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(-) Description

Title :  CRYSTAL STRUCTURE OF A TRUNCATED ACETYL-COA SYNTHASE
 
Authors :  A. Volbeda, C. Darnault, J. C. Fontecilla-Camps
Date :  06 Mar 09  (Deposition) - 06 Oct 09  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  3.00
Chains :  Asym. Unit :  A,B,C,D,E,F
Biol. Unit 1:  A  (1x)
Biol. Unit 2:  B  (1x)
Biol. Unit 3:  C  (1x)
Biol. Unit 4:  D  (1x)
Biol. Unit 5:  E  (1x)
Biol. Unit 6:  F  (1x)
Biol. Unit 7:  A,B,C,D,E,F  (1x)
Keywords :  Acetyltransferase, Carbon Dioxide Fixation, Iron, Iron-Sulfur, Metal- Binding, Nickel, Transferase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  A. Volbeda, C. Darnault, X. Tan, P. A. Lindahl, J. C. Fontecilla-Camps
Novel Domain Arrangement In The Crystal Structure Of A Truncated Acetyl-Coa Synthase From Moorella Thermoacetica
Biochemistry V. 48 7916 2009
PubMed-ID: 19650626  |  Reference-DOI: 10.1021/BI9003952

(-) Compounds

Molecule 1 - CARBON MONOXIDE DEHYDROGENASE/ACETYL-COA SYNTHASE SUBUNIT ALPHA
    Chains: A, B, C, D, E, F
    EC Number: 2.3.1.169
    Engineered: YES
    Expression System: ESCHERICHIA COLI BL21(DE3)
    Expression System Plasmid: PLHK07
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Fragment: TRUNCATED DOMAIN, RESIDUES 311-729
    Gene: ACSB2
    Organism Scientific: MOORELLA THERMOACETICA
    Organism Taxid: 1525
    Synonym: CODH/ACS, ACETYL-COA SYNTHASE SUBUNIT, ACS SUBUNIT

 Structural Features

(-) Chains, Units

  123456
Asymmetric Unit : ABCDEF
Biological Unit 1 (1x): A     
Biological Unit 2 (1x):  B    
Biological Unit 3 (1x):   C   
Biological Unit 4 (1x):    D  
Biological Unit 5 (1x):     E 
Biological Unit 6 (1x):      F
Biological Unit 7 (1x): ABCDEF

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (5, 48)

Asymmetric Unit (5, 48)
No.NameCountTypeFull Name
1GOL6Ligand/IonGLYCEROL
2H2S6Ligand/IonHYDROSULFURIC ACID
3SF46Ligand/IonIRON/SULFUR CLUSTER
4SO424Ligand/IonSULFATE ION
5ZN6Ligand/IonZINC ION
Biological Unit 1 (4, 8)
No.NameCountTypeFull Name
1GOL1Ligand/IonGLYCEROL
2H2S1Ligand/IonHYDROSULFURIC ACID
3SF41Ligand/IonIRON/SULFUR CLUSTER
4SO45Ligand/IonSULFATE ION
5ZN-1Ligand/IonZINC ION
Biological Unit 2 (4, 7)
No.NameCountTypeFull Name
1GOL1Ligand/IonGLYCEROL
2H2S1Ligand/IonHYDROSULFURIC ACID
3SF41Ligand/IonIRON/SULFUR CLUSTER
4SO44Ligand/IonSULFATE ION
5ZN-1Ligand/IonZINC ION
Biological Unit 3 (4, 7)
No.NameCountTypeFull Name
1GOL1Ligand/IonGLYCEROL
2H2S1Ligand/IonHYDROSULFURIC ACID
3SF41Ligand/IonIRON/SULFUR CLUSTER
4SO44Ligand/IonSULFATE ION
5ZN-1Ligand/IonZINC ION
Biological Unit 4 (4, 7)
No.NameCountTypeFull Name
1GOL1Ligand/IonGLYCEROL
2H2S1Ligand/IonHYDROSULFURIC ACID
3SF41Ligand/IonIRON/SULFUR CLUSTER
4SO44Ligand/IonSULFATE ION
5ZN-1Ligand/IonZINC ION
Biological Unit 5 (4, 6)
No.NameCountTypeFull Name
1GOL1Ligand/IonGLYCEROL
2H2S1Ligand/IonHYDROSULFURIC ACID
3SF41Ligand/IonIRON/SULFUR CLUSTER
4SO43Ligand/IonSULFATE ION
5ZN-1Ligand/IonZINC ION
Biological Unit 6 (4, 7)
No.NameCountTypeFull Name
1GOL1Ligand/IonGLYCEROL
2H2S1Ligand/IonHYDROSULFURIC ACID
3SF41Ligand/IonIRON/SULFUR CLUSTER
4SO44Ligand/IonSULFATE ION
5ZN-1Ligand/IonZINC ION
Biological Unit 7 (4, 42)
No.NameCountTypeFull Name
1GOL6Ligand/IonGLYCEROL
2H2S6Ligand/IonHYDROSULFURIC ACID
3SF46Ligand/IonIRON/SULFUR CLUSTER
4SO424Ligand/IonSULFATE ION
5ZN-1Ligand/IonZINC ION

(-) Sites  (48, 48)

Asymmetric Unit (48, 48)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREARG A:405 , CYS A:506 , CYS A:509 , CYS A:518 , LEU A:527 , CYS A:528 , VAL A:531 , ZN A:739BINDING SITE FOR RESIDUE SF4 A 738
02AC2SOFTWARECYS A:509 , CYS A:595 , CYS A:597 , SF4 A:738 , H2S A:740BINDING SITE FOR RESIDUE ZN A 739
03AC3SOFTWARECYS A:595 , GLY A:596 , CYS A:597 , ZN A:739BINDING SITE FOR RESIDUE H2S A 740
04AC4SOFTWAREPRO A:377 , GLU A:378 , LYS E:335 , LYS E:381BINDING SITE FOR RESIDUE SO4 A 741
05AC5SOFTWAREGLU A:554 , GLY A:555 , GLU A:556BINDING SITE FOR RESIDUE SO4 A 742
06AC6SOFTWAREILE A:333 , TRP A:418 , SO4 A:744 , HOH A:759BINDING SITE FOR RESIDUE GOL A 743
07AC7SOFTWAREARG A:334 , LYS A:335 , ARG A:429 , GOL A:743BINDING SITE FOR RESIDUE SO4 A 744
08AC8SOFTWAREARG A:354 , TYR A:477BINDING SITE FOR RESIDUE SO4 A 745
09AC9SOFTWARELYS A:335 , LYS A:381 , PRO F:377 , GLU F:378BINDING SITE FOR RESIDUE SO4 A 746
10BC1SOFTWAREARG B:405 , CYS B:506 , CYS B:509 , CYS B:518 , LEU B:527 , CYS B:528 , ZN B:739BINDING SITE FOR RESIDUE SF4 B 738
11BC2SOFTWARECYS B:509 , CYS B:595 , CYS B:597 , SF4 B:738 , H2S B:740BINDING SITE FOR RESIDUE ZN B 739
12BC3SOFTWARECYS B:595 , GLY B:596 , CYS B:597 , ZN B:739BINDING SITE FOR RESIDUE H2S B 740
13BC4SOFTWAREGLU B:554 , GLY B:555 , GLU B:556BINDING SITE FOR RESIDUE SO4 B 742
14BC5SOFTWARESER B:332 , ILE B:333 , TRP B:418 , TRP B:427 , HOH B:758 , HOH B:759BINDING SITE FOR RESIDUE GOL B 743
15BC6SOFTWAREILE B:333 , ARG B:334 , LYS B:335 , ARG B:429 , HOH B:756BINDING SITE FOR RESIDUE SO4 B 744
16BC7SOFTWAREARG B:354 , TYR B:477BINDING SITE FOR RESIDUE SO4 B 745
17BC8SOFTWARELYS B:335 , LYS B:381 , PRO C:377 , GLU C:378BINDING SITE FOR RESIDUE SO4 B 741
18BC9SOFTWAREARG C:405 , CYS C:506 , CYS C:509 , CYS C:518 , GLY C:526 , LEU C:527 , CYS C:528 , VAL C:531 , ZN C:739BINDING SITE FOR RESIDUE SF4 C 738
19CC1SOFTWARECYS C:509 , CYS C:595 , CYS C:597 , SF4 C:738 , H2S C:740BINDING SITE FOR RESIDUE ZN C 739
20CC2SOFTWARECYS C:509 , CYS C:595 , GLY C:596 , CYS C:597 , ZN C:739BINDING SITE FOR RESIDUE H2S C 740
21CC3SOFTWAREGLU C:554 , GLY C:555 , GLU C:556BINDING SITE FOR RESIDUE SO4 C 742
22CC4SOFTWARESER C:332 , ILE C:333 , TRP C:418BINDING SITE FOR RESIDUE GOL C 743
23CC5SOFTWAREARG C:334 , LYS C:335 , ARG C:429 , HOH C:756BINDING SITE FOR RESIDUE SO4 C 744
24CC6SOFTWAREARG C:354 , TYR C:477BINDING SITE FOR RESIDUE SO4 C 745
25CC7SOFTWARELYS C:335 , LYS C:381 , PRO D:377 , GLU D:378BINDING SITE FOR RESIDUE SO4 C 741
26CC8SOFTWAREPRO B:377 , GLU B:378 , LYS D:335 , LYS D:381BINDING SITE FOR RESIDUE SO4 D 741
27CC9SOFTWAREARG D:405 , CYS D:506 , CYS D:509 , CYS D:518 , GLY D:526 , LEU D:527 , CYS D:528 , ZN D:739BINDING SITE FOR RESIDUE SF4 D 738
28DC1SOFTWARECYS D:509 , CYS D:595 , CYS D:597 , SF4 D:738 , H2S D:740BINDING SITE FOR RESIDUE ZN D 739
29DC2SOFTWARECYS D:509 , CYS D:595 , GLY D:596 , CYS D:597 , ZN D:739BINDING SITE FOR RESIDUE H2S D 740
30DC3SOFTWAREGLU D:554 , GLY D:555 , GLU D:556BINDING SITE FOR RESIDUE SO4 D 742
31DC4SOFTWARESER D:332 , ILE D:333 , TRP D:418 , TRP D:427 , ARG D:429 , HOH D:758BINDING SITE FOR RESIDUE GOL D 743
32DC5SOFTWAREILE D:333 , ARG D:334 , LYS D:335 , ARG D:429 , HOH D:756BINDING SITE FOR RESIDUE SO4 D 744
33DC6SOFTWAREARG D:354 , TYR D:477BINDING SITE FOR RESIDUE SO4 D 745
34DC7SOFTWAREARG E:405 , CYS E:506 , CYS E:509 , CYS E:518 , GLY E:526 , LEU E:527 , CYS E:528 , VAL E:531 , ZN E:739BINDING SITE FOR RESIDUE SF4 E 738
35DC8SOFTWARECYS E:509 , CYS E:595 , CYS E:597 , SF4 E:738 , H2S E:740BINDING SITE FOR RESIDUE ZN E 739
36DC9SOFTWARECYS E:509 , CYS E:595 , GLY E:596 , CYS E:597 , ZN E:739BINDING SITE FOR RESIDUE H2S E 740
37EC1SOFTWAREGLU E:554 , GLY E:555 , GLU E:556BINDING SITE FOR RESIDUE SO4 E 742
38EC2SOFTWARESER E:332 , ILE E:333 , TRP E:418 , TRP E:427 , ARG E:429 , SO4 E:744 , HOH E:759BINDING SITE FOR RESIDUE GOL E 743
39EC3SOFTWAREARG E:334 , LYS E:335 , ARG E:429 , GOL E:743BINDING SITE FOR RESIDUE SO4 E 744
40EC4SOFTWAREARG E:354 , TYR E:477BINDING SITE FOR RESIDUE SO4 E 745
41EC5SOFTWAREPRO E:377 , GLU E:378 , LYS F:335 , LYS F:381BINDING SITE FOR RESIDUE SO4 F 741
42EC6SOFTWAREARG F:405 , CYS F:506 , CYS F:509 , CYS F:518 , LEU F:527 , CYS F:528 , VAL F:531BINDING SITE FOR RESIDUE SF4 F 738
43EC7SOFTWARECYS F:509 , CYS F:595 , CYS F:597 , H2S F:740BINDING SITE FOR RESIDUE ZN F 739
44EC8SOFTWARECYS F:595 , GLY F:596 , CYS F:597 , ZN F:739BINDING SITE FOR RESIDUE H2S F 740
45EC9SOFTWAREGLU F:554 , GLY F:555 , GLU F:556BINDING SITE FOR RESIDUE SO4 F 742
46FC1SOFTWARESER F:332 , ILE F:333 , TRP F:418 , TRP F:427 , ARG F:429 , SO4 F:744 , HOH F:759BINDING SITE FOR RESIDUE GOL F 743
47FC2SOFTWAREARG F:334 , LYS F:335 , ARG F:429 , GOL F:743BINDING SITE FOR RESIDUE SO4 F 744
48FC3SOFTWAREARG F:354 , TYR F:477BINDING SITE FOR RESIDUE SO4 F 745

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 3GIT)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 3GIT)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 3GIT)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 3GIT)

(-) Exons   (0, 0)

(no "Exon" information available for 3GIT)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:422
 aligned with DCMA_MOOTH | P27988 from UniProtKB/Swiss-Prot  Length:729

    Alignment length:422
                                                                                                                                                                                                                                                                                                                                                                                                                                                       729        
                                   325       335       345       355       365       375       385       395       405       415       425       435       445       455       465       475       485       495       505       515       525       535       545       555       565       575       585       595       605       615       625       635       645       655       665       675       685       695       705       715       725   |     -  
           DCMA_MOOTH   316 IKLDLPINFGPAFEGESIRKGDMYVEMGGNRTPAFELVRTVSESEITDGKIEVIGPDIDQIPEGSKLPLGILVDIYGRKMQADFEGVLERRIHDFINYGEGLWHTGQRNINWLRVSKDAVAKGFRFKNYGEILVAKMKEEFPAIVDRVQVTIFTDEAKVKEYMEVAREKYKERDDRMRGLTDETVDTFYSCVLCQSFAPNHVCIVTPERVGLCGAVSWLDAKASYEINHAGPNQPIPKEGEIDPIKGIWKSVNDYLYTASNRNLEQVCLYTLMENPMTSCGCFEAIMAILPECNGIMITTRDHAGMTPSGMTFSTLAGMIGGGTQTPGFMGIGRTYIVSKKFISADGGIARIVWMPKSLKDFLHDEFVRRSVEEGLGEDFIDKIADETIGTTVDEILPYLEEKGHPALTMDPIM--------   -
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .........hhhhh....hhh.eeeeee.....eeeeeee.hhhhh....eeee..........eee.eeeeeeee....hhhhhhhhhhhhhhhhhh...eeeeee..eeeeeeehhhhhhh..hhhhhhhhhhhhhhhh.....eeeeeee.hhhhhhhhhhhhhhhhhhhhhhhh........eeeee.hhhhh.....eee...........hhhhhhhhhhhh....eeeee...eee....eehhhhhhhhhhh........................eeeeeehhhheeeeee...........hhhhhhhhhh.......eeeehhhhhhh...hhhhhhhh.eee.hhhhhhhhhhhhhhhhhhh....hhhhhh.......hhhhhhhhhhhhhhhhhhh.hhhhhh..... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3git A 316 IKLDLPINFGPAFEGESIRKGDMYVEMGGNRTPAFELVRTVSESEITDGKIEVIGPDIDQIPEGSKLPLGILVDIYGRKMQADFEGVLERRIHDFINYGEGLWHTGQRNINWLRVSKDAVAKGFRFKNYGEILVAKMKEEFPAIVDRVQVTIFTDEAKVKEYMEVAREKYKERDDRMRGLTDETVDTFYSCVLCQSFAPNHVCIVTPERVGLCGAVSWLDAKASYEINHAGPNQPIPKEGEIDPIKGIWKSVNDYLYTASNRNLEQVCLYTLMENPMTSCGCFEAIMAILPECNGIMITTRDHAGMTPSGMTFSTLAGMIGGGTQTPGFMGIGRTYIVSKKFISADGGIARIVWMPKSLKDFLHDEVVRRSVEEGLGEDFIDKIADETIGTTVDEILPYLEEKGHPALTMDPIMRSHTSRGH 737
                                   325       335       345       355       365       375       385       395       405       415       425       435       445       455       465       475       485       495       505       515       525       535       545       555       565       575       585       595       605       615       625       635       645       655       665       675       685       695       705       715       725       735  


Chain B from PDB  Type:PROTEIN  Length:421
 aligned with DCMA_MOOTH | P27988 from UniProtKB/Swiss-Prot  Length:729

    Alignment length:421
                                                                                                                                                                                                                                                                                                                                                                                                                                                       729       
                                   325       335       345       355       365       375       385       395       405       415       425       435       445       455       465       475       485       495       505       515       525       535       545       555       565       575       585       595       605       615       625       635       645       655       665       675       685       695       705       715       725   |     - 
           DCMA_MOOTH   316 IKLDLPINFGPAFEGESIRKGDMYVEMGGNRTPAFELVRTVSESEITDGKIEVIGPDIDQIPEGSKLPLGILVDIYGRKMQADFEGVLERRIHDFINYGEGLWHTGQRNINWLRVSKDAVAKGFRFKNYGEILVAKMKEEFPAIVDRVQVTIFTDEAKVKEYMEVAREKYKERDDRMRGLTDETVDTFYSCVLCQSFAPNHVCIVTPERVGLCGAVSWLDAKASYEINHAGPNQPIPKEGEIDPIKGIWKSVNDYLYTASNRNLEQVCLYTLMENPMTSCGCFEAIMAILPECNGIMITTRDHAGMTPSGMTFSTLAGMIGGGTQTPGFMGIGRTYIVSKKFISADGGIARIVWMPKSLKDFLHDEFVRRSVEEGLGEDFIDKIADETIGTTVDEILPYLEEKGHPALTMDPIM-------   -
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .........hhhhh....hhh.eeeeee.....eeeeeee.hhhhh....eeee..hhhhh.......eeeeeeee....hhhhhhhhhhhhhhhhhh...eeeeee..eeeeeeehhhhhhh..hhhhhhhhhhhhhhhh.....eeeeeee.hhhhhhhhhhhhhhhhhhhhhhhh........eeeee.hhhhh.....eee...........hhhhhhhhhhhh....eeeee...eee....eehhhhhhhhhhh........................eeeeeehhhheeeeee...........hhhhhhhhhh.......eeeehhhhhhh...hhhhhhhh.eee.hhhhhhhhhhhhhhhhhhh....hhhhhh.......hhhhhhhhhhhh.hhhhhh.hhhhhh.... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3git B 316 IKLDLPINFGPAFEGESIRKGDMYVEMGGNRTPAFELVRTVSESEITDGKIEVIGPDIDQIPEGSKLPLGILVDIYGRKMQADFEGVLERRIHDFINYGEGLWHTGQRNINWLRVSKDAVAKGFRFKNYGEILVAKMKEEFPAIVDRVQVTIFTDEAKVKEYMEVAREKYKERDDRMRGLTDETVDTFYSCVLCQSFAPNHVCIVTPERVGLCGAVSWLDAKASYEINHAGPNQPIPKEGEIDPIKGIWKSVNDYLYTASNRNLEQVCLYTLMENPMTSCGCFEAIMAILPECNGIMITTRDHAGMTPSGMTFSTLAGMIGGGTQTPGFMGIGRTYIVSKKFISADGGIARIVWMPKSLKDFLHDEVVRRSVEEGLGEDFIDKIADETIGTTVDEILPYLEEKGHPALTMDPIMRSHTSRG 736
                                   325       335       345       355       365       375       385       395       405       415       425       435       445       455       465       475       485       495       505       515       525       535       545       555       565       575       585       595       605       615       625       635       645       655       665       675       685       695       705       715       725       735 


Chain C from PDB  Type:PROTEIN  Length:421
 aligned with DCMA_MOOTH | P27988 from UniProtKB/Swiss-Prot  Length:729

    Alignment length:421
                                                                                                                                                                                                                                                                                                                                                                                                                                                       729       
                                   325       335       345       355       365       375       385       395       405       415       425       435       445       455       465       475       485       495       505       515       525       535       545       555       565       575       585       595       605       615       625       635       645       655       665       675       685       695       705       715       725   |     - 
           DCMA_MOOTH   316 IKLDLPINFGPAFEGESIRKGDMYVEMGGNRTPAFELVRTVSESEITDGKIEVIGPDIDQIPEGSKLPLGILVDIYGRKMQADFEGVLERRIHDFINYGEGLWHTGQRNINWLRVSKDAVAKGFRFKNYGEILVAKMKEEFPAIVDRVQVTIFTDEAKVKEYMEVAREKYKERDDRMRGLTDETVDTFYSCVLCQSFAPNHVCIVTPERVGLCGAVSWLDAKASYEINHAGPNQPIPKEGEIDPIKGIWKSVNDYLYTASNRNLEQVCLYTLMENPMTSCGCFEAIMAILPECNGIMITTRDHAGMTPSGMTFSTLAGMIGGGTQTPGFMGIGRTYIVSKKFISADGGIARIVWMPKSLKDFLHDEFVRRSVEEGLGEDFIDKIADETIGTTVDEILPYLEEKGHPALTMDPIM-------   -
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .........hhhhh....hhh.eeeeee.....eeeeeee.hhhhh....eeee..hhhhh...ee..eeeeeeee....hhhhhhhhhhhhhhhhhh...eeeeee..eeeeeeehhhhhhh..hhhhhhhhhhhhhhhh.....eeeeeee.hhhhhhhhhhhhhhhhhhhhhhhh........eeeee.hhhhh.....eee...........hhhhhhhhhhhh....eeeee...eee....eehhhhhhhhhhh........................eeeeeehhhheeeeee...........hhhhhhhhhh.......eeeehhhhhhh...hhhhhhhh.eee.hhhhhhhhhhhhhhhhhhh....hhhhhh.......hhhhhhhhhhhh.hhhhhh.hhhhhh.... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3git C 316 IKLDLPINFGPAFEGESIRKGDMYVEMGGNRTPAFELVRTVSESEITDGKIEVIGPDIDQIPEGSKLPLGILVDIYGRKMQADFEGVLERRIHDFINYGEGLWHTGQRNINWLRVSKDAVAKGFRFKNYGEILVAKMKEEFPAIVDRVQVTIFTDEAKVKEYMEVAREKYKERDDRMRGLTDETVDTFYSCVLCQSFAPNHVCIVTPERVGLCGAVSWLDAKASYEINHAGPNQPIPKEGEIDPIKGIWKSVNDYLYTASNRNLEQVCLYTLMENPMTSCGCFEAIMAILPECNGIMITTRDHAGMTPSGMTFSTLAGMIGGGTQTPGFMGIGRTYIVSKKFISADGGIARIVWMPKSLKDFLHDEVVRRSVEEGLGEDFIDKIADETIGTTVDEILPYLEEKGHPALTMDPIMRSHTSRG 736
                                   325       335       345       355       365       375       385       395       405       415       425       435       445       455       465       475       485       495       505       515       525       535       545       555       565       575       585       595       605       615       625       635       645       655       665       675       685       695       705       715       725       735 


Chain D from PDB  Type:PROTEIN  Length:422
 aligned with DCMA_MOOTH | P27988 from UniProtKB/Swiss-Prot  Length:729

    Alignment length:422
                                                                                                                                                                                                                                                                                                                                                                                                                                                       729        
                                   325       335       345       355       365       375       385       395       405       415       425       435       445       455       465       475       485       495       505       515       525       535       545       555       565       575       585       595       605       615       625       635       645       655       665       675       685       695       705       715       725   |     -  
           DCMA_MOOTH   316 IKLDLPINFGPAFEGESIRKGDMYVEMGGNRTPAFELVRTVSESEITDGKIEVIGPDIDQIPEGSKLPLGILVDIYGRKMQADFEGVLERRIHDFINYGEGLWHTGQRNINWLRVSKDAVAKGFRFKNYGEILVAKMKEEFPAIVDRVQVTIFTDEAKVKEYMEVAREKYKERDDRMRGLTDETVDTFYSCVLCQSFAPNHVCIVTPERVGLCGAVSWLDAKASYEINHAGPNQPIPKEGEIDPIKGIWKSVNDYLYTASNRNLEQVCLYTLMENPMTSCGCFEAIMAILPECNGIMITTRDHAGMTPSGMTFSTLAGMIGGGTQTPGFMGIGRTYIVSKKFISADGGIARIVWMPKSLKDFLHDEFVRRSVEEGLGEDFIDKIADETIGTTVDEILPYLEEKGHPALTMDPIM--------   -
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .........hhhhh....hhh.eeeeee.....eeeeeee.hhhhh....eeee..hhhhh...ee..eeeeeeee....hhhhhhhhhhhhhhhhhh...eeeeee..eeeeeeehhhhhhh..hhhhhhhhhhhhhhhh.....eeeeeee.hhhhhhhhhhhhhhhhhhhhhhh.........eeeee.hhhhh.....eee...........hhhhhhhhhhhh....eeeee...eee....eehhhhhhhhhhh........................eeeeeehhhheeeeee...........hhhhhhhhhh.......eeeehhhhhhh...hhhhhhhh.eee.hhhhhhhhhhhhhhhhhhh....hhhhhh.......hhhhhhhhhhhhhhhhhhh.hhhhhh..... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3git D 316 IKLDLPINFGPAFEGESIRKGDMYVEMGGNRTPAFELVRTVSESEITDGKIEVIGPDIDQIPEGSKLPLGILVDIYGRKMQADFEGVLERRIHDFINYGEGLWHTGQRNINWLRVSKDAVAKGFRFKNYGEILVAKMKEEFPAIVDRVQVTIFTDEAKVKEYMEVAREKYKERDDRMRGLTDETVDTFYSCVLCQSFAPNHVCIVTPERVGLCGAVSWLDAKASYEINHAGPNQPIPKEGEIDPIKGIWKSVNDYLYTASNRNLEQVCLYTLMENPMTSCGCFEAIMAILPECNGIMITTRDHAGMTPSGMTFSTLAGMIGGGTQTPGFMGIGRTYIVSKKFISADGGIARIVWMPKSLKDFLHDEVVRRSVEEGLGEDFIDKIADETIGTTVDEILPYLEEKGHPALTMDPIMRSHTSRGH 737
                                   325       335       345       355       365       375       385       395       405       415       425       435       445       455       465       475       485       495       505       515       525       535       545       555       565       575       585       595       605       615       625       635       645       655       665       675       685       695       705       715       725       735  


Chain E from PDB  Type:PROTEIN  Length:421
 aligned with DCMA_MOOTH | P27988 from UniProtKB/Swiss-Prot  Length:729

    Alignment length:421
                                                                                                                                                                                                                                                                                                                                                                                                                                                       729       
                                   325       335       345       355       365       375       385       395       405       415       425       435       445       455       465       475       485       495       505       515       525       535       545       555       565       575       585       595       605       615       625       635       645       655       665       675       685       695       705       715       725   |     - 
           DCMA_MOOTH   316 IKLDLPINFGPAFEGESIRKGDMYVEMGGNRTPAFELVRTVSESEITDGKIEVIGPDIDQIPEGSKLPLGILVDIYGRKMQADFEGVLERRIHDFINYGEGLWHTGQRNINWLRVSKDAVAKGFRFKNYGEILVAKMKEEFPAIVDRVQVTIFTDEAKVKEYMEVAREKYKERDDRMRGLTDETVDTFYSCVLCQSFAPNHVCIVTPERVGLCGAVSWLDAKASYEINHAGPNQPIPKEGEIDPIKGIWKSVNDYLYTASNRNLEQVCLYTLMENPMTSCGCFEAIMAILPECNGIMITTRDHAGMTPSGMTFSTLAGMIGGGTQTPGFMGIGRTYIVSKKFISADGGIARIVWMPKSLKDFLHDEFVRRSVEEGLGEDFIDKIADETIGTTVDEILPYLEEKGHPALTMDPIM-------   -
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .........hhhhh....hhh.eeeeee.....eeeeeee.hhhhh....eeee..hhhhh...ee..eeeeeeee....hhhhhhhhhhhhhhhhhh...eeeeee..eeeeeeehhhhhhh..hhhhhhhhhhhhhhhh.....eeeeeee.hhhhhhhhhhhhhhhhhhhhhhh.........eeeee.hhhhh.....eee...........hhhhhhhhhhhh....eeeee...eee....eehhhhhhhhhhh........................eeeeeehhhheeeeee...........hhhhhhhhhh.......eeeehhhhhhh...hhhhhhhh.eee.hhhhhhhhhhhhhhhhhhh....hhhhhh.......hhhhhhhhhhhhhhhhhhh.hhhhhh.... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3git E 316 IKLDLPINFGPAFEGESIRKGDMYVEMGGNRTPAFELVRTVSESEITDGKIEVIGPDIDQIPEGSKLPLGILVDIYGRKMQADFEGVLERRIHDFINYGEGLWHTGQRNINWLRVSKDAVAKGFRFKNYGEILVAKMKEEFPAIVDRVQVTIFTDEAKVKEYMEVAREKYKERDDRMRGLTDETVDTFYSCVLCQSFAPNHVCIVTPERVGLCGAVSWLDAKASYEINHAGPNQPIPKEGEIDPIKGIWKSVNDYLYTASNRNLEQVCLYTLMENPMTSCGCFEAIMAILPECNGIMITTRDHAGMTPSGMTFSTLAGMIGGGTQTPGFMGIGRTYIVSKKFISADGGIARIVWMPKSLKDFLHDEVVRRSVEEGLGEDFIDKIADETIGTTVDEILPYLEEKGHPALTMDPIMRSHTSRG 736
                                   325       335       345       355       365       375       385       395       405       415       425       435       445       455       465       475       485       495       505       515       525       535       545       555       565       575       585       595       605       615       625       635       645       655       665       675       685       695       705       715       725       735 


Chain F from PDB  Type:PROTEIN  Length:421
 aligned with DCMA_MOOTH | P27988 from UniProtKB/Swiss-Prot  Length:729

    Alignment length:421
                                                                                                                                                                                                                                                                                                                                                                                                                                                       729       
                                   325       335       345       355       365       375       385       395       405       415       425       435       445       455       465       475       485       495       505       515       525       535       545       555       565       575       585       595       605       615       625       635       645       655       665       675       685       695       705       715       725   |     - 
           DCMA_MOOTH   316 IKLDLPINFGPAFEGESIRKGDMYVEMGGNRTPAFELVRTVSESEITDGKIEVIGPDIDQIPEGSKLPLGILVDIYGRKMQADFEGVLERRIHDFINYGEGLWHTGQRNINWLRVSKDAVAKGFRFKNYGEILVAKMKEEFPAIVDRVQVTIFTDEAKVKEYMEVAREKYKERDDRMRGLTDETVDTFYSCVLCQSFAPNHVCIVTPERVGLCGAVSWLDAKASYEINHAGPNQPIPKEGEIDPIKGIWKSVNDYLYTASNRNLEQVCLYTLMENPMTSCGCFEAIMAILPECNGIMITTRDHAGMTPSGMTFSTLAGMIGGGTQTPGFMGIGRTYIVSKKFISADGGIARIVWMPKSLKDFLHDEFVRRSVEEGLGEDFIDKIADETIGTTVDEILPYLEEKGHPALTMDPIM-------   -
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .........hhhhh....hhh.eeeeee.....eeeeeee.hhhhh....eeee..hhhhh...ee..eeeeeeee....hhhhhhhhhhhhhhhhhh...eeeeee..eeeeeeehhhhhhh..hhhhhhhhhhhhhhhh.....eeeeeee.hhhhhhhhhhhhhhhhhhhhhhh...hhhhh.eeeee.hhhhh.....eee...........hhhhhhhhhhhh....eeeee...eee....eehhhhhhhhhhh........................eeeeeehhhheeeeee...........hhhhhhhhhh.......eeeehhhhhhh...hhhhhhhh.eee.hhhhhhhhhhhhhhhhhhh....hhhhhh.......hhhhhhhhhhhh.hhhhhh.hhhhhh.... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3git F 316 IKLDLPINFGPAFEGESIRKGDMYVEMGGNRTPAFELVRTVSESEITDGKIEVIGPDIDQIPEGSKLPLGILVDIYGRKMQADFEGVLERRIHDFINYGEGLWHTGQRNINWLRVSKDAVAKGFRFKNYGEILVAKMKEEFPAIVDRVQVTIFTDEAKVKEYMEVAREKYKERDDRMRGLTDETVDTFYSCVLCQSFAPNHVCIVTPERVGLCGAVSWLDAKASYEINHAGPNQPIPKEGEIDPIKGIWKSVNDYLYTASNRNLEQVCLYTLMENPMTSCGCFEAIMAILPECNGIMITTRDHAGMTPSGMTFSTLAGMIGGGTQTPGFMGIGRTYIVSKKFISADGGIARIVWMPKSLKDFLHDEVVRRSVEEGLGEDFIDKIADETIGTTVDEILPYLEEKGHPALTMDPIMRSHTSRG 736
                                   325       335       345       355       365       375       385       395       405       415       425       435       445       455       465       475       485       495       505       515       525       535       545       555       565       575       585       595       605       615       625       635       645       655       665       675       685       695       705       715       725       735
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 3GIT)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 3GIT)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 3GIT)

(-) Gene Ontology  (11, 11)

Asymmetric Unit(hide GO term definitions)
Chain A,B,C,D,E,F   (DCMA_MOOTH | P27988)
molecular function
    GO:0051539    4 iron, 4 sulfur cluster binding    Interacting selectively and non-covalently with a 4 iron, 4 sulfur (4Fe-4S) cluster; this cluster consists of four iron atoms, with the inorganic sulfur atoms found between the irons and acting as bridging ligands.
    GO:0043884    CO-methylating acetyl-CoA synthase activity    Catalysis of the reaction: acetyl-CoA + corrinoid protein = CO + methylcorrinoid protein + CoA.
    GO:0018492    carbon-monoxide dehydrogenase (acceptor) activity    Catalysis of the reaction: CO + H2O + acceptor = CO2 + reduced acceptor.
    GO:0003824    catalytic activity    Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
    GO:0051536    iron-sulfur cluster binding    Interacting selectively and non-covalently with an iron-sulfur cluster, a combination of iron and sulfur atoms.
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.
    GO:0016491    oxidoreductase activity    Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
    GO:0016740    transferase activity    Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2.
biological process
    GO:0006084    acetyl-CoA metabolic process    The chemical reactions and pathways involving acetyl-CoA, a derivative of coenzyme A in which the sulfhydryl group is acetylated; it is a metabolite derived from several pathways (e.g. glycolysis, fatty acid oxidation, amino-acid catabolism) and is further metabolized by the tricarboxylic acid cycle. It is a key intermediate in lipid and terpenoid biosynthesis.
    GO:0015977    carbon fixation    A metabolic process in which carbon (usually derived from carbon dioxide) is incorporated into organic compounds (usually carbohydrates).
    GO:0055114    oxidation-reduction process    A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        DCMA_MOOTH | P27988: 1mjg 1oao 2z8y 3i01 3i04 3s2x 5h6w

(-) Related Entries Specified in the PDB File

1oao CODH/HOLO-ACS COMPLEX