3BB1 - JenaLib

Asymmetric Unit (Jmol Viewer)

Asym. Unit - sites (Jmol Viewer)

Biological Unit 1 (Jmol Viewer)

Biol. Unit 1 - sites (Jmol Viewer)

Biological Unit 2 (Jmol Viewer)

Biological Unit 3 (Jmol Viewer)

Biological Unit 4 (Jmol Viewer)

Title :   CRYSTAL STRUCTURE OF TOC34 FROM PISUM SATIVUM IN COMPLEX WITH MG2+ AND GMPPNP

Authors :   P. Koenig, I. Sinning, E. Schleiff, I. Tews

Date :   09 Nov 07 (Deposition) - 01 Apr 08 (Release) - 12 Nov 14 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   2.80

Chains :   Asym. Unit : A,B,C,D,E,F,G,H
Biol. Unit 1: A,B  (1x)
Biol. Unit 2: C,D  (1x)
Biol. Unit 3: E,F  (1x)
Biol. Unit 4: G,H  (1x)

Keywords :   Rossmann Fold, Gtpase Domain, Chloroplast Import, Gtp-Binding, Hydrolase, Membrane, Nucleotide-Binding, Outer Membrane, Protein Transport, Transmembrane, Transport (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   P. Koenig, M. Oreb, A. Hofle, S. Kaltofen, K. Rippe, I. Sinning, E. Schleiff, I. Tews
The Gtpase Cycle Of The Chloroplast Import Receptors Toc33/Toc34: Implications From Monomeric And Dimeric Structures.
Structure V. 16 585 2008
PubMed-ID: 18400179 | Reference-DOI: 10.1016/J.STR.2008.01.008

Molecule 1 - TRANSLOCASE OF CHLOROPLAST 34
	Chains	:	A, B, C, D, E, F, G, H
	EC Number	:	3.6.5.-
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI BL21(DE3)
	Expression System Plasmid	:	PET21D
	Expression System Strain	:	BL21(DE3)
	Expression System Taxid	:	469008
	Expression System Vector Type	:	PLASMID
	Fragment	:	UNP RESIDUES 1-266
	Gene	:	TOC34
	Mutation	:	YES
	Organism Common	:	PEA
	Organism Scientific	:	PISUM SATIVUM
	Organism Taxid	:	3888
	Synonym	:	PSTOC34, 34 KDA CHLOROPLAST OUTER ENVELOPE PROTEIN, GTP- BINDING PROTEIN OEP34, GTP-BINDING PROTEIN IAP34

		1	2	3	4	5	6	7	8
Asymmetric Unit	:	A	B	C	D	E	F	G	H
Biological Unit 1 (1x)	:	A	B
Biological Unit 2 (1x)	:			C	D
Biological Unit 3 (1x)	:					E	F
Biological Unit 4 (1x)	:							G	H

Summary Information (see also Sequences/Alignments below)

Asymmetric Unit (4, 24)

No.	Name	Count	Type	Full Name
1	GNP	8	Ligand/Ion	PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER
2	GOL	6	Ligand/Ion	GLYCEROL
3	MG	8	Ligand/Ion	MAGNESIUM ION
4	PGE	2	Ligand/Ion	TRIETHYLENE GLYCOL

Biological Unit 1 (3, 4)

No.	Name	Count	Type	Full Name
1	GNP	2	Ligand/Ion	PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER
2	GOL	1	Ligand/Ion	GLYCEROL
3	MG	-1	Ligand/Ion	MAGNESIUM ION
4	PGE	1	Ligand/Ion	TRIETHYLENE GLYCOL

Biological Unit 2 (2, 3)

No.	Name	Count	Type	Full Name
1	GNP	2	Ligand/Ion	PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER
2	GOL	1	Ligand/Ion	GLYCEROL
3	MG	-1	Ligand/Ion	MAGNESIUM ION
4	PGE	-1	Ligand/Ion	TRIETHYLENE GLYCOL

Biological Unit 3 (3, 5)

No.	Name	Count	Type	Full Name
1	GNP	2	Ligand/Ion	PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER
2	GOL	2	Ligand/Ion	GLYCEROL
3	MG	-1	Ligand/Ion	MAGNESIUM ION
4	PGE	1	Ligand/Ion	TRIETHYLENE GLYCOL

Biological Unit 4 (2, 4)

No.	Name	Count	Type	Full Name
1	GNP	2	Ligand/Ion	PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER
2	GOL	2	Ligand/Ion	GLYCEROL
3	MG	-1	Ligand/Ion	MAGNESIUM ION
4	PGE	-1	Ligand/Ion	TRIETHYLENE GLYCOL

Asymmetric Unit (24, 24)

No.	Name	Evidence	Residues	Description
01	AC1	SOFTWARE	SER A:53 , HOH A:292 , HOH A:293 , HOH A:294	BINDING SITE FOR RESIDUE MG A 282
02	AC2	SOFTWARE	SER B:53 , HOH B:283 , HOH B:284 , HOH B:285	BINDING SITE FOR RESIDUE MG B 282
03	AC3	SOFTWARE	SER C:53 , HOH C:292 , HOH C:293 , HOH C:294	BINDING SITE FOR RESIDUE MG C 282
04	AC4	SOFTWARE	SER D:53 , HOH D:283 , HOH D:284 , HOH D:285	BINDING SITE FOR RESIDUE MG D 282
05	AC5	SOFTWARE	SER E:53 , HOH E:291 , HOH E:292 , HOH E:293	BINDING SITE FOR RESIDUE MG E 282
06	AC6	SOFTWARE	SER F:53 , HOH F:292 , HOH F:293 , HOH F:294	BINDING SITE FOR RESIDUE MG F 282
07	AC7	SOFTWARE	SER G:53 , HOH G:292 , HOH G:293 , HOH G:294	BINDING SITE FOR RESIDUE MG G 282
08	AC8	SOFTWARE	SER H:53 , ASP H:93 , HOH H:283 , HOH H:284 , HOH H:285	BINDING SITE FOR RESIDUE MG H 282
09	AC9	SOFTWARE	GLY A:48 , GLY A:49 , GLY A:51 , LYS A:52 , SER A:53 , SER A:54 , SER A:68 , PRO A:69 , SER A:72 , GLY A:96 , HIS A:163 , GLU A:210 , ASN A:211 , HOH A:292 , HOH A:293 , HOH A:294 , HOH A:302 , TYR B:132 , ARG B:133 , PRO B:169 , ASP B:170	BINDING SITE FOR RESIDUE GNP A 281
10	BC1	SOFTWARE	PHE A:17 , SER A:54 , ASN A:57 , SER A:58 , GLY A:61 , GLU A:62 , ARG A:63 , ILE A:67	BINDING SITE FOR RESIDUE PGE A 290
11	BC2	SOFTWARE	TYR A:132 , ARG A:133 , PRO A:169 , GLY B:48 , GLY B:49 , GLY B:51 , LYS B:52 , SER B:53 , SER B:54 , ILE B:67 , PRO B:69 , SER B:72 , THR B:162 , HIS B:163 , ILE B:209 , GLU B:210 , ASN B:211 , HOH B:283 , HOH B:284 , HOH B:285	BINDING SITE FOR RESIDUE GNP B 281
12	BC3	SOFTWARE	GLY C:48 , GLY C:49 , GLY C:51 , LYS C:52 , SER C:53 , SER C:54 , ILE C:67 , SER C:68 , PRO C:69 , SER C:72 , GLY C:96 , HIS C:163 , GLU C:210 , ASN C:211 , ARG C:214 , HOH C:292 , HOH C:293 , HOH C:294 , TYR D:132 , ARG D:133 , PRO D:169 , ASP D:170	BINDING SITE FOR RESIDUE GNP C 281
13	BC4	SOFTWARE	TYR C:132 , ARG C:133 , PRO C:169 , GLY D:48 , GLY D:49 , GLY D:51 , LYS D:52 , SER D:53 , SER D:54 , ILE D:67 , SER D:68 , PRO D:69 , SER D:72 , GLY D:96 , THR D:162 , HIS D:163 , GLU D:210 , ASN D:211 , HOH D:283 , HOH D:284 , HOH D:285	BINDING SITE FOR RESIDUE GNP D 281
14	BC5	SOFTWARE	GLY E:48 , GLY E:49 , GLY E:51 , LYS E:52 , SER E:53 , SER E:54 , ILE E:67 , SER E:68 , PRO E:69 , THR E:162 , HIS E:163 , GLU E:210 , ASN E:211 , HOH E:291 , HOH E:292 , HOH E:293 , HOH E:302 , TYR F:132 , ARG F:133 , PRO F:169 , ASP F:170 , HOH F:317	BINDING SITE FOR RESIDUE GNP E 281
15	BC6	SOFTWARE	TYR E:132 , ARG E:133 , PRO E:169 , GLY F:48 , GLY F:49 , GLY F:51 , LYS F:52 , SER F:53 , SER F:54 , ILE F:67 , SER F:68 , PRO F:69 , SER F:72 , HIS F:163 , GLU F:210 , ASN F:211 , HOH F:292 , HOH F:293 , HOH F:294	BINDING SITE FOR RESIDUE GNP F 281
16	BC7	SOFTWARE	THR F:16 , PHE F:17 , ALA F:18 , ASN F:57 , SER F:58 , LYS F:223 , HOH F:325 , HOH F:326	BINDING SITE FOR RESIDUE PGE F 290
17	BC8	SOFTWARE	GLY G:48 , GLY G:49 , GLY G:51 , LYS G:52 , SER G:53 , SER G:54 , ILE G:67 , SER G:68 , PRO G:69 , GLY G:96 , HIS G:163 , GLU G:210 , ASN G:211 , HOH G:292 , HOH G:293 , HOH G:294 , TYR H:132 , ARG H:133 , PRO H:169 , ASP H:170	BINDING SITE FOR RESIDUE GNP G 281
18	BC9	SOFTWARE	TYR G:132 , ARG G:133 , PRO G:169 , GLY H:48 , GLY H:49 , GLY H:51 , LYS H:52 , SER H:53 , SER H:54 , ILE H:67 , PRO H:69 , HIS H:163 , GLU H:210 , ASN H:211 , HOH H:283 , HOH H:284 , HOH H:285	BINDING SITE FOR RESIDUE GNP H 281
19	CC1	SOFTWARE	LEU A:208 , ASN A:227 , ILE A:229 , HIS A:234	BINDING SITE FOR RESIDUE GOL A 291
20	CC2	SOFTWARE	LYS C:151 , SER C:194 , ASN F:136 , LYS F:139	BINDING SITE FOR RESIDUE GOL F 291
21	CC3	SOFTWARE	LEU C:208 , LEU C:225 , ASN C:227 , ILE C:229 , HIS C:234	BINDING SITE FOR RESIDUE GOL C 291
22	CC4	SOFTWARE	LEU E:208 , LEU E:225 , ASN E:227 , ILE E:229 , HIS E:234 , HOH E:297	BINDING SITE FOR RESIDUE GOL E 290
23	CC5	SOFTWARE	GLU G:27 , ASN G:31 , GLN G:237 , HOH G:331	BINDING SITE FOR RESIDUE GOL G 290
24	CC6	SOFTWARE	PHE G:178 , LEU G:208 , ASN G:227 , ILE G:229 , HIS G:234	BINDING SITE FOR RESIDUE GOL G 291

(no "SS Bond" information available for 3BB1)

Asymmetric Unit

No.	Residues
1	Ser A:202	-	Asp A:203
2	Ala B:201	-	Ser B:202
3	Asp B:203	-	Ile B:204
4	Ser B:212	-	Gly B:213
5	Ser B:220	-	Asp B:221
6	Lys B:246	-	Ser B:247
7	Ser B:247	-	Glu B:248
8	Ser C:72	-	Glu C:73
9	Glu C:73	-	Gly C:74
10	Glu D:35	-	Asp D:36
11	Val D:37	-	Asn D:38
12	Gly D:74	-	Pro D:75
13	Ala D:193	-	Ser D:194
14	Asp D:198	-	Ala D:199
15	Ser D:202	-	Asp D:203
16	Asp D:203	-	Ile D:204
17	Gly E:74	-	Pro E:75
18	Ser E:202	-	Asp E:203
19	Glu F:73	-	Gly F:74
20	Glu F:99	-	Gly F:100
21	Gly F:100	-	Gly F:101
22	Asp F:170	-	Gly F:171
23	Ala F:193	-	Ser F:194
24	Asn F:245	-	Lys F:246
25	Arg G:9	-	Gly G:10
26	Ser G:202	-	Asp G:203
27	Gly H:10	-	Trp H:11
28	Gly H:74	-	Pro H:75
29	Asp H:203	-	Ile H:204

(no "SAP(SNP)/Variant" information available for 3BB1)

Asymmetric Unit (1, 8)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	G_AIG1	PS51720	AIG1-type G domain profile.	TOC34_PEA	37-261	8	A:37-258 B:37-259 C:37-258 D:37-258 E:37-258 F:37-257 G:37-258 H:37-258

Biological Unit 1 (1, 2)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	G_AIG1	PS51720	AIG1-type G domain profile.	TOC34_PEA	37-261	2	A:37-258 B:37-259 - - - - - -

Biological Unit 2 (1, 2)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	G_AIG1	PS51720	AIG1-type G domain profile.	TOC34_PEA	37-261	2	- - C:37-258 D:37-258 - - - -

Biological Unit 3 (1, 2)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	G_AIG1	PS51720	AIG1-type G domain profile.	TOC34_PEA	37-261	2	- - - - E:37-258 F:37-257 - -

Biological Unit 4 (1, 2)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	G_AIG1	PS51720	AIG1-type G domain profile.	TOC34_PEA	37-261	2	- - - - - - G:37-258 H:37-258

(no "Exon" information available for 3BB1)

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:252
 aligned with TOC34_PEA | Q41009 from UniProtKB/Swiss-Prot  Length:310

    Alignment length:257
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       
            TOC34_PEA     2 ASQQQTVREWSGINTFAPATQTKLLELLGNLKQEDVNSLTILVMGKGGVGKSSTVNSIIGERVVSISPFQSEGPRPVMVSRSRAGFTLNIIDTPGLIEGGYINDMALNIIKSFLLDKTIDVLLYVDRLDAYRVDNLDKLVAKAITDSFGKGIWNKAIVALTHAQFSPPDGLPYDEFFSKRSEALLQVVRSGASLKKDAQASDIPVVLIENSGRCNKNDSDEKVLPNGIAWIPHLVQTITEVALNKSESIFVDKNLID 258
               SCOP domains d3bb1a_ A: automated matches                                                                                                                                                                                                                                      SCOP domains
               CATH domains 3bb1A00 A:2-258 P-loop containing nucleotide triphosphate hydrolases                                                                                                                                                                                              CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..........hhhhhh.hhhhhhhhhhhhhhhhh...eeeeeeee....hhhhhhhhhhh................eeeeeee..eeeeeee..........hhhhhhhhhhhh..eee.eeeeeee......hhhhhhhhhhhhhhh.hhhhh.eeeeee..........hhhhhhhhhhhhhhhhhhhhhh..-----....eee.....................hhhhhhhhhhhhhhh.....eeehhhhhh Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -----------------------------------G_AIG1  PDB: A:37-258 UniProt: 37-261                                                                                                                                                                                          PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3bb1 A   2 ASQQQTVRGWSGINTFAPATQTKLLELLGNLKQEDVNSLTILVMGKGGVGKSSTVNSIIGERVVSISPFQSEGPRPVMVSRSRAGFTLNIIDTPGLIEGGYINDMALNIIKSFLLDKTIDVLLYVDRLDAYRVDNLDKLVAKAITDSFGKGIWNKAIVALTHAQFSPPDGLPYDEFFSKRSEALLQVVRSGASLK-----SDIPVVLIENSGRCNKNDSDEKVLPNGIAWIPHLVQTITEVALNKSESIFVDKNLID 258
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191    |    -|      211       221       231       241       251       
                                                                                                                                                                                                                            196   202

Chain B from PDB  Type:PROTEIN  Length:243
 aligned with TOC34_PEA | Q41009 from UniProtKB/Swiss-Prot  Length:310

    Alignment length:252
                                    17        27        37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257  
            TOC34_PEA     8 VREWSGINTFAPATQTKLLELLGNLKQEDVNSLTILVMGKGGVGKSSTVNSIIGERVVSISPFQSEGPRPVMVSRSRAGFTLNIIDTPGLIEGGYINDMALNIIKSFLLDKTIDVLLYVDRLDAYRVDNLDKLVAKAITDSFGKGIWNKAIVALTHAQFSPPDGLPYDEFFSKRSEALLQVVRSGASLKKDAQASDIPVVLIENSGRCNKNDSDEKVLPNGIAWIPHLVQTITEVALNKSESIFVDKNLIDG 259
               SCOP domains d3bb1b_ B: automated matches                                                                                                                                                                                                                                 SCOP domains
               CATH domains 3bb1B00 B:8-259 P-loop containing nucleotide triphosphate hydrola ses                                                                                                                                                                                        CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ....hhhhhh.hhhhhhhhhhhhhhhhh...eeeeeeee....hhhhhhhhhhh...........-....eeeeeee..eeeeeee..........hhhhhhhhhhhh..eee.eeeeeee......hhhhhhhhhhhhhhh.hhhhh.eeeeee..........hhhhhhhhhhhhhhhhhhhhhh.-----.....eee........---..........hhhhhhhhhhhhhhh.....eeehhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE -----------------------------G_AIG1  PDB: B:37-259 UniProt: 37-261                                                                                                                                                                                           PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3bb1 B   8 VRGWSGINTFAPATQTKLLELLGNLKQEDVNSLTILVMGKGGVGKSSTVNSIIGERVVSISPFQS-GPRPVMVSRSRAGFTLNIIDTPGLIEGGYINDMALNIIKSFLLDKTIDVLLYVDRLDAYRVDNLDKLVAKAITDSFGKGIWNKAIVALTHAQFSPPDGLPYDEFFSKRSEALLQVVRSGASL-----ASDIPVVLIENSGRCN---SDEKVLPNGIAWIPHLVQTITEVALNKSESIFVDKNLIDG 259
                                    17        27        37        47        57        67    | | 77        87        97       107       117       127       137       147       157       167       177       187       | -   |   207        |-  |    227       237       247       257  
                                                                                           72 |                                                                                                                      195   201            216 220                                       
                                                                                             74

Chain C from PDB  Type:PROTEIN  Length:246
 aligned with TOC34_PEA | Q41009 from UniProtKB/Swiss-Prot  Length:310

    Alignment length:251
                                    17        27        37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257 
            TOC34_PEA     8 VREWSGINTFAPATQTKLLELLGNLKQEDVNSLTILVMGKGGVGKSSTVNSIIGERVVSISPFQSEGPRPVMVSRSRAGFTLNIIDTPGLIEGGYINDMALNIIKSFLLDKTIDVLLYVDRLDAYRVDNLDKLVAKAITDSFGKGIWNKAIVALTHAQFSPPDGLPYDEFFSKRSEALLQVVRSGASLKKDAQASDIPVVLIENSGRCNKNDSDEKVLPNGIAWIPHLVQTITEVALNKSESIFVDKNLID 258
               SCOP domains d3bb1c_ C: automated matches                                                                                                                                                                                                                                SCOP domains
               CATH domains 3bb1C00 C:8-258 P-loop containing nucleotide triphosphate hydrolases                                                                                                                                                                                        CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhh.hhhhhhhhhhhhhhhhh...eeeeeeee....hhhhhhhhhhh................eeeeeee..eeeeeee..........hhhhhhhhhhhh..eee.eeeeeee......hhhhhhhhhhhhhhh.hhhhh.eeeeee..........hhhhhhhhhhhhhhhhhhhhhh..-----....eee.....................hhhhhhhhhhhhhhh.....eeehhhhhh Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -----------------------------G_AIG1  PDB: C:37-258 UniProt: 37-261                                                                                                                                                                                          PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3bb1 C   8 VRGWSGINTFAPATQTKLLELLGNLKQEDVNSLTILVMGKGGVGKSSTVNSIIGERVVSISPFQSEGPRPVMVSRSRAGFTLNIIDTPGLIEGGYINDMALNIIKSFLLDKTIDVLLYVDRLDAYRVDNLDKLVAKAITDSFGKGIWNKAIVALTHAQFSPPDGLPYDEFFSKRSEALLQVVRSGASLK-----SDIPVVLIENSGRCNKNDSDEKVLPNGIAWIPHLVQTITEVALNKSESIFVDKNLID 258
                                    17        27        37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187        |-    |  207       217       227       237       247       257 
                                                                                                                                                                                                                      196   202

Chain D from PDB  Type:PROTEIN  Length:247
 aligned with TOC34_PEA | Q41009 from UniProtKB/Swiss-Prot  Length:310

    Alignment length:252
                                    16        26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256  
            TOC34_PEA     7 TVREWSGINTFAPATQTKLLELLGNLKQEDVNSLTILVMGKGGVGKSSTVNSIIGERVVSISPFQSEGPRPVMVSRSRAGFTLNIIDTPGLIEGGYINDMALNIIKSFLLDKTIDVLLYVDRLDAYRVDNLDKLVAKAITDSFGKGIWNKAIVALTHAQFSPPDGLPYDEFFSKRSEALLQVVRSGASLKKDAQASDIPVVLIENSGRCNKNDSDEKVLPNGIAWIPHLVQTITEVALNKSESIFVDKNLID 258
               SCOP domains d3bb1d_ D: automated matches                                                                                                                                                                                                                                 SCOP domains
               CATH domains 3bb1D00 D:7-258 P-loop containing nucleotide triphosphate hydrolases                                                                                                                                                                                         CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .....hhhhhh.hhhhhhhhhhhhhhhhh...eeeeeeee....hhhhhhhhhhh................eeeeeee..eeeeeee..........hhhhhhhhhhhh..eee.eeeeeee......hhhhhhhhhhhhhhh.hhhhh.eeeeee..........hhhhhhhhhhhhhhhhhhhhhh.....-.....eee........----.........hhhhhhhhhhhhhhh.....eeehhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------G_AIG1  PDB: D:37-258 UniProt: 37-261                                                                                                                                                                                          PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3bb1 D   7 TVRGWSGINTFAPATQTKLLELLGNLKQEDVNSLTILVMGKGGVGKSSTVNSIIGERVVSISPFQSEGPRPVMVSRSRAGFTLNIIDTPGLIEGGYINDMALNIIKSFLLDKTIDVLLYVDRLDAYRVDNLDKLVAKAITDSFGKGIWNKAIVALTHAQFSPPDGLPYDEFFSKRSEALLQVVRSGASLKKDA-ASDIPVVLIENSGRCN----DEKVLPNGIAWIPHLVQTITEVALNKSESIFVDKNLID 258
                                    16        26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196  | |  206       216    |  226       236       246       256  
                                                                                                                                                                                                                          199 |            216  221                                     
                                                                                                                                                                                                                            201

Chain E from PDB  Type:PROTEIN  Length:248
 aligned with TOC34_PEA | Q41009 from UniProtKB/Swiss-Prot  Length:310

    Alignment length:251
                                    17        27        37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257 
            TOC34_PEA     8 VREWSGINTFAPATQTKLLELLGNLKQEDVNSLTILVMGKGGVGKSSTVNSIIGERVVSISPFQSEGPRPVMVSRSRAGFTLNIIDTPGLIEGGYINDMALNIIKSFLLDKTIDVLLYVDRLDAYRVDNLDKLVAKAITDSFGKGIWNKAIVALTHAQFSPPDGLPYDEFFSKRSEALLQVVRSGASLKKDAQASDIPVVLIENSGRCNKNDSDEKVLPNGIAWIPHLVQTITEVALNKSESIFVDKNLID 258
               SCOP domains d3bb1e_ E: automated matches                                                                                                                                                                                                                                SCOP domains
               CATH domains 3bb1E00 E:8-258 P-loop containing nucleotide triphosphate hydrolases                                                                                                                                                                                        CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhh.hhhhhhhhhhhhhhhhh...eeeeeeee....hhhhhhhhhhh................eeeeeee..eeeeeee..........hhhhhhhhhhhh..eee.eeeeeee......hhhhhhhhhhhhhhh.hhhhh.eeeeee..........hhhhhhhhhhhhhhhhhhhhhh...---.....eee.....................hhhhhhhhhhhhhhh.....eeehhhhhh Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -----------------------------G_AIG1  PDB: E:37-258 UniProt: 37-261                                                                                                                                                                                          PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3bb1 E   8 VRGWSGINTFAPATQTKLLELLGNLKQEDVNSLTILVMGKGGVGKSSTVNSIIGERVVSISPFQSEGPRPVMVSRSRAGFTLNIIDTPGLIEGGYINDMALNIIKSFLLDKTIDVLLYVDRLDAYRVDNLDKLVAKAITDSFGKGIWNKAIVALTHAQFSPPDGLPYDEFFSKRSEALLQVVRSGASLKK---ASDIPVVLIENSGRCNKNDSDEKVLPNGIAWIPHLVQTITEVALNKSESIFVDKNLID 258
                                    17        27        37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197   |   207       217       227       237       247       257 
                                                                                                                                                                                                                       197 201

Chain F from PDB  Type:PROTEIN  Length:245
 aligned with TOC34_PEA | Q41009 from UniProtKB/Swiss-Prot  Length:310

    Alignment length:250
                                    17        27        37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257
            TOC34_PEA     8 VREWSGINTFAPATQTKLLELLGNLKQEDVNSLTILVMGKGGVGKSSTVNSIIGERVVSISPFQSEGPRPVMVSRSRAGFTLNIIDTPGLIEGGYINDMALNIIKSFLLDKTIDVLLYVDRLDAYRVDNLDKLVAKAITDSFGKGIWNKAIVALTHAQFSPPDGLPYDEFFSKRSEALLQVVRSGASLKKDAQASDIPVVLIENSGRCNKNDSDEKVLPNGIAWIPHLVQTITEVALNKSESIFVDKNLI 257
               SCOP domains d3bb1f_ F: automated matches                                                                                                                                                                                                                               SCOP domains
               CATH domains 3bb1F00 F:8-257 P-loop containing nucleotide triphosphate hydrolases                                                                                                                                                                                       CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhh.hhhhhhhhhhhhhhhhh...eeeeeeee....hhhhhhhhhhh................eeeeeee..eeeeeee..........hhhhhhhhhhhh..eee.eeeeeee......hhhhhhhhhhhhhhh.hhhhh.eeeeee..........hhhhhhhhhhhhhhhhhhhhhh...-----...eee.....................hhhhhhhhhhhhhhh.....eeehhhhh Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -----------------------------G_AIG1  PDB: F:37-257 UniProt: 37-261                                                                                                                                                                                         PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3bb1 F   8 VRGWSGINTFAPATQTKLLELLGNLKQEDVNSLTILVMGKGGVGKSSTVNSIIGERVVSISPFQSEGPRPVMVSRSRAGFTLNIIDTPGLIEGGYINDMALNIIKSFLLDKTIDVLLYVDRLDAYRVDNLDKLVAKAITDSFGKGIWNKAIVALTHAQFSPPDGLPYDEFFSKRSEALLQVVRSGASLKK-----DIPVVLIENSGRCNKNDSDEKVLPNGIAWIPHLVQTITEVALNKSESIFVDKNLI 257
                                    17        27        37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197     | 207       217       227       237       247       257
                                                                                                                                                                                                                       197   203

Chain G from PDB  Type:PROTEIN  Length:251
 aligned with TOC34_PEA | Q41009 from UniProtKB/Swiss-Prot  Length:310

    Alignment length:257
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       
            TOC34_PEA     2 ASQQQTVREWSGINTFAPATQTKLLELLGNLKQEDVNSLTILVMGKGGVGKSSTVNSIIGERVVSISPFQSEGPRPVMVSRSRAGFTLNIIDTPGLIEGGYINDMALNIIKSFLLDKTIDVLLYVDRLDAYRVDNLDKLVAKAITDSFGKGIWNKAIVALTHAQFSPPDGLPYDEFFSKRSEALLQVVRSGASLKKDAQASDIPVVLIENSGRCNKNDSDEKVLPNGIAWIPHLVQTITEVALNKSESIFVDKNLID 258
               SCOP domains d3bb1g_ G: automated matches                                                                                                                                                                                                                                      SCOP domains
               CATH domains 3bb1G00 G:2-258 P-loop containing nucleotide triphosphate hydrolases                                                                                                                                                                                              CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..........hhhhhh.hhhhhhhhhhhhhhhhh...eeeeeeee....hhhhhhhhhhh................eeeeeee..eeeeeee..........hhhhhhhhhhhh..eee.eeeeeee......hhhhhhhhhhhhhhh.hhhhh.eeeeee..........hhhhhhhhhhhhhhhhhhhhhh.------....eee.....................hhhhhhhhhhhhhhh.....eeehhhhhh Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -----------------------------------G_AIG1  PDB: G:37-258 UniProt: 37-261                                                                                                                                                                                          PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3bb1 G   2 ASQQQTVRGWSGINTFAPATQTKLLELLGNLKQEDVNSLTILVMGKGGVGKSSTVNSIIGERVVSISPFQSEGPRPVMVSRSRAGFTLNIIDTPGLIEGGYINDMALNIIKSFLLDKTIDVLLYVDRLDAYRVDNLDKLVAKAITDSFGKGIWNKAIVALTHAQFSPPDGLPYDEFFSKRSEALLQVVRSGASL------SDIPVVLIENSGRCNKNDSDEKVLPNGIAWIPHLVQTITEVALNKSESIFVDKNLID 258
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191   |     -|      211       221       231       241       251       
                                                                                                                                                                                                                           195    202

Chain H from PDB  Type:PROTEIN  Length:248
 aligned with TOC34_PEA | Q41009 from UniProtKB/Swiss-Prot  Length:310

    Alignment length:251
                                    17        27        37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257 
            TOC34_PEA     8 VREWSGINTFAPATQTKLLELLGNLKQEDVNSLTILVMGKGGVGKSSTVNSIIGERVVSISPFQSEGPRPVMVSRSRAGFTLNIIDTPGLIEGGYINDMALNIIKSFLLDKTIDVLLYVDRLDAYRVDNLDKLVAKAITDSFGKGIWNKAIVALTHAQFSPPDGLPYDEFFSKRSEALLQVVRSGASLKKDAQASDIPVVLIENSGRCNKNDSDEKVLPNGIAWIPHLVQTITEVALNKSESIFVDKNLID 258
               SCOP domains d3bb1h_ H: automated matches                                                                                                                                                                                                                                SCOP domains
               CATH domains 3bb1H00 H:8-258 P-loop containing nucleotide triphosphate hydrolases                                                                                                                                                                                        CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhh.hhhhhhhhhhhhhhhhh...eeeeeeee....hhhhhhhhhhh................eeeeeee..eeeeeee..........hhhhhhhhhhhh..eee.eeeeeee......hhhhhhhhhhhhhhh.hhhhh.eeeeee..........hhhhhhhhhhhhhhhhhhhhhh....---....eee.....................hhhhhhhhhhhhhhh.....eeehhhhhh Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -----------------------------G_AIG1  PDB: H:37-258 UniProt: 37-261                                                                                                                                                                                          PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3bb1 H   8 VRGWSGINTFAPATQTKLLELLGNLKQEDVNSLTILVMGKGGVGKSSTVNSIIGERVVSISPFQSEGPRPVMVSRSRAGFTLNIIDTPGLIEGGYINDMALNIIKSFLLDKTIDVLLYVDRLDAYRVDNLDKLVAKAITDSFGKGIWNKAIVALTHAQFSPPDGLPYDEFFSKRSEALLQVVRSGASLKKD---SDIPVVLIENSGRCNKNDSDEKVLPNGIAWIPHLVQTITEVALNKSESIFVDKNLID 258
                                    17        27        37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197|   |  207       217       227       237       247       257 
                                                                                                                                                                                                                        198 202

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Asymmetric Unit

Classes(

)

Folds(

)

Superfamilies( (-)

)

Families(

)

Protein Domains( (-)

)

Organisms( (-)

)

Class: Alpha and beta proteins (a/b) (23833)

Fold: P-loop containing nucleoside triphosphate hydrolases (2083)

Superfamily: P-loop containing nucleoside triphosphate hydrolases (2083)

Family: G proteins (693)

Protein domain: automated matches (173)

Pea (Pisum sativum) [TaxId: 3888] (1)

1a	d3bb1a_	A:
1b	d3bb1b_	B:
1c	d3bb1c_	C:
1d	d3bb1d_	D:
1e	d3bb1e_	E:
1f	d3bb1f_	F:
1g	d3bb1g_	G:
1h	d3bb1h_	H:

Asymmetric Unit

Classes(

)

Architectures( (-)

)

Topologies( (-)

)

Homologous Superfamilies( (-)

)

Organisms( (-)

)

Class: Alpha Beta (26913)

Architecture: 3-Layer(aba) Sandwich (12045)

Topology: Rossmann fold (7312)

Homologous Superfamily: P-loop containing nucleotide triphosphate hydrolases (1378)

Pea (Pisum sativum) (1)

1a	3bb1B00	B:8-259
1b	3bb1F00	F:8-257
1c	3bb1C00	C:8-258
1d	3bb1D00	D:7-258
1e	3bb1E00	E:8-258
1f	3bb1H00	H:8-258
1g	3bb1G00	G:2-258
1h	3bb1A00	A:2-258

(no "Pfam Domain" information available for 3BB1)

Asymmetric Unit(hide GO term definitions)

Chain A,B,C,D,E,F,G,H (TOC34_PEA | Q41009)

molecular function
	GO:0005525	GTP binding	Interacting selectively and non-covalently with GTP, guanosine triphosphate.
	GO:0015450	P-P-bond-hydrolysis-driven protein transmembrane transporter activity	Primary active carrier-mediated transport of a protein across a membrane, driven by the hydrolysis of the diphosphate bond of inorganic pyrophosphate, ATP, or another nucleoside triphosphate. The transport protein may or may not be transiently phosphorylated, but the substrate is not phosphorylated.
	GO:0016787	hydrolase activity	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
	GO:0000166	nucleotide binding	Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
	GO:0005515	protein binding	Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
biological process
	GO:0006886	intracellular protein transport	The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell.
	GO:0071806	protein transmembrane transport	The directed movement of a protein across a membrane by means of some agent such as a transporter or pore.
	GO:0015031	protein transport	The directed movement of proteins into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
	GO:0006810	transport	The directed movement of substances (such as macromolecules, small molecules, ions) or cellular components (such as complexes and organelles) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter, pore or motor protein.
cellular component
	GO:0009507	chloroplast	A chlorophyll-containing plastid with thylakoids organized into grana and frets, or stroma thylakoids, and embedded in a stroma.
	GO:0009707	chloroplast outer membrane	The outer, i.e. cytoplasm-facing, lipid bilayer of the chloroplast envelope.
	GO:0016021	integral component of membrane	The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
	GO:0016020	membrane	A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
	GO:0009536	plastid	Any member of a family of organelles found in the cytoplasm of plants and some protists, which are membrane-bounded and contain DNA. Plant plastids develop from a common type, the proplastid.
	GO:0009527	plastid outer membrane	The outer, i.e. cytoplasm-facing, lipid bilayer of the plastid envelope.

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	Cis Peptide Bonds
		Ala B:201 - Ser B:202	[ RasMol ]
		Ala D:193 - Ser D:194	[ RasMol ]
		Ala F:193 - Ser F:194	[ RasMol ]
		Arg G:9 - Gly G:10	[ RasMol ]
		Asn F:245 - Lys F:246	[ RasMol ]
		Asp B:203 - Ile B:204	[ RasMol ]
		Asp D:198 - Ala D:199	[ RasMol ]
		Asp D:203 - Ile D:204	[ RasMol ]
		Asp F:170 - Gly F:171	[ RasMol ]
		Asp H:203 - Ile H:204	[ RasMol ]
		Glu C:73 - Gly C:74	[ RasMol ]
		Glu D:35 - Asp D:36	[ RasMol ]
		Glu F:73 - Gly F:74	[ RasMol ]
		Glu F:99 - Gly F:100	[ RasMol ]
		Gly D:74 - Pro D:75	[ RasMol ]
		Gly E:74 - Pro E:75	[ RasMol ]
		Gly F:100 - Gly F:101	[ RasMol ]
		Gly H:10 - Trp H:11	[ RasMol ]
		Gly H:74 - Pro H:75	[ RasMol ]
		Lys B:246 - Ser B:247	[ RasMol ]
		Ser A:202 - Asp A:203	[ RasMol ]
		Ser B:212 - Gly B:213	[ RasMol ]
		Ser B:220 - Asp B:221	[ RasMol ]
		Ser B:247 - Glu B:248	[ RasMol ]
		Ser C:72 - Glu C:73	[ RasMol ]
		Ser D:202 - Asp D:203	[ RasMol ]
		Ser E:202 - Asp E:203	[ RasMol ]
		Ser G:202 - Asp G:203	[ RasMol ]
		Val D:37 - Asn D:38	[ RasMol ]

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	3bb1
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	TOC34_PEA \| Q41009
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	3.6.5.-
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	TOC34_PEA \| Q41009	:	1h65

Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (4, 24)

Sites (24, 24)

SS Bonds (0, 0)

Cis Peptide Bonds (29, 29)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (1, 8)

Exons (0, 0)

Sequences/Alignments

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SCOP Domains (1, 8)

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