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3BB1
Biol. Unit 3
Info
Asym.Unit (330 KB)
Biol.Unit 1 (84 KB)
Biol.Unit 2 (84 KB)
Biol.Unit 3 (84 KB)
Biol.Unit 4 (84 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF TOC34 FROM PISUM SATIVUM IN COMPLEX WITH MG2+ AND GMPPNP
Authors
:
P. Koenig, I. Sinning, E. Schleiff, I. Tews
Date
:
09 Nov 07 (Deposition) - 01 Apr 08 (Release) - 12 Nov 14 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.80
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H
Biol. Unit 1: A,B (1x)
Biol. Unit 2: C,D (1x)
Biol. Unit 3: E,F (1x)
Biol. Unit 4: G,H (1x)
Keywords
:
Rossmann Fold, Gtpase Domain, Chloroplast Import, Gtp-Binding, Hydrolase, Membrane, Nucleotide-Binding, Outer Membrane, Protein Transport, Transmembrane, Transport
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
P. Koenig, M. Oreb, A. Hofle, S. Kaltofen, K. Rippe, I. Sinning, E. Schleiff, I. Tews
The Gtpase Cycle Of The Chloroplast Import Receptors Toc33/Toc34: Implications From Monomeric And Dimeric Structures.
Structure V. 16 585 2008
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Hetero Components
(3, 5)
Info
All Hetero Components
1a: PHOSPHOAMINOPHOSPHONIC ACID-GUANYL... (GNPa)
1b: PHOSPHOAMINOPHOSPHONIC ACID-GUANYL... (GNPb)
1c: PHOSPHOAMINOPHOSPHONIC ACID-GUANYL... (GNPc)
1d: PHOSPHOAMINOPHOSPHONIC ACID-GUANYL... (GNPd)
1e: PHOSPHOAMINOPHOSPHONIC ACID-GUANYL... (GNPe)
1f: PHOSPHOAMINOPHOSPHONIC ACID-GUANYL... (GNPf)
1g: PHOSPHOAMINOPHOSPHONIC ACID-GUANYL... (GNPg)
1h: PHOSPHOAMINOPHOSPHONIC ACID-GUANYL... (GNPh)
2a: GLYCEROL (GOLa)
2b: GLYCEROL (GOLb)
2c: GLYCEROL (GOLc)
2d: GLYCEROL (GOLd)
2e: GLYCEROL (GOLe)
2f: GLYCEROL (GOLf)
3a: MAGNESIUM ION (MGa)
3b: MAGNESIUM ION (MGb)
3c: MAGNESIUM ION (MGc)
3d: MAGNESIUM ION (MGd)
3e: MAGNESIUM ION (MGe)
3f: MAGNESIUM ION (MGf)
3g: MAGNESIUM ION (MGg)
3h: MAGNESIUM ION (MGh)
4a: TRIETHYLENE GLYCOL (PGEa)
4b: TRIETHYLENE GLYCOL (PGEb)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
GNP
2
Ligand/Ion
PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER
2
GOL
2
Ligand/Ion
GLYCEROL
3
MG
-1
Ligand/Ion
MAGNESIUM ION
4
PGE
1
Ligand/Ion
TRIETHYLENE GLYCOL
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Sites
(7, 7)
Info
All Sites
1: AC5 (SOFTWARE)
2: AC6 (SOFTWARE)
3: BC5 (SOFTWARE)
4: BC6 (SOFTWARE)
5: BC7 (SOFTWARE)
6: CC2 (SOFTWARE)
7: CC4 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
1
AC5
SOFTWARE
SER E:53 , HOH E:291 , HOH E:292 , HOH E:293
BINDING SITE FOR RESIDUE MG E 282
2
AC6
SOFTWARE
SER F:53 , HOH F:292 , HOH F:293 , HOH F:294
BINDING SITE FOR RESIDUE MG F 282
3
BC5
SOFTWARE
GLY E:48 , GLY E:49 , GLY E:51 , LYS E:52 , SER E:53 , SER E:54 , ILE E:67 , SER E:68 , PRO E:69 , THR E:162 , HIS E:163 , GLU E:210 , ASN E:211 , HOH E:291 , HOH E:292 , HOH E:293 , HOH E:302 , TYR F:132 , ARG F:133 , PRO F:169 , ASP F:170 , HOH F:317
BINDING SITE FOR RESIDUE GNP E 281
4
BC6
SOFTWARE
TYR E:132 , ARG E:133 , PRO E:169 , GLY F:48 , GLY F:49 , GLY F:51 , LYS F:52 , SER F:53 , SER F:54 , ILE F:67 , SER F:68 , PRO F:69 , SER F:72 , HIS F:163 , GLU F:210 , ASN F:211 , HOH F:292 , HOH F:293 , HOH F:294
BINDING SITE FOR RESIDUE GNP F 281
5
BC7
SOFTWARE
THR F:16 , PHE F:17 , ALA F:18 , ASN F:57 , SER F:58 , LYS F:223 , HOH F:325 , HOH F:326
BINDING SITE FOR RESIDUE PGE F 290
6
CC2
SOFTWARE
LYS C:151 , SER C:194 , ASN F:136 , LYS F:139
BINDING SITE FOR RESIDUE GOL F 291
7
CC4
SOFTWARE
LEU E:208 , LEU E:225 , ASN E:227 , ILE E:229 , HIS E:234 , HOH E:297
BINDING SITE FOR RESIDUE GOL E 290
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
View:
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Sorry, no Info available
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PROSITE Patterns/Profiles
(1, 2)
Info
All PROSITE Patterns/Profiles
1: G_AIG1 (E:37-258,F:37-257)
;
View:
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Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
G_AIG1
PS51720
AIG1-type G domain profile.
TOC34_PEA
37-261
2
-
-
-
-
E:37-258
F:37-257
-
-
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Exons
(0, 0)
Info
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(1, 8)
Info
All SCOP Domains
1a: SCOP_d3bb1a_ (A:)
1b: SCOP_d3bb1b_ (B:)
1c: SCOP_d3bb1c_ (C:)
1d: SCOP_d3bb1d_ (D:)
1e: SCOP_d3bb1e_ (E:)
1f: SCOP_d3bb1f_ (F:)
1g: SCOP_d3bb1g_ (G:)
1h: SCOP_d3bb1h_ (H:)
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)
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(
)
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)
(
)
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)
(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
P-loop containing nucleoside triphosphate hydrolases
(2083)
Superfamily
:
P-loop containing nucleoside triphosphate hydrolases
(2083)
Family
:
G proteins
(693)
Protein domain
:
automated matches
(173)
Pea (Pisum sativum) [TaxId: 3888]
(1)
1a
d3bb1a_
A:
1b
d3bb1b_
B:
1c
d3bb1c_
C:
1d
d3bb1d_
D:
1e
d3bb1e_
E:
1f
d3bb1f_
F:
1g
d3bb1g_
G:
1h
d3bb1h_
H:
[
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CATH Domains
(1, 8)
Info
all CATH domains
1a: CATH_3bb1B00 (B:8-259)
1b: CATH_3bb1F00 (F:8-257)
1c: CATH_3bb1C00 (C:8-258)
1d: CATH_3bb1D00 (D:7-258)
1e: CATH_3bb1E00 (E:8-258)
1f: CATH_3bb1H00 (H:8-258)
1g: CATH_3bb1G00 (G:2-258)
1h: CATH_3bb1A00 (A:2-258)
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(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
3-Layer(aba) Sandwich
(12045)
Topology
:
Rossmann fold
(7312)
Homologous Superfamily
:
P-loop containing nucleotide triphosphate hydrolases
(1378)
Pea (Pisum sativum)
(1)
1a
3bb1B00
B:8-259
1b
3bb1F00
F:8-257
1c
3bb1C00
C:8-258
1d
3bb1D00
D:7-258
1e
3bb1E00
E:8-258
1f
3bb1H00
H:8-258
1g
3bb1G00
G:2-258
1h
3bb1A00
A:2-258
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Pfam Domains
(0, 0)
Info
all PFAM domains
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Sorry, no Info available
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Chain E
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Asymmetric Unit 1
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Asym.Unit (330 KB)
Header - Asym.Unit
Biol.Unit 1 (84 KB)
Header - Biol.Unit 1
Biol.Unit 2 (84 KB)
Header - Biol.Unit 2
Biol.Unit 3 (84 KB)
Header - Biol.Unit 3
Biol.Unit 4 (84 KB)
Header - Biol.Unit 4
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