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(-) Description

Title :  CRYSTAL STRUCTURE OF THE BTB-BACK DOMAINS OF HUMAN KLHL11
 
Authors :  J. W. Murray, C. D. O. Cooper, T. Krojer, P. Mahajan, E. Salah, T. Keates, P. Savitsky, A. C. W. Pike, A. Roos, J. Muniz, F. Von Delft, C. Bountra, C. H. Arrowsmith, J. Weigelt, A. Edwards, S. Knapp, A. Bullock, Structural Genomics Consortium (Sgc)
Date :  30 Jun 09  (Deposition) - 04 Aug 09  (Release) - 22 Sep 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.60
Chains :  Asym./Biol. Unit :  A,B
Keywords :  Structural Genomics, Btb, Klhl11A, Sgc, Structural Genomics Consortium, Kelch Repeat, Secreted, Protein Binding (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  J. W. Murray, C. D. O. Cooper, T. Krojer, P. Mahajan, E. Salah, T. Keates, P. Savitsky, A. C. W. Pike, A. Roos, J. Muniz, F. Von Delft, C. Bountra, C. H. Arrowsmith, J. Weigelt, A. Edwards, S. Knapp, A. Bullock, Structural Genomics Consortium (Sgc)
Crystal Structure Of The Btb-Back Domains Of Human Klhl11
To Be Published
PubMed: search
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - KELCH-LIKE PROTEIN 11
    Chains: A, B
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Fragment: BTB-BACK DOMAINS (UNP RESIDUES 67-340)
    Gene: KLHL11, KLHL11A
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606

 Structural Features

(-) Chains, Units

  12
Asymmetric/Biological Unit : AB

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (3, 16)

Asymmetric/Biological Unit (3, 16)
No.NameCountTypeFull Name
1CL3Ligand/IonCHLORIDE ION
2MSE12Mod. Amino AcidSELENOMETHIONINE
3SCN1Ligand/IonTHIOCYANATE ION

(-) Sites  (2, 2)

Asymmetric Unit (2, 2)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREASP A:95 , ARG A:112 , SER A:113 , ASP B:95 , SER B:113BINDING SITE FOR RESIDUE SCN A 6788
2AC2SOFTWARETHR B:170BINDING SITE FOR RESIDUE CL B 3

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 3I3N)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 3I3N)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 3I3N)

(-) PROSITE Motifs  (1, 2)

Asymmetric/Biological Unit (1, 2)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1BTBPS50097 BTB domain profile.KLH11_HUMAN94-170
 		  2A:94-170
B:94-170

(-) Exons   (0, 0)

(no "Exon" information available for 3I3N)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:262
 aligned with KLH11_HUMAN | Q9NVR0 from UniProtKB/Swiss-Prot  Length:708

    Alignment length:314
                                    31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331    
          KLH11_HUMAN    22 EMESMETAAAGSAGLAAEVRGSGTVDFGPGPGISAMEASGGDPGPEAEDFECSSHCSELSWRQNEQRRQGLFCDITLCFGGAGGREFRAHRSVLAAATEYFTPLLSGQFSESRSGRVEMRKWSSEPGPEPDTVEAVIEYMYTGRIRVSTGSVHEVLELADRFLLIRLKEFCGEFLKKKLHLSNCVAIHSLAHMYTLSQLALKAADMIRRNFHKVIQDEEFYTLPFHLIRDWLSDLEITVDSEEVLFETVLKWVQRNAEERERYFEELFKLLRLSQMKPTYLTRHVKPERLVANNEVCVKLVADAVERHALRAEN 335
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......----------------------------------------eeeee..hhhhhhhhhhhhhhhh.....eeee.----..eeeehhhhhhhhh..hhhhh--------..eee..........hhhhhhhhhhhhhhheeeee..hhhhhhhhhhhh.hhhhhhhhhhhhhhhh...hhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------BTB  PDB: A:94-170 UniProt: 94-170                                           --------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3i3n A  -4 YFQSmE----------------------------------------AEDFECSSHCSELSWRQNEQRRQGLFCDITLCF----GREFRAHRSVLAAATEYFTPLL--------SGRVEmRKWSSEPGPEPDTVEAVIEYmYTGRIRVSTGSVHEVLELADRFLLIRLKEFCGEFLKKKLHLSNCVAIHSLAHmYTLSQLALKAADmIRRNFHKVIQDEEFYTLPFHLIRDWLSDLEITVDSEEVLFETVLKWVQRNAEERERYFEELFKLLRLSQmKPTYLTRHVKPERLVANNEVCVKLVADAVERHALRAEN 335
                                ||   -         -         -         -      | 71        81        91        |-   |   111       121    |    -   |   141       151       161       171       181       191       201       211  |    221     | 231       241       251       261       271       281       291     | 301       311       321       331    
                                ||                                       68                             100  105                  126      135    |                  161-MSE                                              214-MSE      227-MSE                                                               297-MSE                                  
                                0-MSE                                                                                                           140-MSE                                                                                                                                                                                               
                                67                                                                                                                                                                                                                                                                                                                    


Chain B from PDB  Type:PROTEIN  Length:267
 aligned with KLH11_HUMAN | Q9NVR0 from UniProtKB/Swiss-Prot  Length:708

    Alignment length:279
                                    65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325         
          KLH11_HUMAN    56 AMEASGGDPGPEAEDFECSSHCSELSWRQNEQRRQGLFCDITLCFGGAGGREFRAHRSVLAAATEYFTPLLSGQFSESRSGRVEMRKWSSEPGPEPDTVEAVIEYMYTGRIRVSTGSVHEVLELADRFLLIRLKEFCGEFLKKKLHLSNCVAIHSLAHMYTLSQLALKAADMIRRNFHKVIQDEEFYTLPFHLIRDWLSDLEITVDSEEVLFETVLKWVQRNAEERERYFEELFKLLRLSQMKPTYLTRHVKPERLVANNEVCVKLVADAVERHALRAE 334
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...e---------eeee..hhhhhhhhhhhhhhhh.....eeee..---..eeeehhhhhhhhh..hhhhh..........eee..........hhhhhhhhhhhhhhheeeee..hhhhhhhhhhhh.hhhhhhhhhhhhhhhh...hhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------BTB  PDB: B:94-170 UniProt: 94-170                                           -------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3i3n B  -1 SmEA---------EDFECSSHCSELSWRQNEQRRQGLFCDITLCFG---GREFRAHRSVLAAATEYFTPLLSGQFSESRSGRVEmRKWSSEPGPEPDTVEAVIEYmYTGRIRVSTGSVHEVLELADRFLLIRLKEFCGEFLKKKLHLSNCVAIHSLAHmYTLSQLALKAADmIRRNFHKVIQDEEFYTLPFHLIRDWLSDLEITVDSEEVLFETVLKWVQRNAEERERYFEELFKLLRLSQmKPTYLTRHVKPERLVANNEVCVKLVADAVERHALRAE 334
                             |||     -   |    75        85        95     | 105       115       125       135    |  145       155     | 165       175       185       195       205       215       225 |     235       245       255       265       275       285       295 |     305       315       325         
                             0-MSE      69                             101 105                                140-MSE              161-MSE                                              214-MSE      227-MSE                                                               297-MSE                                 
                             67|                                                                                                                                                                                                                                                                                   
                              68
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 3I3N)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 3I3N)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 3I3N)

(-) Gene Ontology  (0, 0)

Asymmetric/Biological Unit(hide GO term definitions)
    (no "Gene Ontology" information available for 3I3N)

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UniProtKB/Swiss-Prot
        KLH11_HUMAN | Q9NVR0: 4ap2 4apf

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