Chain A from PDB Type:PROTEIN Length:227
aligned with PSA_THEAC | P25156 from UniProtKB/Swiss-Prot Length:233
Alignment length:227
16 26 36 46 56 66 76 86 96 106 116 126 136 146 156 166 176 186 196 206 216 226
PSA_THEAC 7 AYDRAITVFSPDGRLFQVEYAREAVKKGSTALGMKFANGVLLISDKKVRSRLIEQNSIEKIQLIDDYVAAVTSGLVADARVLVDFARISAQQEKVTYGSLVNIENLVKRVADQMQQYTQYGGVRPYGVSLIFAGIDQIGPRLFDCDPAGTINEYKATAIGSGKDAVVSFLEREYKENLPEKEAVTLGIKALKSSLEEGEELKAPEIASITVGNKYRIYDQEEVKKFL 233
SCOP domains d3jrma_ A: automated matches SCOP domains
CATH domains 3jrmA00 A:7-233 Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..............hhhhhhhhhhhhh...eeeeee..eeeeee................eeeee..eeeeeeehhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhh..........eeeeeeee....eeeeee.....eee..eeee..hhhhhhhhhhhhh....hhhhhhhhhhhhhhh...........eeeeee.....ee.hhhhhhh.. Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (1) -PROTEASOME_ALPHA_1 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (1)
PROSITE (2) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
PROSITE (3) ----------------PROTEASOME_ALPHA_2 PDB: A:23-233 UniProt: 23-233 PROSITE (3)
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3jrm A 7 AYDRAITVFSPDGRLFQVEYAREAVKKGSTALGMKFANGVLLISDKKVRSRLIEQNSIEKIQLIDDYVAAVTSGLVADARVLVDFARISAQQEKVTYGSLVNIENLVKRVADQMQQYTQYGGVRPYGVSLIFAGIDQIGPRLFDCDPAGTINEYKATAIGSGKDAVVSFLEREYKENLPEKEAVTLGIKALKSSLEEGEELKAPEIASITVGNKYRIYDQEEVKKFL 233
16 26 36 46 56 66 76 86 96 106 116 126 136 146 156 166 176 186 196 206 216 226
Chain B from PDB Type:PROTEIN Length:227
aligned with PSA_THEAC | P25156 from UniProtKB/Swiss-Prot Length:233
Alignment length:227
16 26 36 46 56 66 76 86 96 106 116 126 136 146 156 166 176 186 196 206 216 226
PSA_THEAC 7 AYDRAITVFSPDGRLFQVEYAREAVKKGSTALGMKFANGVLLISDKKVRSRLIEQNSIEKIQLIDDYVAAVTSGLVADARVLVDFARISAQQEKVTYGSLVNIENLVKRVADQMQQYTQYGGVRPYGVSLIFAGIDQIGPRLFDCDPAGTINEYKATAIGSGKDAVVSFLEREYKENLPEKEAVTLGIKALKSSLEEGEELKAPEIASITVGNKYRIYDQEEVKKFL 233
SCOP domains d3jrmb_ B: automated matches SCOP domains
CATH domains 3jrmB00 B:7-233 Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..............hhhhhhhhhhhhh...eeeeee..eeeeee................eeeee..eeeeeeehhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhh..........eeeeeeee....eeeeee.....eee..eeee..hhhhhhhhhhhhh....hhhhhhhhhhhhhhh...........eeeeee.....ee.hhhhhhh.. Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (1) -PROTEASOME_ALPHA_1 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (1)
PROSITE (2) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
PROSITE (3) ----------------PROTEASOME_ALPHA_2 PDB: B:23-233 UniProt: 23-233 PROSITE (3)
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3jrm B 7 AYDRAITVFSPDGRLFQVEYAREAVKKGSTALGMKFANGVLLISDKKVRSRLIEQNSIEKIQLIDDYVAAVTSGLVADARVLVDFARISAQQEKVTYGSLVNIENLVKRVADQMQQYTQYGGVRPYGVSLIFAGIDQIGPRLFDCDPAGTINEYKATAIGSGKDAVVSFLEREYKENLPEKEAVTLGIKALKSSLEEGEELKAPEIASITVGNKYRIYDQEEVKKFL 233
16 26 36 46 56 66 76 86 96 106 116 126 136 146 156 166 176 186 196 206 216 226
Chain C from PDB Type:PROTEIN Length:227
aligned with PSA_THEAC | P25156 from UniProtKB/Swiss-Prot Length:233
Alignment length:227
16 26 36 46 56 66 76 86 96 106 116 126 136 146 156 166 176 186 196 206 216 226
PSA_THEAC 7 AYDRAITVFSPDGRLFQVEYAREAVKKGSTALGMKFANGVLLISDKKVRSRLIEQNSIEKIQLIDDYVAAVTSGLVADARVLVDFARISAQQEKVTYGSLVNIENLVKRVADQMQQYTQYGGVRPYGVSLIFAGIDQIGPRLFDCDPAGTINEYKATAIGSGKDAVVSFLEREYKENLPEKEAVTLGIKALKSSLEEGEELKAPEIASITVGNKYRIYDQEEVKKFL 233
SCOP domains d3jrmc_ C: automated matches SCOP domains
CATH domains 3jrmC00 C:7-233 Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..............hhhhhhhhhhhhh...eeeeee..eeeeee.................ee....eeeeeeehhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhh..........eeeeeeee....eeeeee.....eee..eeee..hhhhhhhhhhhhh....hhhhhhhhhhhhhhh...........eeeeee.....ee.hhhhhhh.. Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (1) -PROTEASOME_ALPHA_1 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (1)
PROSITE (2) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
PROSITE (3) ----------------PROTEASOME_ALPHA_2 PDB: C:23-233 UniProt: 23-233 PROSITE (3)
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3jrm C 7 AYDRAITVFSPDGRLFQVEYAREAVKKGSTALGMKFANGVLLISDKKVRSRLIEQNSIEKIQLIDDYVAAVTSGLVADARVLVDFARISAQQEKVTYGSLVNIENLVKRVADQMQQYTQYGGVRPYGVSLIFAGIDQIGPRLFDCDPAGTINEYKATAIGSGKDAVVSFLEREYKENLPEKEAVTLGIKALKSSLEEGEELKAPEIASITVGNKYRIYDQEEVKKFL 233
16 26 36 46 56 66 76 86 96 106 116 126 136 146 156 166 176 186 196 206 216 226
Chain D from PDB Type:PROTEIN Length:227
aligned with PSA_THEAC | P25156 from UniProtKB/Swiss-Prot Length:233
Alignment length:227
16 26 36 46 56 66 76 86 96 106 116 126 136 146 156 166 176 186 196 206 216 226
PSA_THEAC 7 AYDRAITVFSPDGRLFQVEYAREAVKKGSTALGMKFANGVLLISDKKVRSRLIEQNSIEKIQLIDDYVAAVTSGLVADARVLVDFARISAQQEKVTYGSLVNIENLVKRVADQMQQYTQYGGVRPYGVSLIFAGIDQIGPRLFDCDPAGTINEYKATAIGSGKDAVVSFLEREYKENLPEKEAVTLGIKALKSSLEEGEELKAPEIASITVGNKYRIYDQEEVKKFL 233
SCOP domains d3jrmd_ D: automated matches SCOP domains
CATH domains 3jrmD00 D:7-233 Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..............hhhhhhhhhhhhh...eeeeee..eeeeee.................eeee..eeeeeeehhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhh..........eeeeeeee....eeeeee.....eee..eeee..hhhhhhhhhhhhh....hhhhhhhhhhhhhhh...........eeeeee.....ee.hhhhhhh.. Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (1) -PROTEASOME_ALPHA_1 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (1)
PROSITE (2) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
PROSITE (3) ----------------PROTEASOME_ALPHA_2 PDB: D:23-233 UniProt: 23-233 PROSITE (3)
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3jrm D 7 AYDRAITVFSPDGRLFQVEYAREAVKKGSTALGMKFANGVLLISDKKVRSRLIEQNSIEKIQLIDDYVAAVTSGLVADARVLVDFARISAQQEKVTYGSLVNIENLVKRVADQMQQYTQYGGVRPYGVSLIFAGIDQIGPRLFDCDPAGTINEYKATAIGSGKDAVVSFLEREYKENLPEKEAVTLGIKALKSSLEEGEELKAPEIASITVGNKYRIYDQEEVKKFL 233
16 26 36 46 56 66 76 86 96 106 116 126 136 146 156 166 176 186 196 206 216 226
Chain E from PDB Type:PROTEIN Length:227
aligned with PSA_THEAC | P25156 from UniProtKB/Swiss-Prot Length:233
Alignment length:227
16 26 36 46 56 66 76 86 96 106 116 126 136 146 156 166 176 186 196 206 216 226
PSA_THEAC 7 AYDRAITVFSPDGRLFQVEYAREAVKKGSTALGMKFANGVLLISDKKVRSRLIEQNSIEKIQLIDDYVAAVTSGLVADARVLVDFARISAQQEKVTYGSLVNIENLVKRVADQMQQYTQYGGVRPYGVSLIFAGIDQIGPRLFDCDPAGTINEYKATAIGSGKDAVVSFLEREYKENLPEKEAVTLGIKALKSSLEEGEELKAPEIASITVGNKYRIYDQEEVKKFL 233
SCOP domains d3jrme_ E: automated matches SCOP domains
CATH domains 3jrmE00 E:7-233 Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..............hhhhhhhhhhhhh...eeeeee..eeeeee................eee....eeeeeeehhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhh..........eeeeeeee....eeeeee.....eee..eeee..hhhhhhhhhhhhh....hhhhhhhhhhhhhhh...........eeeeee.....ee.hhhhhhh.. Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (1) -PROTEASOME_ALPHA_1 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (1)
PROSITE (2) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
PROSITE (3) ----------------PROTEASOME_ALPHA_2 PDB: E:23-233 UniProt: 23-233 PROSITE (3)
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3jrm E 7 AYDRAITVFSPDGRLFQVEYAREAVKKGSTALGMKFANGVLLISDKKVRSRLIEQNSIEKIQLIDDYVAAVTSGLVADARVLVDFARISAQQEKVTYGSLVNIENLVKRVADQMQQYTQYGGVRPYGVSLIFAGIDQIGPRLFDCDPAGTINEYKATAIGSGKDAVVSFLEREYKENLPEKEAVTLGIKALKSSLEEGEELKAPEIASITVGNKYRIYDQEEVKKFL 233
16 26 36 46 56 66 76 86 96 106 116 126 136 146 156 166 176 186 196 206 216 226
Chain F from PDB Type:PROTEIN Length:227
aligned with PSA_THEAC | P25156 from UniProtKB/Swiss-Prot Length:233
Alignment length:227
16 26 36 46 56 66 76 86 96 106 116 126 136 146 156 166 176 186 196 206 216 226
PSA_THEAC 7 AYDRAITVFSPDGRLFQVEYAREAVKKGSTALGMKFANGVLLISDKKVRSRLIEQNSIEKIQLIDDYVAAVTSGLVADARVLVDFARISAQQEKVTYGSLVNIENLVKRVADQMQQYTQYGGVRPYGVSLIFAGIDQIGPRLFDCDPAGTINEYKATAIGSGKDAVVSFLEREYKENLPEKEAVTLGIKALKSSLEEGEELKAPEIASITVGNKYRIYDQEEVKKFL 233
SCOP domains d3jrmf_ F: automated matches SCOP domains
CATH domains 3jrmF00 F:7-233 Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..............hhhhhhhhhhhhh...eeeeee..eeeeee................eeeee..eeeeeeehhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhh..........eeeeeeee....eeeeee.....eee..eeee..hhhhhhhhhhhhh....hhhhhhhhhhhhhhh...........eeeeee.....ee.hhhhhhh.. Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (1) -PROTEASOME_ALPHA_1 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (1)
PROSITE (2) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
PROSITE (3) ----------------PROTEASOME_ALPHA_2 PDB: F:23-233 UniProt: 23-233 PROSITE (3)
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3jrm F 7 AYDRAITVFSPDGRLFQVEYAREAVKKGSTALGMKFANGVLLISDKKVRSRLIEQNSIEKIQLIDDYVAAVTSGLVADARVLVDFARISAQQEKVTYGSLVNIENLVKRVADQMQQYTQYGGVRPYGVSLIFAGIDQIGPRLFDCDPAGTINEYKATAIGSGKDAVVSFLEREYKENLPEKEAVTLGIKALKSSLEEGEELKAPEIASITVGNKYRIYDQEEVKKFL 233
16 26 36 46 56 66 76 86 96 106 116 126 136 146 156 166 176 186 196 206 216 226
Chain G from PDB Type:PROTEIN Length:227
aligned with PSA_THEAC | P25156 from UniProtKB/Swiss-Prot Length:233
Alignment length:227
16 26 36 46 56 66 76 86 96 106 116 126 136 146 156 166 176 186 196 206 216 226
PSA_THEAC 7 AYDRAITVFSPDGRLFQVEYAREAVKKGSTALGMKFANGVLLISDKKVRSRLIEQNSIEKIQLIDDYVAAVTSGLVADARVLVDFARISAQQEKVTYGSLVNIENLVKRVADQMQQYTQYGGVRPYGVSLIFAGIDQIGPRLFDCDPAGTINEYKATAIGSGKDAVVSFLEREYKENLPEKEAVTLGIKALKSSLEEGEELKAPEIASITVGNKYRIYDQEEVKKFL 233
SCOP domains d3jrmg_ G: automated matches SCOP domains
CATH domains 3jrmG00 G:7-233 Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 CATH domains
Pfam domains (1) -Proteasome_A_N-3jrmG08 Proteasome-3jrmG01 G:31-216 ----------------- Pfam domains (1)
Pfam domains (2) -Proteasome_A_N-3jrmG09 Proteasome-3jrmG02 G:31-216 ----------------- Pfam domains (2)
Pfam domains (3) -Proteasome_A_N-3jrmG10 Proteasome-3jrmG03 G:31-216 ----------------- Pfam domains (3)
Pfam domains (4) -Proteasome_A_N-3jrmG11 Proteasome-3jrmG04 G:31-216 ----------------- Pfam domains (4)
Pfam domains (5) -Proteasome_A_N-3jrmG12 Proteasome-3jrmG05 G:31-216 ----------------- Pfam domains (5)
Pfam domains (6) -Proteasome_A_N-3jrmG13 Proteasome-3jrmG06 G:31-216 ----------------- Pfam domains (6)
Pfam domains (7) -Proteasome_A_N-3jrmG14 Proteasome-3jrmG07 G:31-216 ----------------- Pfam domains (7)
Sec.struct. author ..............hhhhhhhhhhhhh...eeeeee..eeeeee................eeeee..eeeeeeehhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhh..........eeeeeeee....eeeeee.....eee..eeee..hhhhhhhhhhhhh....hhhhhhhhhhhhhhh...........eeeeee.....ee.hhhhhhh.. Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (1) -PROTEASOME_ALPHA_1 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (1)
PROSITE (2) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
PROSITE (3) ----------------PROTEASOME_ALPHA_2 PDB: G:23-233 UniProt: 23-233 PROSITE (3)
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3jrm G 7 AYDRAITVFSPDGRLFQVEYAREAVKKGSTALGMKFANGVLLISDKKVRSRLIEQNSIEKIQLIDDYVAAVTSGLVADARVLVDFARISAQQEKVTYGSLVNIENLVKRVADQMQQYTQYGGVRPYGVSLIFAGIDQIGPRLFDCDPAGTINEYKATAIGSGKDAVVSFLEREYKENLPEKEAVTLGIKALKSSLEEGEELKAPEIASITVGNKYRIYDQEEVKKFL 233
16 26 36 46 56 66 76 86 96 106 116 126 136 146 156 166 176 186 196 206 216 226
Chain H from PDB Type:PROTEIN Length:203
aligned with PSB_THEAC | P28061 from UniProtKB/Swiss-Prot Length:211
Alignment length:203
18 28 38 48 58 68 78 88 98 108 118 128 138 148 158 168 178 188 198 208
PSB_THEAC 9 TTTVGITLKDAVIMATERRVTMENFIMHKNGKKLFQIDTYTGMTIAGLVGDAQVLVRYMKAELELYRLQRRVNMPIEAVATLLSNMLNQVKYMPYMVQLLVGGIDTAPHVFSIDAAGGSVEDIYASTGSGSPFVYGVLESQYSEKMTVDEGVDLVIRAISAAKQRDSASGGMIDVAVITRKDGYVQLPTDQIESRIRKLGLIL 211
SCOP domains d3jrmh_ H: Proteasome beta subunit (catalytic) SCOP domains
CATH domains 3jrmH00 H:1-203 Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..eeeeee..eeeeee...eee..eeee.....eeeee..eeeeeeehhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhh......eeeeeeee...eeeeee.....eee..eeee..hhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhh.......eeeeee...eeee.hhhhhhhhhhhh.... Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (2) ---PROTEASOME_BETA_1 PDB: H:4-51 UniProt: 12-59 -------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3jrm H 1 TTTVGITLKDAVIMATERRVTMENFIMHKNGKKLFQIDTYTGMTIAGLVGDAQVLVRYMKAELELYRLQRRVNMPIEAVATLLSNMLNQVKYMPYMVQLLVGGIDTAPHVFSIDAAGGSVEDIYASTGSGSPFVYGVLESQYSEKMTVDEGVDLVIRAISAAKQRDSASGGMIDVAVITRKDGYVQLPTDQIESRIRKLGLIL 203
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200
Chain I from PDB Type:PROTEIN Length:203
aligned with PSB_THEAC | P28061 from UniProtKB/Swiss-Prot Length:211
Alignment length:203
18 28 38 48 58 68 78 88 98 108 118 128 138 148 158 168 178 188 198 208
PSB_THEAC 9 TTTVGITLKDAVIMATERRVTMENFIMHKNGKKLFQIDTYTGMTIAGLVGDAQVLVRYMKAELELYRLQRRVNMPIEAVATLLSNMLNQVKYMPYMVQLLVGGIDTAPHVFSIDAAGGSVEDIYASTGSGSPFVYGVLESQYSEKMTVDEGVDLVIRAISAAKQRDSASGGMIDVAVITRKDGYVQLPTDQIESRIRKLGLIL 211
SCOP domains d3jrmi_ I: Proteasome beta subunit (catalytic) SCOP domains
CATH domains 3jrmI00 I:1-203 Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..eeeeee..eeeeee...eee..eeee.....eeeee..eeeeeeehhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhh......eeeeeeee...eeeeee.....eeee.eeee..hhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhh.......eeeeee...eeee.hhhhhhhhhhhhh... Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (2) ---PROTEASOME_BETA_1 PDB: I:4-51 UniProt: 12-59 -------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3jrm I 1 TTTVGITLKDAVIMATERRVTMENFIMHKNGKKLFQIDTYTGMTIAGLVGDAQVLVRYMKAELELYRLQRRVNMPIEAVATLLSNMLNQVKYMPYMVQLLVGGIDTAPHVFSIDAAGGSVEDIYASTGSGSPFVYGVLESQYSEKMTVDEGVDLVIRAISAAKQRDSASGGMIDVAVITRKDGYVQLPTDQIESRIRKLGLIL 203
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200
Chain J from PDB Type:PROTEIN Length:203
aligned with PSB_THEAC | P28061 from UniProtKB/Swiss-Prot Length:211
Alignment length:203
18 28 38 48 58 68 78 88 98 108 118 128 138 148 158 168 178 188 198 208
PSB_THEAC 9 TTTVGITLKDAVIMATERRVTMENFIMHKNGKKLFQIDTYTGMTIAGLVGDAQVLVRYMKAELELYRLQRRVNMPIEAVATLLSNMLNQVKYMPYMVQLLVGGIDTAPHVFSIDAAGGSVEDIYASTGSGSPFVYGVLESQYSEKMTVDEGVDLVIRAISAAKQRDSASGGMIDVAVITRKDGYVQLPTDQIESRIRKLGLIL 211
SCOP domains d3jrmj_ J: Proteasome beta subunit (catalytic) SCOP domains
CATH domains 3jrmJ00 J:1-203 Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..eeeeee..eeeeee...eee..eeee.....eeeee..eeeeeeehhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhh......eeeeeeee...eeeeee.....eee..eeee..hhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhh.......eeeeee...eeee.hhhhhhhhhhhhh... Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (2) ---PROTEASOME_BETA_1 PDB: J:4-51 UniProt: 12-59 -------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3jrm J 1 TTTVGITLKDAVIMATERRVTMENFIMHKNGKKLFQIDTYTGMTIAGLVGDAQVLVRYMKAELELYRLQRRVNMPIEAVATLLSNMLNQVKYMPYMVQLLVGGIDTAPHVFSIDAAGGSVEDIYASTGSGSPFVYGVLESQYSEKMTVDEGVDLVIRAISAAKQRDSASGGMIDVAVITRKDGYVQLPTDQIESRIRKLGLIL 203
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200
Chain K from PDB Type:PROTEIN Length:203
aligned with PSB_THEAC | P28061 from UniProtKB/Swiss-Prot Length:211
Alignment length:203
18 28 38 48 58 68 78 88 98 108 118 128 138 148 158 168 178 188 198 208
PSB_THEAC 9 TTTVGITLKDAVIMATERRVTMENFIMHKNGKKLFQIDTYTGMTIAGLVGDAQVLVRYMKAELELYRLQRRVNMPIEAVATLLSNMLNQVKYMPYMVQLLVGGIDTAPHVFSIDAAGGSVEDIYASTGSGSPFVYGVLESQYSEKMTVDEGVDLVIRAISAAKQRDSASGGMIDVAVITRKDGYVQLPTDQIESRIRKLGLIL 211
SCOP domains d3jrmk_ K: Proteasome beta subunit (catalytic) SCOP domains
CATH domains 3jrmK00 K:1-203 Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..eeeeee..eeeeee...eee..eeee.....eeeee..eeeeeeehhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhh......eeeeeeee...eeeeee.....eee..eeee..hhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhh.......eeeeee...eeee.hhhhhhhhhhhhh... Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (2) ---PROTEASOME_BETA_1 PDB: K:4-51 UniProt: 12-59 -------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3jrm K 1 TTTVGITLKDAVIMATERRVTMENFIMHKNGKKLFQIDTYTGMTIAGLVGDAQVLVRYMKAELELYRLQRRVNMPIEAVATLLSNMLNQVKYMPYMVQLLVGGIDTAPHVFSIDAAGGSVEDIYASTGSGSPFVYGVLESQYSEKMTVDEGVDLVIRAISAAKQRDSASGGMIDVAVITRKDGYVQLPTDQIESRIRKLGLIL 203
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200
Chain L from PDB Type:PROTEIN Length:203
aligned with PSB_THEAC | P28061 from UniProtKB/Swiss-Prot Length:211
Alignment length:203
18 28 38 48 58 68 78 88 98 108 118 128 138 148 158 168 178 188 198 208
PSB_THEAC 9 TTTVGITLKDAVIMATERRVTMENFIMHKNGKKLFQIDTYTGMTIAGLVGDAQVLVRYMKAELELYRLQRRVNMPIEAVATLLSNMLNQVKYMPYMVQLLVGGIDTAPHVFSIDAAGGSVEDIYASTGSGSPFVYGVLESQYSEKMTVDEGVDLVIRAISAAKQRDSASGGMIDVAVITRKDGYVQLPTDQIESRIRKLGLIL 211
SCOP domains d3jrml_ L: Proteasome beta subunit (catalytic) SCOP domains
CATH domains 3jrmL00 L:1-203 Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..eeeeee..eeeeee...eee..eeee.....eeeee..eeeeeeehhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhh......eeeeeeee...eeeeee.....eeee.eeee..hhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhh.......eeeeee...eeee.hhhhhhhhhhhhh... Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (2) ---PROTEASOME_BETA_1 PDB: L:4-51 UniProt: 12-59 -------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3jrm L 1 TTTVGITLKDAVIMATERRVTMENFIMHKNGKKLFQIDTYTGMTIAGLVGDAQVLVRYMKAELELYRLQRRVNMPIEAVATLLSNMLNQVKYMPYMVQLLVGGIDTAPHVFSIDAAGGSVEDIYASTGSGSPFVYGVLESQYSEKMTVDEGVDLVIRAISAAKQRDSASGGMIDVAVITRKDGYVQLPTDQIESRIRKLGLIL 203
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200
Chain M from PDB Type:PROTEIN Length:203
aligned with PSB_THEAC | P28061 from UniProtKB/Swiss-Prot Length:211
Alignment length:203
18 28 38 48 58 68 78 88 98 108 118 128 138 148 158 168 178 188 198 208
PSB_THEAC 9 TTTVGITLKDAVIMATERRVTMENFIMHKNGKKLFQIDTYTGMTIAGLVGDAQVLVRYMKAELELYRLQRRVNMPIEAVATLLSNMLNQVKYMPYMVQLLVGGIDTAPHVFSIDAAGGSVEDIYASTGSGSPFVYGVLESQYSEKMTVDEGVDLVIRAISAAKQRDSASGGMIDVAVITRKDGYVQLPTDQIESRIRKLGLIL 211
SCOP domains d3jrmm_ M: Proteasome beta subunit (catalytic) SCOP domains
CATH domains 3jrmM00 M:1-203 Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..eeeee...eeeeee...eee..eeee.....eeeee..eeeeeeehhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhh......eeeeeeee...eeeeee.....eee..eeee..hhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhh.......eeeeee...eeee.hhhhhhhhhhhhh... Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (2) ---PROTEASOME_BETA_1 PDB: M:4-51 UniProt: 12-59 -------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3jrm M 1 TTTVGITLKDAVIMATERRVTMENFIMHKNGKKLFQIDTYTGMTIAGLVGDAQVLVRYMKAELELYRLQRRVNMPIEAVATLLSNMLNQVKYMPYMVQLLVGGIDTAPHVFSIDAAGGSVEDIYASTGSGSPFVYGVLESQYSEKMTVDEGVDLVIRAISAAKQRDSASGGMIDVAVITRKDGYVQLPTDQIESRIRKLGLIL 203
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200
Chain N from PDB Type:PROTEIN Length:203
aligned with PSB_THEAC | P28061 from UniProtKB/Swiss-Prot Length:211
Alignment length:203
18 28 38 48 58 68 78 88 98 108 118 128 138 148 158 168 178 188 198 208
PSB_THEAC 9 TTTVGITLKDAVIMATERRVTMENFIMHKNGKKLFQIDTYTGMTIAGLVGDAQVLVRYMKAELELYRLQRRVNMPIEAVATLLSNMLNQVKYMPYMVQLLVGGIDTAPHVFSIDAAGGSVEDIYASTGSGSPFVYGVLESQYSEKMTVDEGVDLVIRAISAAKQRDSASGGMIDVAVITRKDGYVQLPTDQIESRIRKLGLIL 211
SCOP domains d3jrmn_ N: Proteasome beta subunit (catalytic) SCOP domains
CATH domains 3jrmN00 N:1-203 Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 CATH domains
Pfam domains (1) Proteasome-3jrmN01 N:1-178 ------------------------- Pfam domains (1)
Pfam domains (2) Proteasome-3jrmN02 N:1-178 ------------------------- Pfam domains (2)
Pfam domains (3) Proteasome-3jrmN03 N:1-178 ------------------------- Pfam domains (3)
Pfam domains (4) Proteasome-3jrmN04 N:1-178 ------------------------- Pfam domains (4)
Pfam domains (5) Proteasome-3jrmN05 N:1-178 ------------------------- Pfam domains (5)
Pfam domains (6) Proteasome-3jrmN06 N:1-178 ------------------------- Pfam domains (6)
Pfam domains (7) Proteasome-3jrmN07 N:1-178 ------------------------- Pfam domains (7)
Sec.struct. author ..eeeeee..eeeeee...eee..eeee.....eeeee..eeeeeeehhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhh......eeeeeeee...eeeeee.....eeee.eeee..hhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhh.......eeeeee...eeee.hhhhhhhhhhhhh... Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (2) ---PROTEASOME_BETA_1 PDB: N:4-51 UniProt: 12-59 -------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE (2)
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3jrm N 1 TTTVGITLKDAVIMATERRVTMENFIMHKNGKKLFQIDTYTGMTIAGLVGDAQVLVRYMKAELELYRLQRRVNMPIEAVATLLSNMLNQVKYMPYMVQLLVGGIDTAPHVFSIDAAGGSVEDIYASTGSGSPFVYGVLESQYSEKMTVDEGVDLVIRAISAAKQRDSASGGMIDVAVITRKDGYVQLPTDQIESRIRKLGLIL 203
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200
Chain O from PDB Type:PROTEIN Length:218
aligned with Q9U8G2_9TRYP | Q9U8G2 from UniProtKB/TrEMBL Length:231
Alignment length:228
13 23 33 43 53 63 73 83 93 103 113 123 133 143 153 163 173 183 193 203 213 223
Q9U8G2_9TRYP 4 KRAALIQNLRDSYTETSSFAVIEEWAAGTLQEIEGIAKAAAEAHGTIRNSTYGRAQAEKSPEQLLGVLQRYQDLCHNVYCQAETIRTVIAIRIPEHKEEDNLGVAVQHAVLKIIDELEIKTLGSGEKSGSGGAPTPIGMYALREYLSARSTVEDKLLGSVDAESGKTKGGSQSPSLLLELRQIDADFMLKVELATTHLSTMVRAVINAYLLNWKKLIQPRTGSDHMVS 231
SCOP domains d3jrmo_ O: automated matches SCOP domains
CATH domains 3jrmO01 O:4-221 [code=1.20.120.180, no name defined] ---------- CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.........hhhhhhhhhhhhhhhhhhhh...................hhhhhhhhhhhhhhhhhhh----------....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhh. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
3jrm O 4 KRAALIQNLRDSYTETSSFAVIEEWAAGTLQEIEGIAKAAAEAHGVIRNSTYGRAQAEKSPEQLLGVLQRYQDLCHNVYCQAETIRTVIAIRIPEHKEADNLGVAVQHAVLKIIDELEIKTLGSGEKSGSGGAPTPIGMYALREYLSARSTVEDKLLG----------GGSQSPSLLLELRQIDADFMLKVELATTHLSTMVRAVINAYLLNWKKLIQPRTGTDHMYS 231
13 23 33 43 53 63 73 83 93 103 113 123 133 143 153 | - 173 183 193 203 213 223
161 172
Chain P from PDB Type:PROTEIN Length:218
aligned with Q9U8G2_9TRYP | Q9U8G2 from UniProtKB/TrEMBL Length:231
Alignment length:228
13 23 33 43 53 63 73 83 93 103 113 123 133 143 153 163 173 183 193 203 213 223
Q9U8G2_9TRYP 4 KRAALIQNLRDSYTETSSFAVIEEWAAGTLQEIEGIAKAAAEAHGTIRNSTYGRAQAEKSPEQLLGVLQRYQDLCHNVYCQAETIRTVIAIRIPEHKEEDNLGVAVQHAVLKIIDELEIKTLGSGEKSGSGGAPTPIGMYALREYLSARSTVEDKLLGSVDAESGKTKGGSQSPSLLLELRQIDADFMLKVELATTHLSTMVRAVINAYLLNWKKLIQPRTGSDHMVS 231
SCOP domains d3jrmp_ P: automated matches SCOP domains
CATH domains 3jrmP01 P:4-221 [code=1.20.120.180, no name defined] ---------- CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.........hhhhhhhhhhhhhhhhhhhh...................hhhhhhhhhhhhhhhhhhh----------....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhh. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
3jrm P 4 KRAALIQNLRDSYTETSSFAVIEEWAAGTLQEIEGIAKAAAEAHGVIRNSTYGRAQAEKSPEQLLGVLQRYQDLCHNVYCQAETIRTVIAIRIPEHKEADNLGVAVQHAVLKIIDELEIKTLGSGEKSGSGGAPTPIGMYALREYLSARSTVEDKLLG----------GGSQSPSLLLELRQIDADFMLKVELATTHLSTMVRAVINAYLLNWKKLIQPRTGTDHMYS 231
13 23 33 43 53 63 73 83 93 103 113 123 133 143 153 | - 173 183 193 203 213 223
161 172
Chain Q from PDB Type:PROTEIN Length:218
aligned with Q9U8G2_9TRYP | Q9U8G2 from UniProtKB/TrEMBL Length:231
Alignment length:228
13 23 33 43 53 63 73 83 93 103 113 123 133 143 153 163 173 183 193 203 213 223
Q9U8G2_9TRYP 4 KRAALIQNLRDSYTETSSFAVIEEWAAGTLQEIEGIAKAAAEAHGTIRNSTYGRAQAEKSPEQLLGVLQRYQDLCHNVYCQAETIRTVIAIRIPEHKEEDNLGVAVQHAVLKIIDELEIKTLGSGEKSGSGGAPTPIGMYALREYLSARSTVEDKLLGSVDAESGKTKGGSQSPSLLLELRQIDADFMLKVELATTHLSTMVRAVINAYLLNWKKLIQPRTGSDHMVS 231
SCOP domains d3jrmq_ Q: automated matches SCOP domains
CATH domains 3jrmQ01 Q:4-221 [code=1.20.120.180, no name defined] ---------- CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.........hhhhhhhhhhhhhhhhhhhh...................hhhhhhhhhhhhhhhhhhh----------....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhh. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
3jrm Q 4 KRAALIQNLRDSYTETSSFAVIEEWAAGTLQEIEGIAKAAAEAHGVIRNSTYGRAQAEKSPEQLLGVLQRYQDLCHNVYCQAETIRTVIAIRIPEHKEADNLGVAVQHAVLKIIDELEIKTLGSGEKSGSGGAPTPIGMYALREYLSARSTVEDKLLG----------GGSQSPSLLLELRQIDADFMLKVELATTHLSTMVRAVINAYLLNWKKLIQPRTGTDHMYS 231
13 23 33 43 53 63 73 83 93 103 113 123 133 143 153 | - 173 183 193 203 213 223
161 172
Chain R from PDB Type:PROTEIN Length:218
aligned with Q9U8G2_9TRYP | Q9U8G2 from UniProtKB/TrEMBL Length:231
Alignment length:228
13 23 33 43 53 63 73 83 93 103 113 123 133 143 153 163 173 183 193 203 213 223
Q9U8G2_9TRYP 4 KRAALIQNLRDSYTETSSFAVIEEWAAGTLQEIEGIAKAAAEAHGTIRNSTYGRAQAEKSPEQLLGVLQRYQDLCHNVYCQAETIRTVIAIRIPEHKEEDNLGVAVQHAVLKIIDELEIKTLGSGEKSGSGGAPTPIGMYALREYLSARSTVEDKLLGSVDAESGKTKGGSQSPSLLLELRQIDADFMLKVELATTHLSTMVRAVINAYLLNWKKLIQPRTGSDHMVS 231
SCOP domains d3jrmr_ R: automated matches SCOP domains
CATH domains 3jrmR01 R:4-221 [code=1.20.120.180, no name defined] ---------- CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author hhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.........hhhhhhhhhhhhhhhhhhhh...................hhhhhhhhhhhhhhhhhhh----------....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhh. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
3jrm R 4 KRAALIQNLRDSYTETSSFAVIEEWAAGTLQEIEGIAKAAAEAHGVIRNSTYGRAQAEKSPEQLLGVLQRYQDLCHNVYCQAETIRTVIAIRIPEHKEADNLGVAVQHAVLKIIDELEIKTLGSGEKSGSGGAPTPIGMYALREYLSARSTVEDKLLG----------GGSQSPSLLLELRQIDADFMLKVELATTHLSTMVRAVINAYLLNWKKLIQPRTGTDHMYS 231
13 23 33 43 53 63 73 83 93 103 113 123 133 143 153 | - 173 183 193 203 213 223
161 172
Chain S from PDB Type:PROTEIN Length:218
aligned with Q9U8G2_9TRYP | Q9U8G2 from UniProtKB/TrEMBL Length:231
Alignment length:228
13 23 33 43 53 63 73 83 93 103 113 123 133 143 153 163 173 183 193 203 213 223
Q9U8G2_9TRYP 4 KRAALIQNLRDSYTETSSFAVIEEWAAGTLQEIEGIAKAAAEAHGTIRNSTYGRAQAEKSPEQLLGVLQRYQDLCHNVYCQAETIRTVIAIRIPEHKEEDNLGVAVQHAVLKIIDELEIKTLGSGEKSGSGGAPTPIGMYALREYLSARSTVEDKLLGSVDAESGKTKGGSQSPSLLLELRQIDADFMLKVELATTHLSTMVRAVINAYLLNWKKLIQPRTGSDHMVS 231
SCOP domains d3jrms_ S: automated matches SCOP domains
CATH domains 3jrmS01 S:4-221 [code=1.20.120.180, no name defined] ---------- CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.........hhhhhhhhhhhhhhhhhhhh...................hhhhhhhhhhhhhhhhhhh----------....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhh. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
3jrm S 4 KRAALIQNLRDSYTETSSFAVIEEWAAGTLQEIEGIAKAAAEAHGVIRNSTYGRAQAEKSPEQLLGVLQRYQDLCHNVYCQAETIRTVIAIRIPEHKEADNLGVAVQHAVLKIIDELEIKTLGSGEKSGSGGAPTPIGMYALREYLSARSTVEDKLLG----------GGSQSPSLLLELRQIDADFMLKVELATTHLSTMVRAVINAYLLNWKKLIQPRTGTDHMYS 231
13 23 33 43 53 63 73 83 93 103 113 123 133 143 153 | - 173 183 193 203 213 223
161 172
Chain T from PDB Type:PROTEIN Length:218
aligned with Q9U8G2_9TRYP | Q9U8G2 from UniProtKB/TrEMBL Length:231
Alignment length:228
13 23 33 43 53 63 73 83 93 103 113 123 133 143 153 163 173 183 193 203 213 223
Q9U8G2_9TRYP 4 KRAALIQNLRDSYTETSSFAVIEEWAAGTLQEIEGIAKAAAEAHGTIRNSTYGRAQAEKSPEQLLGVLQRYQDLCHNVYCQAETIRTVIAIRIPEHKEEDNLGVAVQHAVLKIIDELEIKTLGSGEKSGSGGAPTPIGMYALREYLSARSTVEDKLLGSVDAESGKTKGGSQSPSLLLELRQIDADFMLKVELATTHLSTMVRAVINAYLLNWKKLIQPRTGSDHMVS 231
SCOP domains d3jrmt_ T: automated matches SCOP domains
CATH domains 3jrmT01 T:4-221 [code=1.20.120.180, no name defined] ---------- CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.........hhhhhhhhhhhhhhhhhhhh...................hhhhhhhhhhhhhhhhhhh----------....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhh. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
3jrm T 4 KRAALIQNLRDSYTETSSFAVIEEWAAGTLQEIEGIAKAAAEAHGVIRNSTYGRAQAEKSPEQLLGVLQRYQDLCHNVYCQAETIRTVIAIRIPEHKEADNLGVAVQHAVLKIIDELEIKTLGSGEKSGSGGAPTPIGMYALREYLSARSTVEDKLLG----------GGSQSPSLLLELRQIDADFMLKVELATTHLSTMVRAVINAYLLNWKKLIQPRTGTDHMYS 231
13 23 33 43 53 63 73 83 93 103 113 123 133 143 153 | - 173 183 193 203 213 223
161 172
Chain U from PDB Type:PROTEIN Length:218
aligned with Q9U8G2_9TRYP | Q9U8G2 from UniProtKB/TrEMBL Length:231
Alignment length:228
13 23 33 43 53 63 73 83 93 103 113 123 133 143 153 163 173 183 193 203 213 223
Q9U8G2_9TRYP 4 KRAALIQNLRDSYTETSSFAVIEEWAAGTLQEIEGIAKAAAEAHGTIRNSTYGRAQAEKSPEQLLGVLQRYQDLCHNVYCQAETIRTVIAIRIPEHKEEDNLGVAVQHAVLKIIDELEIKTLGSGEKSGSGGAPTPIGMYALREYLSARSTVEDKLLGSVDAESGKTKGGSQSPSLLLELRQIDADFMLKVELATTHLSTMVRAVINAYLLNWKKLIQPRTGSDHMVS 231
SCOP domains d3jrmu_ U: automated matches SCOP domains
CATH domains 3jrmU01 U:4-221 [code=1.20.120.180, no name defined] ---------- CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.........hhhhhhhhhhhhhhhhhhhh...................hhhhhhhhhhhhhhhhhhh----------....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhh. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
3jrm U 4 KRAALIQNLRDSYTETSSFAVIEEWAAGTLQEIEGIAKAAAEAHGVIRNSTYGRAQAEKSPEQLLGVLQRYQDLCHNVYCQAETIRTVIAIRIPEHKEADNLGVAVQHAVLKIIDELEIKTLGSGEKSGSGGAPTPIGMYALREYLSARSTVEDKLLG----------GGSQSPSLLLELRQIDADFMLKVELATTHLSTMVRAVINAYLLNWKKLIQPRTGTDHMYS 231
13 23 33 43 53 63 73 83 93 103 113 123 133 143 153 | - 173 183 193 203 213 223
161 172
Legend: |
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→ Mismatch |
(orange background) |
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- |
→ Gap |
(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |