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(-) Description

Title :  GLUTAMATE DEHYDROGENASE IN COMPLEX WITH NADH AND GTP, CLOSED CONFORMATION
 
Authors :  M. J. Borgnia, S. Banerjee, A. Merk, D. Matthies, A. Bartesaghi, P. Rao, J. Pierson, L. A. Earl, V. Falconieri, S. Subramaniam, J. L. S. Milne
Date :  28 Mar 16  (Deposition) - 27 Apr 16  (Release) - 11 May 16  (Revision)
Method :  ELECTRON MICROSCOPY
Resolution :  3.40
Chains :  Asym./Biol. Unit :  A,B,C,D,E,F
Keywords :  Glutamate Metabolism, Mitochondria, Oxidoreductase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  M. J. Borgnia, S. Banerjee, A. Merk, D. Matthies, A. Bartesaghi, P. Rao J. Pierson, L. A. Earl, V. Falconieri, S. Subramaniam, J. L. Milne
Using Cryo-Em To Map Small Ligands On Dynamic Metabolic Enzymes: Studies With Glutamate Dehydrogenase.
Mol. Pharmacol. V. 89 645 2016
PubMed-ID: 27036132  |  Reference-DOI: 10.1124/MOL.116.103382

(-) Compounds

Molecule 1 - GLUTAMATE DEHYDROGENASE 1, MITOCHONDRIAL
    Chains: A, B, C, D, E, F
    EC Number: 1.4.1.3
    Fragment: UNP RESIDUES 58-558
    Organism Common: BOVINE
    Organism Scientific: BOS TAURUS
    Organism Taxid: 9913
    Synonym: GDH 1

 Structural Features

(-) Chains, Units

  123456
Asymmetric/Biological Unit : ABCDEF

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 18)

Asymmetric/Biological Unit (2, 18)
No.NameCountTypeFull Name
1GTP6Ligand/IonGUANOSINE-5'-TRIPHOSPHATE
2NAI12Ligand/Ion1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE

(-) Sites  (18, 18)

Asymmetric Unit (18, 18)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREARG A:94 , ASP A:168 , MET A:169 , SER A:170 , THR A:215 , GLN A:250 , GLY A:251 , GLY A:253 , ASN A:254 , VAL A:255 , GLU A:275 , SER A:276 , ALA A:325 , ALA A:326 , GLY A:347 , ASN A:349BINDING SITE FOR RESIDUE NAI A 601
02AC2SOFTWAREHIS A:209 , SER A:213 , ARG A:261 , TYR A:262 , ARG A:265 , GLU A:292 , HIS A:450BINDING SITE FOR RESIDUE GTP A 602
03AC3SOFTWAREHIS A:195 , GLN A:205 , GLY A:206 , ASN A:387 , ASN A:388 , HIS A:391 , VAL A:392 , SER A:393 , GLU A:445 , HIS C:85 , ARG C:86 , THR C:87 , CYS C:115 , ASP C:119 , VAL C:120 , PRO C:121 , LYS C:488BINDING SITE FOR RESIDUE NAI A 603
04AC4SOFTWAREHIS A:85 , ARG A:86 , THR A:87 , CYS A:115 , ASP A:119 , VAL A:120 , PRO A:121 , LYS A:488 , HIS B:195 , GLN B:205 , GLY B:206 , ASN B:387 , ASN B:388 , HIS B:391 , VAL B:392 , SER B:393 , GLU B:445BINDING SITE FOR RESIDUE NAI B 601
05AC5SOFTWAREARG B:94 , ASP B:168 , MET B:169 , SER B:170 , THR B:215 , GLN B:250 , GLY B:251 , GLY B:253 , ASN B:254 , VAL B:255 , GLU B:275 , SER B:276 , ALA B:325 , ALA B:326 , GLY B:347 , ASN B:349BINDING SITE FOR RESIDUE NAI B 602
06AC6SOFTWAREHIS B:209 , SER B:213 , ARG B:261 , TYR B:262 , ARG B:265 , GLU B:292 , HIS B:450BINDING SITE FOR RESIDUE GTP B 603
07AC7SOFTWAREHIS B:85 , ARG B:86 , THR B:87 , CYS B:115 , ASP B:119 , VAL B:120 , PRO B:121 , LYS B:488 , HIS C:195 , GLN C:205 , GLY C:206 , ASN C:387 , ASN C:388 , HIS C:391 , VAL C:392 , SER C:393 , GLU C:445BINDING SITE FOR RESIDUE NAI C 601
08AC8SOFTWAREARG C:94 , ASP C:168 , MET C:169 , SER C:170 , THR C:215 , GLN C:250 , GLY C:251 , GLY C:253 , ASN C:254 , VAL C:255 , GLU C:275 , SER C:276 , ALA C:325 , ALA C:326 , GLY C:347 , ASN C:349 , ASN C:374BINDING SITE FOR RESIDUE NAI C 602
09AC9SOFTWAREHIS C:209 , SER C:213 , ARG C:261 , TYR C:262 , ARG C:265 , GLU C:292 , HIS C:450BINDING SITE FOR RESIDUE GTP C 603
10BC1SOFTWAREARG D:94 , ASP D:168 , MET D:169 , SER D:170 , THR D:215 , GLN D:250 , GLY D:251 , GLY D:253 , ASN D:254 , VAL D:255 , GLU D:275 , SER D:276 , ALA D:325 , ALA D:326 , GLY D:347 , ASN D:349BINDING SITE FOR RESIDUE NAI D 601
11BC2SOFTWAREHIS D:209 , SER D:213 , ARG D:261 , TYR D:262 , ARG D:265 , GLU D:292 , HIS D:450BINDING SITE FOR RESIDUE GTP D 602
12BC3SOFTWAREHIS D:195 , GLN D:205 , GLY D:206 , ASN D:387 , ASN D:388 , HIS D:391 , VAL D:392 , SER D:393 , GLU D:445 , HIS F:85 , ARG F:86 , THR F:87 , CYS F:115 , ASP F:119 , VAL F:120 , PRO F:121 , LYS F:488BINDING SITE FOR RESIDUE NAI D 603
13BC4SOFTWAREHIS D:85 , ARG D:86 , THR D:87 , CYS D:115 , ASP D:119 , VAL D:120 , PRO D:121 , LYS D:488 , HIS E:195 , GLN E:205 , GLY E:206 , ASN E:387 , ASN E:388 , HIS E:391 , VAL E:392 , SER E:393 , GLU E:445BINDING SITE FOR RESIDUE NAI E 601
14BC5SOFTWAREARG E:94 , ASP E:168 , MET E:169 , SER E:170 , THR E:215 , GLN E:250 , GLY E:251 , GLY E:253 , ASN E:254 , VAL E:255 , GLU E:275 , SER E:276 , ALA E:325 , ALA E:326 , GLY E:347 , ASN E:349BINDING SITE FOR RESIDUE NAI E 602
15BC6SOFTWAREHIS E:209 , SER E:213 , ARG E:261 , TYR E:262 , ARG E:265 , GLU E:292 , HIS E:450BINDING SITE FOR RESIDUE GTP E 603
16BC7SOFTWAREHIS E:85 , ARG E:86 , THR E:87 , CYS E:115 , ASP E:119 , VAL E:120 , PRO E:121 , LYS E:488 , HIS F:195 , GLN F:205 , GLY F:206 , ASN F:387 , ASN F:388 , HIS F:391 , VAL F:392 , SER F:393 , GLU F:445BINDING SITE FOR RESIDUE NAI F 601
17BC8SOFTWAREARG F:94 , ASP F:168 , MET F:169 , SER F:170 , THR F:215 , GLN F:250 , GLY F:251 , GLY F:253 , ASN F:254 , VAL F:255 , GLU F:275 , SER F:276 , ALA F:325 , ALA F:326 , GLY F:347 , ASN F:349 , ASN F:374BINDING SITE FOR RESIDUE NAI F 602
18BC9SOFTWAREHIS F:209 , SER F:213 , ARG F:261 , TYR F:262 , ARG F:265 , GLU F:292 , HIS F:450BINDING SITE FOR RESIDUE GTP F 603

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 3JD4)

(-) Cis Peptide Bonds  (6, 6)

Asymmetric/Biological Unit
No.Residues
1Thr A:87 -Pro A:88
2Thr B:87 -Pro B:88
3Thr C:87 -Pro C:88
4Thr D:87 -Pro D:88
5Thr E:87 -Pro E:88
6Thr F:87 -Pro F:88

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 3JD4)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 3JD4)

(-) Exons   (0, 0)

(no "Exon" information available for 3JD4)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:497
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...hhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhh...eeee....ee.....ee...eeeee.......eeeeeee....hhhhhhhhhhhhhhhhhhh....eeeeeee.........hhhhhhhhhhhhhhhhh.......eeee.....hhhhhhhhhhhhhhhh.....hhhhhh...hhhhh......hhhhhhhhhhhhhhhhhhhhhhhhh........eeeee..hhhhhhhhhhhhh...eeeeee....eee.....hhhhhhhhhhhh.........eee..hhhhh...ee............hhhhh...ee........hhhhhhhhhhh..ee.hhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhh..... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3jd4 A   5 DDPNFFKMVEGFFDRGASIVEDKLVEDLKTRETEEQKRNRVRSILRIIKPCNHVLSLSFPIRRDDGSWEVIEGYRAQHSQHRTPCKGGIRYSTDVSVDEVKALASLMTYKCAVVDVPFGGAKAGVKINPKNYTDNELEKITRRFTMELAKKGFIGPGVDVPAPDMSTGEREMSWIADTYASTIGHYDINAHACVTGKPISQGGIHGRISATGRGVFHGIENFINEASYMSILGMTPGFGDKTFVVQGFGNVGLHSMRYLHRFGAKCITVGESDGSIWNPDGIDPKELEDFKLQHGTILGFPKAKIYEGSILEVDCDILIPAASEKQLTKSNAPRVKAKIIAEGANGPTTPEADKIFLERNIMVIPDLYLNAGGVTVSYFEWLNNLNHVSYGRLTFKYERDSNYHLLMSVQESLERKFGKHGGTIPIVPTAEFQDRISGASEKDIVHSGLAYTMERSARQIMRTAMKYNLGLDLRTAAYVNAIEKVFRVYNEAGVTFT 501
                                    14        24        34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334       344       354       364       374       384       394       404       414       424       434       444       454       464       474       484       494       


Chain B from PDB  Type:PROTEIN  Length:497
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...hhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhh...eeee....ee.....ee...eeeee.......eeeeeee....hhhhhhhhhhhhhhhhhhh....eeeeeee.........hhhhhhhhhhhhhhhhh.......eeee.....hhhhhhhhhhhhhhhh.....hhhhhh...hhhhh......hhhhhhhhhhhhhhhhhhhhhhhhh........eeeee..hhhhhhhhhhhhh...eeeeee....eee.....hhhhhhhhhhhh.........eee..hhhhh...ee............hhhhh...ee........hhhhhhhhhhh..ee.hhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhh..... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3jd4 B   5 DDPNFFKMVEGFFDRGASIVEDKLVEDLKTRETEEQKRNRVRSILRIIKPCNHVLSLSFPIRRDDGSWEVIEGYRAQHSQHRTPCKGGIRYSTDVSVDEVKALASLMTYKCAVVDVPFGGAKAGVKINPKNYTDNELEKITRRFTMELAKKGFIGPGVDVPAPDMSTGEREMSWIADTYASTIGHYDINAHACVTGKPISQGGIHGRISATGRGVFHGIENFINEASYMSILGMTPGFGDKTFVVQGFGNVGLHSMRYLHRFGAKCITVGESDGSIWNPDGIDPKELEDFKLQHGTILGFPKAKIYEGSILEVDCDILIPAASEKQLTKSNAPRVKAKIIAEGANGPTTPEADKIFLERNIMVIPDLYLNAGGVTVSYFEWLNNLNHVSYGRLTFKYERDSNYHLLMSVQESLERKFGKHGGTIPIVPTAEFQDRISGASEKDIVHSGLAYTMERSARQIMRTAMKYNLGLDLRTAAYVNAIEKVFRVYNEAGVTFT 501
                                    14        24        34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334       344       354       364       374       384       394       404       414       424       434       444       454       464       474       484       494       


Chain C from PDB  Type:PROTEIN  Length:497
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...hhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhh...eeee....ee.....ee...eeeee.......eeeeeee....hhhhhhhhhhhhhhhhhhh....eeeeeee.........hhhhhhhhhhhhhhhhh.......eeee.....hhhhhhhhhhhhhhhh.....hhhhhh...hhhhh......hhhhhhhhhhhhhhhhhhhhhhhhh........eeeee..hhhhhhhhhhhhh...eeeeee....eee.....hhhhhhhhhhhh.........eee..hhhhh...ee............hhhhh...ee........hhhhhhhhhhh..ee.hhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhh..... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3jd4 C   5 DDPNFFKMVEGFFDRGASIVEDKLVEDLKTRETEEQKRNRVRSILRIIKPCNHVLSLSFPIRRDDGSWEVIEGYRAQHSQHRTPCKGGIRYSTDVSVDEVKALASLMTYKCAVVDVPFGGAKAGVKINPKNYTDNELEKITRRFTMELAKKGFIGPGVDVPAPDMSTGEREMSWIADTYASTIGHYDINAHACVTGKPISQGGIHGRISATGRGVFHGIENFINEASYMSILGMTPGFGDKTFVVQGFGNVGLHSMRYLHRFGAKCITVGESDGSIWNPDGIDPKELEDFKLQHGTILGFPKAKIYEGSILEVDCDILIPAASEKQLTKSNAPRVKAKIIAEGANGPTTPEADKIFLERNIMVIPDLYLNAGGVTVSYFEWLNNLNHVSYGRLTFKYERDSNYHLLMSVQESLERKFGKHGGTIPIVPTAEFQDRISGASEKDIVHSGLAYTMERSARQIMRTAMKYNLGLDLRTAAYVNAIEKVFRVYNEAGVTFT 501
                                    14        24        34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334       344       354       364       374       384       394       404       414       424       434       444       454       464       474       484       494       


Chain D from PDB  Type:PROTEIN  Length:497
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...hhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhh...eeee....ee.....ee...eeeee.......eeeeeee....hhhhhhhhhhhhhhhhhhh....eeeeeee.........hhhhhhhhhhhhhhhhh.......eeee.....hhhhhhhhhhhhhhhh.....hhhhhh...hhhhh......hhhhhhhhhhhhhhhhhhhhhhhhh........eeeee..hhhhhhhhhhhhh...eeeeee....eee.....hhhhhhhhhhhh.........eee..hhhhh...ee............hhhhh...ee........hhhhhhhhhhh..ee.hhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhh..... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3jd4 D   5 DDPNFFKMVEGFFDRGASIVEDKLVEDLKTRETEEQKRNRVRSILRIIKPCNHVLSLSFPIRRDDGSWEVIEGYRAQHSQHRTPCKGGIRYSTDVSVDEVKALASLMTYKCAVVDVPFGGAKAGVKINPKNYTDNELEKITRRFTMELAKKGFIGPGVDVPAPDMSTGEREMSWIADTYASTIGHYDINAHACVTGKPISQGGIHGRISATGRGVFHGIENFINEASYMSILGMTPGFGDKTFVVQGFGNVGLHSMRYLHRFGAKCITVGESDGSIWNPDGIDPKELEDFKLQHGTILGFPKAKIYEGSILEVDCDILIPAASEKQLTKSNAPRVKAKIIAEGANGPTTPEADKIFLERNIMVIPDLYLNAGGVTVSYFEWLNNLNHVSYGRLTFKYERDSNYHLLMSVQESLERKFGKHGGTIPIVPTAEFQDRISGASEKDIVHSGLAYTMERSARQIMRTAMKYNLGLDLRTAAYVNAIEKVFRVYNEAGVTFT 501
                                    14        24        34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334       344       354       364       374       384       394       404       414       424       434       444       454       464       474       484       494       


Chain E from PDB  Type:PROTEIN  Length:497
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...hhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhh...eeee....ee.....ee...eeeee.......eeeeeee....hhhhhhhhhhhhhhhhhhh....eeeeeee.........hhhhhhhhhhhhhhhhh.......eeee.....hhhhhhhhhhhhhhhh.....hhhhhh...hhhhh......hhhhhhhhhhhhhhhhhhhhhhhhh........eeeee..hhhhhhhhhhhhh...eeeeee....eee.....hhhhhhhhhhhh.........eee..hhhhh...ee............hhhhh...ee........hhhhhhhhhhh..ee.hhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhh..... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3jd4 E   5 DDPNFFKMVEGFFDRGASIVEDKLVEDLKTRETEEQKRNRVRSILRIIKPCNHVLSLSFPIRRDDGSWEVIEGYRAQHSQHRTPCKGGIRYSTDVSVDEVKALASLMTYKCAVVDVPFGGAKAGVKINPKNYTDNELEKITRRFTMELAKKGFIGPGVDVPAPDMSTGEREMSWIADTYASTIGHYDINAHACVTGKPISQGGIHGRISATGRGVFHGIENFINEASYMSILGMTPGFGDKTFVVQGFGNVGLHSMRYLHRFGAKCITVGESDGSIWNPDGIDPKELEDFKLQHGTILGFPKAKIYEGSILEVDCDILIPAASEKQLTKSNAPRVKAKIIAEGANGPTTPEADKIFLERNIMVIPDLYLNAGGVTVSYFEWLNNLNHVSYGRLTFKYERDSNYHLLMSVQESLERKFGKHGGTIPIVPTAEFQDRISGASEKDIVHSGLAYTMERSARQIMRTAMKYNLGLDLRTAAYVNAIEKVFRVYNEAGVTFT 501
                                    14        24        34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334       344       354       364       374       384       394       404       414       424       434       444       454       464       474       484       494       


Chain F from PDB  Type:PROTEIN  Length:497
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...hhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhh...eeee....ee.....ee...eeeee.......eeeeeee....hhhhhhhhhhhhhhhhhhh....eeeeeee.........hhhhhhhhhhhhhhhhh.......eeee.....hhhhhhhhhhhhhhhh.....hhhhhh...hhhhh......hhhhhhhhhhhhhhhhhhhhhhhhh........eeeee..hhhhhhhhhhhhh...eeeeee....eee.....hhhhhhhhhhhh.........eee..hhhhh...ee............hhhhh...ee........hhhhhhhhhhh..ee.hhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhh..... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3jd4 F   5 DDPNFFKMVEGFFDRGASIVEDKLVEDLKTRETEEQKRNRVRSILRIIKPCNHVLSLSFPIRRDDGSWEVIEGYRAQHSQHRTPCKGGIRYSTDVSVDEVKALASLMTYKCAVVDVPFGGAKAGVKINPKNYTDNELEKITRRFTMELAKKGFIGPGVDVPAPDMSTGEREMSWIADTYASTIGHYDINAHACVTGKPISQGGIHGRISATGRGVFHGIENFINEASYMSILGMTPGFGDKTFVVQGFGNVGLHSMRYLHRFGAKCITVGESDGSIWNPDGIDPKELEDFKLQHGTILGFPKAKIYEGSILEVDCDILIPAASEKQLTKSNAPRVKAKIIAEGANGPTTPEADKIFLERNIMVIPDLYLNAGGVTVSYFEWLNNLNHVSYGRLTFKYERDSNYHLLMSVQESLERKFGKHGGTIPIVPTAEFQDRISGASEKDIVHSGLAYTMERSARQIMRTAMKYNLGLDLRTAAYVNAIEKVFRVYNEAGVTFT 501
                                    14        24        34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334       344       354       364       374       384       394       404       414       424       434       444       454       464       474       484       494
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 3JD4)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 3JD4)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 3JD4)

(-) Gene Ontology  (14, 14)

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  3jd4
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  DHE3_BOVIN | P00366
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  1.4.1.3
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  DHE3_BOVIN | P00366
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        DHE3_BOVIN | P00366: 1hwy 1hwz 1nqt 1nr7 3etd 3ete 3etg 3jcz 3jd0 3jd1 3jd2 3jd3 3mvo 3mvq 3mw9 3qmu 5k12

(-) Related Entries Specified in the PDB File

3jcz 3jd0 3jd1 3jd2 3jd3