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3CHX
Asym. Unit
Info
Asym.Unit (334 KB)
Biol.Unit 1 (325 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF METHYLOSINUS TRICHOSPORIUM OB3B PARTICULATE METHANE MONOOXYGENASE (PMMO)
Authors
:
A. S. Hakemian
Date
:
10 Mar 08 (Deposition) - 15 Jul 08 (Release) - 24 Sep 14 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
3.90
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H,I,J,K,L,M,N,O
Biol. Unit 1: A,B,C,D,E,F,G,H,I,J,K,L,M,N,O (1x)
Keywords
:
Membrane Protein, Methane, Beta Barrel
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
A. S. Hakemian, K. C. Kondapalli, J. Telser, B. M. Hoffman, T. L. Stemmler, A. C. Rosenzweig
The Metal Centers Of Particulate Methane Monooxygenase From Methylosinus Trichosporium Ob3B.
Biochemistry V. 47 6793 2008
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Hetero Components
(2, 147)
Info
All Hetero Components
1a: COPPER (II) ION (CUa)
1b: COPPER (II) ION (CUb)
1c: COPPER (II) ION (CUc)
1d: COPPER (II) ION (CUd)
1e: COPPER (II) ION (CUe)
1f: COPPER (II) ION (CUf)
1g: COPPER (II) ION (CUg)
1h: COPPER (II) ION (CUh)
1i: COPPER (II) ION (CUi)
2a: (UNKa)
2aa: (UNKaa)
2ab: (UNKab)
2ac: (UNKac)
2ad: (UNKad)
2ae: (UNKae)
2af: (UNKaf)
2ag: (UNKag)
2ah: (UNKah)
2ai: (UNKai)
2aj: (UNKaj)
2ak: (UNKak)
2al: (UNKal)
2am: (UNKam)
2an: (UNKan)
2ao: (UNKao)
2ap: (UNKap)
2aq: (UNKaq)
2ar: (UNKar)
2as: (UNKas)
2at: (UNKat)
2au: (UNKau)
2av: (UNKav)
2aw: (UNKaw)
2ax: (UNKax)
2ay: (UNKay)
2az: (UNKaz)
2b: (UNKb)
2ba: (UNKba)
2bb: (UNKbb)
2bc: (UNKbc)
2bd: (UNKbd)
2be: (UNKbe)
2bf: (UNKbf)
2bg: (UNKbg)
2bh: (UNKbh)
2bi: (UNKbi)
2bj: (UNKbj)
2bk: (UNKbk)
2bl: (UNKbl)
2bm: (UNKbm)
2bn: (UNKbn)
2bo: (UNKbo)
2bp: (UNKbp)
2bq: (UNKbq)
2br: (UNKbr)
2bs: (UNKbs)
2bt: (UNKbt)
2bu: (UNKbu)
2bv: (UNKbv)
2bw: (UNKbw)
2bx: (UNKbx)
2by: (UNKby)
2bz: (UNKbz)
2c: (UNKc)
2ca: (UNKca)
2cb: (UNKcb)
2cc: (UNKcc)
2cd: (UNKcd)
2ce: (UNKce)
2cf: (UNKcf)
2cg: (UNKcg)
2ch: (UNKch)
2ci: (UNKci)
2cj: (UNKcj)
2ck: (UNKck)
2cl: (UNKcl)
2cm: (UNKcm)
2cn: (UNKcn)
2co: (UNKco)
2cp: (UNKcp)
2cq: (UNKcq)
2cr: (UNKcr)
2cs: (UNKcs)
2ct: (UNKct)
2cu: (UNKcu)
2cv: (UNKcv)
2cw: (UNKcw)
2cx: (UNKcx)
2cy: (UNKcy)
2cz: (UNKcz)
2d: (UNKd)
2da: (UNKda)
2db: (UNKdb)
2dc: (UNKdc)
2dd: (UNKdd)
2de: (UNKde)
2df: (UNKdf)
2dg: (UNKdg)
2dh: (UNKdh)
2di: (UNKdi)
2dj: (UNKdj)
2dk: (UNKdk)
2dl: (UNKdl)
2dm: (UNKdm)
2dn: (UNKdn)
2do: (UNKdo)
2dp: (UNKdp)
2dq: (UNKdq)
2dr: (UNKdr)
2ds: (UNKds)
2dt: (UNKdt)
2du: (UNKdu)
2dv: (UNKdv)
2dw: (UNKdw)
2dx: (UNKdx)
2dy: (UNKdy)
2dz: (UNKdz)
2e: (UNKe)
2ea: (UNKea)
2eb: (UNKeb)
2ec: (UNKec)
2ed: (UNKed)
2ee: (UNKee)
2ef: (UNKef)
2eg: (UNKeg)
2eh: (UNKeh)
2f: (UNKf)
2g: (UNKg)
2h: (UNKh)
2i: (UNKi)
2j: (UNKj)
2k: (UNKk)
2l: (UNKl)
2m: (UNKm)
2n: (UNKn)
2o: (UNKo)
2p: (UNKp)
2q: (UNKq)
2r: (UNKr)
2s: (UNKs)
2t: (UNKt)
2u: (UNKu)
2v: (UNKv)
2w: (UNKw)
2x: (UNKx)
2y: (UNKy)
2z: (UNKz)
View:
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Label:
No.
Name
Count
Type
Full Name
1
CU
9
Ligand/Ion
COPPER (II) ION
2
UNK
138
Mod. Amino Acid
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Sites
(9, 9)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
6: AC6 (SOFTWARE)
7: AC7 (SOFTWARE)
8: AC8 (SOFTWARE)
9: AC9 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
ASP C:129 , HIS C:133 , HIS C:146
BINDING SITE FOR RESIDUE CU C 661
2
AC2
SOFTWARE
HIS A:40 , HIS A:144 , HIS A:146
BINDING SITE FOR RESIDUE CU A 711
3
AC3
SOFTWARE
HIS A:40 , GLU A:42 , HIS A:146
BINDING SITE FOR RESIDUE CU A 712
4
AC4
SOFTWARE
ASP G:129 , HIS G:133 , HIS G:146
BINDING SITE FOR RESIDUE CU G 662
5
AC5
SOFTWARE
HIS E:40 , HIS E:144 , HIS E:146
BINDING SITE FOR RESIDUE CU E 721
6
AC6
SOFTWARE
HIS E:40 , GLU E:42 , HIS E:146
BINDING SITE FOR RESIDUE CU E 722
7
AC7
SOFTWARE
ASP K:129 , HIS K:133 , HIS K:146
BINDING SITE FOR RESIDUE CU K 663
8
AC8
SOFTWARE
HIS I:40 , HIS I:144 , HIS I:146
BINDING SITE FOR RESIDUE CU I 731
9
AC9
SOFTWARE
HIS I:40 , GLU I:42 , HIS I:146
BINDING SITE FOR RESIDUE CU I 732
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
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PROSITE Patterns/Profiles
(0, 0)
Info
All PROSITE Patterns/Profiles
;
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Sorry, no Info available
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Exons
(0, 0)
Info
All Exons
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All Exon Boundaries
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(0, 0)
Info
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CATH Domains
(5, 15)
Info
all CATH domains
1a: CATH_3chxA02 (A:175-271)
1b: CATH_3chxE02 (E:175-271)
1c: CATH_3chxI02 (I:175-271)
2a: CATH_3chxC00 (C:18-176)
2b: CATH_3chxG00 (G:18-176)
2c: CATH_3chxK00 (K:18-176)
3a: CATH_3chxB00 (B:12-249)
3b: CATH_3chxF00 (F:12-249)
3c: CATH_3chxJ00 (J:12-249)
4a: CATH_3chxA03 (A:295-426)
4b: CATH_3chxE03 (E:295-426)
4c: CATH_3chxI03 (I:295-426)
5a: CATH_3chxA01 (A:40-174,A:272-283)
5b: CATH_3chxE01 (E:40-174,E:272-283)
5c: CATH_3chxI01 (I:40-174,I:272-283)
View:
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Classes
(
)
(
)
Architectures
(
)
(
)
Topologies
(
)
(
)
Homologous Superfamilies
(
)
(
)
Organisms
(
)
(
)
Class
:
Mainly Alpha
(13335)
Architecture
:
Orthogonal Bundle
(10391)
Topology
:
Helix Hairpins
(718)
Homologous Superfamily
:
Helix hairpin bin
(2)
Methylosinus trichosporium.
(1)
1a
3chxA02
A:175-271
1b
3chxE02
E:175-271
1c
3chxI02
I:175-271
Architecture
:
Up-down Bundle
(3216)
Topology
:
Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2
(267)
Homologous Superfamily
:
Particulate methane monooxygenase subunit c2. Chain: C
(2)
Methylosinus trichosporium.
(1)
2a
3chxC00
C:18-176
2b
3chxG00
G:18-176
2c
3chxK00
K:18-176
Topology
:
particulate methane monooxygenase, chain B
(2)
Homologous Superfamily
:
particulate methane monooxygenase, chain B
(2)
Methylosinus trichosporium.
(1)
3a
3chxB00
B:12-249
3b
3chxF00
F:12-249
3c
3chxJ00
J:12-249
Class
:
Mainly Beta
(13760)
Architecture
:
Sandwich
(5577)
Topology
:
Immunoglobulin-like
(3897)
Homologous Superfamily
:
Particulate methane monooxygenase, b subunit. Chain: A, domain 3
(2)
Methylosinus trichosporium.
(1)
4a
3chxA03
A:295-426
4b
3chxE03
E:295-426
4c
3chxI03
I:295-426
Topology
:
Jelly Rolls
(1293)
Homologous Superfamily
:
Particulate methane monooxygenase, b subunit. Chain: A, domain 1
(2)
Methylosinus trichosporium.
(1)
5a
3chxA01
A:40-174,A:272-283
5b
3chxE01
E:40-174,E:272-283
5c
3chxI01
I:40-174,I:272-283
[
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]
Pfam Domains
(0, 0)
Info
all PFAM domains
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Sorry, no Info available
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Chain O
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