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(-) Description

Title :  CRYSTAL STRUCTURE OF STEROL CARRIER PROTEIN-2 LIKE-3 (SCP2-L3) FROM AEDES AEGYPTI
 
Authors :  D. H. Dyer, Q. Lan, K. T. Forest
Date :  07 Dec 07  (Deposition) - 09 Dec 08  (Release) - 26 May 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.40
Chains :  Asym./Biol. Unit :  A
Keywords :  Sterol Carrier, Mosquito, Fatty Acid, Palmitic Acid, Cholesterol, Lipid Binding Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  D. H. Dyer, I. Vyazunova, J. M. Lorch, K. T. Forest, Q. Lan
Characterization Of The Yellow Fever Mosquito Sterol Carrier Protein-2 Like 3 Gene And Ligand-Bound Protein Structure.
Mol. Cell. Biochem. V. 326 67 2009
PubMed-ID: 19130179  |  Reference-DOI: 10.1007/S11010-008-0007-Z
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - STEROL CARRIER PROTEIN-2 LIKE-3
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PGEX-4T-2
    Expression System Strain: BL21
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Gene: AAEL_AAEL012704
    Organism Common: YELLOWFEVER MOSQUITO
    Organism Scientific: AEDES AEGYPTI
    Organism Taxid: 7159

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 1)

Asymmetric/Biological Unit (1, 1)
No.NameCountTypeFull Name
1PLM1Ligand/IonPALMITIC ACID

(-) Sites  (1, 1)

Asymmetric Unit (1, 1)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREARG A:24 , SER A:25 , PHE A:26 , PHE A:48 , HOH A:397BINDING SITE FOR RESIDUE PLM A 300

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 3BKR)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 3BKR)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

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(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 3BKR)

(-) Exons   (0, 0)

(no "Exon" information available for 3BKR)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:119
 aligned with Q16LC3_AEDAE | Q16LC3 from UniProtKB/TrEMBL  Length:120

    Alignment length:119
                                    11        21        31        41        51        61        71        81        91       101       111         
         Q16LC3_AEDAE     2 ALKTDQILDKLNEKLAQVDRSKRSFTVILFVHLRQEGKVVRSVVLDFNDLKISEIELAVTSTADYPAERIDASITIDDNDFYLVATKETSFAALIEQGKVDITGNKQAFITLDEKFRNK 120
               SCOP domains d3bkra_ A: automated matches                                                                                            SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhh.........eeeeeeee..eeeeeeeee....eeeee..........hhhhh.eeeeeehhhhhhhhh...hhhhhhhh...eeeehhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------- Transcript
                 3bkr A   2 ALKTDQILDKLNEKLAQVDRSKRSFTVILFVHLRQEGKVVRSVVLDFNDLKISEIELAVTSTADYPAERIDASITIDDNDFYLVATKETSFAALIEQGKVDITGNKQAFLTLDEKFRNK 120
                                    11        21        31        41        51        61        71        81        91       101       111
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 1)

Asymmetric/Biological Unit
(-)
Class: Alpha and beta proteins (a+b) (23004)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 3BKR)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 3BKR)

(-) Gene Ontology  (0, 0)

Asymmetric/Biological Unit(hide GO term definitions)
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/TrEMBL
        Q16LC3_AEDAE | Q16LC3: 3bks

(-) Related Entries Specified in the PDB File

1pz4 MOSQUITO SCP2
2qzt MOSQUITO SCP2-LIKE2 CRYO-COOLED
3bdq MOSQUITO SCP2-LIKE2 ROOM TEMPERATURE
3bks MOSQUITO SCP2-LIKE3 ROOM TEMPERATURE