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(-) Description

Title :  CRYO-ELECTRON MICROSCOPY STRUCTURE OF RAG SIGNAL END COMPLEX (C2 SYMMETRY)
 
Authors :  H. Ru, M. G. Chambers, T. -M. Fu, A. B. Tong, M. Liao, H. Wu
Date :  22 Oct 15  (Deposition) - 09 Dec 15  (Release) - 09 Dec 15  (Revision)
Method :  ELECTRON MICROSCOPY
Resolution :  3.40
Chains :  Asym./Biol. Unit :  A,B,C,D,E,F,G,H,I,J,K,L
Keywords :  Rag1, Rag2, V(D)J Recombination, Signal End Complex, Antigen Receptor Gene Recombination, T And B Cell Development, Recombination-Dna Complex (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  H. Ru, M. G. Chambers, T. M. Fu, A. B. Tong, M. Liao, H. Wu
Molecular Mechanism Of V(D)J Recombination From Synaptic Rag1-Rag2 Complex Structures.
Cell(Cambridge, Mass. ) V. 163 1138 2015
PubMed-ID: 26548953  |  Reference-DOI: 10.1016/J.CELL.2015.10.055

(-) Compounds

Molecule 1 - V(D)J RECOMBINATION-ACTIVATING PROTEIN 1
    Cell: B AND T LYMPHOCYTE
    Chains: A, C
    EC Number: 3.1.-.-, 6.3.2.-
    Engineered: YES
    Expression System: SPODOPTERA FRUGIPERDA
    Expression System Common: FALL ARMYWORM
    Expression System Plasmid: PFASTBAC1
    Expression System Taxid: 7108
    Expression System Vector Type: BACULOVIRUS
    Gene: RAG1
    Organelle: NUCLEUS
    Organism Common: ZEBRA FISH
    Organism Scientific: DANIO RERIO
    Organism Taxid: 7955
    Strain: AB
    Synonym: RAG-1, ENDONUCLEASE RAG1, E3 UBIQUITIN-PROTEIN LIGASE RAG1
 
Molecule 2 - V(D)J RECOMBINATION-ACTIVATING PROTEIN 2
    Cell: B AND T LYMPHOCYTE
    Chains: B, D
    Engineered: YES
    Expression System: SPODOPTERA FRUGIPERDA
    Expression System Common: FALL ARMYWORM
    Expression System Plasmid: PFASTBAC1
    Expression System Taxid: 7108
    Expression System Vector Type: BACULOVIRUS
    Gene: RAG2, RAG-2
    Organelle: NUCLEUS
    Organism Common: ZEBRA FISH
    Organism Scientific: DANIO RERIO
    Organism Taxid: 7955
    Strain: AB
    Synonym: RAG-2
 
Molecule 3 - 5'-D(*CP*AP*CP*AP*GP*TP*GP*CP*TP*AP*CP*AP*GP*AP*C)-3'
    Chains: E, H
    Engineered: YES
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
    Other Details: RSS SIGNAL END FORWARD STRAND
    Synthetic: YES
 
Molecule 4 - 5'-D(P*GP*TP*CP*TP*GP*TP*AP*GP*CP*AP*CP*TP*GP*TP*G)-3'
    Chains: F, G
    Engineered: YES
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
    Other Details: RSS SIGNAL END REVERSE STRAND
    Synthetic: YES
 
Molecule 5 - 5'-D(*GP*CP*GP*AP*TP*GP*GP*TP*TP*AP*AP*CP*CP*A)-3'
    Chains: I, K
    Engineered: YES
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
    Other Details: CODING END MIMIC REVERSE STRAND (SEQUENCE IS FROM FITTED DSDNA STRUCTURES)
    Synthetic: YES
 
Molecule 6 - 5'-D(P*TP*GP*GP*TP*TP*AP*AP*CP*CP*AP*TP*CP*GP*C)-3'
    Chains: J, L
    Engineered: YES
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
    Other Details: CODING END MIMIC FORWARD STRAND (SEQUENCE IS FROM FITTED DSDNA STRUCTURES)
    Synthetic: YES

 Structural Features

(-) Chains, Units

  123456789101112
Asymmetric/Biological Unit : ABCDEFGHIJKL

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 6)

Asymmetric/Biological Unit (2, 6)
No.NameCountTypeFull Name
1MG4Ligand/IonMAGNESIUM ION
2ZN2Ligand/IonZINC ION

(-) Sites  (6, 6)

Asymmetric Unit (6, 6)
No.NameEvidenceResiduesDescription
1AC1SOFTWARECYS A:749 , CYS A:752 , HIS A:959 , HIS A:964BINDING SITE FOR RESIDUE ZN A 1101
2AC2SOFTWAREASP A:620 , GLY A:621 , GLU A:984 , DG G:15 , DC J:14BINDING SITE FOR RESIDUE MG A 1102
3AC3SOFTWAREGLY A:621 , GLU A:684 , ASP A:730 , DC J:14BINDING SITE FOR RESIDUE MG A 1103
4AC4SOFTWARECYS C:749 , CYS C:752 , HIS C:959 , HIS C:964BINDING SITE FOR RESIDUE ZN C 1101
5AC5SOFTWAREASP C:620 , GLY C:621 , ASP C:730 , GLU C:984 , DG F:15 , DC L:14BINDING SITE FOR RESIDUE MG C 1102
6AC6SOFTWAREGLY C:621 , GLU C:684 , ASP C:730 , DC L:14BINDING SITE FOR RESIDUE MG C 1103

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 3JBX)

(-) Cis Peptide Bonds  (33, 33)

Asymmetric/Biological Unit
No.Residues
1Gly A:512 -Arg A:513
2Gln A:539 -Pro A:540
3Gly A:632 -Pro A:633
4Leu A:653 -Glu A:654
5Ala A:742 -Ser A:743
6Arg A:999 -Gln A:1000
7Asp B:84 -Gly B:85
8Pro B:87 -Glu B:88
9His B:93 -Gly B:94
10Arg B:114 -Gly B:115
11Gly B:115 -Cys B:116
12Arg B:148 -Gly B:149
13Glu B:188 -Phe B:189
14Leu B:242 -Gly B:243
15Asn B:336 -Pro B:337
16Pro B:339 -Pro B:340
17Gly C:512 -Arg C:513
18Gln C:539 -Pro C:540
19Gly C:632 -Pro C:633
20Leu C:653 -Glu C:654
21Ala C:742 -Ser C:743
22Arg C:999 -Gln C:1000
23Asp D:84 -Gly D:85
24Pro D:87 -Glu D:88
25His D:93 -Gly D:94
26Arg D:114 -Gly D:115
27Gly D:115 -Cys D:116
28Gly D:131 -Asp D:132
29Arg D:148 -Gly D:149
30Glu D:188 -Phe D:189
31Leu D:242 -Gly D:243
32Asn D:336 -Pro D:337
33Pro D:339 -Pro D:340

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 3JBX)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 3JBX)

(-) Exons   (0, 0)

(no "Exon" information available for 3JBX)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:550
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhhhhh...hhhhhhhhhhhhhhh.......hhhhhhhhh..........eee..............ee................eeee.hhhhhhhhhhhhhhhhhhhhhhhh..........eeeeeeeeeeee................eeeeeeeeeeeee........eeeee.....hhhhheeeeeee....hhhhhhhhhhhhhhhhhhhh..eeeeee..eeeeeeeeeee...hhhhhhhhhh...............hhhhhhhh........hhhhhhhhhhhhhhh....hhhhhhhhh...............hhhhhhhhhhhhhhhhhhhhhh........hhhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhh.hhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                3jbx A  480 GLHPAVCLAIRVNTFLSCSQYHKMYRTVKATSGRQIFQPLHTLRNAEKELLPGFHQFEWQPALKNVSTSWDVGIIDGLSGWTVSVDDVPADTISRRFRYDVALVSALKDLEEDIMEGLRERALDDSMCTSGFTVVVKESCDGMGDVSEKHGSGPAVPEKAVRFSFTIMSISIRLEGEDDGITIFQEQKPNSELSCRPLCLMFVDESDHETLTAILGPVVAERKAMMESRLIISVGGLLRSFRFFFRGTGYDEKMVREMEGLEASGSTYICTLCDSTRAEASQNMVLHSITRSHDENLERYEIWRKNPFSESADELRDRVKGVSAKPFMETQPTLDALHCDIGNATEFYKIFQDEIGEVYQKPNPSREERRRWRSTLDKQLRKKMKLKPVMRMNGNYARRLMTREAVEAVCELVPSEERREALLKLMDLYLQMKPVWRSTCPSRDCPDQLCQYSYNSQQFADLLSSMFKYRYDGKITNYLHKTLAHVPEIVERDGSIGAWASEGNESGNKLFRRFRKMNARQSKTFELEDILKHHWLYTSKYLQKFMEAHK 1029
                                   489       499       509       519       529       539       549       559       569       579       589       599       609       619       629       639       649       659       669       679       689       699       709       719       729       739       749       759       769       779       789       799       809       819       829       839       849       859       869       879       889       899       909       919       929       939       949       959       969       979       989       999      1009      1019      1029


Chain B from PDB  Type:PROTEIN  Length:351
                                                                                                                                                                                                                                                                                                                                                                                                
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeee.............eeee....eeee.............eeeeeee..eeeeee................eeeee........eeeee..ee...ee....eeeeeeee.....eeeeeee..............eeeeeee..eeeeeee..eee.............eee....eeee......eeee.............eeee..eeee..............eeeeeee......eeeeeee..........ee......eee.............eeeeee....eeeeee.....hhhhhhh...eeeeee..eeeeeee..........eeeeeee.. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                3jbx B    1 MSLQPLTAVNCGSLVQPGFSLLDLEGDVYLFGQKGWPKRSCPTGIFGVRIKKGELKLRAISFSNNSSYLPPLRCPAIAHFEAQDGKPECYLIHGGRTPNNELSSSLYMLSVDSRGCNRKVTLRCEEKELVGDVPSARYGHTLSVINSRGKTACVLFGGRSYMPPTERTTQNWNSVVDCPPQVYLIDLEFGCCTAHTLPELTDGQSFHVALARQDCVYFLGGHILSSDCRPSRLIRLHVELLLGSPVLTCTILHEGLTITSAIASPIGYHEYIIFGGYQSETQKRMECTYVGLDDVGVHMESREPPQWTSEISHSRTWFGGSLGKGTALVAIPSEGNPTPPEAYHFYQVSFQ  351
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350 


Chain C from PDB  Type:PROTEIN  Length:550
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhhhhhh..hhhhhhhhhhhhhhh.......hhhhhhhhh..........eee..............ee.................eee.hhhhhhhhhhh.hhhhhhhhhhhh..........eeeeeeeeeeee................eeeeeeeeeeeee.........eeee.....hhhhheeeeee.....hhhhhhhhhhhhhhhhhhhh..eeeeee..eeeee.eeeee...hhhhhhhhh................hhhhhhhh........hhhhhhhhhhhhhh.....hhhhhhhhh...............hhhhhhhhhhhhhhhhhhhhhh........hhhhhhhhhhhhhhhhhhh.........hhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                3jbx C  480 GLHPAVCLAIRVNTFLSCSQYHKMYRTVKATSGRQIFQPLHTLRNAEKELLPGFHQFEWQPALKNVSTSWDVGIIDGLSGWTVSVDDVPADTISRRFRYDVALVSALKDLEEDIMEGLRERALDDSMCTSGFTVVVKESCDGMGDVSEKHGSGPAVPEKAVRFSFTIMSISIRLEGEDDGITIFQEQKPNSELSCRPLCLMFVDESDHETLTAILGPVVAERKAMMESRLIISVGGLLRSFRFFFRGTGYDEKMVREMEGLEASGSTYICTLCDSTRAEASQNMVLHSITRSHDENLERYEIWRKNPFSESADELRDRVKGVSAKPFMETQPTLDALHCDIGNATEFYKIFQDEIGEVYQKPNPSREERRRWRSTLDKQLRKKMKLKPVMRMNGNYARRLMTREAVEAVCELVPSEERREALLKLMDLYLQMKPVWRSTCPSRDCPDQLCQYSYNSQQFADLLSSMFKYRYDGKITNYLHKTLAHVPEIVERDGSIGAWASEGNESGNKLFRRFRKMNARQSKTFELEDILKHHWLYTSKYLQKFMEAHK 1029
                                   489       499       509       519       529       539       549       559       569       579       589       599       609       619       629       639       649       659       669       679       689       699       709       719       729       739       749       759       769       779       789       799       809       819       829       839       849       859       869       879       889       899       909       919       929       939       949       959       969       979       989       999      1009      1019      1029


Chain D from PDB  Type:PROTEIN  Length:351
                                                                                                                                                                                                                                                                                                                                                                                                
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee.............eeee....eeee..............eeeeee..eeeeee................eeeee........eeeeeeeee...eeeeeeeeeeeee.......eeeeeee.............eeeeeee..eeeeeee..eee.............eee...eeeee......eeeee...........eeeee..eeeee.............eeeeeee......eeeeeee..........eee.....eee.............eeeeee....eeeeee.....hhhhhhh...eeeeee..eeeeeee..........eeeeeee.. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                3jbx D    1 MSLQPLTAVNCGSLVQPGFSLLDLEGDVYLFGQKGWPKRSCPTGIFGVRIKKGELKLRAISFSNNSSYLPPLRCPAIAHFEAQDGKPECYLIHGGRTPNNELSSSLYMLSVDSRGCNRKVTLRCEEKELVGDVPSARYGHTLSVINSRGKTACVLFGGRSYMPPTERTTQNWNSVVDCPPQVYLIDLEFGCCTAHTLPELTDGQSFHVALARQDCVYFLGGHILSSDCRPSRLIRLHVELLLGSPVLTCTILHEGLTITSAIASPIGYHEYIIFGGYQSETQKRMECTYVGLDDVGVHMESREPPQWTSEISHSRTWFGGSLGKGTALVAIPSEGNPTPPEAYHFYQVSFQ  351
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350 


Chain E from PDB  Type:DNA  Length:15
                                                
                3jbx E    1 CACAGTGCTACAGAC   15
                                    10     


Chain F from PDB  Type:DNA  Length:15
                                                
                3jbx F    1 GTCTGTAGCACTGTG   15
                                    10     


Chain G from PDB  Type:DNA  Length:15
                                                
                3jbx G    1 GTCTGTAGCACTGTG   15
                                    10     


Chain H from PDB  Type:DNA  Length:15
                                                
                3jbx H    1 CACAGTGCTACAGAC   15
                                    10     


Chain I from PDB  Type:DNA  Length:14
                                               
                3jbx I    1 GCGATGGTTAACCA   14
                                    10    


Chain J from PDB  Type:DNA  Length:14
                                               
                3jbx J    1 TGGTTAACCATCGC   14
                                    10    


Chain K from PDB  Type:DNA  Length:14
                                               
                3jbx K    1 GCGATGGTTAACCA   14
                                    10    


Chain L from PDB  Type:DNA  Length:14
                                               
                3jbx L    1 TGGTTAACCATCGC   14
                                    10
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 3JBX)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 3JBX)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 3JBX)

(-) Gene Ontology  (31, 42)

Asymmetric/Biological Unit(hide GO term definitions)

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  Cis Peptide Bonds
    Ala A:742 - Ser A:743   [ RasMol ]  
    Ala C:742 - Ser C:743   [ RasMol ]  
    Arg A:999 - Gln A:1000   [ RasMol ]  
    Arg B:114 - Gly B:115   [ RasMol ]  
    Arg B:148 - Gly B:149   [ RasMol ]  
    Arg C:999 - Gln C:1000   [ RasMol ]  
    Arg D:114 - Gly D:115   [ RasMol ]  
    Arg D:148 - Gly D:149   [ RasMol ]  
    Asn B:336 - Pro B:337   [ RasMol ]  
    Asn D:336 - Pro D:337   [ RasMol ]  
    Asp B:84 - Gly B:85   [ RasMol ]  
    Asp D:84 - Gly D:85   [ RasMol ]  
    Gln A:539 - Pro A:540   [ RasMol ]  
    Gln C:539 - Pro C:540   [ RasMol ]  
    Glu B:188 - Phe B:189   [ RasMol ]  
    Glu D:188 - Phe D:189   [ RasMol ]  
    Gly A:512 - Arg A:513   [ RasMol ]  
    Gly A:632 - Pro A:633   [ RasMol ]  
    Gly B:115 - Cys B:116   [ RasMol ]  
    Gly C:512 - Arg C:513   [ RasMol ]  
    Gly C:632 - Pro C:633   [ RasMol ]  
    Gly D:115 - Cys D:116   [ RasMol ]  
    Gly D:131 - Asp D:132   [ RasMol ]  
    His B:93 - Gly B:94   [ RasMol ]  
    His D:93 - Gly D:94   [ RasMol ]  
    Leu A:653 - Glu A:654   [ RasMol ]  
    Leu B:242 - Gly B:243   [ RasMol ]  
    Leu C:653 - Glu C:654   [ RasMol ]  
    Leu D:242 - Gly D:243   [ RasMol ]  
    Pro B:339 - Pro B:340   [ RasMol ]  
    Pro B:87 - Glu B:88   [ RasMol ]  
    Pro D:339 - Pro D:340   [ RasMol ]  
    Pro D:87 - Glu D:88   [ RasMol ]  
 

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(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        Q1RLW7_DANRE | Q1RLW7: 3jbw 3jby
        RAG1_DANRE | O13033: 3jbw 3jby
        RAG2_DANRE | O13034: 3jbw 3jby

(-) Related Entries Specified in the PDB File

3jbw 3jby