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3GIT
Biol. Unit 7
Info
Asym.Unit (410 KB)
Biol.Unit 1 (73 KB)
Biol.Unit 2 (72 KB)
Biol.Unit 3 (72 KB)
Biol.Unit 4 (73 KB)
Biol.Unit 5 (73 KB)
Biol.Unit 6 (72 KB)
Biol.Unit 7 (396 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF A TRUNCATED ACETYL-COA SYNTHASE
Authors
:
A. Volbeda, C. Darnault, J. C. Fontecilla-Camps
Date
:
06 Mar 09 (Deposition) - 06 Oct 09 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
3.00
Chains
:
Asym. Unit : A,B,C,D,E,F
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Biol. Unit 3: C (1x)
Biol. Unit 4: D (1x)
Biol. Unit 5: E (1x)
Biol. Unit 6: F (1x)
Biol. Unit 7: A,B,C,D,E,F (1x)
Keywords
:
Acetyltransferase, Carbon Dioxide Fixation, Iron, Iron-Sulfur, Metal- Binding, Nickel, Transferase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
A. Volbeda, C. Darnault, X. Tan, P. A. Lindahl, J. C. Fontecilla-Camps
Novel Domain Arrangement In The Crystal Structure Of A Truncated Acetyl-Coa Synthase From Moorella Thermoacetica
Biochemistry V. 48 7916 2009
[
close entry info
]
Hetero Components
(4, 42)
Info
All Hetero Components
1a: GLYCEROL (GOLa)
1b: GLYCEROL (GOLb)
1c: GLYCEROL (GOLc)
1d: GLYCEROL (GOLd)
1e: GLYCEROL (GOLe)
1f: GLYCEROL (GOLf)
2a: HYDROSULFURIC ACID (H2Sa)
2b: HYDROSULFURIC ACID (H2Sb)
2c: HYDROSULFURIC ACID (H2Sc)
2d: HYDROSULFURIC ACID (H2Sd)
2e: HYDROSULFURIC ACID (H2Se)
2f: HYDROSULFURIC ACID (H2Sf)
3a: IRON/SULFUR CLUSTER (SF4a)
3b: IRON/SULFUR CLUSTER (SF4b)
3c: IRON/SULFUR CLUSTER (SF4c)
3d: IRON/SULFUR CLUSTER (SF4d)
3e: IRON/SULFUR CLUSTER (SF4e)
3f: IRON/SULFUR CLUSTER (SF4f)
4a: SULFATE ION (SO4a)
4b: SULFATE ION (SO4b)
4c: SULFATE ION (SO4c)
4d: SULFATE ION (SO4d)
4e: SULFATE ION (SO4e)
4f: SULFATE ION (SO4f)
4g: SULFATE ION (SO4g)
4h: SULFATE ION (SO4h)
4i: SULFATE ION (SO4i)
4j: SULFATE ION (SO4j)
4k: SULFATE ION (SO4k)
4l: SULFATE ION (SO4l)
4m: SULFATE ION (SO4m)
4n: SULFATE ION (SO4n)
4o: SULFATE ION (SO4o)
4p: SULFATE ION (SO4p)
4q: SULFATE ION (SO4q)
4r: SULFATE ION (SO4r)
4s: SULFATE ION (SO4s)
4t: SULFATE ION (SO4t)
4u: SULFATE ION (SO4u)
4v: SULFATE ION (SO4v)
4w: SULFATE ION (SO4w)
4x: SULFATE ION (SO4x)
5a: ZINC ION (ZNa)
5b: ZINC ION (ZNb)
5c: ZINC ION (ZNc)
5d: ZINC ION (ZNd)
5e: ZINC ION (ZNe)
5f: ZINC ION (ZNf)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
GOL
6
Ligand/Ion
GLYCEROL
2
H2S
6
Ligand/Ion
HYDROSULFURIC ACID
3
SF4
6
Ligand/Ion
IRON/SULFUR CLUSTER
4
SO4
24
Ligand/Ion
SULFATE ION
5
ZN
-1
Ligand/Ion
ZINC ION
[
close Hetero Component info
]
Sites
(48, 48)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
18: BC9 (SOFTWARE)
19: CC1 (SOFTWARE)
20: CC2 (SOFTWARE)
21: CC3 (SOFTWARE)
22: CC4 (SOFTWARE)
23: CC5 (SOFTWARE)
24: CC6 (SOFTWARE)
25: CC7 (SOFTWARE)
26: CC8 (SOFTWARE)
27: CC9 (SOFTWARE)
28: DC1 (SOFTWARE)
29: DC2 (SOFTWARE)
30: DC3 (SOFTWARE)
31: DC4 (SOFTWARE)
32: DC5 (SOFTWARE)
33: DC6 (SOFTWARE)
34: DC7 (SOFTWARE)
35: DC8 (SOFTWARE)
36: DC9 (SOFTWARE)
37: EC1 (SOFTWARE)
38: EC2 (SOFTWARE)
39: EC3 (SOFTWARE)
40: EC4 (SOFTWARE)
41: EC5 (SOFTWARE)
42: EC6 (SOFTWARE)
43: EC7 (SOFTWARE)
44: EC8 (SOFTWARE)
45: EC9 (SOFTWARE)
46: FC1 (SOFTWARE)
47: FC2 (SOFTWARE)
48: FC3 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
ARG A:405 , CYS A:506 , CYS A:509 , CYS A:518 , LEU A:527 , CYS A:528 , VAL A:531 , ZN A:739
BINDING SITE FOR RESIDUE SF4 A 738
02
AC2
SOFTWARE
CYS A:509 , CYS A:595 , CYS A:597 , SF4 A:738 , H2S A:740
BINDING SITE FOR RESIDUE ZN A 739
03
AC3
SOFTWARE
CYS A:595 , GLY A:596 , CYS A:597 , ZN A:739
BINDING SITE FOR RESIDUE H2S A 740
04
AC4
SOFTWARE
PRO A:377 , GLU A:378 , LYS E:335 , LYS E:381
BINDING SITE FOR RESIDUE SO4 A 741
05
AC5
SOFTWARE
GLU A:554 , GLY A:555 , GLU A:556
BINDING SITE FOR RESIDUE SO4 A 742
06
AC6
SOFTWARE
ILE A:333 , TRP A:418 , SO4 A:744 , HOH A:759
BINDING SITE FOR RESIDUE GOL A 743
07
AC7
SOFTWARE
ARG A:334 , LYS A:335 , ARG A:429 , GOL A:743
BINDING SITE FOR RESIDUE SO4 A 744
08
AC8
SOFTWARE
ARG A:354 , TYR A:477
BINDING SITE FOR RESIDUE SO4 A 745
09
AC9
SOFTWARE
LYS A:335 , LYS A:381 , PRO F:377 , GLU F:378
BINDING SITE FOR RESIDUE SO4 A 746
10
BC1
SOFTWARE
ARG B:405 , CYS B:506 , CYS B:509 , CYS B:518 , LEU B:527 , CYS B:528 , ZN B:739
BINDING SITE FOR RESIDUE SF4 B 738
11
BC2
SOFTWARE
CYS B:509 , CYS B:595 , CYS B:597 , SF4 B:738 , H2S B:740
BINDING SITE FOR RESIDUE ZN B 739
12
BC3
SOFTWARE
CYS B:595 , GLY B:596 , CYS B:597 , ZN B:739
BINDING SITE FOR RESIDUE H2S B 740
13
BC4
SOFTWARE
GLU B:554 , GLY B:555 , GLU B:556
BINDING SITE FOR RESIDUE SO4 B 742
14
BC5
SOFTWARE
SER B:332 , ILE B:333 , TRP B:418 , TRP B:427 , HOH B:758 , HOH B:759
BINDING SITE FOR RESIDUE GOL B 743
15
BC6
SOFTWARE
ILE B:333 , ARG B:334 , LYS B:335 , ARG B:429 , HOH B:756
BINDING SITE FOR RESIDUE SO4 B 744
16
BC7
SOFTWARE
ARG B:354 , TYR B:477
BINDING SITE FOR RESIDUE SO4 B 745
17
BC8
SOFTWARE
LYS B:335 , LYS B:381 , PRO C:377 , GLU C:378
BINDING SITE FOR RESIDUE SO4 B 741
18
BC9
SOFTWARE
ARG C:405 , CYS C:506 , CYS C:509 , CYS C:518 , GLY C:526 , LEU C:527 , CYS C:528 , VAL C:531 , ZN C:739
BINDING SITE FOR RESIDUE SF4 C 738
19
CC1
SOFTWARE
CYS C:509 , CYS C:595 , CYS C:597 , SF4 C:738 , H2S C:740
BINDING SITE FOR RESIDUE ZN C 739
20
CC2
SOFTWARE
CYS C:509 , CYS C:595 , GLY C:596 , CYS C:597 , ZN C:739
BINDING SITE FOR RESIDUE H2S C 740
21
CC3
SOFTWARE
GLU C:554 , GLY C:555 , GLU C:556
BINDING SITE FOR RESIDUE SO4 C 742
22
CC4
SOFTWARE
SER C:332 , ILE C:333 , TRP C:418
BINDING SITE FOR RESIDUE GOL C 743
23
CC5
SOFTWARE
ARG C:334 , LYS C:335 , ARG C:429 , HOH C:756
BINDING SITE FOR RESIDUE SO4 C 744
24
CC6
SOFTWARE
ARG C:354 , TYR C:477
BINDING SITE FOR RESIDUE SO4 C 745
25
CC7
SOFTWARE
LYS C:335 , LYS C:381 , PRO D:377 , GLU D:378
BINDING SITE FOR RESIDUE SO4 C 741
26
CC8
SOFTWARE
PRO B:377 , GLU B:378 , LYS D:335 , LYS D:381
BINDING SITE FOR RESIDUE SO4 D 741
27
CC9
SOFTWARE
ARG D:405 , CYS D:506 , CYS D:509 , CYS D:518 , GLY D:526 , LEU D:527 , CYS D:528 , ZN D:739
BINDING SITE FOR RESIDUE SF4 D 738
28
DC1
SOFTWARE
CYS D:509 , CYS D:595 , CYS D:597 , SF4 D:738 , H2S D:740
BINDING SITE FOR RESIDUE ZN D 739
29
DC2
SOFTWARE
CYS D:509 , CYS D:595 , GLY D:596 , CYS D:597 , ZN D:739
BINDING SITE FOR RESIDUE H2S D 740
30
DC3
SOFTWARE
GLU D:554 , GLY D:555 , GLU D:556
BINDING SITE FOR RESIDUE SO4 D 742
31
DC4
SOFTWARE
SER D:332 , ILE D:333 , TRP D:418 , TRP D:427 , ARG D:429 , HOH D:758
BINDING SITE FOR RESIDUE GOL D 743
32
DC5
SOFTWARE
ILE D:333 , ARG D:334 , LYS D:335 , ARG D:429 , HOH D:756
BINDING SITE FOR RESIDUE SO4 D 744
33
DC6
SOFTWARE
ARG D:354 , TYR D:477
BINDING SITE FOR RESIDUE SO4 D 745
34
DC7
SOFTWARE
ARG E:405 , CYS E:506 , CYS E:509 , CYS E:518 , GLY E:526 , LEU E:527 , CYS E:528 , VAL E:531 , ZN E:739
BINDING SITE FOR RESIDUE SF4 E 738
35
DC8
SOFTWARE
CYS E:509 , CYS E:595 , CYS E:597 , SF4 E:738 , H2S E:740
BINDING SITE FOR RESIDUE ZN E 739
36
DC9
SOFTWARE
CYS E:509 , CYS E:595 , GLY E:596 , CYS E:597 , ZN E:739
BINDING SITE FOR RESIDUE H2S E 740
37
EC1
SOFTWARE
GLU E:554 , GLY E:555 , GLU E:556
BINDING SITE FOR RESIDUE SO4 E 742
38
EC2
SOFTWARE
SER E:332 , ILE E:333 , TRP E:418 , TRP E:427 , ARG E:429 , SO4 E:744 , HOH E:759
BINDING SITE FOR RESIDUE GOL E 743
39
EC3
SOFTWARE
ARG E:334 , LYS E:335 , ARG E:429 , GOL E:743
BINDING SITE FOR RESIDUE SO4 E 744
40
EC4
SOFTWARE
ARG E:354 , TYR E:477
BINDING SITE FOR RESIDUE SO4 E 745
41
EC5
SOFTWARE
PRO E:377 , GLU E:378 , LYS F:335 , LYS F:381
BINDING SITE FOR RESIDUE SO4 F 741
42
EC6
SOFTWARE
ARG F:405 , CYS F:506 , CYS F:509 , CYS F:518 , LEU F:527 , CYS F:528 , VAL F:531
BINDING SITE FOR RESIDUE SF4 F 738
43
EC7
SOFTWARE
CYS F:509 , CYS F:595 , CYS F:597 , H2S F:740
BINDING SITE FOR RESIDUE ZN F 739
44
EC8
SOFTWARE
CYS F:595 , GLY F:596 , CYS F:597 , ZN F:739
BINDING SITE FOR RESIDUE H2S F 740
45
EC9
SOFTWARE
GLU F:554 , GLY F:555 , GLU F:556
BINDING SITE FOR RESIDUE SO4 F 742
46
FC1
SOFTWARE
SER F:332 , ILE F:333 , TRP F:418 , TRP F:427 , ARG F:429 , SO4 F:744 , HOH F:759
BINDING SITE FOR RESIDUE GOL F 743
47
FC2
SOFTWARE
ARG F:334 , LYS F:335 , ARG F:429 , GOL F:743
BINDING SITE FOR RESIDUE SO4 F 744
48
FC3
SOFTWARE
ARG F:354 , TYR F:477
BINDING SITE FOR RESIDUE SO4 F 745
[
close Site info
]
SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are only available for the asymmetric unit)
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PROSITE Patterns/Profiles
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Sorry, no Info available
[
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]
Exons
(0, 0)
Info
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
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Sorry, no Info available
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CATH Domains
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Pfam Domains
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Sorry, no Info available
[
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)
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Asymmetric Unit 1
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Biol.Unit 3 (72 KB)
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