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(-) Description

Title :  CRYSTAL STRUCTURE OF ORNITHINE 4,5 AMINOMUTASE IN COMPLEX WITH ORNITHINE (AEROBIC)
 
Authors :  K. R. Wolthers, C. W. Levy, N. S. Scrutton, D. Leys
Date :  14 Nov 09  (Deposition) - 26 Jan 10  (Release) - 24 Oct 12  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.80
Chains :  Asym. Unit :  A,B,C,D,E,F,G,H
Biol. Unit 1:  A,E  (1x)
Biol. Unit 2:  D,H  (1x)
Biol. Unit 3:  C,G  (1x)
Biol. Unit 4:  B,F  (1x)
Biol. Unit 5:  A,C,E,G  (1x)
Biol. Unit 6:  B,D,F,H  (1x)
Keywords :  D-Ornithine 4, 5 Aminomutase (Oam), Ornithine Complex, Aerobic, Metal Binding Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  K. R. Wolthers, C. Levy, N. S. Scrutton, D. Leys
Large-Scale Domain Dynamics And Adenosylcobalamin Reorientation Orchestrate Radical Catalysis In Ornithine 4, 5-Aminomutase.
J. Biol. Chem. V. 285 13942 2010
PubMed-ID: 20106986  |  Reference-DOI: 10.1074/JBC.M109.068908

(-) Compounds

Molecule 1 - D-ORNITHINE AMINOMUTASE E COMPONENT
    Chains: A, B, C, D
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET23D
    Expression System Strain: XL1 BLUE STRATAGENE
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Gene: ORAE
    Organism Scientific: CLOSTRIDIUM STICKLANDII
    Organism Taxid: 1511
 
Molecule 2 - D-ORNITHINE AMINOMUTASE S COMPONENT
    Chains: E, F, G, H
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET23D
    Expression System Strain: XL1 BLUE STRATAGENE
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Gene: ORAS
    Organism Scientific: CLOSTRIDIUM STICKLANDII
    Organism Taxid: 1511

 Structural Features

(-) Chains, Units

  12345678
Asymmetric Unit : ABCDEFGH
Biological Unit 1 (1x): A   E   
Biological Unit 2 (1x):    D   H
Biological Unit 3 (1x):   C   G 
Biological Unit 4 (1x):  B   F  
Biological Unit 5 (1x): A C E G 
Biological Unit 6 (1x):  B D F H

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (3, 12)

Asymmetric Unit (3, 12)
No.NameCountTypeFull Name
15AD4Ligand/Ion5'-DEOXYADENOSINE
2B124Ligand/IonCOBALAMIN
3Z974Ligand/Ion(E)-N~5~-({3-HYDROXY-2-METHYL-5-[(PHOSPHONOOXY)METHYL]PYRIDIN-4-YL}METHYLIDENE)-L-ORNITHINE
Biological Unit 1 (3, 3)
No.NameCountTypeFull Name
15AD1Ligand/Ion5'-DEOXYADENOSINE
2B121Ligand/IonCOBALAMIN
3Z971Ligand/Ion(E)-N~5~-({3-HYDROXY-2-METHYL-5-[(PHOSPHONOOXY)METHYL]PYRIDIN-4-YL}METHYLIDENE)-L-ORNITHINE
Biological Unit 2 (3, 3)
No.NameCountTypeFull Name
15AD1Ligand/Ion5'-DEOXYADENOSINE
2B121Ligand/IonCOBALAMIN
3Z971Ligand/Ion(E)-N~5~-({3-HYDROXY-2-METHYL-5-[(PHOSPHONOOXY)METHYL]PYRIDIN-4-YL}METHYLIDENE)-L-ORNITHINE
Biological Unit 3 (3, 3)
No.NameCountTypeFull Name
15AD1Ligand/Ion5'-DEOXYADENOSINE
2B121Ligand/IonCOBALAMIN
3Z971Ligand/Ion(E)-N~5~-({3-HYDROXY-2-METHYL-5-[(PHOSPHONOOXY)METHYL]PYRIDIN-4-YL}METHYLIDENE)-L-ORNITHINE
Biological Unit 4 (3, 3)
No.NameCountTypeFull Name
15AD1Ligand/Ion5'-DEOXYADENOSINE
2B121Ligand/IonCOBALAMIN
3Z971Ligand/Ion(E)-N~5~-({3-HYDROXY-2-METHYL-5-[(PHOSPHONOOXY)METHYL]PYRIDIN-4-YL}METHYLIDENE)-L-ORNITHINE
Biological Unit 5 (3, 6)
No.NameCountTypeFull Name
15AD2Ligand/Ion5'-DEOXYADENOSINE
2B122Ligand/IonCOBALAMIN
3Z972Ligand/Ion(E)-N~5~-({3-HYDROXY-2-METHYL-5-[(PHOSPHONOOXY)METHYL]PYRIDIN-4-YL}METHYLIDENE)-L-ORNITHINE
Biological Unit 6 (3, 6)
No.NameCountTypeFull Name
15AD2Ligand/Ion5'-DEOXYADENOSINE
2B122Ligand/IonCOBALAMIN
3Z972Ligand/Ion(E)-N~5~-({3-HYDROXY-2-METHYL-5-[(PHOSPHONOOXY)METHYL]PYRIDIN-4-YL}METHYLIDENE)-L-ORNITHINE

(-) Sites  (12, 12)

Asymmetric Unit (12, 12)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREGLU A:615 , GLU A:617 , HIS A:618 , SER A:619 , VAL A:620 , GLY A:621 , VAL A:625 , SER A:667 , ILE A:669 , ILE A:670 , SER A:671 , HIS A:672 , GLY A:701 , GLY A:702 , THR A:703 , PHE A:719 , GLY A:722 , SER A:723 , VAL A:728 , TYR C:116 , ASP C:490 , 5AD C:1500BINDING SITE FOR RESIDUE B12 A 1801
02AC2SOFTWAREB12 A:1801 , LEU C:489BINDING SITE FOR RESIDUE 5AD C 1500
03AC3SOFTWARELYS A:629 , GLU C:81 , ARG C:109 , GLN C:113 , SER C:114 , TYR C:160 , SER C:162 , HIS C:182 , TYR C:187 , ARG C:192 , HIS C:225 , ASN C:226 , ARG C:297 , GLN C:299BINDING SITE FOR RESIDUE Z97 C 767
04AC4SOFTWARETYR B:116 , 5AD B:1500 , GLU D:617 , HIS D:618 , SER D:619 , VAL D:620 , GLY D:621 , LEU D:622 , GLU D:624 , VAL D:625 , ALA D:666 , SER D:667 , ILE D:669 , ILE D:670 , SER D:671 , HIS D:672 , GLY D:701 , GLY D:702 , THR D:703 , PHE D:719 , GLY D:720 , GLY D:722 , SER D:723 , VAL D:728BINDING SITE FOR RESIDUE B12 D 1801
05AC5SOFTWARELEU B:489 , ASP B:490 , B12 D:1801BINDING SITE FOR RESIDUE 5AD B 1500
06AC6SOFTWAREGLU A:81 , ARG A:109 , GLY A:112 , GLN A:113 , SER A:114 , TYR A:160 , SER A:162 , HIS A:182 , TYR A:187 , ARG A:192 , HIS A:225 , ASN A:226 , ARG A:297 , GLN A:299 , LYS C:629BINDING SITE FOR RESIDUE Z97 A 767
07AC7SOFTWARETYR A:116 , ASP A:490 , 5AD A:1500 , GLU C:615 , GLU C:617 , HIS C:618 , SER C:619 , VAL C:620 , GLY C:621 , LEU C:622 , SER C:667 , ILE C:669 , ILE C:670 , SER C:671 , HIS C:672 , GLY C:701 , GLY C:702 , THR C:703 , PHE C:719 , GLY C:720 , GLY C:722 , SER C:723 , VAL C:728BINDING SITE FOR RESIDUE B12 C 1801
08AC8SOFTWARELEU A:489 , ASP A:490 , B12 C:1801BINDING SITE FOR RESIDUE 5AD A 1500
09AC9SOFTWAREGLU B:81 , ILE B:108 , ARG B:109 , GLN B:113 , SER B:114 , TYR B:160 , SER B:162 , HIS B:182 , TYR B:187 , ARG B:192 , GLY B:223 , HIS B:225 , ASN B:226 , ARG B:297 , GLN B:299 , LYS D:629BINDING SITE FOR RESIDUE Z97 B 767
10BC1SOFTWAREGLU B:615 , ASP B:616 , GLU B:617 , HIS B:618 , SER B:619 , VAL B:620 , GLY B:621 , LEU B:665 , ALA B:666 , SER B:667 , ILE B:669 , ILE B:670 , SER B:671 , HIS B:672 , GLY B:701 , GLY B:702 , THR B:703 , PHE B:719 , GLY B:720 , SER B:723 , TYR D:116 , ASP D:490 , 5AD D:1500BINDING SITE FOR RESIDUE B12 B 1801
11BC2SOFTWAREB12 B:1801 , LEU D:489BINDING SITE FOR RESIDUE 5AD D 1500
12BC3SOFTWARELYS B:629 , GLU D:81 , ARG D:109 , GLY D:112 , GLN D:113 , SER D:114 , TYR D:160 , SER D:162 , HIS D:182 , TYR D:187 , ARG D:192 , HIS D:225 , ASN D:226 , ARG D:297 , GLN D:299BINDING SITE FOR RESIDUE Z97 D 767

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 3KOY)

(-) Cis Peptide Bonds  (12, 12)

Asymmetric Unit
No.Residues
1Pro A:272 -Pro A:273
2Tyr A:416 -Pro A:417
3Asp E:5 -Asp E:6
4Pro B:272 -Pro B:273
5Tyr B:416 -Pro B:417
6Asp F:5 -Asp F:6
7Pro C:272 -Pro C:273
8Tyr C:416 -Pro C:417
9Asp G:5 -Asp G:6
10Pro D:272 -Pro D:273
11Tyr D:416 -Pro D:417
12Asp H:5 -Asp H:6

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 3KOY)

(-) PROSITE Motifs  (1, 4)

Asymmetric Unit (1, 4)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1B12_BINDINGPS51332 B12-binding domain profile.OAME_ACESD602-739
 
 
 		  4A:605-740
B:605-740
C:605-740
D:605-740
Biological Unit 1 (1, 1)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1B12_BINDINGPS51332 B12-binding domain profile.OAME_ACESD602-739
 
 
 		  1A:605-740
-
-
-
Biological Unit 2 (1, 1)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1B12_BINDINGPS51332 B12-binding domain profile.OAME_ACESD602-739
 
 
 		  1-
-
-
D:605-740
Biological Unit 3 (1, 1)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1B12_BINDINGPS51332 B12-binding domain profile.OAME_ACESD602-739
 
 
 		  1-
-
C:605-740
-
Biological Unit 4 (1, 1)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1B12_BINDINGPS51332 B12-binding domain profile.OAME_ACESD602-739
 
 
 		  1-
B:605-740
-
-
Biological Unit 5 (1, 2)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1B12_BINDINGPS51332 B12-binding domain profile.OAME_ACESD602-739
 
 
 		  2A:605-740
-
C:605-740
-
Biological Unit 6 (1, 2)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1B12_BINDINGPS51332 B12-binding domain profile.OAME_ACESD602-739
 
 
 		  2-
B:605-740
-
D:605-740

(-) Exons   (0, 0)

(no "Exon" information available for 3KOY)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:728
 aligned with OAME_ACESD | E3PY95 from UniProtKB/Swiss-Prot  Length:740

    Alignment length:733
                                    14        24        34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334       344       354       364       374       384       394       404       414       424       434       444       454       464       474       484       494       504       514       524       534       544       554       564       574       584       594       604       614       624       634       644       654       664       674       684       694       704       714       724       734   
           OAME_ACESD     5 LQLRVNEKLDVENILKDLDKYTPKRRGWTWRQPAENLQMGPFIYKDASTPLENSVALPSAKYFGDIDPQPLPVITTEIASGRFEDDIRRMRMAAWHGADHIMVIRTAGQSHYDGLIEGTPQGIGGVPITRKQVRAQRKALDLIEEEVGRPINYHSYVSGVAGPDIAVMFAEEGVNGAHQDPQYNVLYRNINMIRSFIDACESKTIMAWADMAQIDGAHNANATAREAWKVMPELMVQHALNSIFSLKVGMKKSNICLSTVPPTAPPAPSMYLDLPYAVALREMFEGYRMRAQMNTKYMEASTREATVTHVLNLLISKLTRADIQSTITPDEGRNVPWHIYNIEACDTAKQALIGMDGLMDMVQLKREGVLGDTVRELKERAVLFMEEIIEAGGYFNAVEQGFFVDSGYYPERNGDGIARQINGGIGAGTVFERDEDYMAPVTAHFGYNNVKQYDEALVSEPSKLIDGCTLEVPEKIVYIDELDENDNVNVRMEETKEFRHSSMIKPEVEWQADGTVLLTMFLPTSKRVAEFAAIEFAKKMNLEEVEVINREVMQEAEGTRIELKGRVPFSIDINSLVIPPEPEILSEDEIREDIEKTPLKIVAATVGEDEHSVGLREVIDIKHGGIEKYGVEVHYLGTSVPVEKLVDAAIELKADAILASTIISHDDIHYKNMKRIHELAVEKGIRDKIMIGCGGTQVTPEVAVKQGVDAGFGRGSKGIHVATFLVKKRREMR 737
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .........hhhhhhhhhhhh...............eee..eee..ee........hhhhhhhh....ee..eeeee....hhhhhhhhhhhhhhh...eee.....hhhhh................hhhhhhhhhhhhhhhhhhhh...eeeee....hhhhhhhhhhhh...eee.hhhhhhhhhh.hhhhhhhhhhhhhhhhhhh..eee..hhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhh.....eeeee........hhhhhhhhhhhhhhhhh...eeee.........hhhhhhhhhhhhhhhhhhh...ee............hhhhhhhhhhhhhhhhhhh.hhhh.eee...hhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhh..............................ee.....................hhhhh...hhhhh.....hhhhh..........hhhhhhhhhhhhh--.............eeeeeeee..hhhhhhhhhhhhhhh...eeeeeeeeeeee...eeeeeeeee..............---..hhhhhhhhhhhh..eeeeee......hhhhhhhhhhhhhhhhhhh.eeee.....hhhhhhhhhhhhh..eeeee...hhhhhhhhhhhhhhhhhhh.......eeeee.....hhhhhh....eee....hhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------B12_BINDING  PDB: A:605-740 UniProt: 602-739                                                                                             PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3koy A   5 LQLRVNEKLDVENILKDLDKYTPKRRGWTWRQPAENLQMGPFIYKDASTPLENSVALPSAKYFGDIDPQPLPVITTEIASGRFEDDIRRMRMAAWHGADHIMVIRTAGQSHYDGLIEGTPQGIGGVPITRKQVRAQRKALDLIEEEVGRPINYHSYVSGVAGPDIAVMFAEEGVNGAHQDPQYNVLYRNINMIRSFIDACESKTIMAWADMAQIDGAHNANATAREAWKVMPELMVQHALNSIFSLKVGMKKSNICLSTVPPTAPPAPSMYLDLPYAVALREMFEGYRMRAQMNTKYMEASTREATVTHVLNLLISKLTRADIQSTITPDEGRNVPWHIYNIEACDTAKQALIGMDGLMDMVQLKREGVLGDTVRELKERAVLFMEEIIEAGGYFNAVEQGFFVDSGYYPERNGDGIARQINGGIGAGTVFERDEDYMAPVTAHFGYNNVKQYDEALVSEPSKLIDGCTLEVPEKIVYIDELDENDNVNVRMEETKEFR--SMIKPEVEWQADGTVLLTMFLPTSKRVAEFAAIEFAKKMNLEEVEVINREVMQEAEGTRIELKGRVPFSIDINSLVIPP---ILSEDEIREDIEKTPLKIVAATVGEDEHSVGLREVIDIKHGGIEKYGVEVHYLGTSVPVEKLVDAAIELKADAILASTIISHDDIHYKNMKRIHELAVEKGIRDKIMIGCGGTQVTPEVAVKQGVDAGFGRGSKGIHVATFLVKKRREMR 740
                                    14        24        34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214    || 227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457       467       477       487       497        |- |     517       527       537       547       557       567       577       587   |   597       607       617       627       637       647       657       667       677       687       697       707       717       727       737   
                                                                                                                                                                                                                                                219|                                                                                                                                                                                                                                                                                        506  |                                                                           587 591                                                                                                                                                     
                                                                                                                                                                                                                                                 223                                                                                                                                                                                                                                                                                           509                                                                                                                                                                                                                                       


Chain B from PDB  Type:PROTEIN  Length:728
 aligned with OAME_ACESD | E3PY95 from UniProtKB/Swiss-Prot  Length:740

    Alignment length:733
                                    14        24        34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334       344       354       364       374       384       394       404       414       424       434       444       454       464       474       484       494       504       514       524       534       544       554       564       574       584       594       604       614       624       634       644       654       664       674       684       694       704       714       724       734   
           OAME_ACESD     5 LQLRVNEKLDVENILKDLDKYTPKRRGWTWRQPAENLQMGPFIYKDASTPLENSVALPSAKYFGDIDPQPLPVITTEIASGRFEDDIRRMRMAAWHGADHIMVIRTAGQSHYDGLIEGTPQGIGGVPITRKQVRAQRKALDLIEEEVGRPINYHSYVSGVAGPDIAVMFAEEGVNGAHQDPQYNVLYRNINMIRSFIDACESKTIMAWADMAQIDGAHNANATAREAWKVMPELMVQHALNSIFSLKVGMKKSNICLSTVPPTAPPAPSMYLDLPYAVALREMFEGYRMRAQMNTKYMEASTREATVTHVLNLLISKLTRADIQSTITPDEGRNVPWHIYNIEACDTAKQALIGMDGLMDMVQLKREGVLGDTVRELKERAVLFMEEIIEAGGYFNAVEQGFFVDSGYYPERNGDGIARQINGGIGAGTVFERDEDYMAPVTAHFGYNNVKQYDEALVSEPSKLIDGCTLEVPEKIVYIDELDENDNVNVRMEETKEFRHSSMIKPEVEWQADGTVLLTMFLPTSKRVAEFAAIEFAKKMNLEEVEVINREVMQEAEGTRIELKGRVPFSIDINSLVIPPEPEILSEDEIREDIEKTPLKIVAATVGEDEHSVGLREVIDIKHGGIEKYGVEVHYLGTSVPVEKLVDAAIELKADAILASTIISHDDIHYKNMKRIHELAVEKGIRDKIMIGCGGTQVTPEVAVKQGVDAGFGRGSKGIHVATFLVKKRREMR 737
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .........hhhhhh.hhhhh...........ee..eee..eee..ee........hhhhhhhh....ee..eeeee....hhhhhhhhhhhhhhhh..eee.....hhhhh................hhhhhhhhhhhhhhhhhhhh...eeeee....hhhhhhhhhhhh...eee.hhhhhhhh...hhhhhhhhhhhhhhhhhhh..eee...hhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhh.hhh.eeeee........hhhhhhhhhhhhhhhhh...eeee.........hhhhhhhhhhhhhhhhhhh...ee............hhhhhhhhhhhhhhhhhhh.hhhh.eee...hhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhh..............................ee.............................hhhhh.....hhhhh..........hhhhhhhhhhhhh--.ee..........eeeeeeee..hhhhhhhhhhhhhhh...eeeeeeeeeeee...eeeeeeeee....ee.hhh....---..hhhhhhhhhhhh..eeeeee......hhhhhhhhhhhhhhhhhhh.eeee.....hhhhhhhhhhhh...eeeee......hhhhhhhhhhhhhhhh.......eeeee...............eee....hhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------B12_BINDING  PDB: B:605-740 UniProt: 602-739                                                                                             PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3koy B   5 LQLRVNEKLDVENILKDLDKYTPKRRGWTWRQPAENLQMGPFIYKDASTPLENSVALPSAKYFGDIDPQPLPVITTEIASGRFEDDIRRMRMAAWHGADHIMVIRTAGQSHYDGLIEGTPQGIGGVPITRKQVRAQRKALDLIEEEVGRPINYHSYVSGVAGPDIAVMFAEEGVNGAHQDPQYNVLYRNINMIRSFIDACESKTIMAWADMAQIDGAHNANATAREAWKVMPELMVQHALNSIFSLKVGMKKSNICLSTVPPTAPPAPSMYLDLPYAVALREMFEGYRMRAQMNTKYMEASTREATVTHVLNLLISKLTRADIQSTITPDEGRNVPWHIYNIEACDTAKQALIGMDGLMDMVQLKREGVLGDTVRELKERAVLFMEEIIEAGGYFNAVEQGFFVDSGYYPERNGDGIARQINGGIGAGTVFERDEDYMAPVTAHFGYNNVKQYDEALVSEPSKLIDGCTLEVPEKIVYIDELDENDNVNVRMEETKEFR--SMIKPEVEWQADGTVLLTMFLPTSKRVAEFAAIEFAKKMNLEEVEVINREVMQEAEGTRIELKGRVPFSIDINSLVIPP---ILSEDEIREDIEKTPLKIVAATVGEDEHSVGLREVIDIKHGGIEKYGVEVHYLGTSVPVEKLVDAAIELKADAILASTIISHDDIHYKNMKRIHELAVEKGIRDKIMIGCGGTQVTPEVAVKQGVDAGFGRGSKGIHVATFLVKKRREMR 740
                                    14        24        34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214    || 227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457       467       477       487       497        |- |     517       527       537       547       557       567       577       587   |   597       607       617       627       637       647       657       667       677       687       697       707       717       727       737   
                                                                                                                                                                                                                                                219|                                                                                                                                                                                                                                                                                        506  |                                                                           587 591                                                                                                                                                     
                                                                                                                                                                                                                                                 223                                                                                                                                                                                                                                                                                           509                                                                                                                                                                                                                                       


Chain C from PDB  Type:PROTEIN  Length:728
 aligned with OAME_ACESD | E3PY95 from UniProtKB/Swiss-Prot  Length:740

    Alignment length:733
                                    14        24        34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334       344       354       364       374       384       394       404       414       424       434       444       454       464       474       484       494       504       514       524       534       544       554       564       574       584       594       604       614       624       634       644       654       664       674       684       694       704       714       724       734   
           OAME_ACESD     5 LQLRVNEKLDVENILKDLDKYTPKRRGWTWRQPAENLQMGPFIYKDASTPLENSVALPSAKYFGDIDPQPLPVITTEIASGRFEDDIRRMRMAAWHGADHIMVIRTAGQSHYDGLIEGTPQGIGGVPITRKQVRAQRKALDLIEEEVGRPINYHSYVSGVAGPDIAVMFAEEGVNGAHQDPQYNVLYRNINMIRSFIDACESKTIMAWADMAQIDGAHNANATAREAWKVMPELMVQHALNSIFSLKVGMKKSNICLSTVPPTAPPAPSMYLDLPYAVALREMFEGYRMRAQMNTKYMEASTREATVTHVLNLLISKLTRADIQSTITPDEGRNVPWHIYNIEACDTAKQALIGMDGLMDMVQLKREGVLGDTVRELKERAVLFMEEIIEAGGYFNAVEQGFFVDSGYYPERNGDGIARQINGGIGAGTVFERDEDYMAPVTAHFGYNNVKQYDEALVSEPSKLIDGCTLEVPEKIVYIDELDENDNVNVRMEETKEFRHSSMIKPEVEWQADGTVLLTMFLPTSKRVAEFAAIEFAKKMNLEEVEVINREVMQEAEGTRIELKGRVPFSIDINSLVIPPEPEILSEDEIREDIEKTPLKIVAATVGEDEHSVGLREVIDIKHGGIEKYGVEVHYLGTSVPVEKLVDAAIELKADAILASTIISHDDIHYKNMKRIHELAVEKGIRDKIMIGCGGTQVTPEVAVKQGVDAGFGRGSKGIHVATFLVKKRREMR 737
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .........hhhhhhhhhhhh...............eee..eee..ee........hhhhhhhh....ee..eeeee....hhhhhhhhhhhhhhh...eee.....hhhhh................hhhhhhhhhhhhhhhhhhhh...eeeee....hhhhhhhhhhhh...eee.hhhhhhhhhh.hhhhhhhhhhhhhhhhhhh..eee..hhhhhhhh.....hhhhhhhhhhhhhhhhhhhh.....eeeee........hhhhhhhhhhhhhhhhh...eeee.........hhhhhhhhhhhhhhhhhhh...eee...........hhhhhhhhhhhhhhhhhhhhhhhh.eee...hhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhh..............................ee.....................hhhhh...hhhhh.....hhhhh..........hhhhhhhh.....--.ee..........eeeeeeee..hhhhhhhhhhhhhhh...eeeeeeeeeeee...eeeeeeeee....ee.hhh....---..hhhhhhhhhhhh..eeeeee......hhhhhhhhhhhhhhhhhhh.eeee.....hhhhhhhhhhhh...eeeee...hhhhhhhhhhhhhhhhhhh..hhhhheeeee....hhhhhhhh...eee....hhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------B12_BINDING  PDB: C:605-740 UniProt: 602-739                                                                                             PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3koy C   5 LQLRVNEKLDVENILKDLDKYTPKRRGWTWRQPAENLQMGPFIYKDASTPLENSVALPSAKYFGDIDPQPLPVITTEIASGRFEDDIRRMRMAAWHGADHIMVIRTAGQSHYDGLIEGTPQGIGGVPITRKQVRAQRKALDLIEEEVGRPINYHSYVSGVAGPDIAVMFAEEGVNGAHQDPQYNVLYRNINMIRSFIDACESKTIMAWADMAQIDGAHNANATAREAWKVMPELMVQHALNSIFSLKVGMKKSNICLSTVPPTAPPAPSMYLDLPYAVALREMFEGYRMRAQMNTKYMEASTREATVTHVLNLLISKLTRADIQSTITPDEGRNVPWHIYNIEACDTAKQALIGMDGLMDMVQLKREGVLGDTVRELKERAVLFMEEIIEAGGYFNAVEQGFFVDSGYYPERNGDGIARQINGGIGAGTVFERDEDYMAPVTAHFGYNNVKQYDEALVSEPSKLIDGCTLEVPEKIVYIDELDENDNVNVRMEETKEFR--SMIKPEVEWQADGTVLLTMFLPTSKRVAEFAAIEFAKKMNLEEVEVINREVMQEAEGTRIELKGRVPFSIDINSLVIPP---ILSEDEIREDIEKTPLKIVAATVGEDEHSVGLREVIDIKHGGIEKYGVEVHYLGTSVPVEKLVDAAIELKADAILASTIISHDDIHYKNMKRIHELAVEKGIRDKIMIGCGGTQVTPEVAVKQGVDAGFGRGSKGIHVATFLVKKRREMR 740
                                    14        24        34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214    || 227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457       467       477       487       497        |- |     517       527       537       547       557       567       577       587   |   597       607       617       627       637       647       657       667       677       687       697       707       717       727       737   
                                                                                                                                                                                                                                                219|                                                                                                                                                                                                                                                                                        506  |                                                                           587 591                                                                                                                                                     
                                                                                                                                                                                                                                                 223                                                                                                                                                                                                                                                                                           509                                                                                                                                                                                                                                       


Chain D from PDB  Type:PROTEIN  Length:728
 aligned with OAME_ACESD | E3PY95 from UniProtKB/Swiss-Prot  Length:740

    Alignment length:733
                                    14        24        34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334       344       354       364       374       384       394       404       414       424       434       444       454       464       474       484       494       504       514       524       534       544       554       564       574       584       594       604       614       624       634       644       654       664       674       684       694       704       714       724       734   
           OAME_ACESD     5 LQLRVNEKLDVENILKDLDKYTPKRRGWTWRQPAENLQMGPFIYKDASTPLENSVALPSAKYFGDIDPQPLPVITTEIASGRFEDDIRRMRMAAWHGADHIMVIRTAGQSHYDGLIEGTPQGIGGVPITRKQVRAQRKALDLIEEEVGRPINYHSYVSGVAGPDIAVMFAEEGVNGAHQDPQYNVLYRNINMIRSFIDACESKTIMAWADMAQIDGAHNANATAREAWKVMPELMVQHALNSIFSLKVGMKKSNICLSTVPPTAPPAPSMYLDLPYAVALREMFEGYRMRAQMNTKYMEASTREATVTHVLNLLISKLTRADIQSTITPDEGRNVPWHIYNIEACDTAKQALIGMDGLMDMVQLKREGVLGDTVRELKERAVLFMEEIIEAGGYFNAVEQGFFVDSGYYPERNGDGIARQINGGIGAGTVFERDEDYMAPVTAHFGYNNVKQYDEALVSEPSKLIDGCTLEVPEKIVYIDELDENDNVNVRMEETKEFRHSSMIKPEVEWQADGTVLLTMFLPTSKRVAEFAAIEFAKKMNLEEVEVINREVMQEAEGTRIELKGRVPFSIDINSLVIPPEPEILSEDEIREDIEKTPLKIVAATVGEDEHSVGLREVIDIKHGGIEKYGVEVHYLGTSVPVEKLVDAAIELKADAILASTIISHDDIHYKNMKRIHELAVEKGIRDKIMIGCGGTQVTPEVAVKQGVDAGFGRGSKGIHVATFLVKKRREMR 737
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .........hhhhhh.....................eee..eee..ee........hhhhhhhh....ee..eeeee....hhhhhhhhhhhhhhh...eee.....hhhhh................hhhhhhhhhhhhhhhhhhhh...eeeee....hhhhhhhhhhhh...eee.hhhhhhhhhh.hhhhhhhhhhhhhhhhhhh..eee...hhhhhh..hhhhhhhhhhhhhhhhhhhhhhhh.hhh.eeeee........hhhhhhhhhhhhhhhhh...eeee.........hhhhhhhhhhhhhhhhhhh...eee...........hhhhhhhhhhhhhhhhhhh.hhhh.eee...hhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhh..............................ee.....................hhhhh.hhhhhhh.....hhhhh..........hhhhhhhhhhhhh--.ee..........eeeeeeee..hhhhhhhhhhhhhhhh..eeeeeeeeeeee...eeeeeeeee....ee.hhh....---....hhhhhhhhhh..eeeeeee.....hhhhhhhhh....hhhhhh.eeeeeeeee..hhhhhhhhhh...eeeee...hhhhhhhhhhhhhhhhhhhh.......eeee....hhhhhh.....eee....hhhhhhhhhhhhh.... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------B12_BINDING  PDB: D:605-740 UniProt: 602-739                                                                                             PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3koy D   5 LQLRVNEKLDVENILKDLDKYTPKRRGWTWRQPAENLQMGPFIYKDASTPLENSVALPSAKYFGDIDPQPLPVITTEIASGRFEDDIRRMRMAAWHGADHIMVIRTAGQSHYDGLIEGTPQGIGGVPITRKQVRAQRKALDLIEEEVGRPINYHSYVSGVAGPDIAVMFAEEGVNGAHQDPQYNVLYRNINMIRSFIDACESKTIMAWADMAQIDGAHNANATAREAWKVMPELMVQHALNSIFSLKVGMKKSNICLSTVPPTAPPAPSMYLDLPYAVALREMFEGYRMRAQMNTKYMEASTREATVTHVLNLLISKLTRADIQSTITPDEGRNVPWHIYNIEACDTAKQALIGMDGLMDMVQLKREGVLGDTVRELKERAVLFMEEIIEAGGYFNAVEQGFFVDSGYYPERNGDGIARQINGGIGAGTVFERDEDYMAPVTAHFGYNNVKQYDEALVSEPSKLIDGCTLEVPEKIVYIDELDENDNVNVRMEETKEFR--SMIKPEVEWQADGTVLLTMFLPTSKRVAEFAAIEFAKKMNLEEVEVINREVMQEAEGTRIELKGRVPFSIDINSLVIPP---ILSEDEIREDIEKTPLKIVAATVGEDEHSVGLREVIDIKHGGIEKYGVEVHYLGTSVPVEKLVDAAIELKADAILASTIISHDDIHYKNMKRIHELAVEKGIRDKIMIGCGGTQVTPEVAVKQGVDAGFGRGSKGIHVATFLVKKRREMR 740
                                    14        24        34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214    || 227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457       467       477       487       497        |- |     517       527       537       547       557       567       577       587   |   597       607       617       627       637       647       657       667       677       687       697       707       717       727       737   
                                                                                                                                                                                                                                                219|                                                                                                                                                                                                                                                                                        506  |                                                                           587 591                                                                                                                                                     
                                                                                                                                                                                                                                                 223                                                                                                                                                                                                                                                                                           509                                                                                                                                                                                                                                       


Chain E from PDB  Type:PROTEIN  Length:110
 aligned with OAMS_ACESD | E3PY96 from UniProtKB/Swiss-Prot  Length:121

    Alignment length:110
                                    14        24        34        44        54        64        74        84        94       104       114
           OAMS_ACESD     5 DDFQQRRAHLANLSDEELQTRFWEMAEKIVDPLLDLGKKNTTPSIERSVLLRMGFSSLEAKAIVDKTMDRGLMGKGAGHIVYKIAKEKNISVREAGLALSEGKYWDDAIQ 114
               SCOP domains -------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhheehhhhhhhhhhhh..hhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhh..hhhhhhhhhh...hhhhhh. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------- Transcript
                 3koy E   5 DDFQQRRAHLANLSDEELQTRFWEMAEKIVDPLLDLGKKNTTPSIERSVLLRMGFSSLEAKAIVDKTMDRGLMGKGAGHIVYKIAKEKNISVREAGLALSEGKYWDDAIQ 114
                                    14        24        34        44        54        64        74        84        94       104       114


Chain F from PDB  Type:PROTEIN  Length:110
 aligned with OAMS_ACESD | E3PY96 from UniProtKB/Swiss-Prot  Length:121

    Alignment length:110
                                    14        24        34        44        54        64        74        84        94       104       114
           OAMS_ACESD     5 DDFQQRRAHLANLSDEELQTRFWEMAEKIVDPLLDLGKKNTTPSIERSVLLRMGFSSLEAKAIVDKTMDRGLMGKGAGHIVYKIAKEKNISVREAGLALSEGKYWDDAIQ 114
               SCOP domains -------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhheehhhhhhhhhhhh..hhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhh.hhhhhhhhhh...hhhhhh. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------- Transcript
                 3koy F   5 DDFQQRRAHLANLSDEELQTRFWEMAEKIVDPLLDLGKKNTTPSIERSVLLRMGFSSLEAKAIVDKTMDRGLMGKGAGHIVYKIAKEKNISVREAGLALSEGKYWDDAIQ 114
                                    14        24        34        44        54        64        74        84        94       104       114


Chain G from PDB  Type:PROTEIN  Length:110
 aligned with OAMS_ACESD | E3PY96 from UniProtKB/Swiss-Prot  Length:121

    Alignment length:110
                                    14        24        34        44        54        64        74        84        94       104       114
           OAMS_ACESD     5 DDFQQRRAHLANLSDEELQTRFWEMAEKIVDPLLDLGKKNTTPSIERSVLLRMGFSSLEAKAIVDKTMDRGLMGKGAGHIVYKIAKEKNISVREAGLALSEGKYWDDAIQ 114
               SCOP domains -------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhheehhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhh..hhhhhh. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------- Transcript
                 3koy G   5 DDFQQRRAHLANLSDEELQTRFWEMAEKIVDPLLDLGKKNTTPSIERSVLLRMGFSSLEAKAIVDKTMDRGLMGKGAGHIVYKIAKEKNISVREAGLALSEGKYWDDAIQ 114
                                    14        24        34        44        54        64        74        84        94       104       114


Chain H from PDB  Type:PROTEIN  Length:110
 aligned with OAMS_ACESD | E3PY96 from UniProtKB/Swiss-Prot  Length:121

    Alignment length:110
                                    14        24        34        44        54        64        74        84        94       104       114
           OAMS_ACESD     5 DDFQQRRAHLANLSDEELQTRFWEMAEKIVDPLLDLGKKNTTPSIERSVLLRMGFSSLEAKAIVDKTMDRGLMGKGAGHIVYKIAKEKNISVREAGLALSEGKYWDDAIQ 114
               SCOP domains -------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhheehhhhhhhhhhhhh.hhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhh..hhhhhhhhhh...hhhhhh. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------- Transcript
                 3koy H   5 DDFQQRRAHLANLSDEELQTRFWEMAEKIVDPLLDLGKKNTTPSIERSVLLRMGFSSLEAKAIVDKTMDRGLMGKGAGHIVYKIAKEKNISVREAGLALSEGKYWDDAIQ 114
                                    14        24        34        44        54        64        74        84        94       104       114
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 3KOY)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 3KOY)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 3KOY)

(-) Gene Ontology  (7, 12)

Asymmetric Unit(hide GO term definitions)
Chain A,B,C,D   (OAME_ACESD | E3PY95)
molecular function
    GO:0047831    D-ornithine 4,5-aminomutase activity    Catalysis of the reaction: D-ornithine = (2R,4S)-2,4-diaminopentanoate.
    GO:0003824    catalytic activity    Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
    GO:0031419    cobalamin binding    Interacting selectively and non-covalently with cobalamin (vitamin B12), a water-soluble vitamin characterized by possession of a corrin nucleus containing a cobalt atom.
    GO:0016853    isomerase activity    Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5.
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.
    GO:0046983    protein dimerization activity    The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits.
biological process
    GO:0008152    metabolic process    The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.

Chain E,F,G,H   (OAMS_ACESD | E3PY96)
molecular function
    GO:0047831    D-ornithine 4,5-aminomutase activity    Catalysis of the reaction: D-ornithine = (2R,4S)-2,4-diaminopentanoate.
    GO:0003824    catalytic activity    Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
    GO:0031419    cobalamin binding    Interacting selectively and non-covalently with cobalamin (vitamin B12), a water-soluble vitamin characterized by possession of a corrin nucleus containing a cobalt atom.
    GO:0016853    isomerase activity    Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5.
biological process
    GO:0008152    metabolic process    The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.

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  3koy
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        OAME_ACESD | E3PY95: 3kow 3kox 3koz 3kp0 3kp1
        OAMS_ACESD | E3PY96: 3kow 3kox 3koz 3kp0 3kp1

(-) Related Entries Specified in the PDB File

3kow CRYSTAL STRUCTURE OF ORNITHINE 4,5 AMINOMUTASE BACKSOAKED COMPLEX
3kox CRYSTAL STRUCTURE OF ORNITHINE 4,5 AMINOMUTASE IN COMPLEX WITH 2,4-DIAMINOBUTYRATE (ANAEROBIC)
3koz CRYSTAL STRUCTURE OF ORNITHINE 4,5 AMINOMUTASE IN COMPLEX WITH ORNITHINE (ANAEROBIC)
3kp0 CRYSTAL STRUCTURE OF ORNITHINE 4,5 AMINOMUTASE IN COMPLEX WITH 2,4-DIAMINOBUTYRATE (DAB) (AEROBIC)
3kp1 CRYSTAL STRUCTURE OF ORNITHINE 4,5 AMINOMUTASE (RESTING STATE)