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(-) Description

Title :  CRYSTAL STRUCTURE OF THE Q251Q8_DESHY PROTEIN FROM DESULFITOBACTERIUM HAFNIENSE. NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET DHR8C.
 
Authors :  S. M. Vorobiev, Y. Chen, J. Seetharaman, H. Janjua, R. Xiao, C. Ciccosan H. Wang, J. K. Everett, R. Nair, T. B. Acton, B. Rost, I. Andre, P. Rossi, M. Kennedy, G. T. Montelione, J. F. Hunt, L. Tong, Northeast Structur Genomics Consortium (Nesg)
Date :  17 Aug 09  (Deposition) - 15 Sep 09  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.99
Chains :  Asym. Unit :  A,B
Biol. Unit 1:  A,B  (1x)
Biol. Unit 2:  A  (1x)
Biol. Unit 3:  B  (1x)
Keywords :  Q251Q8_deshy, Nesg, Dhr8C, Structural Genomics, Psi-2, Protein Structure Initiative, Northeast Structural Genomics Consortium, Unknown Function (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  S. M. Vorobiev, Y. Chen, J. Seetharaman, H. Janjua, R. Xiao, C. Ciccosanti, H. Wang, J. K. Everett, R. Nair, T. B. Acton, B. Rost, I. Andre, P. Rossi, M. Kennedy, G. T. Montelione, J. F. Hunt, L. Tong
Crystal Structure Of The Q251Q8_deshy Protein From Desulfitobacterium Hafniense.
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - UNCHARACTERIZED PROTEIN
    Chains: A, B
    Engineered: YES
    Expression System: ESCHERICHIA COLI BL21(DE3)
    Expression System Plasmid: PET 21-23C
    Expression System Strain: BL21(DE3) +MAGIC
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Fragment: RESIDUES 20-82
    Gene: DSY0195
    Organism Scientific: DESULFITOBACTERIUM HAFNIENSE
    Organism Taxid: 138119
    Strain: Y51

 Structural Features

(-) Chains, Units

  12
Asymmetric Unit : AB
Biological Unit 1 (1x): AB
Biological Unit 2 (1x): A 
Biological Unit 3 (1x):  B

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 3IPF)

(-) Sites  (0, 0)

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(-) SS Bonds  (0, 0)

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(-) Cis Peptide Bonds  (2, 2)

Asymmetric Unit
No.Residues
1Tyr A:81 -Pro A:82
2Tyr B:81 -Pro B:82

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

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(-) PROSITE Motifs  (0, 0)

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(-) Sequences/Alignments

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SAPs(SNPs) PROSITE motifs Exons
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Chain A from PDB  Type:PROTEIN  Length:69
 aligned with Q251Q8_DESHY | Q251Q8 from UniProtKB/TrEMBL  Length:97

    Alignment length:69
                                    31        41        51        61        71        81         
          Q251Q8_DESHY   22 NRQFLSLTGVSKVQSFDPKEILLETIQGVLSIKGEKLGIKHLDLKAGQVEVEGLIDALVYPRNSGSRQN 90
               SCOP domains --------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeee..eeeeeeee..eeeeee..eeeeeeeeeeeeeeee....eeeeeeeeeeeee..hhhhh.. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------- Transcript
                  3ipf A 22 NRQFLSLTGVSKVQSFDPKEILLETIQGVLSIKGEKLGIKHLDLKAGQVEVEGLIDALVYPLEHHHHHH 90
                                    31        41        51        61        71        81         


Chain B from PDB  Type:PROTEIN  Length:65
 aligned with Q251Q8_DESHY | Q251Q8 from UniProtKB/TrEMBL  Length:97

    Alignment length:65
                                    31        41        51        61        71        81     
          Q251Q8_DESHY   22 NRQFLSLTGVSKVQSFDPKEILLETIQGVLSIKGEKLGIKHLDLKAGQVEVEGLIDALVYPRNSG 86
               SCOP domains ----------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeee....eeeeee..eeeeee..eeeeeeeeeeeeeeee....eeeeeeeeeeeeehhhhh Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------- Transcript
                  3ipf B 22 NRQFLSLTGVSKVQSFDPKEILLETIQGVLSIKGEKLGIKHLDLKAGQVEVEGLIDALVYPLEHH 86
                                    31        41        51        61        71        81
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 3IPF)

(-) CATH Domains  (0, 0)

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(-) Pfam Domains  (0, 0)

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(-) Gene Ontology  (0, 0)

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  Cis Peptide Bonds
    Tyr A:81 - Pro A:82   [ RasMol ]  
    Tyr B:81 - Pro B:82   [ RasMol ]  
 
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 Related Entries

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UniProtKB/TrEMBL
        Q251Q8_DESHY | Q251Q8: 2ks0 2kyi

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