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(-) Description

Title :  CRYSTAL STRUCTURE OF A PUTATIVE BRANCHED-CHAIN AMINO ACID AMINOTRANSFERASE (TM0831) FROM THERMOTOGA MARITIMA AT 2.15 A RESOLUTION
 
Authors :  Joint Center For Structural Genomics (Jcsg)
Date :  10 Apr 08  (Deposition) - 22 Apr 08  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.15
Chains :  Asym. Unit :  A,B,C,D
Biol. Unit 1:  A,B  (2x)
Biol. Unit 2:  C,D  (2x)
Keywords :  Tm0831, Putative Branched-Chain Amino Acid Aminotransferase, Structural Genomics, Joint Center For Structural Genomics, Jcsg, Protein Structure Initiative, Psi-2, Amino-Acid Biosynthesis, Branched-Chain Amino Acid Biosynthesis, Pyridoxal Phosphate, Transferase (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  Joint Center For Structural Genomics (Jcsg)
Crystal Structure Of A Putative Branched-Chain Amino Acid Aminotransferase (Tm0831) From Thermotoga Maritima At 2. 15 Resolution
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - PUTATIVE BRANCHED-CHAIN-AMINO-ACID AMINOTRANSFERASE
    Atcc43589
    ChainsA, B, C, D
    EC Number2.6.1.42
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System PlasmidMH1
    Expression System StrainDL41
    Expression System Taxid562
    Expression System Vector TypePLASMID
    GeneTM0831, ILVE
    Organism ScientificTHERMOTOGA MARITIMA MSB8
    Organism Taxid243274
    StrainMSB8 / DSM 3109 / JCM 10099
    SynonymBCAT

 Structural Features

(-) Chains, Units

  1234
Asymmetric Unit ABCD
Biological Unit 1 (2x)AB  
Biological Unit 2 (2x)  CD

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (6, 28)

Asymmetric Unit (6, 28)
No.NameCountTypeFull Name
1CIT3Ligand/IonCITRIC ACID
2CL4Ligand/IonCHLORIDE ION
3MPD7Ligand/Ion(4S)-2-METHYL-2,4-PENTANEDIOL
4MSE8Mod. Amino AcidSELENOMETHIONINE
5PLP2Ligand/IonPYRIDOXAL-5'-PHOSPHATE
6UNL4Ligand/IonUNKNOWN LIGAND
Biological Unit 1 (5, 26)
No.NameCountTypeFull Name
1CIT4Ligand/IonCITRIC ACID
2CL-1Ligand/IonCHLORIDE ION
3MPD8Ligand/Ion(4S)-2-METHYL-2,4-PENTANEDIOL
4MSE8Mod. Amino AcidSELENOMETHIONINE
5PLP2Ligand/IonPYRIDOXAL-5'-PHOSPHATE
6UNL4Ligand/IonUNKNOWN LIGAND
Biological Unit 2 (5, 22)
No.NameCountTypeFull Name
1CIT2Ligand/IonCITRIC ACID
2CL-1Ligand/IonCHLORIDE ION
3MPD6Ligand/Ion(4S)-2-METHYL-2,4-PENTANEDIOL
4MSE8Mod. Amino AcidSELENOMETHIONINE
5PLP2Ligand/IonPYRIDOXAL-5'-PHOSPHATE
6UNL4Ligand/IonUNKNOWN LIGAND

(-) Sites  (15, 15)

Asymmetric Unit (15, 15)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREARG A:50 , LYS A:133 , ILE A:140 , ARG A:144 , GLU A:164 , GLY A:165 , SER A:166 , PHE A:167 , SER A:168 , ASN A:169 , LEU A:188 , GLY A:190 , ILE A:191 , THR A:192 , THR A:228BINDING SITE FOR RESIDUE PLP A 300
02AC2SOFTWAREARG C:50 , LYS C:133 , GLU C:164 , SER C:166 , PHE C:167 , SER C:168 , ASN C:169 , LEU C:188 , GLY C:190 , ILE C:191 , THR C:192 , THR C:228BINDING SITE FOR RESIDUE PLP C 300
03AC3SOFTWAREARG B:85 , HIS B:227 , THR B:228 , SER B:229BINDING SITE FOR RESIDUE UNL B 276
04AC4SOFTWARETHR C:33 , HIS C:227 , THR C:228 , SER C:229BINDING SITE FOR RESIDUE UNL C 301
05AC5SOFTWARETHR A:33 , HIS A:227 , THR A:228 , SER A:229BINDING SITE FOR RESIDUE UNL A 301
06AC6SOFTWARETHR D:33 , ARG D:85 , HIS D:227 , THR D:228 , SER D:229BINDING SITE FOR RESIDUE UNL D 275
07AC7SOFTWARELEU A:142 , ARG A:145 , GLU A:146 , PHE B:57 , PHE B:58 , ASP C:67 , LYS C:71BINDING SITE FOR RESIDUE CIT A 302
08AC8SOFTWAREARG D:122 , PRO D:124 , ASP D:125 , LEU D:126 , ASN D:159BINDING SITE FOR RESIDUE CIT D 276
09AC9SOFTWAREARG B:122 , PRO B:124 , ASP B:125 , LEU B:126 , LEU B:158 , ASN B:159BINDING SITE FOR RESIDUE CIT B 277
10BC1SOFTWAREASN A:159 , ASP A:184 , SER A:185BINDING SITE FOR RESIDUE MPD A 303
11BC2SOFTWAREASP A:125 , PRO A:129 , ASN B:119BINDING SITE FOR RESIDUE MPD A 304
12BC3SOFTWAREASP C:184BINDING SITE FOR RESIDUE MPD C 303
13BC4SOFTWARELYS B:52 , ASP B:56 , ASN B:59 , LEU B:60 , PHE C:66BINDING SITE FOR RESIDUE MPD B 278
14BC5SOFTWAREASP B:125 , LEU B:126 , SER B:127 , THR B:128 , PRO B:129BINDING SITE FOR RESIDUE MPD B 279
15BC6SOFTWAREASN C:119 , PHE D:57 , LEU D:126 , SER D:127 , THR D:128 , PRO D:129BINDING SITE FOR RESIDUE MPD D 277

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 3CSW)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 3CSW)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 3CSW)

(-) PROSITE Motifs  (1, 4)

Asymmetric Unit (1, 4)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1AA_TRANSFER_CLASS_4PS00770 Aminotransferases class-IV signature.ILVE_THEMA164-193
 
 
 
  4A:164-193
B:164-193
C:164-193
D:164-193
Biological Unit 1 (1, 4)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1AA_TRANSFER_CLASS_4PS00770 Aminotransferases class-IV signature.ILVE_THEMA164-193
 
 
 
  4A:164-193
B:164-193
-
-
Biological Unit 2 (1, 4)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1AA_TRANSFER_CLASS_4PS00770 Aminotransferases class-IV signature.ILVE_THEMA164-193
 
 
 
  4-
-
C:164-193
D:164-193

(-) Exons   (0, 0)

(no "Exon" information available for 3CSW)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain A from PDB  Type:PROTEIN  Length:274
 aligned with ILVE_THEMA | P74921 from UniProtKB/Swiss-Prot  Length:273

    Alignment length:274
                             1                                                                                                                                                                                                                                                                                
                             |       9        19        29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269    
           ILVE_THEMA     - -MLIWWRGKFRRADEISLDFSLFEKSLQGAVYETLRTYSRAPFAAYKHYTRLKRSADFFNLPLSLSFDEFTKVLKAGADEFKQEVRIKVYLFPDSGEVLFVFSPLNIPDLETGVEVKISNVRRIPDLSTPPALKITGRTDIVLARREIVDCYDVILLGLNGQVCEGSFSNVFLVKEGKLITPSLDSGILDGITRENVIKLAKSLEIPVEERVVWVWELFEADEMFLTHTSAGVVPVRRLNEHSFFEEEPGPVTATLMENFEPFVLNLEENWVGI 273
               SCOP domains d3cswa_ A: automated matches                                                                                                                                                                                                                                                       SCOP domains
               CATH domains 3cswA01 A:0-104  [code=3.30.470.10, no name defined]                                                     3cswA02 A:105-273 D-amino Acid Aminotransferase, subunit A, domain 2                                                                                                      CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeee..eeee..eeeeehhhhhhhh...eeeeeeee..ee.hhhhhhhhhhhhhhh.......hhhhhhhhhhhhhh.....eeeeeee......eeeeeee.........eeeee...................hhhhhhhhh......eeeee.....eeee...eeeeee..eeeee.hhhh...hhhhhhhhhhhhhh...eeee..hhhhhhh..eeeeee...eeeeeeee..ee......hhhhhhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------AA_TRANSFER_CLASS_4           -------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3csw A   0 HVLIWWRGKFRRADEISLDFSLFEKSLQGAVYETLRTYSRAPFAAYKHYTRLKRSADFFNLPLSLSFDEFTKVLKAGADEFKQEVRIKVYLFPDSGEVLFVFSPLNIPDLETGVEVKISNVRRIPDLSTPPALKITGRTDIVLARREIVDCYDVILLGLNGQVCEGSFSNVFLVKEGKLITPSLDSGILDGITRENVIKLAKSLEIPVEERVVWVWELFEADEmFLTHTSAGVVPVRRLNEHSFFEEEPGPVTATLmENFEPFVLNLEENWVGI 273
                                     9        19        29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219   |   229       239       249      |259       269    
                                                                                                                                                                                                                                                         223-MSE                          256-MSE             

Chain B from PDB  Type:PROTEIN  Length:274
 aligned with ILVE_THEMA | P74921 from UniProtKB/Swiss-Prot  Length:273

    Alignment length:274
                             1                                                                                                                                                                                                                                                                                
                             |       9        19        29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269    
           ILVE_THEMA     - -MLIWWRGKFRRADEISLDFSLFEKSLQGAVYETLRTYSRAPFAAYKHYTRLKRSADFFNLPLSLSFDEFTKVLKAGADEFKQEVRIKVYLFPDSGEVLFVFSPLNIPDLETGVEVKISNVRRIPDLSTPPALKITGRTDIVLARREIVDCYDVILLGLNGQVCEGSFSNVFLVKEGKLITPSLDSGILDGITRENVIKLAKSLEIPVEERVVWVWELFEADEMFLTHTSAGVVPVRRLNEHSFFEEEPGPVTATLMENFEPFVLNLEENWVGI 273
               SCOP domains d3cswb_ B: automated matches                                                                                                                                                                                                                                                       SCOP domains
               CATH domains 3cswB01 B:0-104  [code=3.30.470.10, no name defined]                                                     3cswB02 B:105-273 D-amino Acid Aminotransferase, subunit A, domain 2                                                                                                      CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeee..eeee..eeeeehhhhhhhh...eeeeeeee..ee.hhhhhhhhhhhhhhhh......hhhhhhhhhhhhhh.....eeeeeee......eeeeeee.........eeeee...................hhhhhhhhh......eeeee.....eeee...eeeeee..eeeee.hhhh...hhhhhhhhhhhhhh...eeee..hhhhhhhh.eeeeee...eeeeeeee..ee......hhhhhhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------AA_TRANSFER_CLASS_4           -------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3csw B   0 HVLIWWRGKFRRADEISLDFSLFEKSLQGAVYETLRTYSRAPFAAYKHYTRLKRSADFFNLPLSLSFDEFTKVLKAGADEFKQEVRIKVYLFPDSGEVLFVFSPLNIPDLETGVEVKISNVRRIPDLSTPPALKITGRTDIVLARREIVDCYDVILLGLNGQVCEGSFSNVFLVKEGKLITPSLDSGILDGITRENVIKLAKSLEIPVEERVVWVWELFEADEmFLTHTSAGVVPVRRLNEHSFFEEEPGPVTATLmENFEPFVLNLEENWVGI 273
                                     9        19        29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219   |   229       239       249      |259       269    
                                                                                                                                                                                                                                                         223-MSE                          256-MSE             

Chain C from PDB  Type:PROTEIN  Length:275
 aligned with ILVE_THEMA | P74921 from UniProtKB/Swiss-Prot  Length:273

    Alignment length:275
                              1                                                                                                                                                                                                                                                                                
                              |      8        18        28        38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268     
           ILVE_THEMA     - --MLIWWRGKFRRADEISLDFSLFEKSLQGAVYETLRTYSRAPFAAYKHYTRLKRSADFFNLPLSLSFDEFTKVLKAGADEFKQEVRIKVYLFPDSGEVLFVFSPLNIPDLETGVEVKISNVRRIPDLSTPPALKITGRTDIVLARREIVDCYDVILLGLNGQVCEGSFSNVFLVKEGKLITPSLDSGILDGITRENVIKLAKSLEIPVEERVVWVWELFEADEMFLTHTSAGVVPVRRLNEHSFFEEEPGPVTATLMENFEPFVLNLEENWVGI 273
               SCOP domains d3cswc_ C: automated matches                                                                                                                                                                                                                                                        SCOP domains
               CATH domains 3cswC01 C:-1-104  [code=3.30.470.10, no name defined]                                                     3cswC02 C:105-273 D-amino Acid Aminotransferase, subunit A, domain 2                                                                                                      CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeee..eeee...eeeehhhhhhhhhh.eeeeeeee..ee.hhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhh....eeeeeee......eeeeeee.........eeeee...................hhhhhhhhh......eeeee.....eeee...eeeeee..eeeee.hhhh...hhhhhhhhhhhhhh...eeee..hhhhhhh..eeeeee...eeeeeeee..ee......hhhhhhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------AA_TRANSFER_CLASS_4           -------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3csw C  -1 HHVLIWWRGKFRRADEISLDFSLFEKSLQGAVYETLRTYSRAPFAAYKHYTRLKRSADFFNLPLSLSFDEFTKVLKAGADEFKQEVRIKVYLFPDSGEVLFVFSPLNIPDLETGVEVKISNVRRIPDLSTPPALKITGRTDIVLARREIVDCYDVILLGLNGQVCEGSFSNVFLVKEGKLITPSLDSGILDGITRENVIKLAKSLEIPVEERVVWVWELFEADEmFLTHTSAGVVPVRRLNEHSFFEEEPGPVTATLmENFEPFVLNLEENWVGI 273
                                     8        18        28        38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218    |  228       238       248       258       268     
                                                                                                                                                                                                                                                          223-MSE                          256-MSE             

Chain D from PDB  Type:PROTEIN  Length:274
 aligned with ILVE_THEMA | P74921 from UniProtKB/Swiss-Prot  Length:273

    Alignment length:274
                             1                                                                                                                                                                                                                                                                                
                             |       9        19        29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269    
           ILVE_THEMA     - -MLIWWRGKFRRADEISLDFSLFEKSLQGAVYETLRTYSRAPFAAYKHYTRLKRSADFFNLPLSLSFDEFTKVLKAGADEFKQEVRIKVYLFPDSGEVLFVFSPLNIPDLETGVEVKISNVRRIPDLSTPPALKITGRTDIVLARREIVDCYDVILLGLNGQVCEGSFSNVFLVKEGKLITPSLDSGILDGITRENVIKLAKSLEIPVEERVVWVWELFEADEMFLTHTSAGVVPVRRLNEHSFFEEEPGPVTATLMENFEPFVLNLEENWVGI 273
               SCOP domains d3cswd_ D: automated matches                                                                                                                                                                                                                                                       SCOP domains
               CATH domains 3cswD01 D:0-104  [code=3.30.470.10, no name defined]                                                     3cswD02 D:105-273 D-amino Acid Aminotransferase, subunit A, domain 2                                                                                                      CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeee..eeee..eeeehhhhhhhhh...eeeeeeee..ee.hhhhhhhhhhhhhhhh......hhhhhhhhhhhhhh.....eeeeeee......eeeeeee.........eeeee...................hhhhhhhhhh.....eeeee.....eeee...eeeeee..eeeee.hhhh...hhhhhhhhhhhhhh...eeee..hhhhhhhh.eeeeee...eeeeeeee..ee......hhhhhhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------AA_TRANSFER_CLASS_4           -------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3csw D   0 HVLIWWRGKFRRADEISLDFSLFEKSLQGAVYETLRTYSRAPFAAYKHYTRLKRSADFFNLPLSLSFDEFTKVLKAGADEFKQEVRIKVYLFPDSGEVLFVFSPLNIPDLETGVEVKISNVRRIPDLSTPPALKITGRTDIVLARREIVDCYDVILLGLNGQVCEGSFSNVFLVKEGKLITPSLDSGILDGITRENVIKLAKSLEIPVEERVVWVWELFEADEmFLTHTSAGVVPVRRLNEHSFFEEEPGPVTATLmENFEPFVLNLEENWVGI 273
                                     9        19        29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219   |   229       239       249      |259       269    
                                                                                                                                                                                                                                                         223-MSE                          256-MSE             

   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 4)

Asymmetric Unit

(-) CATH Domains  (2, 8)

Asymmetric Unit
(-)
Class: Alpha Beta (26913)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 3CSW)

(-) Gene Ontology  (13, 13)

Asymmetric Unit(hide GO term definitions)
Chain A,B,C,D   (ILVE_THEMA | P74921)
molecular function
    GO:0052656    L-isoleucine transaminase activity    Catalysis of the reaction: 2-oxoglutarate + L-isoleucine = (S)-3-methyl-2-oxopentanoic acid + L-glutamic acid.
    GO:0052654    L-leucine transaminase activity    Catalysis of the reaction: 2-oxoglutarate + L-leucine = 4-methyl-2-oxopentanoate + L-glutamatic acid.
    GO:0052655    L-valine transaminase activity    Catalysis of the reaction: 2-oxoglutarate + L-valine = 3-methyl-2-oxobutanoic acid + L-glutamatic acid.
    GO:0004084    branched-chain-amino-acid transaminase activity    Catalysis of the reaction: a branched-chain amino acid + 2-oxoglutarate = L-glutamate + a 2-oxocarboxylate derived from the branched-chain amino acid.
    GO:0003824    catalytic activity    Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
    GO:0008483    transaminase activity    Catalysis of the transfer of an amino group to an acceptor, usually a 2-oxo acid.
    GO:0016740    transferase activity    Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2.
biological process
    GO:0009082    branched-chain amino acid biosynthetic process    The chemical reactions and pathways resulting in the formation of amino acids containing a branched carbon skeleton, comprising isoleucine, leucine and valine.
    GO:0008652    cellular amino acid biosynthetic process    The chemical reactions and pathways resulting in the formation of amino acids, organic acids containing one or more amino substituents.
    GO:0009097    isoleucine biosynthetic process    The chemical reactions and pathways resulting in the formation of isoleucine, (2R*,3R*)-2-amino-3-methylpentanoic acid.
    GO:0009098    leucine biosynthetic process    The chemical reactions and pathways resulting in the formation of leucine, 2-amino-4-methylpentanoic acid.
    GO:0008152    metabolic process    The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
    GO:0009099    valine biosynthetic process    The chemical reactions and pathways resulting in the formation of valine, 2-amino-3-methylbutanoic acid.

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