDENDNVNVRMEETKEFR--SMIKPEVEWQADGTVLLTMFLPTSKRVAEFAAIEFAKKMNLEEVEVINREVMQEAEGTRIELKGRVPFSIDINSLVIPP---ILSEDEIREDIEKTPLKIVAATVGEDEHSVGLREVIDIKHGGIEKYGVEVHYLGTSVPVEKLVDAAIELKADAILASTIISHDDIHYKNMKRIHELAVEKGIRDKIMIGCGGTQVTPEVAVKQGVDAGFGRGSKGIHVATFLVKKRREMR 740
                                    16        26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216  ||   229       239       249       259       269       279       289       299       309       319       329       339       349       359       369       379       389       399       409       419       429       439       449       459       469       479       489       499      |509       519       529       539       549       559       569       579       | - |     599       609       619       629       639       649       659       669       679       689       699       709       719       729       739 
                                                                                                                                                                                                                                              219|                                                                                                                                                                                                                                                                                        506  |                                                                           587 591                                                                                                                                                     
                                                                                                                                                                                                                                               223                                                                                                                                                                                                                                                                                           509                                                                                                                                                                                                                                       


Chain E from PDB  Type:PROTEIN  Length:109
 aligned with OAMS_ACESD | E3PY96 from UniProtKB/Swiss-Prot  Length:121

    Alignment length:109
                                    15        25        35        45        55        65        75        85        95       105         
           OAMS_ACESD     6 DFQQRRAHLANLSDEELQTRFWEMAEKIVDPLLDLGKKNTTPSIERSVLLRMGFSSLEAKAIVDKTMDRGLMGKGAGHIVYKIAKEKNISVREAGLALSEGKYWDDAIQ 114
               SCOP domains ------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhheehhhhhhhhhhhh..hhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhh..hhhhhhhhhhh..hhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------- Transcript
                 3kp1 E   6 DFQQRRAHLANLSDEELQTRFWEMAEKIVDPLLDLGKKNTTPSIERSVLLRMGFSSLEAKAIVDKTMDRGLMGKGAGHIVYKIAKEKNISVREAGLALSEGKYWDDAIQ 114
                                    15        25        35        45        55        65        75        85        95       105         


Chain F from PDB  Type:PROTEIN  Length:109
 aligned with OAMS_ACESD | E3PY96 from UniProtKB/Swiss-Prot  Length:121

    Alignment length:109
                                    15        25        35        45        55        65        75        85        95       105         
           OAMS_ACESD     6 DFQQRRAHLANLSDEELQTRFWEMAEKIVDPLLDLGKKNTTPSIERSVLLRMGFSSLEAKAIVDKTMDRGLMGKGAGHIVYKIAKEKNISVREAGLALSEGKYWDDAIQ 114
               SCOP domains ------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhheehhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhh..hhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------- Transcript
                 3kp1 F   6 DFQQRRAHLANLSDEELQTRFWEMAEKIVDPLLDLGKKNTTPSIERSVLLRMGFSSLEAKAIVDKTMDRGLMGKGAGHIVYKIAKEKNISVREAGLALSEGKYWDDAIQ 114
                                    15        25        35        45        55        65        75        85        95       105         


Chain G from PDB  Type:PROTEIN  Length:109
 aligned with OAMS_ACESD | E3PY96 from UniProtKB/Swiss-Prot  Length:121

    Alignment length:109
                                    15        25        35        45        55        65        75        85        95       105         
           OAMS_ACESD     6 DFQQRRAHLANLSDEELQTRFWEMAEKIVDPLLDLGKKNTTPSIERSVLLRMGFSSLEAKAIVDKTMDRGLMGKGAGHIVYKIAKEKNISVREAGLALSEGKYWDDAIQ 114
               SCOP domains ------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhheehhhhhhhhhhhh..hhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhh..hhhhhhhhhhh..hhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------- Transcript
                 3kp1 G   6 DFQQRRAHLANLSDEELQTRFWEMAEKIVDPLLDLGKKNTTPSIERSVLLRMGFSSLEAKAIVDKTMDRGLMGKGAGHIVYKIAKEKNISVREAGLALSEGKYWDDAIQ 114
                                    15        25        35        45        55        65        75        85        95       105         


Chain H from PDB  Type:PROTEIN  Length:109
 aligned with OAMS_ACESD | E3PY96 from UniProtKB/Swiss-Prot  Length:121

    Alignment length:109
                                    15        25        35        45        55        65        75        85        95       105         
           OAMS_ACESD     6 DFQQRRAHLANLSDEELQTRFWEMAEKIVDPLLDLGKKNTTPSIERSVLLRMGFSSLEAKAIVDKTMDRGLMGKGAGHIVYKIAKEKNISVREAGLALSEGKYWDDAIQ 114
               SCOP domains ------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhheehhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhh..hhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------- Transcript
                 3kp1 H   6 DFQQRRAHLANLSDEELQTRFWEMAEKIVDPLLDLGKKNTTPSIERSVLLRMGFSSLEAKAIVDKTMDRGLMGKGAGHIVYKIAKEKNISVREAGLALSEGKYWDDAIQ 114
                                    15        25        35        45        55        65        75        85        95       105
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 3KP1)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 3KP1)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 3KP1)

(-) Gene Ontology  (7, 12)

Asymmetric Unit(hide GO term definitions)
Chain A,B,C,D   (OAME_ACESD | E3PY95)
molecular function
    GO:0047831    D-ornithine 4,5-aminomutase activity    Catalysis of the reaction: D-ornithine = (2R,4S)-2,4-diaminopentanoate.
    GO:0003824    catalytic activity    Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
    GO:0031419    cobalamin binding    Interacting selectively and non-covalently with cobalamin (vitamin B12), a water-soluble vitamin characterized by possession of a corrin nucleus containing a cobalt atom.
    GO:0016853    isomerase activity    Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5.
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.
    GO:0046983    protein dimerization activity    The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits.
biological process
    GO:0008152    metabolic process    The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.

Chain E,F,G,H   (OAMS_ACESD | E3PY96)
molecular function
    GO:0047831    D-ornithine 4,5-aminomutase activity    Catalysis of the reaction: D-ornithine = (2R,4S)-2,4-diaminopentanoate.
    GO:0003824    catalytic activity    Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
    GO:0031419    cobalamin binding    Interacting selectively and non-covalently with cobalamin (vitamin B12), a water-soluble vitamin characterized by possession of a corrin nucleus containing a cobalt atom.
    GO:0016853    isomerase activity    Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5.
biological process
    GO:0008152    metabolic process    The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.

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  3kp1
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        OAME_ACESD | E3PY95: 3kow 3kox 3koy 3koz 3kp0
        OAMS_ACESD | E3PY96: 3kow 3kox 3koy 3koz 3kp0

(-) Related Entries Specified in the PDB File

3kow CRYSTAL STRUCTURE OF ORNITHINE 4,5 AMINOMUTASE BACKSOAKED COMPLEX
3kox CRYSTAL STRUCTURE OF ORNITHINE 4,5 AMINOMUTASE IN COMPLEX WITH 2,4-DIAMINOBUTYRATE (ANAEROBIC)
3koy CRYSTAL STRUCTURE OF ORNITHINE 4,5 AMINOMUTASE IN COMPLEX WITH ORNITHINE (AEROBIC)
3koz CRYSTAL STRUCTURE OF ORNITHINE 4,5 AMINOMUTASE IN COMPLEX WITH ORNITHINE (ANAEROBIC)
3kp0 CRYSTAL STRUCTURE OF ORNITHINE 4,5 AMINOMUTASE IN COMPLEX WITH 2,4-DIAMINOBUTYRATE (DAB) (AEROBIC)