Chain A from PDB Type:RNA Length:59
3izz A 47 CCUAACACAUGCCUCCUACGGGAGGCAGUGGGUUGCACAAUGGGCGCAAGCCUGAUGCA 393
56 || 346 || 359 || 374 384
58| 350| 361|
339 354 367
Chain B from PDB Type:RNA Length:118
3izz B 1906 GGCCGUAACUAUAACGGUCUCGGGUAAGUUCCGACUGAUACCGCCCAAGAGUUCAUAUCGACGGCGGUGUUUGGAUGGCUGUUCGCCAUCUGCUCCUAGUACGAGAGGACCGGAGUGG 2674
1915 1946 1956 || 2461 2471 2481 2491 || 2552 2646 2656 2666
1924| 1960| 2495| 2561|
1946 2456 2547 2646
Chain D from PDB Type:RNA Length:60
3izz D 1 GUGCCAGCAGCCGCGGUAAUACGGAGGGCGCGAGCGUUACCCGGAUUCACUGGGCGUAAA 60
10 20 30 40 50 60
Chain E from PDB Type:RNA Length:100
3izz E 1 CACCGCCCGUCACGCCAUGGGAGCGGGCUCUACCCGAAGUCGCCGGGAGCCUACGGGCAGGCGCCGAGGGUAGGGCCCGUGACUGGGGCGAAGUCGUAAC 100
10 20 30 40 50 60 70 80 90 100
Chain F from PDB Type:PROTEIN Length:124
SCOP domains ---------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains ---------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .hhhhhhhhh..................eeeeeee..ee.........eeeeeeee....eeeee............eeee............ee................hhhhhh....... Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------------------- Transcript
3izz F 1 PTINQLVRKGREKVRKKSKVPALKGAPFRRGVCTVVRTVTPKKPNSALRKVAKVRLTSGYEVTAYIPGEGHNLQEHSVVLIRGGRVKDLPGVRYHIVRGVYDAAGVKDRKKSRSKYGTKKPKEA 124
10 20 30 40 50 60 70 80 90 100 110 120
Chain G from PDB Type:PROTEIN Length:121
aligned with RL14_ECOLI | P0ADY3 from UniProtKB/Swiss-Prot Length:123
Alignment length:121
11 21 31 41 51 61 71 81 91 101 111 121
RL14_ECOLI 2 IQEQTMLNVADNSGARRVMCIKVLGGSHRRYAGVGDIIKITIKEAIPRGKVKKGDVLKAVVVRTKKGVRRPDGSVIRFDGNACVLLNNNSEQPIGTRIFGPVTRELRSEKFMKIISLAPEV 122
SCOP domains ------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains ------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .....eee........eee..................eeee..............eeee........ee.....ee........ee..........................hhhhh.... Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------RIBOSOMAL_L14 PDB: G:60-86------------------------------------ PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------- Transcript
3izz G 2 IQEQTMLNVADNSGARRVMCIKVLGGSHRRYAGVGDIIKITIKEAIPRGKVKKGDVLKAVVVRTKKGVRRPDGSVIRFDGNACVLLNNNSEQPIGTRIFGPVTRELRSEKFMKIISLAPEV 122
11 21 31 41 51 61 71 81 91 101 111 121
Legend: |
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→ Mismatch |
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→ Gap |
(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |