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(-) Description

Title :  CRYSTAL STRUCTURE OF METHYLOSINUS TRICHOSPORIUM OB3B PARTICULATE METHANE MONOOXYGENASE (PMMO)
 
Authors :  A. S. Hakemian
Date :  10 Mar 08  (Deposition) - 15 Jul 08  (Release) - 24 Sep 14  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  3.90
Chains :  Asym./Biol. Unit :  A,B,C,D,E,F,G,H,I,J,K,L,M,N,O
Keywords :  Membrane Protein, Methane, Beta Barrel (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  A. S. Hakemian, K. C. Kondapalli, J. Telser, B. M. Hoffman, T. L. Stemmler, A. C. Rosenzweig
The Metal Centers Of Particulate Methane Monooxygenase From Methylosinus Trichosporium Ob3B.
Biochemistry V. 47 6793 2008
PubMed-ID: 18540635  |  Reference-DOI: 10.1021/BI800598H

(-) Compounds

Molecule 1 - PMOB
    Chains: A, E, I
    Engineered: YES
    Gene: PMOB
    Organism Scientific: METHYLOSINUS TRICHOSPORIUM
 
Molecule 2 - PMOA
    Chains: B, F, J
    Engineered: YES
    Gene: PMOA
    Organism Scientific: METHYLOSINUS TRICHOSPORIUM
 
Molecule 3 - PMOC
    Chains: C, G, K
    Engineered: YES
    Gene: PMOC
    Organism Scientific: METHYLOSINUS TRICHOSPORIUM
 
Molecule 4 - 20-RESIDUE PEPTIDE
    Chains: D, H, L
    Engineered: YES
    Organism Scientific: METHYLOSINUS TRICHOSPORIUM
 
Molecule 5 - 26-RESIDUE PEPTIDE
    Chains: M, N, O
    Engineered: YES
    Organism Scientific: METHYLOSINUS TRICHOSPORIUM

 Structural Features

(-) Chains, Units

  123456789101112131415
Asymmetric/Biological Unit : ABCDEFGHIJKLMNO

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 147)

Asymmetric/Biological Unit (2, 147)
No.NameCountTypeFull Name
1CU9Ligand/IonCOPPER (II) ION
2UNK138Mod. Amino Acid

(-) Sites  (9, 9)

Asymmetric Unit (9, 9)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREASP C:129 , HIS C:133 , HIS C:146BINDING SITE FOR RESIDUE CU C 661
2AC2SOFTWAREHIS A:40 , HIS A:144 , HIS A:146BINDING SITE FOR RESIDUE CU A 711
3AC3SOFTWAREHIS A:40 , GLU A:42 , HIS A:146BINDING SITE FOR RESIDUE CU A 712
4AC4SOFTWAREASP G:129 , HIS G:133 , HIS G:146BINDING SITE FOR RESIDUE CU G 662
5AC5SOFTWAREHIS E:40 , HIS E:144 , HIS E:146BINDING SITE FOR RESIDUE CU E 721
6AC6SOFTWAREHIS E:40 , GLU E:42 , HIS E:146BINDING SITE FOR RESIDUE CU E 722
7AC7SOFTWAREASP K:129 , HIS K:133 , HIS K:146BINDING SITE FOR RESIDUE CU K 663
8AC8SOFTWAREHIS I:40 , HIS I:144 , HIS I:146BINDING SITE FOR RESIDUE CU I 731
9AC9SOFTWAREHIS I:40 , GLU I:42 , HIS I:146BINDING SITE FOR RESIDUE CU I 732

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 3CHX)

(-) Cis Peptide Bonds  (9, 9)

Asymmetric/Biological Unit
No.Residues
1Val A:306 -Pro A:307
2Met B:198 -Pro B:199
3Val B:218 -Pro B:219
4Val E:306 -Pro E:307
5Met F:198 -Pro F:199
6Val F:218 -Pro F:219
7Val I:306 -Pro I:307
8Met J:198 -Pro J:199
9Val J:218 -Pro J:219

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 3CHX)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 3CHX)

(-) Exons   (0, 0)

(no "Exon" information available for 3CHX)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:362
 aligned with Q9KX50_METTR | Q9KX50 from UniProtKB/TrEMBL  Length:431

    Alignment length:387
                                    49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319       329       339       349       359       369       379       389       399       409       419       
         Q9KX50_METTR    40 HGEKSQQAFLRMRTLNWYDVKWSKTSLNVNESMVLSGKVHVFSAWPQAVANPKSSFLNAGEPGPVLVRTAQFIGEQFAPRSVSLEVGKDYAFSIDLKARRAGRWHVHAQINVEGGGPIIGPGQWIEIKGDMADFKDPVTLLDGTTVDLETYGIDRIYAWHFPWMIAAAAWILYWFFKKGIIASYLRISEGKDEEQIGDDDRRVGAIVLAVTILATIIGYAVTNSTFPRTIPLQAGLQKPLTPIIEEGTAGVGPHVVTAELKGGVYKVPGRELTIQVKVTNKTDEPLKLGEYTAAGLRFLNPDVFTTKPEFPDYLLADRGLSTDPTPLAPGETKTIEVKVQDARWDIERLSDLAYDTDSQIGGLLMFFSPSGKRYATEIGGPVIPKFV 426
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 3chxA01 A:40-174,A:272-283 Particulate methane monooxygenase, b subunit. Chain: A, domain 1                                            3chxA02 A:175-271 Helix hairpin bin                                                              3chxA01                3chxA03 A:295-426 Parti          culate methane mono    oxygenase, b subunit. Chain: A, domain 3                                     CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......hhhhhh...eeeeeee...........eeeeeee...............eeee..........eeee...............eeeeeee.......ee..eeeeee...eeeeeee..ee..........eee.....eee.hhhhhhhhhh.........................hhhhhh.........hhhhhhhhhhhhhhhhhhhhhhhh......................-----------.......eee.....eeee....----------...................----.........................eeee.hhhhhh.hhhhhh........eeee.......eeee.....ee... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3chx A  40 HGEKSQQAFLRMRTLNWYDVKWSKTSLNVNESMVLSGKVHVFSAWPQAVANPKSSFLNAGEPGPVLVRTAQFIGEQFAPRSVSLEVGKDYAFSIDLKARRAGRWHVHAQINVEGGGPIIGPGQWIEIKGDMADFKDPVTLLDGTTVDLETYGIDRIYAWHFPWMIAAAAWILYWFFKKGIIASYLRISEGKDEEQIGDDDRRVGAIVLAVTILATIIGYAVTNSTFPRTIPLQAGLQKPLTPII-----------VTAELKGGVYKVPGRELTIQVKV----------GEYTAAGLRFLNPDVFTTK----DYLLADRGLSTDPTPLAPGETKTIEVKVQDARWDIERLSDLAYDTDSQIGGLLMFFSPSGKRYATEIGGPVIPKFV 426
                                    49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279   |     -     | 299       309       | -       329       339      |  - |     359       369       379       389       399       409       419       
                                                                                                                                                                                                                                                                             283         295                   317        328               346  351                                                                           


Chain B from PDB  Type:PROTEIN  Length:238
 aligned with Q50541_METTR | Q50541 from UniProtKB/TrEMBL  Length:252

    Alignment length:238
                                    21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241        
         Q50541_METTR    12 PFHSVAEAAGCVKTTDWMFLTLLFLAVLGGYHIHFMLTAGDWDFWVDWKDRRMWPTVVPILGVTFAAAAQAFFWENFKLPFGATFAVSGLLIGEWINRYCNFWGWTYFPISLVFPSALVVPALWLDIIMLLSGSYVITAVVGSLGWGLLFYPNNWPAIAALHQATEQHGQLMSLADLVGFHFVRTSMPEYIRMVERGTLRTFGKEVVPVAAFFSGFVSMMVYFLWWFVGKWYSTTKVI 249
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 3chxB00 B:12-249 particulate methane monooxygenase, chain B                                                                                                                                                                                    CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhh...hhhhhhhhhh....hhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhh............hhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhh...eee....eeehhhhhhhh......................................hhhhhhh............ Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3chx B  12 PFHSVAEAAGCVKTTDWMFLTLLFLAVLGGYHIHFMLTAGDWDFWVDWKDRRMWPTVVPILGVTFAAAAQAFFWENFKLPFGATFAVSGLLIGEWINRYCNFWGWTYFPISLVFPSALVVPALWLDIIMLLSGSYVITAVVGSLGWGLLFYPNNWPAIAALHQATEQHGQLMSLADLVGFHFVRTSMPEYIRMVERGTLRTFGKEVVPVAAFFSGFVSMMVYFLWWFVGKWYSTTKVI 249
                                    21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241        


Chain C from PDB  Type:PROTEIN  Length:159
 aligned with Q9KX51_METTR | Q9KX51 from UniProtKB/TrEMBL  Length:256

    Alignment length:159
                                    27        37        47        57        67        77        87        97       107       117       127       137       147       157       167         
         Q9KX51_METTR    18 IVDLRGMWVGVAGLNIFYLIVRIYEQIYGWRAGLDSFAPEFQTYWLSILWTEIPLELVSGLALAGWLWKTRDRNVDAVAPREELRRHVVLVEWLVVYAVAIYWGASFFTEQDGTWHMTVIRDTDFTPSHIIEFYMSYPIYSIMAVGAFFYAKTRIPYFA 176
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 3chxC00 C:18-176 Particulate methane monooxygenase subunit c2. Chain: C                                                                                         CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....hhhhhhhhhhhhhhhhhhhh.hhhhh...................hhhhhhhhhhhhhhhhhhhh........hhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhh........hhhhhh...hhhhhhhhhhhhhhhhhhh...... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3chx C  18 IVDLRGMWVGVAGLNIFYLIVRIYEQIYGWRAGLDSFAPEFQTYWLSILWTEIPLELVSGLALAGWLWKTRDRNVDAVAPREELRRHVVLVEWLVVYAVAIYWGASFFTEQDGTWHMTVIRDTDFTPSHIIEFYMSYPIYSIMAVGAFFYAKTRIPYFA 176
                                    27        37        47        57        67        77        87        97       107       117       127       137       147       157       167         


Chain D from PDB  Type:PROTEIN  Length:20
                                                    
               SCOP domains -------------------- SCOP domains
               CATH domains -------------------- CATH domains
               Pfam domains -------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) -------------------- SAPs(SNPs)
                    PROSITE -------------------- PROSITE
                 Transcript -------------------- Transcript
                 3chx D 501 xxxxxxxxxxxxxxxxxxxx 520
                            |||||||510|||||||520
                          501-UNK||510-UNK||519-UNK
                           502-UNK||511-UNK||520-UNK
                            503-UNK||512-UNK||  
                             504-UNK| 513-UNK|  
                              505-UNK  514-UNK  
                               506-UNK  515-UNK 
                                507-UNK  516-UNK
                                 508-UNK  517-UNK
                                  509-UNK  518-UNK


Chain E from PDB  Type:PROTEIN  Length:362
 aligned with Q9KX50_METTR | Q9KX50 from UniProtKB/TrEMBL  Length:431

    Alignment length:387
                                    49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319       329       339       349       359       369       379       389       399       409       419       
         Q9KX50_METTR    40 HGEKSQQAFLRMRTLNWYDVKWSKTSLNVNESMVLSGKVHVFSAWPQAVANPKSSFLNAGEPGPVLVRTAQFIGEQFAPRSVSLEVGKDYAFSIDLKARRAGRWHVHAQINVEGGGPIIGPGQWIEIKGDMADFKDPVTLLDGTTVDLETYGIDRIYAWHFPWMIAAAAWILYWFFKKGIIASYLRISEGKDEEQIGDDDRRVGAIVLAVTILATIIGYAVTNSTFPRTIPLQAGLQKPLTPIIEEGTAGVGPHVVTAELKGGVYKVPGRELTIQVKVTNKTDEPLKLGEYTAAGLRFLNPDVFTTKPEFPDYLLADRGLSTDPTPLAPGETKTIEVKVQDARWDIERLSDLAYDTDSQIGGLLMFFSPSGKRYATEIGGPVIPKFV 426
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 3chxE01 E:40-174,E:272-283 Particulate methane monooxygenase, b subunit. Chain: A, domain 1                                            3chxE02 E:175-271 Helix hairpin bin                                                              3chxE01                3chxE03 E:295-426 Parti          culate methane mono    oxygenase, b subunit. Chain: A, domain 3                                     CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......hhhhhh...eeeeeee...........eeeeeee...............eeee..........eeee...............eeeeeee.......ee..eeeeee...eeeeeee..ee..........eee.....eee.hhhhhhhhhh.........................hhhhhh.........hhhhhhhhhhhhhhhhhhhhhhhh......................-----------.......eee.....eeee....----------........ee.........----...ee....................eeee.hhhhhh.hhhhhh........eeee.......eeee.....ee... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3chx E  40 HGEKSQQAFLRMRTLNWYDVKWSKTSLNVNESMVLSGKVHVFSAWPQAVANPKSSFLNAGEPGPVLVRTAQFIGEQFAPRSVSLEVGKDYAFSIDLKARRAGRWHVHAQINVEGGGPIIGPGQWIEIKGDMADFKDPVTLLDGTTVDLETYGIDRIYAWHFPWMIAAAAWILYWFFKKGIIASYLRISEGKDEEQIGDDDRRVGAIVLAVTILATIIGYAVTNSTFPRTIPLQAGLQKPLTPII-----------VTAELKGGVYKVPGRELTIQVKV----------GEYTAAGLRFLNPDVFTTK----DYLLADRGLSTDPTPLAPGETKTIEVKVQDARWDIERLSDLAYDTDSQIGGLLMFFSPSGKRYATEIGGPVIPKFV 426
                                    49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279   |     -     | 299       309       | -       329       339      |  - |     359       369       379       389       399       409       419       
                                                                                                                                                                                                                                                                             283         295                   317        328               346  351                                                                           


Chain F from PDB  Type:PROTEIN  Length:238
 aligned with Q50541_METTR | Q50541 from UniProtKB/TrEMBL  Length:252

    Alignment length:238
                                    21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241        
         Q50541_METTR    12 PFHSVAEAAGCVKTTDWMFLTLLFLAVLGGYHIHFMLTAGDWDFWVDWKDRRMWPTVVPILGVTFAAAAQAFFWENFKLPFGATFAVSGLLIGEWINRYCNFWGWTYFPISLVFPSALVVPALWLDIIMLLSGSYVITAVVGSLGWGLLFYPNNWPAIAALHQATEQHGQLMSLADLVGFHFVRTSMPEYIRMVERGTLRTFGKEVVPVAAFFSGFVSMMVYFLWWFVGKWYSTTKVI 249
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 3chxF00 F:12-249 particulate methane monooxygenase, chain B                                                                                                                                                                                    CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhh...hhhhhhhhhh....hhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhh............hhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhh...eee....eeehhhhhhhh......................................hhhhhhh............ Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3chx F  12 PFHSVAEAAGCVKTTDWMFLTLLFLAVLGGYHIHFMLTAGDWDFWVDWKDRRMWPTVVPILGVTFAAAAQAFFWENFKLPFGATFAVSGLLIGEWINRYCNFWGWTYFPISLVFPSALVVPALWLDIIMLLSGSYVITAVVGSLGWGLLFYPNNWPAIAALHQATEQHGQLMSLADLVGFHFVRTSMPEYIRMVERGTLRTFGKEVVPVAAFFSGFVSMMVYFLWWFVGKWYSTTKVI 249
                                    21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241        


Chain G from PDB  Type:PROTEIN  Length:159
 aligned with Q9KX51_METTR | Q9KX51 from UniProtKB/TrEMBL  Length:256

    Alignment length:159
                                    27        37        47        57        67        77        87        97       107       117       127       137       147       157       167         
         Q9KX51_METTR    18 IVDLRGMWVGVAGLNIFYLIVRIYEQIYGWRAGLDSFAPEFQTYWLSILWTEIPLELVSGLALAGWLWKTRDRNVDAVAPREELRRHVVLVEWLVVYAVAIYWGASFFTEQDGTWHMTVIRDTDFTPSHIIEFYMSYPIYSIMAVGAFFYAKTRIPYFA 176
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 3chxG00 G:18-176 Particulate methane monooxygenase subunit c2. Chain: C                                                                                         CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....hhhhhhhhhhhhhhhhhhhh.hhhhh...................hhhhhhhhhhhhhhhhhhhh........hhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhh........hhhhhh...hhhhhhhhhhhhhhhhhhh...... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3chx G  18 IVDLRGMWVGVAGLNIFYLIVRIYEQIYGWRAGLDSFAPEFQTYWLSILWTEIPLELVSGLALAGWLWKTRDRNVDAVAPREELRRHVVLVEWLVVYAVAIYWGASFFTEQDGTWHMTVIRDTDFTPSHIIEFYMSYPIYSIMAVGAFFYAKTRIPYFA 176
                                    27        37        47        57        67        77        87        97       107       117       127       137       147       157       167         


Chain H from PDB  Type:PROTEIN  Length:20
                                                    
               SCOP domains -------------------- SCOP domains
               CATH domains -------------------- CATH domains
               Pfam domains -------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) -------------------- SAPs(SNPs)
                    PROSITE -------------------- PROSITE
                 Transcript -------------------- Transcript
                 3chx H 501 xxxxxxxxxxxxxxxxxxxx 520
                            |||||||510|||||||520
                            ||||||509-UNK||518-UNK
                          501-UNK||510-UNK||519-UNK
                           502-UNK||511-UNK||520-UNK
                            503-UNK| 512-UNK|   
                             504-UNK  513-UNK   
                              505-UNK  514-UNK  
                               506-UNK  515-UNK 
                                507-UNK  516-UNK
                                 508-UNK  517-UNK


Chain I from PDB  Type:PROTEIN  Length:362
 aligned with Q9KX50_METTR | Q9KX50 from UniProtKB/TrEMBL  Length:431

    Alignment length:387
                                    49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319       329       339       349       359       369       379       389       399       409       419       
         Q9KX50_METTR    40 HGEKSQQAFLRMRTLNWYDVKWSKTSLNVNESMVLSGKVHVFSAWPQAVANPKSSFLNAGEPGPVLVRTAQFIGEQFAPRSVSLEVGKDYAFSIDLKARRAGRWHVHAQINVEGGGPIIGPGQWIEIKGDMADFKDPVTLLDGTTVDLETYGIDRIYAWHFPWMIAAAAWILYWFFKKGIIASYLRISEGKDEEQIGDDDRRVGAIVLAVTILATIIGYAVTNSTFPRTIPLQAGLQKPLTPIIEEGTAGVGPHVVTAELKGGVYKVPGRELTIQVKVTNKTDEPLKLGEYTAAGLRFLNPDVFTTKPEFPDYLLADRGLSTDPTPLAPGETKTIEVKVQDARWDIERLSDLAYDTDSQIGGLLMFFSPSGKRYATEIGGPVIPKFV 426
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 3chxI01 I:40-174,I:272-283 Particulate methane monooxygenase, b subunit. Chain: A, domain 1                                            3chxI02 I:175-271 Helix hairpin bin                                                              3chxI01                3chxI03 I:295-426 Parti          culate methane mono    oxygenase, b subunit. Chain: A, domain 3                                     CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......hhhhhh...eeeeeee...........eeeeeee...............eeee..........eeee...............eeeeeee.......ee..eeeeee...eeeeeee..ee..........eee.....eee.hhhhhhhhhh.........................hhhhhh.........hhhhhhhhhhhhhhhhhhhhhhhh......................-----------.......eee.....eeee....----------........ee.........----...ee....................eeee.hhhhhh.hhhhhh........eeee.......eeee.....ee... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3chx I  40 HGEKSQQAFLRMRTLNWYDVKWSKTSLNVNESMVLSGKVHVFSAWPQAVANPKSSFLNAGEPGPVLVRTAQFIGEQFAPRSVSLEVGKDYAFSIDLKARRAGRWHVHAQINVEGGGPIIGPGQWIEIKGDMADFKDPVTLLDGTTVDLETYGIDRIYAWHFPWMIAAAAWILYWFFKKGIIASYLRISEGKDEEQIGDDDRRVGAIVLAVTILATIIGYAVTNSTFPRTIPLQAGLQKPLTPII-----------VTAELKGGVYKVPGRELTIQVKV----------GEYTAAGLRFLNPDVFTTK----DYLLADRGLSTDPTPLAPGETKTIEVKVQDARWDIERLSDLAYDTDSQIGGLLMFFSPSGKRYATEIGGPVIPKFV 426
                                    49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279   |     -     | 299       309       | -       329       339      |  - |     359       369       379       389       399       409       419       
                                                                                                                                                                                                                                                                             283         295                   317        328               346  351                                                                           


Chain J from PDB  Type:PROTEIN  Length:238
 aligned with Q50541_METTR | Q50541 from UniProtKB/TrEMBL  Length:252

    Alignment length:238
                                    21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241        
         Q50541_METTR    12 PFHSVAEAAGCVKTTDWMFLTLLFLAVLGGYHIHFMLTAGDWDFWVDWKDRRMWPTVVPILGVTFAAAAQAFFWENFKLPFGATFAVSGLLIGEWINRYCNFWGWTYFPISLVFPSALVVPALWLDIIMLLSGSYVITAVVGSLGWGLLFYPNNWPAIAALHQATEQHGQLMSLADLVGFHFVRTSMPEYIRMVERGTLRTFGKEVVPVAAFFSGFVSMMVYFLWWFVGKWYSTTKVI 249
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 3chxJ00 J:12-249 particulate methane monooxygenase, chain B                                                                                                                                                                                    CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhh...hhhhhhhhhh....hhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhh............hhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhh...eee....eeehhhhhhhh......................................hhhhhhh............ Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3chx J  12 PFHSVAEAAGCVKTTDWMFLTLLFLAVLGGYHIHFMLTAGDWDFWVDWKDRRMWPTVVPILGVTFAAAAQAFFWENFKLPFGATFAVSGLLIGEWINRYCNFWGWTYFPISLVFPSALVVPALWLDIIMLLSGSYVITAVVGSLGWGLLFYPNNWPAIAALHQATEQHGQLMSLADLVGFHFVRTSMPEYIRMVERGTLRTFGKEVVPVAAFFSGFVSMMVYFLWWFVGKWYSTTKVI 249
                                    21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241        


Chain K from PDB  Type:PROTEIN  Length:159
 aligned with Q9KX51_METTR | Q9KX51 from UniProtKB/TrEMBL  Length:256

    Alignment length:159
                                    27        37        47        57        67        77        87        97       107       117       127       137       147       157       167         
         Q9KX51_METTR    18 IVDLRGMWVGVAGLNIFYLIVRIYEQIYGWRAGLDSFAPEFQTYWLSILWTEIPLELVSGLALAGWLWKTRDRNVDAVAPREELRRHVVLVEWLVVYAVAIYWGASFFTEQDGTWHMTVIRDTDFTPSHIIEFYMSYPIYSIMAVGAFFYAKTRIPYFA 176
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 3chxK00 K:18-176 Particulate methane monooxygenase subunit c2. Chain: C                                                                                         CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....hhhhhhhhhhhhhhhhhhhh.hhhhh...................hhhhhhhhhhhhhhhhhhhh........hhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhh........hhhhhh...hhhhhhhhhhhhhhhhhhh...... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3chx K  18 IVDLRGMWVGVAGLNIFYLIVRIYEQIYGWRAGLDSFAPEFQTYWLSILWTEIPLELVSGLALAGWLWKTRDRNVDAVAPREELRRHVVLVEWLVVYAVAIYWGASFFTEQDGTWHMTVIRDTDFTPSHIIEFYMSYPIYSIMAVGAFFYAKTRIPYFA 176
                                    27        37        47        57        67        77        87        97       107       117       127       137       147       157       167         


Chain L from PDB  Type:PROTEIN  Length:20
                                                    
               SCOP domains -------------------- SCOP domains
               CATH domains -------------------- CATH domains
               Pfam domains -------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) -------------------- SAPs(SNPs)
                    PROSITE -------------------- PROSITE
                 Transcript -------------------- Transcript
                 3chx L 501 xxxxxxxxxxxxxxxxxxxx 520
                            |||||||510|||||||520
                            ||||||509-UNK||518-UNK
                          501-UNK||510-UNK||519-UNK
                           502-UNK||511-UNK||520-UNK
                            503-UNK| 512-UNK|   
                             504-UNK  513-UNK   
                              505-UNK  514-UNK  
                               506-UNK  515-UNK 
                                507-UNK  516-UNK
                                 508-UNK  517-UNK


Chain M from PDB  Type:PROTEIN  Length:26
                                                          
               SCOP domains -------------------------- SCOP domains
               CATH domains -------------------------- CATH domains
               Pfam domains -------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) -------------------------- SAPs(SNPs)
                    PROSITE -------------------------- PROSITE
                 Transcript -------------------------- Transcript
                 3chx M   1 xxxxxxxxxxxxxxxxxxxxxxxxxx  26
                            ||||||||10||||||||20||||||
                            ||||||||9-UNK|||18-UNK||||
                            1-UNK|||10-UNK|||19-UNK|||
                             2-UNK|| 11-UNK|| 20-UNK||
                              3-UNK|  12-UNK|  21-UNK|
                               4-UNK   13-UNK   22-UNK
                                5-UNK   14-UNK   23-UNK
                                 6-UNK   15-UNK   24-UNK
                                  7-UNK   16-UNK   25-UNK
                                   8-UNK   17-UNK   26-UNK


Chain N from PDB  Type:PROTEIN  Length:26
                                                          
               SCOP domains -------------------------- SCOP domains
               CATH domains -------------------------- CATH domains
               Pfam domains -------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) -------------------------- SAPs(SNPs)
                    PROSITE -------------------------- PROSITE
                 Transcript -------------------------- Transcript
                 3chx N   1 xxxxxxxxxxxxxxxxxxxxxxxxxx  26
                            ||||||||10||||||||20||||||
                            ||||||||9-UNK|||18-UNK||||
                            1-UNK|||10-UNK|||19-UNK|||
                             2-UNK|| 11-UNK|| 20-UNK||
                              3-UNK|  12-UNK|  21-UNK|
                               4-UNK   13-UNK   22-UNK
                                5-UNK   14-UNK   23-UNK
                                 6-UNK   15-UNK   24-UNK
                                  7-UNK   16-UNK   25-UNK
                                   8-UNK   17-UNK   26-UNK


Chain O from PDB  Type:PROTEIN  Length:26
                                                          
               SCOP domains -------------------------- SCOP domains
               CATH domains -------------------------- CATH domains
               Pfam domains -------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) -------------------------- SAPs(SNPs)
                    PROSITE -------------------------- PROSITE
                 Transcript -------------------------- Transcript
                 3chx O   1 xxxxxxxxxxxxxxxxxxxxxxxxxx  26
                            ||||||||10||||||||20||||||
                            ||||||||9-UNK|||18-UNK||||
                            1-UNK|||10-UNK|||19-UNK|||
                             2-UNK|| 11-UNK|| 20-UNK||
                              3-UNK|  12-UNK|  21-UNK|
                               4-UNK   13-UNK   22-UNK
                                5-UNK   14-UNK   23-UNK
                                 6-UNK   15-UNK   24-UNK
                                  7-UNK   16-UNK   25-UNK
                                   8-UNK   17-UNK   26-UNK
   Legend:   → Mismatch (orange background)
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    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 3CHX)

(-) CATH Domains  (5, 15)

Asymmetric/Biological Unit
(-)
Class: Mainly Alpha (13335)
(-)
Class: Mainly Beta (13760)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 3CHX)

(-) Gene Ontology  (3, 7)

Asymmetric/Biological Unit(hide GO term definitions)
Chain A,E,I   (Q9KX50_METTR | Q9KX50)
cellular component
    GO:0016021    integral component of membrane    The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
    GO:0016020    membrane    A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.

Chain B,F,J   (Q50541_METTR | Q50541)
cellular component
    GO:0016021    integral component of membrane    The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
    GO:0016020    membrane    A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.

Chain C,G,K   (Q9KX51_METTR | Q9KX51)
molecular function
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.
cellular component
    GO:0016021    integral component of membrane    The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
    GO:0016020    membrane    A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.

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  3chx
    Family and Domain Information: ProDom | SYSTERS
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  Q50541_METTR | Q50541
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  Q9KX50_METTR | Q9KX50
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  Q9KX51_METTR | Q9KX51
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  Q50541_METTR | Q50541
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

(no "Entries Sharing at Least One Protein Chain" available for 3CHX)

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(no "Related Entries Specified in the PDB File" available for 3CHX)