Show PDB file:   
         Plain Text   HTML   (compressed file size)
QuickSearch:   
by PDB,NDB,UniProt,PROSITE Code or Search Term(s)  
(-)Asymmetric Unit
(-)Asym. Unit - sites
(-)Biological Unit 1
(-)Biol. Unit 1 - sites
(-)Biological Unit 2
collapse expand < >
Image Asymmetric Unit
Asymmetric Unit  (Jmol Viewer)
Image Asym. Unit - sites
Asym. Unit - sites  (Jmol Viewer)
Image Biological Unit 1
Biological Unit 1  (Jmol Viewer)
Image Biol. Unit 1 - sites
Biol. Unit 1 - sites  (Jmol Viewer)
Image Biological Unit 2
Biological Unit 2  (Jmol Viewer)

(-) Description

Title :  CRYSTAL STRUCTURE OF HUMAN DPP4 IN COMPLEX WITH A BENZIMIDAZOLE DERIVATIVE
 
Authors :  M. B. Wallace, R. J. Skene
Date :  25 Feb 08  (Deposition) - 21 Oct 08  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.49
Chains :  Asym. Unit :  A,B,C,D
Biol. Unit 1:  A,B  (1x)
Biol. Unit 2:  C,D  (1x)
Keywords :  Structure-Based Design, Denzimidazole Derivatives, Peptidase, Aminopeptidase, Glycoprotein, Hydrolase, Membrane, Protease, Secreted, Serine Protease, Signal-Anchor, Transmembrane (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  M. B. Wallace, J. Feng, Z. Zhang, R. J. Skene, L. Shi, C. L. Caster, D. B. Kassel, R. Xu, S. L. Gwaltney
Structure-Based Design And Synthesis Of Benzimidazole Derivatives As Dipeptidyl Peptidase Iv Inhibitors.
Bioorg. Med. Chem. Lett. V. 18 2362 2008
PubMed-ID: 18346892  |  Reference-DOI: 10.1016/J.BMCL.2008.02.071

(-) Compounds

Molecule 1 - DIPEPTIDYL PEPTIDASE 4
    ChainsA, B, C, D
    EC Number3.4.14.5
    EngineeredYES
    Expression SystemSPODOPTERA FRUGIPERDA
    Expression System Cell LineSF9
    Expression System CommonFALL ARMYWORM
    Expression System VectorPSXB9
    Expression System Vector TypeBACULOVIRUS
    GeneDPP4, ADCP2, CD26
    Organism CommonHUMAN
    Organism ScientificHOMO SAPIENS
    SynonymDIPEPTIDYL PEPTIDASE IV, DPP IV, T-CELL ACTIVATION ANTIGEN CD26, TP103, ADENOSINE DEAMINASE COMPLEXING PROTEIN 2, ADABP

 Structural Features

(-) Chains, Units

  1234
Asymmetric Unit ABCD
Biological Unit 1 (1x)AB  
Biological Unit 2 (1x)  CD

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 26)

Asymmetric Unit (2, 26)
No.NameCountTypeFull Name
1B2Y4Ligand/Ion1-BIPHENYL-2-YLMETHANAMINE
2NAG22Ligand/IonN-ACETYL-D-GLUCOSAMINE
Biological Unit 1 (2, 16)
No.NameCountTypeFull Name
1B2Y2Ligand/Ion1-BIPHENYL-2-YLMETHANAMINE
2NAG14Ligand/IonN-ACETYL-D-GLUCOSAMINE
Biological Unit 2 (2, 10)
No.NameCountTypeFull Name
1B2Y2Ligand/Ion1-BIPHENYL-2-YLMETHANAMINE
2NAG8Ligand/IonN-ACETYL-D-GLUCOSAMINE

(-) Sites  (21, 21)

Asymmetric Unit (21, 21)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREASN A:85 , SER A:87BINDING SITE FOR RESIDUE NAG A 801
02AC2SOFTWAREILE A:148 , ASN A:150BINDING SITE FOR RESIDUE NAG A 802
03AC3SOFTWAREASN A:219 , THR A:221 , GLN A:308 , GLU A:309BINDING SITE FOR RESIDUE NAG A 803
04AC4SOFTWAREILE A:194 , ASN A:229 , THR A:231 , GLU A:232BINDING SITE FOR RESIDUE NAG A 804
05AC5SOFTWARETRP A:187 , ASN A:281BINDING SITE FOR RESIDUE NAG A 806
06AC6SOFTWARETRP A:187BINDING SITE FOR RESIDUE NAG A 807
07AC7SOFTWAREILE A:319 , ASN A:321 , SER A:349BINDING SITE FOR RESIDUE NAG A 808
08AC8SOFTWAREARG B:147 , ILE B:148 , ASN B:150BINDING SITE FOR RESIDUE NAG B 802
09AC9SOFTWAREASN B:219 , THR B:221 , GLN B:308 , GLU B:309BINDING SITE FOR RESIDUE NAG B 803
10BC1SOFTWAREILE B:194 , ASN B:229 , THR B:231BINDING SITE FOR RESIDUE NAG B 804
11BC2SOFTWAREGLU B:232BINDING SITE FOR RESIDUE NAG B 805
12BC3SOFTWAREASN C:219 , THR C:221 , GLN C:308 , GLU C:309BINDING SITE FOR RESIDUE NAG C 802
13BC4SOFTWAREGLN C:227 , ASN C:229 , THR C:231BINDING SITE FOR RESIDUE NAG C 803
14BC5SOFTWAREGLU C:232BINDING SITE FOR RESIDUE NAG C 804
15BC6SOFTWAREARG D:147 , ILE D:148 , ASN D:150BINDING SITE FOR RESIDUE NAG D 801
16BC7SOFTWAREILE D:194 , ASN D:229 , THR D:231 , GLU D:232BINDING SITE FOR RESIDUE NAG D 802
17BC8SOFTWARETRP D:187 , ASN D:281BINDING SITE FOR RESIDUE NAG D 804
18BC9SOFTWAREARG A:125 , GLU A:205 , GLU A:206 , TYR A:547 , SER A:630 , TYR A:662BINDING SITE FOR RESIDUE B2Y A 800
19CC1SOFTWAREARG B:125 , GLU B:205 , GLU B:206 , TYR B:547 , SER B:630 , TYR B:662 , TYR B:666 , HIS B:740BINDING SITE FOR RESIDUE B2Y B 800
20CC2SOFTWAREARG C:125 , GLU C:205 , GLU C:206 , TYR C:547 , TYR C:662 , TYR C:666BINDING SITE FOR RESIDUE B2Y C 800
21CC3SOFTWAREARG D:125 , GLU D:205 , GLU D:206 , TYR D:547 , SER D:630 , TYR D:662 , TYR D:666BINDING SITE FOR RESIDUE B2Y D 800

(-) SS Bonds  (20, 20)

Asymmetric Unit
No.Residues
1A:328 -A:339
2A:385 -A:394
3A:444 -A:447
4A:454 -A:472
5A:649 -A:762
6B:328 -B:339
7B:385 -B:394
8B:444 -B:447
9B:454 -B:472
10B:649 -B:762
11C:328 -C:339
12C:385 -C:394
13C:444 -C:447
14C:454 -C:472
15C:649 -C:762
16D:328 -D:339
17D:385 -D:394
18D:444 -D:447
19D:454 -D:472
20D:649 -D:762

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 3CCB)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 3CCB)

(-) PROSITE Motifs  (1, 4)

Asymmetric Unit (1, 4)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1PRO_ENDOPEP_SERPS00708 Prolyl endopeptidase family serine active site.DPP4_HUMAN605-635
 
 
 
  4A:605-635
B:605-635
C:605-635
D:605-635
Biological Unit 1 (1, 2)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1PRO_ENDOPEP_SERPS00708 Prolyl endopeptidase family serine active site.DPP4_HUMAN605-635
 
 
 
  2A:605-635
B:605-635
-
-
Biological Unit 2 (1, 2)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1PRO_ENDOPEP_SERPS00708 Prolyl endopeptidase family serine active site.DPP4_HUMAN605-635
 
 
 
  2-
-
C:605-635
D:605-635

(-) Exons   (24, 96)

Asymmetric Unit (24, 96)
 ENSEMBLUniProtKBPDB
No.Transcript IDExonExon IDGenome LocationLengthIDLocationLengthCountLocationLength
1.1aENST000003605341aENSE00001428031chr2:162931052-162930486567DPP4_HUMAN1-220--
1.2bENST000003605342bENSE00001405430chr2:162929996-16292990988DPP4_HUMAN3-32300--
1.3aENST000003605343aENSE00001407496chr2:162904011-16290391399DPP4_HUMAN32-65344A:41-65
B:36-65
C:41-65
D:41-65
25
30
25
25
1.4aENST000003605344aENSE00001401296chr2:162903516-16290342592DPP4_HUMAN65-95314A:65-95 (gaps)
B:65-95 (gaps)
C:65-95 (gaps)
D:65-95 (gaps)
31
31
31
31
1.5ENST000003605345ENSE00001700120chr2:162902122-16290204281DPP4_HUMAN96-122274A:96-122
B:96-122
C:96-122
D:96-122
27
27
27
27
1.6ENST000003605346ENSE00001731265chr2:162895694-16289564253DPP4_HUMAN123-140184A:123-140
B:123-140
C:123-140
D:123-140
18
18
18
18
1.7bENST000003605347bENSE00001687658chr2:162895531-16289545973DPP4_HUMAN140-164254A:140-164
B:140-164
C:140-164
D:140-164
25
25
25
25
1.8cENST000003605348cENSE00001752447chr2:162894932-162894812121DPP4_HUMAN165-205414A:165-205
B:165-205
C:165-205
D:165-205
41
41
41
41
1.9ENST000003605349ENSE00001671980chr2:162891834-162891674161DPP4_HUMAN205-258544A:205-258
B:205-258
C:205-258
D:205-258
54
54
54
54
1.10ENST0000036053410ENSE00001629068chr2:162890163-162890051113DPP4_HUMAN259-296384A:259-296
B:259-296
C:259-296
D:259-296
38
38
38
38
1.12ENST0000036053412ENSE00001774486chr2:162881449-162881314136DPP4_HUMAN296-341464A:296-341
B:296-341
C:296-341
D:296-341
46
46
46
46
1.13ENST0000036053413ENSE00001608277chr2:162879309-16287926545DPP4_HUMAN342-356154A:342-356
B:342-356
C:342-356
D:342-356
15
15
15
15
1.15ENST0000036053415ENSE00001792529chr2:162877198-162877091108DPP4_HUMAN357-392364A:357-392
B:357-392
C:357-392
D:357-392
36
36
36
36
1.16ENST0000036053416ENSE00001609652chr2:162876806-16287673968DPP4_HUMAN393-415234A:393-415
B:393-415
C:393-415
D:393-415
23
23
23
23
1.17ENST0000036053417ENSE00001661516chr2:162875786-16287573354DPP4_HUMAN415-433194A:415-433
B:415-433
C:415-433
D:415-433
19
19
19
19
1.18ENST0000036053418ENSE00001734062chr2:162875360-162875239122DPP4_HUMAN433-474424A:433-474
B:433-474
C:433-474
D:433-474
42
42
42
42
1.20ENST0000036053420ENSE00001689663chr2:162873665-16287361848DPP4_HUMAN474-490174A:474-490
B:474-490
C:474-490
D:474-490
17
17
17
17
1.21bENST0000036053421bENSE00001601165chr2:162873376-16287327899DPP4_HUMAN490-523344A:490-523
B:490-523
C:490-523
D:490-523
34
34
34
34
1.22aENST0000036053422aENSE00001793185chr2:162870975-16287090670DPP4_HUMAN523-546244A:523-546
B:523-546
C:523-546
D:523-546
24
24
24
24
1.23ENST0000036053423ENSE00001624874chr2:162868497-162868303195DPP4_HUMAN546-611664A:546-611
B:546-611
C:546-611
D:546-611
66
66
66
66
1.24ENST0000036053424ENSE00001805530chr2:162865805-16286575155DPP4_HUMAN611-629194A:611-629
B:611-629
C:611-629
D:611-629
19
19
19
19
1.25ENST0000036053425ENSE00001766271chr2:162865171-162865072100DPP4_HUMAN630-663344A:630-663
B:630-663
C:630-663
D:630-663
34
34
34
34
1.26aENST0000036053426aENSE00001658910chr2:162862319-16286225565DPP4_HUMAN663-684224A:663-684
B:663-684
C:663-684
D:663-684
22
22
22
22
1.27aENST0000036053427aENSE00001776448chr2:162851882-16285181073DPP4_HUMAN685-709254A:685-709
B:685-709
C:685-709
D:685-709
25
25
25
25
1.28ENST0000036053428ENSE00001768665chr2:162851544-16285147174DPP4_HUMAN709-733254A:709-733
B:709-733
C:709-733
D:709-733
25
25
25
25
1.29bENST0000036053429bENSE00001420909chr2:162849894-1628487511144DPP4_HUMAN734-766334A:734-766
B:734-766
C:734-766
D:734-766
33
33
33
33

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain A from PDB  Type:PROTEIN  Length:724
 aligned with DPP4_HUMAN | P27487 from UniProtKB/Swiss-Prot  Length:766

    Alignment length:726
                                    50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550       560       570       580       590       600       610       620       630       640       650       660       670       680       690       700       710       720       730       740       750       760      
           DPP4_HUMAN    41 KTYTLTDYLKNTYRLKLYSLRWISDHEYLYKQENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLITEERIPNNTQWVTWSPVGHKLAYVWNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDCTFITKGTWEVIGIEALTSDYLYYISNEYKGMPGGRNLYKIQLSDYTKVTCLSCELNPERCQYYSVSFSKEAKYYQLRCSGPGLPLYTLHSSVNDKGLRVLEDNSALDKMLQNVQMPSKKLDFIILNETKFWYQMILPPHFDKSKKYPLLLDVYAGPCSQKADTVFRLNWATYLASTENIIVASFDGRGSGYQGDKIMHAINRRLGTFEVEDQIEAARQFSKMGFVDNKRIAIWGWSYGGYVTSMVLGSGSGVFKCGIAVAPVSRWEYYDSVYTERYMGLPTPEDNLDHYRNSTVMSRAENFKQVEYLLIHGTADDNVHFQQSAQISKALVDVGVDFQAMWYTDEDHGIASSTAHQHIYTHMSHFIKQCFSLP 766
               SCOP domains d3ccba1 A:41-508 Dipeptidyl pept  idase IV/CD26, N-terminal domain                                                                                                                                                                                                                                                                                                                                                                                                                  d3ccba2 A:509-766 Dipeptidyl peptidase IV/CD26, C-terminal domain                                                                                                                                                                                                  SCOP domains
               CATH domains 3ccbA01 A:41-508  [code=2.140.10  .30, no name defined]                                                                                                                                                                                                                                                                                                                                                                                                                             3ccbA02 A:509-766  [code=3.40.50.1820, no name defined]                                                                                                                                                                                                            CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ...hhhhhhhh.........ee....eeee..--.eeeee.....eeeee....hhhhh....eeee.....eeeeeeeeee.....eeeeeeeee....ee.........eeeeee......eeeee..eeeee.......ee.........eee...hhhhhhhh......eee.....eeeeeeee.....eeeeee.........eeeeee.........eeeeeeee...........eee...hhhhhh..eeeeeeeeee..eeeeeeee....eeeeeeeee......eee.hhhheeee..............ee.....eeeeeee.....eeeeeee......ee.......eeeeeee...eeeeee.hhhhh....eeeeee......eee............eeeee.....eeeeee......eeeeee.....eeeeee.hhhhhhhhhhh...eeeeeeee....eeeeeeee.........eeeeeee...............hhhhhhhhhhh.eeeeee.......hhhhhhhhh....hhhhhhhhhhhhhhhh...eeeeeeeeeeehhhhhhhhhhhh.......eeeee....hhhhhhhhhhhhhhh......hhhhhhhh.hhhhhhhhhhheeeeeee......hhhhhhhhhhhhhhh....eeeee........hhhhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PRO_ENDOPEP_SER  PDB: A:605-635----------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.3a  PDB: A:41-65  ------------------------------Exon 1.5  PDB: A:96-122    Exon 1.6          ------------------------Exon 1.8c  PDB: A:165-205                -----------------------------------------------------Exon 1.10  PDB: A:259-296             ---------------------------------------------Exon 1.13      Exon 1.15  PDB: A:357-392           Exon 1.16              -----------------Exon 1.18  PDB: A:433-474 UniProt: 433-474---------------Exon 1.21b  PDB: A:490-523        ----------------------Exon 1.23  PDB: A:546-611 UniProt: 546-611                        ------------------Exon 1.25  PDB: A:630-663         ---------------------Exon 1.27a  PDB: A:685-70------------------------Exon 1.29b  PDB: A:734-766        Transcript 1 (1)
           Transcript 1 (2) ------------------------Exon 1.4a  PDB: A:65-95 (gaps) --------------------------------------------Exon 1.7b  PDB: A:140-164----------------------------------------Exon 1.9  PDB: A:205-258 UniProt: 205-258             -------------------------------------Exon 1.12  PDB: A:296-341 UniProt: 296-341    -------------------------------------------------------------------------Exon 1.17          ----------------------------------------Exon 1.20        --------------------------------Exon 1.22a              ----------------------------------------------------------------Exon 1.24          ---------------------------------Exon 1.26a            ------------------------Exon 1.28  PDB: A:709-733--------------------------------- Transcript 1 (2)
                 3ccb A  41 KTYTLTDYLKNTYRLKLYSLRWISDHEYLYKQ--NILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLITEERIPNNTQWVTWSPVGHKLAYVWNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDCTFITKGTWEVIGIEALTSDYLYYISNEYKGMPGGRNLYKIQLSDYTKVTCLSCELNPERCQYYSVSFSKEAKYYQLRCSGPGLPLYTLHSSVNDKGLRVLEDNSALDKMLQNVQMPSKKLDFIILNETKFWYQMILPPHFDKSKKYPLLLDVYAGPCSQKADTVFRLNWATYLASTENIIVASFDGRGSGYQGDKIMHAINRRLGTFEVEDQIEAARQFSKMGFVDNKRIAIWGWSYGGYVTSMVLGSGSGVFKCGIAVAPVSRWEYYDSVYTERYMGLPTPEDNLDHYRNSTVMSRAENFKQVEYLLIHGTADDNVHFQQSAQISKALVDVGVDFQAMWYTDEDHGIASSTAHQHIYTHMSHFIKQCFSLP 766
                                    50        60        70 |  |   80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550       560       570       580       590       600       610       620       630       640       650       660       670       680       690       700       710       720       730       740       750       760      
                                                          72 75                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   

Chain B from PDB  Type:PROTEIN  Length:729
 aligned with DPP4_HUMAN | P27487 from UniProtKB/Swiss-Prot  Length:766

    Alignment length:731
                                    45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       395       405       415       425       435       445       455       465       475       485       495       505       515       525       535       545       555       565       575       585       595       605       615       625       635       645       655       665       675       685       695       705       715       725       735       745       755       765 
           DPP4_HUMAN    36 TADSRKTYTLTDYLKNTYRLKLYSLRWISDHEYLYKQENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLITEERIPNNTQWVTWSPVGHKLAYVWNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDCTFITKGTWEVIGIEALTSDYLYYISNEYKGMPGGRNLYKIQLSDYTKVTCLSCELNPERCQYYSVSFSKEAKYYQLRCSGPGLPLYTLHSSVNDKGLRVLEDNSALDKMLQNVQMPSKKLDFIILNETKFWYQMILPPHFDKSKKYPLLLDVYAGPCSQKADTVFRLNWATYLASTENIIVASFDGRGSGYQGDKIMHAINRRLGTFEVEDQIEAARQFSKMGFVDNKRIAIWGWSYGGYVTSMVLGSGSGVFKCGIAVAPVSRWEYYDSVYTERYMGLPTPEDNLDHYRNSTVMSRAENFKQVEYLLIHGTADDNVHFQQSAQISKALVDVGVDFQAMWYTDEDHGIASSTAHQHIYTHMSHFIKQCFSLP 766
               SCOP domains d3ccbb1 B:36-508 Dipeptidyl peptidase   IV/CD26, N-terminal domain                                                                                                                                                                                                                                                                                                                                                                                                                       d3ccbb2 B:509-766 Dipeptidyl peptidase IV/CD26, C-terminal domain                                                                                                                                                                                                  SCOP domains
               CATH domains 3ccbB01 B:36-508  [code=2.140.10.30,   no name defined]                                                                                                                                                                                                                                                                                                                                                                                                                                  3ccbB02 B:509-766  [code=3.40.50.1820, no name defined]                                                                                                                                                                                                            CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ........hhhhhhhh.........ee....eeee..--.eeeee.....eeeeehhhhhh.......eeee.....eeeeeeeeee.....eeeeeeeee....ee.........eeeeee......eeeee..eeeee.......ee.........eee...hhhhhhhh......eee.....eeeeeeee.....eeeeee.........eeeeee.........eeeeeeee...........eeee..hhhhhh..eeeeeeeeee..eeeeeeee....eeeeeeeeee....eeee.hhhheeee..............ee.....eeeeeee.....eeeeeee......ee.......eeeeeee...eeeeee.hhhhh....eeeeee..eeeeeee............eeeee.....eeeeee......eeeeee.....eeeeee.hhhhhhhhh.....eeeeeeeee..eeeeeeeee.........eeeeeee...............hhhhhhhhh...eeeee........hhhhhh.......hhhhhhhhhhhhhhhh...eeeeeeeeeeehhhhhhhhhhhh.......eeeee....hhhhhhhhhhhhhhh......hhhhhhhh.hhhhhhhhhhheeeeeee......hhhhhhhhhhhhhhh....eeeee........hhhhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PRO_ENDOPEP_SER  PDB: B:605-635----------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.3a  PDB: B:36-65       ------------------------------Exon 1.5  PDB: B:96-122    Exon 1.6          ------------------------Exon 1.8c  PDB: B:165-205                -----------------------------------------------------Exon 1.10  PDB: B:259-296             ---------------------------------------------Exon 1.13      Exon 1.15  PDB: B:357-392           Exon 1.16              -----------------Exon 1.18  PDB: B:433-474 UniProt: 433-474---------------Exon 1.21b  PDB: B:490-523        ----------------------Exon 1.23  PDB: B:546-611 UniProt: 546-611                        ------------------Exon 1.25  PDB: B:630-663         ---------------------Exon 1.27a  PDB: B:685-70------------------------Exon 1.29b  PDB: B:734-766        Transcript 1 (1)
           Transcript 1 (2) -----------------------------Exon 1.4a  PDB: B:65-95 (gaps) --------------------------------------------Exon 1.7b  PDB: B:140-164----------------------------------------Exon 1.9  PDB: B:205-258 UniProt: 205-258             -------------------------------------Exon 1.12  PDB: B:296-341 UniProt: 296-341    -------------------------------------------------------------------------Exon 1.17          ----------------------------------------Exon 1.20        --------------------------------Exon 1.22a              ----------------------------------------------------------------Exon 1.24          ---------------------------------Exon 1.26a            ------------------------Exon 1.28  PDB: B:709-733--------------------------------- Transcript 1 (2)
                 3ccb B  36 HHHSRKTYTLTDYLKNTYRLKLYSLRWISDHEYLYKQ--NILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLITEERIPNNTQWVTWSPVGHKLAYVWNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDCTFITKGTWEVIGIEALTSDYLYYISNEYKGMPGGRNLYKIQLSDYTKVTCLSCELNPERCQYYSVSFSKEAKYYQLRCSGPGLPLYTLHSSVNDKGLRVLEDNSALDKMLQNVQMPSKKLDFIILNETKFWYQMILPPHFDKSKKYPLLLDVYAGPCSQKADTVFRLNWATYLASTENIIVASFDGRGSGYQGDKIMHAINRRLGTFEVEDQIEAARQFSKMGFVDNKRIAIWGWSYGGYVTSMVLGSGSGVFKCGIAVAPVSRWEYYDSVYTERYMGLPTPEDNLDHYRNSTVMSRAENFKQVEYLLIHGTADDNVHFQQSAQISKALVDVGVDFQAMWYTDEDHGIASSTAHQHIYTHMSHFIKQCFSLP 766
                                    45        55        65      | 75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       395       405       415       425       435       445       455       465       475       485       495       505       515       525       535       545       555       565       575       585       595       605       615       625       635       645       655       665       675       685       695       705       715       725       735       745       755       765 
                                                               72 75                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   

Chain C from PDB  Type:PROTEIN  Length:724
 aligned with DPP4_HUMAN | P27487 from UniProtKB/Swiss-Prot  Length:766

    Alignment length:726
                                    50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550       560       570       580       590       600       610       620       630       640       650       660       670       680       690       700       710       720       730       740       750       760      
           DPP4_HUMAN    41 KTYTLTDYLKNTYRLKLYSLRWISDHEYLYKQENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLITEERIPNNTQWVTWSPVGHKLAYVWNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDCTFITKGTWEVIGIEALTSDYLYYISNEYKGMPGGRNLYKIQLSDYTKVTCLSCELNPERCQYYSVSFSKEAKYYQLRCSGPGLPLYTLHSSVNDKGLRVLEDNSALDKMLQNVQMPSKKLDFIILNETKFWYQMILPPHFDKSKKYPLLLDVYAGPCSQKADTVFRLNWATYLASTENIIVASFDGRGSGYQGDKIMHAINRRLGTFEVEDQIEAARQFSKMGFVDNKRIAIWGWSYGGYVTSMVLGSGSGVFKCGIAVAPVSRWEYYDSVYTERYMGLPTPEDNLDHYRNSTVMSRAENFKQVEYLLIHGTADDNVHFQQSAQISKALVDVGVDFQAMWYTDEDHGIASSTAHQHIYTHMSHFIKQCFSLP 766
               SCOP domains d3ccbc1 C:41-508 Dipeptidyl pept  idase IV/CD26, N-terminal domain                                                                                                                                                                                                                                                                                                                                                                                                                  d3ccbc2 C:509-766 Dipeptidyl peptidase IV/CD26, C-terminal domain                                                                                                                                                                                                  SCOP domains
               CATH domains 3ccbC01 C:41-508  [code=2.140.10  .30, no name defined]                                                                                                                                                                                                                                                                                                                                                                                                                             3ccbC02 C:509-766  [code=3.40.50.1820, no name defined]                                                                                                                                                                                                            CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ...hhhhhhhh........eee....eeee..--.eeeee.....eeeeehhhhh........eeee.....eeeeeeeeee.....eeeeeeeee...........eeeeeeeeee......eeeee..eeeee.......ee.........eee...hhhhhhh.......eee.....eeeeeeee.....eeeeee.........eeeeee.........eeeeeeee.hhh........ee...hhhhhh..eeeeeeee....eeeeeeee....eeeeeeeee......eee.hhhheeee..............ee.....eeeeeee.....eeeeeee......ee.......eeeeeee...eeeeee.hhhhh....eeeeee......eee............eeeee.....eeeeee......eeeeee.....eeeeee.hhhhhhhhh.....eeeeeeeee..eeeeeeeee.........eeeeeee...............hhhhhhhhh...eeeeee.......hhhhhhhhh....hhhhhhhhhhhhhhhh...eeeeeeeeeeehhhhhhhhhhhh.......eeeee....hhhhhhhhhhhhhhh......hhhhhhhh.hhhhhhhhhhheeeeeee......hhhhhhhhhhhhhhhh...eeeee........hhhhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PRO_ENDOPEP_SER  PDB: C:605-635----------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.3a  PDB: C:41-65  ------------------------------Exon 1.5  PDB: C:96-122    Exon 1.6          ------------------------Exon 1.8c  PDB: C:165-205                -----------------------------------------------------Exon 1.10  PDB: C:259-296             ---------------------------------------------Exon 1.13      Exon 1.15  PDB: C:357-392           Exon 1.16              -----------------Exon 1.18  PDB: C:433-474 UniProt: 433-474---------------Exon 1.21b  PDB: C:490-523        ----------------------Exon 1.23  PDB: C:546-611 UniProt: 546-611                        ------------------Exon 1.25  PDB: C:630-663         ---------------------Exon 1.27a  PDB: C:685-70------------------------Exon 1.29b  PDB: C:734-766        Transcript 1 (1)
           Transcript 1 (2) ------------------------Exon 1.4a  PDB: C:65-95 (gaps) --------------------------------------------Exon 1.7b  PDB: C:140-164----------------------------------------Exon 1.9  PDB: C:205-258 UniProt: 205-258             -------------------------------------Exon 1.12  PDB: C:296-341 UniProt: 296-341    -------------------------------------------------------------------------Exon 1.17          ----------------------------------------Exon 1.20        --------------------------------Exon 1.22a              ----------------------------------------------------------------Exon 1.24          ---------------------------------Exon 1.26a            ------------------------Exon 1.28  PDB: C:709-733--------------------------------- Transcript 1 (2)
                 3ccb C  41 KTYTLTDYLKNTYRLKLYSLRWISDHEYLYKQ--NILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLITEERIPNNTQWVTWSPVGHKLAYVWNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDCTFITKGTWEVIGIEALTSDYLYYISNEYKGMPGGRNLYKIQLSDYTKVTCLSCELNPERCQYYSVSFSKEAKYYQLRCSGPGLPLYTLHSSVNDKGLRVLEDNSALDKMLQNVQMPSKKLDFIILNETKFWYQMILPPHFDKSKKYPLLLDVYAGPCSQKADTVFRLNWATYLASTENIIVASFDGRGSGYQGDKIMHAINRRLGTFEVEDQIEAARQFSKMGFVDNKRIAIWGWSYGGYVTSMVLGSGSGVFKCGIAVAPVSRWEYYDSVYTERYMGLPTPEDNLDHYRNSTVMSRAENFKQVEYLLIHGTADDNVHFQQSAQISKALVDVGVDFQAMWYTDEDHGIASSTAHQHIYTHMSHFIKQCFSLP 766
                                    50        60        70 |  |   80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550       560       570       580       590       600       610       620       630       640       650       660       670       680       690       700       710       720       730       740       750       760      
                                                          72 75                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   

Chain D from PDB  Type:PROTEIN  Length:724
 aligned with DPP4_HUMAN | P27487 from UniProtKB/Swiss-Prot  Length:766

    Alignment length:726
                                    50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550       560       570       580       590       600       610       620       630       640       650       660       670       680       690       700       710       720       730       740       750       760      
           DPP4_HUMAN    41 KTYTLTDYLKNTYRLKLYSLRWISDHEYLYKQENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLITEERIPNNTQWVTWSPVGHKLAYVWNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDCTFITKGTWEVIGIEALTSDYLYYISNEYKGMPGGRNLYKIQLSDYTKVTCLSCELNPERCQYYSVSFSKEAKYYQLRCSGPGLPLYTLHSSVNDKGLRVLEDNSALDKMLQNVQMPSKKLDFIILNETKFWYQMILPPHFDKSKKYPLLLDVYAGPCSQKADTVFRLNWATYLASTENIIVASFDGRGSGYQGDKIMHAINRRLGTFEVEDQIEAARQFSKMGFVDNKRIAIWGWSYGGYVTSMVLGSGSGVFKCGIAVAPVSRWEYYDSVYTERYMGLPTPEDNLDHYRNSTVMSRAENFKQVEYLLIHGTADDNVHFQQSAQISKALVDVGVDFQAMWYTDEDHGIASSTAHQHIYTHMSHFIKQCFSLP 766
               SCOP domains d3ccbd1 D:41-508 Dipeptidyl pept  idase IV/CD26, N-terminal domain                                                                                                                                                                                                                                                                                                                                                                                                                  d3ccbd2 D:509-766 Dipeptidyl peptidase IV/CD26, C-terminal domain                                                                                                                                                                                                  SCOP domains
               CATH domains 3ccbD01 D:41-508  [code=2.140.10  .30, no name defined]                                                                                                                                                                                                                                                                                                                                                                                                                             3ccbD02 D:509-766  [code=3.40.50.1820, no name defined]                                                                                                                                                                                                            CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ...hhhhhhhh.........ee....eeee..--.eeeee.....eeeee.............eeee.....eeeeeeeeee.....eeeeeeeee...............eeeeee......eeeee..eeeee.......ee.........eee...hhhhhhhh......eee.....eeeeeeee.....eeeeee.........eeeeee.........eeeeeeee............eee..hhhhhh..eeeeeeee....eeeeeeee....eeeeeeeee......ee......eeee..............ee.....eeeeeee.....eeeeeee.....eee.......eeeeeee...eeeeee.hhhhh....eeeeee......eee............eeeee.....eeeeee......eeeeee.....eeeeee.hhhhhhhhh.....eeeeeeeee..eeeeeeeee.........eeeeee................hhhhhhhhh...eeeee........hhhhhhhhh....hhhhhhhhhhhhhhhh...eeeeeeeeeeehhhhhhhhhhhh.......eeeee....hhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhheeeeeee......hhhhhhhhhhhhhhh....eeeee........hhhhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PRO_ENDOPEP_SER  PDB: D:605-635----------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.3a  PDB: D:41-65  ------------------------------Exon 1.5  PDB: D:96-122    Exon 1.6          ------------------------Exon 1.8c  PDB: D:165-205                -----------------------------------------------------Exon 1.10  PDB: D:259-296             ---------------------------------------------Exon 1.13      Exon 1.15  PDB: D:357-392           Exon 1.16              -----------------Exon 1.18  PDB: D:433-474 UniProt: 433-474---------------Exon 1.21b  PDB: D:490-523        ----------------------Exon 1.23  PDB: D:546-611 UniProt: 546-611                        ------------------Exon 1.25  PDB: D:630-663         ---------------------Exon 1.27a  PDB: D:685-70------------------------Exon 1.29b  PDB: D:734-766        Transcript 1 (1)
           Transcript 1 (2) ------------------------Exon 1.4a  PDB: D:65-95 (gaps) --------------------------------------------Exon 1.7b  PDB: D:140-164----------------------------------------Exon 1.9  PDB: D:205-258 UniProt: 205-258             -------------------------------------Exon 1.12  PDB: D:296-341 UniProt: 296-341    -------------------------------------------------------------------------Exon 1.17          ----------------------------------------Exon 1.20        --------------------------------Exon 1.22a              ----------------------------------------------------------------Exon 1.24          ---------------------------------Exon 1.26a            ------------------------Exon 1.28  PDB: D:709-733--------------------------------- Transcript 1 (2)
                 3ccb D  41 KTYTLTDYLKNTYRLKLYSLRWISDHEYLYKQ--NILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLITEERIPNNTQWVTWSPVGHKLAYVWNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDCTFITKGTWEVIGIEALTSDYLYYISNEYKGMPGGRNLYKIQLSDYTKVTCLSCELNPERCQYYSVSFSKEAKYYQLRCSGPGLPLYTLHSSVNDKGLRVLEDNSALDKMLQNVQMPSKKLDFIILNETKFWYQMILPPHFDKSKKYPLLLDVYAGPCSQKADTVFRLNWATYLASTENIIVASFDGRGSGYQGDKIMHAINRRLGTFEVEDQIEAARQFSKMGFVDNKRIAIWGWSYGGYVTSMVLGSGSGVFKCGIAVAPVSRWEYYDSVYTERYMGLPTPEDNLDHYRNSTVMSRAENFKQVEYLLIHGTADDNVHFQQSAQISKALVDVGVDFQAMWYTDEDHGIASSTAHQHIYTHMSHFIKQCFSLP 766
                                    50        60        70 |  |   80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550       560       570       580       590       600       610       620       630       640       650       660       670       680       690       700       710       720       730       740       750       760      
                                                          72 75                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   

   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (2, 8)

Asymmetric Unit

(-) CATH Domains  (2, 8)

Asymmetric Unit
(-)
Class: Alpha Beta (26913)
(-)
Class: Mainly Beta (13760)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 3CCB)

(-) Gene Ontology  (42, 42)

Asymmetric Unit(hide GO term definitions)
Chain A,B,C,D   (DPP4_HUMAN | P27487)
molecular function
    GO:0004177    aminopeptidase activity    Catalysis of the hydrolysis of N-terminal amino acid residues from in a polypeptide chain.
    GO:0008239    dipeptidyl-peptidase activity    Catalysis of the hydrolysis of N-terminal dipeptides from a polypeptide chain.
    GO:0016787    hydrolase activity    Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
    GO:0042802    identical protein binding    Interacting selectively and non-covalently with an identical protein or proteins.
    GO:0008233    peptidase activity    Catalysis of the hydrolysis of a peptide bond. A peptide bond is a covalent bond formed when the carbon atom from the carboxyl group of one amino acid shares electrons with the nitrogen atom from the amino group of a second amino acid.
    GO:0002020    protease binding    Interacting selectively and non-covalently with any protease or peptidase.
    GO:0005515    protein binding    Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
    GO:0042803    protein homodimerization activity    Interacting selectively and non-covalently with an identical protein to form a homodimer.
    GO:0005102    receptor binding    Interacting selectively and non-covalently with one or more specific sites on a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function.
    GO:0004252    serine-type endopeptidase activity    Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine).
    GO:0008236    serine-type peptidase activity    Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine).
    GO:0001618    virus receptor activity    Combining with a virus component and mediating entry of the virus into the cell.
biological process
    GO:0042110    T cell activation    The change in morphology and behavior of a mature or immature T cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific.
    GO:0031295    T cell costimulation    The process of providing, via surface-bound receptor-ligand pairs, a second, antigen-independent, signal in addition to that provided by the T cell receptor to augment T cell activation.
    GO:0001662    behavioral fear response    An acute behavioral change resulting from a perceived external threat.
    GO:0007155    cell adhesion    The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules.
    GO:0043542    endothelial cell migration    The orderly movement of an endothelial cell into the extracellular matrix to form an endothelium.
    GO:0035641    locomotory exploration behavior    The specific movement from place to place of an organism in response to a novel environment.
    GO:0010716    negative regulation of extracellular matrix disassembly    Any process that decreases the rate, frequency or extent of extracellular matrix disassembly. Extracellular matrix disassembly is a process that results in the breakdown of the extracellular matrix.
    GO:0008284    positive regulation of cell proliferation    Any process that activates or increases the rate or extent of cell proliferation.
    GO:0006508    proteolysis    The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.
    GO:0036343    psychomotor behavior    The specific behavior of an organism that combines cognitive functions and physical movement. For example, driving a car, throwing a ball, or playing a musical instrument.
    GO:0033632    regulation of cell-cell adhesion mediated by integrin    Any process that modulates the frequency, rate, or extent of cell-cell adhesion mediated by integrin.
    GO:0001666    response to hypoxia    Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level.
    GO:0046718    viral entry into host cell    The process that occurs after viral attachment by which a virus, or viral nucleic acid, breaches the plasma membrane or cell envelope and enters the host cell. The process ends when the viral nucleic acid is released into the host cell cytoplasm.
cellular component
    GO:0016324    apical plasma membrane    The region of the plasma membrane located at the apical end of the cell.
    GO:0030054    cell junction    A cellular component that forms a specialized region of connection between two or more cells or between a cell and the extracellular matrix. At a cell junction, anchoring proteins extend through the plasma membrane to link cytoskeletal proteins in one cell to cytoskeletal proteins in neighboring cells or to proteins in the extracellular matrix.
    GO:0042995    cell projection    A prolongation or process extending from a cell, e.g. a flagellum or axon.
    GO:0009986    cell surface    The external part of the cell wall and/or plasma membrane.
    GO:0030139    endocytic vesicle    A membrane-bounded intracellular vesicle formed by invagination of the plasma membrane around an extracellular substance. Endocytic vesicles fuse with early endosomes to deliver the cargo for further sorting.
    GO:0070062    extracellular exosome    A vesicle that is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane. Extracellular exosomes, also simply called exosomes, have a diameter of about 40-100 nm.
    GO:0005576    extracellular region    The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite.
    GO:0005925    focal adhesion    Small region on the surface of a cell that anchors the cell to the extracellular matrix and that forms a point of termination of actin filaments.
    GO:0016021    integral component of membrane    The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
    GO:0046581    intercellular canaliculus    An extremely narrow tubular channel located between adjacent cells. An instance of this is the secretory canaliculi occurring between adjacent parietal cells in the gastric mucosa of vertebrates.
    GO:0071438    invadopodium membrane    The portion of the plasma membrane surrounding an invadopodium.
    GO:0030027    lamellipodium    A thin sheetlike process extended by the leading edge of a migrating cell or extending cell process; contains a dense meshwork of actin filaments.
    GO:0031258    lamellipodium membrane    The portion of the plasma membrane surrounding a lamellipodium.
    GO:0005765    lysosomal membrane    The lipid bilayer surrounding the lysosome and separating its contents from the cell cytoplasm.
    GO:0016020    membrane    A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
    GO:0045121    membrane raft    Any of the small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes. Small rafts can sometimes be stabilized to form larger platforms through protein-protein and protein-lipid interactions.
    GO:0005886    plasma membrane    The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.

 Visualization

(-) Interactive Views

Asymmetric Unit
  Complete Structure
    Jena3D(integrated viewing of ligand, site, SAP, PROSITE, SCOP information)
    WebMol | AstexViewer[tm]@PDBe
(Java Applets, require no local installation except for Java; loading may be slow)
    STRAP
(Java WebStart application, automatic local installation, requires Java; full application with system access!)
    RasMol
(require local installation)
    Molscript (VRML)
(requires installation of a VRML viewer; select preferred view via VRML and generate a mono or stereo PDF format file)
 
  Ligands, Modified Residues, Ions
    B2Y  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    NAG  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
 
  Sites
    AC1  [ RasMol ]  +environment [ RasMol ]
    AC2  [ RasMol ]  +environment [ RasMol ]
    AC3  [ RasMol ]  +environment [ RasMol ]
    AC4  [ RasMol ]  +environment [ RasMol ]
    AC5  [ RasMol ]  +environment [ RasMol ]
    AC6  [ RasMol ]  +environment [ RasMol ]
    AC7  [ RasMol ]  +environment [ RasMol ]
    AC8  [ RasMol ]  +environment [ RasMol ]
    AC9  [ RasMol ]  +environment [ RasMol ]
    BC1  [ RasMol ]  +environment [ RasMol ]
    BC2  [ RasMol ]  +environment [ RasMol ]
    BC3  [ RasMol ]  +environment [ RasMol ]
    BC4  [ RasMol ]  +environment [ RasMol ]
    BC5  [ RasMol ]  +environment [ RasMol ]
    BC6  [ RasMol ]  +environment [ RasMol ]
    BC7  [ RasMol ]  +environment [ RasMol ]
    BC8  [ RasMol ]  +environment [ RasMol ]
    BC9  [ RasMol ]  +environment [ RasMol ]
    CC1  [ RasMol ]  +environment [ RasMol ]
    CC2  [ RasMol ]  +environment [ RasMol ]
    CC3  [ RasMol ]  +environment [ RasMol ]
 
  Cis Peptide Bonds
(no "Cis Peptide Bonds" information available for 3ccb)
 
Biological Units
  Complete Structure
    Biological Unit 1  [ Jena3D ]
    Biological Unit 2  [ Jena3D ]

(-) Still Images

Jmol
  protein: cartoon or spacefill or dots and stick; nucleic acid: cartoon and stick; ligands: spacefill; active site: stick
Molscript
  protein, nucleic acid: cartoon; ligands: spacefill; active site: ball and stick

 Databases and Analysis Tools

(-) Databases

Access by PDB/NDB ID
  3ccb
    Family and Domain InformationProDom | SYSTERS
    General Structural InformationGlycoscienceDB | MMDB | NDB | OCA | PDB | PDBe | PDBj | PDBsum | PDBWiki | PQS | PROTEOPEDIA
    Orientation in MembranesOPM
    Protein SurfaceSURFACE
    Secondary StructureDSSP (structure derived) | HSSP (homology derived)
    Structural GenomicsGeneCensus
    Structural NeighboursCE | VAST
    Structure ClassificationCATH | Dali | SCOP
    Validation and Original DataBMRB Data View | BMRB Restraints Grid | EDS | PROCHECK | RECOORD | WHAT_CHECK
 
Access by UniProt ID/Accession number
  DPP4_HUMAN | P27487
    Comparative Protein Structure ModelsModBase
    Genomic InformationEnsembl
    Protein-protein InteractionDIP
    Sequence, Family and Domain InformationInterPro | Pfam | SMART | UniProtKB/SwissProt
 
Access by Enzyme Classificator   (EC Number)
  3.4.14.5
    General Enzyme InformationBRENDA | EC-PDB | Enzyme | IntEnz
    PathwayKEGG | MetaCyc
 
Access by Disease Identifier   (MIM ID)
  (no 'MIM ID' available)
    Disease InformationOMIM
 
Access by GenAge ID
  (no 'GenAge ID' available)
    Age Related InformationGenAge

(-) Analysis Tools

Access by PDB/NDB ID
    Domain InformationXDom
    Interatomic Contacts of Structural UnitsCSU
    Ligand-protein ContactsLPC
    Protein CavitiescastP
    Sequence and Secondary StructurePDBCartoon
    Structure AlignmentSTRAP(Java WebStart application, automatic local installation, requires Java; full application with system access!)
    Structure and Sequence BrowserSTING
 
Access by UniProt ID/Accession number
  DPP4_HUMAN | P27487
    Protein Disorder PredictionDisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)

 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        DPP4_HUMAN | P274871j2e 1n1m 1nu6 1nu8 1pfq 1r9m 1r9n 1rwq 1tk3 1tkr 1u8e 1w1i 1wcy 1x70 2ajl 2bgn 2bgr 2bub 2fjp 2g5p 2g5t 2g63 2hha 2i03 2i78 2iit 2iiv 2jid 2oag 2ogz 2ole 2onc 2oph 2oqi 2oqv 2p8s 2qjr 2qky 2qoe 2qt9 2qtb 2rgu 2rip 3bjm 3c43 3c45 3ccc 3d4l 3eio 3f8s 3g0b 3g0c 3g0d 3g0g 3h0c 3hab 3hac 3kwf 3kwj 3nox 3o95 3o9v 3oc0 3opm 3q0t 3q8w 3qbj 3sww 3sx4 3vjk 3vjl 3vjm 3w2t 3wqh 4a5s 4dsa 4dsz 4dtc 4g1f 4j3j 4jh0 4kr0 4l72 4lko 4n8d 4n8e 4pnz 4pv7 4qzv 5i7u 5ism 5j3j 5kby 5t4b 5t4e 5t4f 5t4h

(-) Related Entries Specified in the PDB File

3ccc