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(-) Description

Title :  STRUCTURE OF THE MARASMIUS OREADES MUSHROOM LECTIN (MOA) IN COMPLEX WITH GALALPHA(1,3)[FUCALPHA(1,2)]GAL AND CALCIUM.
 
Authors :  E. M. Grahn, I. J. Goldstein, U. Krengel
Date :  08 Sep 08  (Deposition) - 30 Jun 09  (Release) - 30 Jun 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.80
Chains :  Asym. Unit :  A,B,C,D
Biol. Unit 1:  A,B  (1x)
Biol. Unit 2:  C,D  (1x)
Keywords :  Lectin, Beta-Trefoil, Calcium-Binding, Carbohydrate-Binding, Sugar-Binding, Sugar Binding Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  E. M. Grahn, H. C. Winter, H. Tateno, I. J. Goldstein, U. Krengel
Structural Characterization Of A Lectin From The Mushroom Marasmius Oreades In Complex With The Blood Group B Trisaccharide And Calcium.
J. Mol. Biol. V. 390 457 2009
PubMed-ID: 19426740  |  Reference-DOI: 10.1016/J.JMB.2009.04.074
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - AGGLUTININ
    Chains: A, B, C, D
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Organism Scientific: MARASMIUS OREADES
    Organism Taxid: 181124
    Synonym: LECTIN

 Structural Features

(-) Chains, Units

  1234
Asymmetric Unit : ABCD
Biological Unit 1 (1x): AB  
Biological Unit 2 (1x):   CD

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (6, 60)

Asymmetric Unit (6, 60)
No.NameCountTypeFull Name
1ACT4Ligand/IonACETATE ION
2CA16Ligand/IonCALCIUM ION
3FUC12Ligand/IonALPHA-L-FUCOSE
4GAL8Ligand/IonBETA-D-GALACTOSE
5GLA16Ligand/IonALPHA D-GALACTOSE
6OCS4Mod. Amino AcidCYSTEINESULFONIC ACID
Biological Unit 1 (5, 22)
No.NameCountTypeFull Name
1ACT2Ligand/IonACETATE ION
2CA-1Ligand/IonCALCIUM ION
3FUC6Ligand/IonALPHA-L-FUCOSE
4GAL4Ligand/IonBETA-D-GALACTOSE
5GLA8Ligand/IonALPHA D-GALACTOSE
6OCS2Mod. Amino AcidCYSTEINESULFONIC ACID
Biological Unit 2 (5, 22)
No.NameCountTypeFull Name
1ACT2Ligand/IonACETATE ION
2CA-1Ligand/IonCALCIUM ION
3FUC6Ligand/IonALPHA-L-FUCOSE
4GAL4Ligand/IonBETA-D-GALACTOSE
5GLA8Ligand/IonALPHA D-GALACTOSE
6OCS2Mod. Amino AcidCYSTEINESULFONIC ACID

(-) Sites  (56, 56)

Asymmetric Unit (56, 56)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREASP A:23 , GAL A:295 , HOH A:321 , HOH A:355 , HOH A:390 , HOH A:502BINDING SITE FOR RESIDUE FUC A 294
02AC2SOFTWAREASP A:20 , LEU A:21 , LYS A:22 , ASP A:23 , TRP A:35 , HIS A:45 , FUC A:294 , GLA A:296 , HOH A:321 , HOH A:334BINDING SITE FOR RESIDUE GAL A 295
03AC3SOFTWARELYS A:22 , TRP A:35 , GLN A:36 , PHE A:37 , THR A:38 , ASN A:43 , GAL A:295 , HOH A:312 , HOH A:313 , HOH A:334 , HOH A:355 , HOH A:457BINDING SITE FOR RESIDUE GLA A 296
04AC4SOFTWAREGAL A:298 , GLA A:299 , HOH A:443 , HOH A:542BINDING SITE FOR RESIDUE FUC A 297
05AC5SOFTWAREASP A:72 , LEU A:73 , TYR A:74 , ASN A:75 , TRP A:87 , ASN A:95 , HIS A:97 , FUC A:297 , GLA A:299BINDING SITE FOR RESIDUE GAL A 298
06AC6SOFTWARETRP A:87 , GLN A:88 , ASN A:95 , FUC A:297 , GAL A:298 , HOH A:361 , HOH A:488 , HOH A:492 , HOH A:511 , HOH A:541 , HOH A:543BINDING SITE FOR RESIDUE GLA A 299
07AC7SOFTWAREGLA A:301 , HOH A:410 , HOH A:474 , HOH A:501 , HOH A:525 , HOH B:648BINDING SITE FOR RESIDUE FUC A 300
08AC8SOFTWAREASP A:123 , LEU A:124 , VAL A:125 , ASN A:126 , TRP A:138 , ASN A:146 , HIS A:148 , FUC A:300 , GLA A:302 , HOH A:332BINDING SITE FOR RESIDUE GLA A 301
09AC9SOFTWARETRP A:138 , THR A:139 , GLU A:144 , ASN A:146 , GLA A:301 , HOH A:332 , HOH A:337 , HOH A:410 , HOH A:459 , HOH A:478 , HOH A:507 , ALA B:80BINDING SITE FOR RESIDUE GLA A 302
10BC1SOFTWAREGLN A:211 , ASP A:214 , ASP A:216 , ASP A:217 , HOH A:323 , ASP B:183BINDING SITE FOR RESIDUE CA A 303
11BC2SOFTWAREASP A:214 , ASP A:216 , HOH A:539 , LEU B:182 , ASP B:183 , HOH B:651BINDING SITE FOR RESIDUE CA A 304
12BC3SOFTWARELEU A:182 , ASP A:183 , HOH A:426 , ASP B:214 , ASP B:216 , HOH B:722BINDING SITE FOR RESIDUE CA A 305
13BC4SOFTWAREASP A:216 , HIS A:257 , ALA A:258 , TYR A:289 , HOH A:539 , ILE B:181BINDING SITE FOR RESIDUE ACT A 306
14BC5SOFTWARESER A:201BINDING SITE FOR RESIDUE CA A 307
15BC6SOFTWAREVAL A:15BINDING SITE FOR RESIDUE CA A 308
16BC7SOFTWAREILE A:181 , HOH A:637 , ASP B:216 , HIS B:257 , ALA B:258 , TYR B:289 , HOH B:722BINDING SITE FOR RESIDUE ACT A 309
17BC8SOFTWAREASP B:23 , GAL B:295 , HOH B:530 , HOH B:549 , HOH B:574 , HOH B:673BINDING SITE FOR RESIDUE FUC B 294
18BC9SOFTWAREASP B:20 , LEU B:21 , LYS B:22 , ASP B:23 , TRP B:35 , HIS B:45 , FUC B:294 , GLA B:296 , HOH B:528 , HOH B:530BINDING SITE FOR RESIDUE GAL B 295
19CC1SOFTWARELYS B:22 , TRP B:35 , GLN B:36 , PHE B:37 , THR B:38 , ASN B:43 , GAL B:295 , HOH B:506 , HOH B:511 , HOH B:528 , HOH B:549 , HOH B:616BINDING SITE FOR RESIDUE GLA B 296
20CC2SOFTWAREGAL B:298 , GLA B:299 , HOH B:636 , HOH B:707BINDING SITE FOR RESIDUE FUC B 297
21CC3SOFTWAREASP B:72 , LEU B:73 , TYR B:74 , ASN B:75 , TRP B:87 , ASN B:95 , HIS B:97 , FUC B:297 , GLA B:299 , HOH B:739BINDING SITE FOR RESIDUE GAL B 298
22CC4SOFTWARETRP B:87 , GLN B:88 , ASN B:95 , FUC B:297 , GAL B:298 , HOH B:519 , HOH B:663 , HOH B:679 , HOH B:697 , HOH B:732 , HOH B:774BINDING SITE FOR RESIDUE GLA B 299
23CC5SOFTWAREHOH A:453 , GLA B:301 , HOH B:591 , HOH B:625 , HOH B:649 , HOH B:729BINDING SITE FOR RESIDUE FUC B 300
24CC6SOFTWAREASP B:123 , LEU B:124 , VAL B:125 , ASN B:126 , TRP B:138 , ASN B:146 , HIS B:148 , FUC B:300 , GLA B:302 , HOH B:529 , HOH B:798 , HOH B:799BINDING SITE FOR RESIDUE GLA B 301
25CC7SOFTWAREGLU A:79 , ALA A:80 , HOH A:337 , TRP B:138 , THR B:139 , GLU B:144 , ASN B:146 , GLA B:301 , HOH B:529 , HOH B:726 , HOH B:727 , HOH B:728BINDING SITE FOR RESIDUE GLA B 302
26CC8SOFTWAREASP A:183 , GLN B:211 , ASP B:214 , ASP B:216 , ASP B:217 , HOH B:525BINDING SITE FOR RESIDUE CA B 303
27CC9SOFTWARESER B:201BINDING SITE FOR RESIDUE CA B 305
28DC1SOFTWAREVAL B:15 , PRO B:16BINDING SITE FOR RESIDUE CA B 306
29DC2SOFTWAREASP C:23 , GAL C:295 , HOH C:587 , HOH C:635 , HOH C:651 , HOH C:772BINDING SITE FOR RESIDUE FUC C 294
30DC3SOFTWAREASP C:20 , LEU C:21 , LYS C:22 , ASP C:23 , TRP C:35 , HIS C:45 , FUC C:294 , GLA C:296 , HOH C:587 , HOH C:601BINDING SITE FOR RESIDUE GAL C 295
31DC4SOFTWARELYS C:22 , TRP C:35 , GLN C:36 , PHE C:37 , THR C:38 , ASN C:43 , GAL C:295 , HOH C:579 , HOH C:584 , HOH C:601 , HOH C:635 , HOH C:693BINDING SITE FOR RESIDUE GLA C 296
32DC5SOFTWAREGAL C:298 , GLA C:299 , HOH C:680 , HOH C:785BINDING SITE FOR RESIDUE FUC C 297
33DC6SOFTWAREASP C:72 , LEU C:73 , TYR C:74 , ASN C:75 , TRP C:87 , ASN C:95 , HIS C:97 , FUC C:297 , GLA C:299 , HOH C:875BINDING SITE FOR RESIDUE GAL C 298
34DC7SOFTWARETRP C:87 , GLN C:88 , ASN C:95 , FUC C:297 , GAL C:298 , HOH C:588 , HOH C:728 , HOH C:746 , HOH C:786 , HOH C:804 , HOH C:861BINDING SITE FOR RESIDUE GLA C 299
35DC8SOFTWAREGLA C:301 , HOH C:677 , HOH C:735 , HOH C:779 , HOH C:836 , HOH D:472 , HOH D:568BINDING SITE FOR RESIDUE FUC C 300
36DC9SOFTWAREASP C:123 , LEU C:124 , VAL C:125 , ASN C:126 , TRP C:138 , ASN C:146 , HIS C:148 , FUC C:300 , GLA C:302 , HOH C:607 , HOH C:871BINDING SITE FOR RESIDUE GLA C 301
37EC1SOFTWARETRP C:138 , THR C:139 , GLU C:144 , ASN C:146 , GLA C:301 , HOH C:607 , HOH C:805 , HOH C:839 , ALA D:80 , HOH D:330 , HOH D:546BINDING SITE FOR RESIDUE GLA C 302
38EC2SOFTWAREASP C:214 , ASP C:216 , HOH C:794 , HOH C:889 , LEU D:182 , ASP D:183BINDING SITE FOR RESIDUE CA C 303
39EC3SOFTWAREGLN C:211 , ASP C:214 , ASP C:216 , ASP C:217 , HOH C:600 , ASP D:183BINDING SITE FOR RESIDUE CA C 304
40EC4SOFTWARELEU C:182 , ASP C:183 , HOH C:733 , ASP D:214 , ASP D:216 , HOH D:530BINDING SITE FOR RESIDUE CA C 305
41EC5SOFTWAREASP C:216 , HIS C:257 , ALA C:258 , TYR C:289 , HOH C:794 , ILE D:181BINDING SITE FOR RESIDUE ACT C 306
42EC6SOFTWARESER C:201BINDING SITE FOR RESIDUE CA C 307
43EC7SOFTWAREVAL C:15BINDING SITE FOR RESIDUE CA C 308
44EC8SOFTWAREASP D:23 , GAL D:295 , HOH D:315 , HOH D:366 , HOH D:377 , HOH D:466BINDING SITE FOR RESIDUE FUC D 294
45EC9SOFTWAREASP D:20 , LEU D:21 , LYS D:22 , ASP D:23 , TRP D:35 , HIS D:45 , FUC D:294 , GLA D:296 , HOH D:315 , HOH D:333BINDING SITE FOR RESIDUE GAL D 295
46FC1SOFTWARELYS D:22 , TRP D:35 , GLN D:36 , PHE D:37 , THR D:38 , ASN D:43 , GAL D:295 , HOH D:308 , HOH D:314 , HOH D:333 , HOH D:366 , HOH D:422BINDING SITE FOR RESIDUE GLA D 296
47FC2SOFTWAREGAL D:298 , GLA D:299 , HOH D:431 , HOH D:548BINDING SITE FOR RESIDUE FUC D 297
48FC3SOFTWAREASP D:72 , LEU D:73 , TYR D:74 , ASN D:75 , TRP D:87 , ASN D:95 , HIS D:97 , FUC D:297 , GLA D:299 , HOH D:549BINDING SITE FOR RESIDUE GAL D 298
49FC4SOFTWARETRP D:87 , GLN D:88 , ASN D:95 , FUC D:297 , GAL D:298 , HOH D:349 , HOH D:428 , HOH D:471 , HOH D:488 , HOH D:495 , HOH D:532BINDING SITE FOR RESIDUE GLA D 299
50FC5SOFTWAREHOH C:719 , GLA D:301 , HOH D:394 , HOH D:413 , HOH D:475 , HOH D:504 , HOH D:569BINDING SITE FOR RESIDUE FUC D 300
51FC6SOFTWAREASP D:123 , LEU D:124 , VAL D:125 , ASN D:126 , TRP D:138 , ASN D:146 , HIS D:148 , FUC D:300 , GLA D:302 , HOH D:332 , HOH D:606BINDING SITE FOR RESIDUE GLA D 301
52FC7SOFTWAREALA C:80 , TRP D:138 , THR D:139 , GLU D:144 , ASN D:146 , GLA D:301 , HOH D:330 , HOH D:332 , HOH D:541 , HOH D:542 , HOH D:547BINDING SITE FOR RESIDUE GLA D 302
53FC8SOFTWAREASP C:183 , GLN D:211 , ASP D:214 , ASP D:216 , ASP D:217 , HOH D:337BINDING SITE FOR RESIDUE CA D 303
54FC9SOFTWAREASP D:216 , HIS D:257 , ALA D:258 , HOH D:530 , HOH D:607BINDING SITE FOR RESIDUE ACT D 304
55GC1SOFTWARESER D:201BINDING SITE FOR RESIDUE CA D 305
56GC2SOFTWAREVAL D:15 , PRO D:16BINDING SITE FOR RESIDUE CA D 306

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 3EF2)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 3EF2)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 3EF2)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 3EF2)

(-) Exons   (0, 0)

(no "Exon" information available for 3EF2)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:292
 aligned with Q8X123_9AGAR | Q8X123 from UniProtKB/TrEMBL  Length:293

    Alignment length:292
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291  
         Q8X123_9AGAR     2 SLRRGIYHIENAGVPSAIDLKDGSSSDGTPIVGWQFTPDTINWHQLWLAEPIPNVADTFTLCNLFSGTYMDLYNGSSEAGTAVNGWQGTAFTTNPHQLWTIKKSSDGTSYKIQNYGSKTFVDLVNGDSSDGAKIAGWTGTWDEGNPHQKWYFNRMSVSSAEAQAAIARNPHIHGTYRGYILDGEYLVLPNATFTQIWKDSGLPGSKWREQIYDCDDFAIAMKAAVGKWGADSWKANGFAIFCGVMLGVNKAGDAAHAYNFTLTKDHADIVFFEPQNGGYLNDIGYDSYMAFY 293
               SCOP domains d3ef2a1 A:2-155 Agglutinin MOA, N-terminal domain                                                                                                         d3ef2a2 A:156-293 Agglutinin MOA                                                                                                           SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....eeeeeee.....eeee.hhh....eeeeee...........eeeeee......eeeeee.....eeee.hhh....eeeeee.......hhhh.eeeee......eeeee.....eeee.hhh....eeeeee.......hhhh.eeeee.eeehhhhhhhhhh...eeeeeeee....eee..hhhhhhhhhhh.............hhhhhhhhhhhhhhhhhhhhh.....ee..eeeeee......eeeeeeee......eeee......ee.....eeeeee. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3ef2 A   2 SLRRGIYHIENAGVPSAIDLKDGSSSDGTPIVGWQFTPDTINWHQLWLAEPIPNVADTFTLCNLFSGTYMDLYNGSSEAGTAVNGWQGTAFTTNPHQLWTIKKSSDGTSYKIQNYGSKTFVDLVNGDSSDGAKIAGWTGTWDEGNPHQKWYFNRMSVSSAEAQAAIARNPHIHGTYRGYILDGEYLVLPNATFTQIWKDSGLPGSKWREQIYDcDDFAIAMKAAVGKWGADSWKANGFAIFCGVMLGVNKAGDAAHAYNFTLTKDHADIVFFEPQNGGYLNDIGYDSYMAFY 293
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211   |   221       231       241       251       261       271       281       291  
                                                                                                                                                                                                                                               215-OCS                                                                          


Chain B from PDB  Type:PROTEIN  Length:292
 aligned with Q8X123_9AGAR | Q8X123 from UniProtKB/TrEMBL  Length:293

    Alignment length:292
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291  
         Q8X123_9AGAR     2 SLRRGIYHIENAGVPSAIDLKDGSSSDGTPIVGWQFTPDTINWHQLWLAEPIPNVADTFTLCNLFSGTYMDLYNGSSEAGTAVNGWQGTAFTTNPHQLWTIKKSSDGTSYKIQNYGSKTFVDLVNGDSSDGAKIAGWTGTWDEGNPHQKWYFNRMSVSSAEAQAAIARNPHIHGTYRGYILDGEYLVLPNATFTQIWKDSGLPGSKWREQIYDCDDFAIAMKAAVGKWGADSWKANGFAIFCGVMLGVNKAGDAAHAYNFTLTKDHADIVFFEPQNGGYLNDIGYDSYMAFY 293
               SCOP domains d3ef2b1 B:2-155 Agglutinin MOA, N-terminal domain                                                                                                         d3ef2b2 B:156-293 Agglutinin MOA                                                                                                           SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....eeeeeee.....eeee.hhh....eeeeee...........eeeeee......eeeeee.....eeee.hhh....eeeeee.......hhhh.eeeee......eeeee.....eeee.hhh....eeeeee.......hhhh.eeeee.eeehhhhhhhhhh...eeeeeeee....eee..hhhhhhhhhhhh............hhhhhhhhhhhhhhhhhhhhh.....ee..eeeeee......eeeeeeee......eeee......ee.....eeeeee. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3ef2 B   2 SLRRGIYHIENAGVPSAIDLKDGSSSDGTPIVGWQFTPDTINWHQLWLAEPIPNVADTFTLCNLFSGTYMDLYNGSSEAGTAVNGWQGTAFTTNPHQLWTIKKSSDGTSYKIQNYGSKTFVDLVNGDSSDGAKIAGWTGTWDEGNPHQKWYFNRMSVSSAEAQAAIARNPHIHGTYRGYILDGEYLVLPNATFTQIWKDSGLPGSKWREQIYDcDDFAIAMKAAVGKWGADSWKANGFAIFCGVMLGVNKAGDAAHAYNFTLTKDHADIVFFEPQNGGYLNDIGYDSYMAFY 293
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211   |   221       231       241       251       261       271       281       291  
                                                                                                                                                                                                                                               215-OCS                                                                          


Chain C from PDB  Type:PROTEIN  Length:292
 aligned with Q8X123_9AGAR | Q8X123 from UniProtKB/TrEMBL  Length:293

    Alignment length:292
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291  
         Q8X123_9AGAR     2 SLRRGIYHIENAGVPSAIDLKDGSSSDGTPIVGWQFTPDTINWHQLWLAEPIPNVADTFTLCNLFSGTYMDLYNGSSEAGTAVNGWQGTAFTTNPHQLWTIKKSSDGTSYKIQNYGSKTFVDLVNGDSSDGAKIAGWTGTWDEGNPHQKWYFNRMSVSSAEAQAAIARNPHIHGTYRGYILDGEYLVLPNATFTQIWKDSGLPGSKWREQIYDCDDFAIAMKAAVGKWGADSWKANGFAIFCGVMLGVNKAGDAAHAYNFTLTKDHADIVFFEPQNGGYLNDIGYDSYMAFY 293
               SCOP domains d3ef2c1 C:2-155 Agglutinin MOA, N-terminal domain                                                                                                         d3ef2c2 C:156-293 Agglutinin MOA                                                                                                           SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....eeeeeee.....eeee.hhh....eeeeee...........eeeeee......eeeeee.....eeee.hhh....eeeeee.......hhhh.eeeee......eeeee.....eeee.hhh....eeeeee.......hhhh.eeeee.eeehhhhhhhhhh...eeeeeeee....eee..hhhhhhhhhhhh............hhhhhhhhhhhhhhhhhhhhh.....ee..eeeeee......eeeeeeee......eeee......ee.....eeeeee. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3ef2 C   2 SLRRGIYHIENAGVPSAIDLKDGSSSDGTPIVGWQFTPDTINWHQLWLAEPIPNVADTFTLCNLFSGTYMDLYNGSSEAGTAVNGWQGTAFTTNPHQLWTIKKSSDGTSYKIQNYGSKTFVDLVNGDSSDGAKIAGWTGTWDEGNPHQKWYFNRMSVSSAEAQAAIARNPHIHGTYRGYILDGEYLVLPNATFTQIWKDSGLPGSKWREQIYDcDDFAIAMKAAVGKWGADSWKANGFAIFCGVMLGVNKAGDAAHAYNFTLTKDHADIVFFEPQNGGYLNDIGYDSYMAFY 293
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211   |   221       231       241       251       261       271       281       291  
                                                                                                                                                                                                                                               215-OCS                                                                          


Chain D from PDB  Type:PROTEIN  Length:292
 aligned with Q8X123_9AGAR | Q8X123 from UniProtKB/TrEMBL  Length:293

    Alignment length:292
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291  
         Q8X123_9AGAR     2 SLRRGIYHIENAGVPSAIDLKDGSSSDGTPIVGWQFTPDTINWHQLWLAEPIPNVADTFTLCNLFSGTYMDLYNGSSEAGTAVNGWQGTAFTTNPHQLWTIKKSSDGTSYKIQNYGSKTFVDLVNGDSSDGAKIAGWTGTWDEGNPHQKWYFNRMSVSSAEAQAAIARNPHIHGTYRGYILDGEYLVLPNATFTQIWKDSGLPGSKWREQIYDCDDFAIAMKAAVGKWGADSWKANGFAIFCGVMLGVNKAGDAAHAYNFTLTKDHADIVFFEPQNGGYLNDIGYDSYMAFY 293
               SCOP domains d3ef2d1 D:2-155 Agglutinin MOA, N-terminal domain                                                                                                         d3ef2d2 D:156-293 Agglutinin MOA                                                                                                           SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....eeeeeee.....eeee.hhh....eeeeee...........eeeeee......eeeeee.....eeee.hhh....eeeeee.......hhhh.eeeee......eeeee.....eeee.hhh....eeeeee.......hhhh.eeeee.eeehhhhhhhhhh...eeeeeeee....eee..hhhhhhhhhhhh............hhhhhhhhhhhhhhhhhhhhh.....ee..eeeeee......eeeeeeee......eeee......ee.....eeeeee. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3ef2 D   2 SLRRGIYHIENAGVPSAIDLKDGSSSDGTPIVGWQFTPDTINWHQLWLAEPIPNVADTFTLCNLFSGTYMDLYNGSSEAGTAVNGWQGTAFTTNPHQLWTIKKSSDGTSYKIQNYGSKTFVDLVNGDSSDGAKIAGWTGTWDEGNPHQKWYFNRMSVSSAEAQAAIARNPHIHGTYRGYILDGEYLVLPNATFTQIWKDSGLPGSKWREQIYDcDDFAIAMKAAVGKWGADSWKANGFAIFCGVMLGVNKAGDAAHAYNFTLTKDHADIVFFEPQNGGYLNDIGYDSYMAFY 293
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211   |   221       231       241       251       261       271       281       291  
                                                                                                                                                                                                                                               215-OCS
   Legend:   → Mismatch (orange background)
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 Classification and Annotation

(-) SCOP Domains  (2, 8)

Asymmetric Unit
(-)
Class: All beta proteins (24004)
(-)
Class: Alpha and beta proteins (a+b) (23004)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 3EF2)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 3EF2)

(-) Gene Ontology  (1, 1)

Asymmetric Unit(hide GO term definitions)
Chain A,B,C,D   (Q8X123_9AGAR | Q8X123)
molecular function
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.

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 Databases and Analysis Tools

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  3ef2
    Family and Domain Information: ProDom | SYSTERS
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  Q8X123_9AGAR | Q8X123
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  Q8X123_9AGAR | Q8X123
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        Q8X123_9AGAR | Q8X123: 5mu9
UniProtKB/TrEMBL
        Q8X123_9AGAR | Q8X123: 2iho 5d61 5d62 5d63

(-) Related Entries Specified in the PDB File

(no "Related Entries Specified in the PDB File" available for 3EF2)