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(-) Description

Title :  STRUCTURE OF UDP-GLUCOSE DEHYDROGENASE V132 DELETION
 
Authors :  N. C. Sennett, Z. A. Wood
Date :  15 Aug 11  (Deposition) - 12 Oct 11  (Release) - 11 Jan 12  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.30
Chains :  Asym. Unit :  A,B,C
Biol. Unit 1:  A,B,C  (2x)
Keywords :  Feedback Inhibition, Rossmann Fold, Nucleotide Sugar Dehydrogenase, Nad Binding Protein, Oxidizes Udp-Glucose To Udp-Glucuronic Acid, Oxidoreductase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  N. C. Sennett, R. Kadirvelraj, Z. A. Wood
Conformational Flexibility In The Allosteric Regulation Of Human Udp-{Alpha}-D-Glucose 6-Dehydrogenase.
Biochemistry V. 50 9651 2011
PubMed-ID: 21961565  |  Reference-DOI: 10.1021/BI201381E

(-) Compounds

Molecule 1 - UDP-GLUCOSE 6-DEHYDROGENASE
    Chains: A, B, C
    EC Number: 1.1.1.22
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET15B
    Expression System Strain: BL21
    Expression System Taxid: 511693
    Expression System Vector Type: PLASMID
    Gene: NM_003359, UGDH
    Mutation: YES
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
    Synonym: UGDH, UDP-GLC DEHYDROGENASE, UDP-GLCDH, UDPGDH

 Structural Features

(-) Chains, Units

  123
Asymmetric Unit : ABC
Biological Unit 1 (2x): ABC

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 3TF5)

(-) Sites  (0, 0)

(no "Site" information available for 3TF5)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 3TF5)

(-) Cis Peptide Bonds  (3, 3)

Asymmetric Unit
No.Residues
1Lys A:433 -Pro A:434
2Lys B:433 -Pro B:434
3Lys C:433 -Pro C:434

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 3TF5)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 3TF5)

(-) Exons   (11, 33)

Asymmetric Unit (11, 33)
 ENSEMBLUniProtKBPDB
No.Transcript IDExonExon IDGenome LocationLengthIDLocationLengthCountLocationLength
1.2aENST000003164232aENSE00001236134chr4:39529238-39528903336UGDH_HUMAN-00--
1.5cENST000003164235cENSE00000826500chr4:39523139-39522971169UGDH_HUMAN1-54543A:3-54
B:2-54
C:2-54		52
53
53
1.6bENST000003164236bENSE00000711764chr4:39515804-39515703102UGDH_HUMAN55-88343A:55-88
B:55-88
C:55-88		34
34
34
1.7fENST000003164237fENSE00000711762chr4:39512481-39512281201UGDH_HUMAN89-155673A:89-154 (gaps)
B:89-154 (gaps)
C:89-154 (gaps)		67
67
67
1.8bENST000003164238bENSE00000826499chr4:39512170-39511973198UGDH_HUMAN156-221663A:155-220
B:155-220
C:155-220		66
66
66
1.9ENST000003164239ENSE00000826498chr4:39511527-39511380148UGDH_HUMAN222-271503A:221-270
B:221-270
C:221-270		50
50
50
1.10ENST0000031642310ENSE00000826497chr4:39510280-3951018695UGDH_HUMAN271-302323A:270-301
B:270-301
C:270-301		32
32
32
1.11ENST0000031642311ENSE00000826496chr4:39507368-39507238131UGDH_HUMAN303-346443A:302-345
B:302-345
C:302-345		44
44
44
1.12ENST0000031642312ENSE00000711745chr4:39506990-39506857134UGDH_HUMAN346-391463A:345-390 (gaps)
B:345-390 (gaps)
C:345-390 (gaps)		46
46
46
1.13ENST0000031642313ENSE00000711741chr4:39506128-3950603792UGDH_HUMAN391-421313A:390-420
B:390-420
C:390-420		31
31
31
1.14ENST0000031642314ENSE00000711736chr4:39505605-39505495111UGDH_HUMAN422-458373A:421-457
B:421-457
C:421-457		37
37
37
1.15dENST0000031642315dENSE00001420804chr4:39501873-395003751499UGDH_HUMAN459-494363A:458-465
B:458-465
C:458-465		8
8
8

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:458
 aligned with UGDH_HUMAN | O60701 from UniProtKB/Swiss-Prot  Length:494

    Alignment length:464
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422       432       442       452       462    
           UGDH_HUMAN     3 EIKKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNESRINAWNSPTLPIYEPGLKEVVESCRGKNLFFSTNIDDAIKEADLVFISVNTPTKTYGMGKGRAADLKYIEACARRIVQNSNGYKIVTEKSTVPVRAAESIRRIFDANTKPNLNLQVLSNPEFLAEGTAIKDLKNPDRVLIGGDETPEGQRAVQALCAVYEHWVPREKILTTNTWSSELSKLAANAFLAQRISSINSISALCEATGADVEEVATAIGMDQRIGNKFLKASVGFGGSCFQKDVLNLVYLCEALNLPEVARYWQQVIDMNDYQRRRFASRIIDSLFNTVTDKKIAILGFAFKKDTGDTRESSSIYISKYLMDEGAHLHIYDPKVPREQIVVDLSHPGVSEDDQVSRLVTISKDPYEACDGAHAVVICTEWDMFKELDYERIHKKMLKPAFIFDGRRVLDGLHNELQTIGFQIETIGKKV 466
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeee....hhhhhhhhhhhhh...eeeee..hhhhhhhhh.........hhhhhhhhhh...eeee.hhhhhhhhh.eeee..................hhhhhhhhhhhhhh..eeeeeee...-..hhhhhhhhhhhhh....eeeeeee........hhhhhhhh...eeee...hhhhhhhhhhhhhhhh...hhh.eeeehhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhh..................hhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.......eeeee.............hhhhhhhhhhhhh..eeeee....hhhhhhhhhh..-----.hhhhheee..hhhhhhh...eeee...hhhhhhhhhhhhhhhh....eeee.......hhhhhhhhh.eeee..... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.5c  PDB: A:3-54 UniProt: 1-54 [INCOMPLETE]   Exon 1.6b  PDB: A:55-88           Exon 1.7f  PDB: A:89-154 (gaps) UniProt: 89-155                    Exon 1.8b  PDB: A:155-220 UniProt: 156-221                        -------------------------------------------------Exon 1.10  PDB: A:270-301       Exon 1.11  PDB: A:302-345 UniProt: 303-346  --------------------------------------------Exon 1.13  PDB: A:390-420      Exon 1.14  PDB: A:421-457            1.15d    Transcript 1 (1)
           Transcript 1 (2) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Exon 1.9  PDB: A:221-270 UniProt: 222-271         --------------------------------------------------------------------------Exon 1.12  PDB: A:345-390 (gaps)              --------------------------------------------------------------------------- Transcript 1 (2)
                 3tf5 A   3 EIKKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNESRINAWNSPTLPIYEPGLKEVVESCRGKNLFFSTNIDDAIKEADLVFISVNTPTKTYGMGKGRAADLKYIEACARRIVQNSNGYKIVTEKST-PVRAAESIRRIFDANTKPNLNLQVLSNPEFLAEGTAIKDLKNPDRVLIGGDETPEGQRAVQALCAVYEHWVPREKILTTNTWSSELSKLAANAFLAQRISSINSISALCEATGADVEEVATAIGMDQRIGNKFLKASVGFGGSCFQKDVLNLVYLCEALNLPEVARYWQQVIDMNDYQRRRFASRIIDSLFNTVTDKKIAILGFAFKKDTGDTRESSSIYISKYLMDEGAHLHIYDPKVPREQIVVDLSHP-----DQVSRLVTISKDPYEACDGAHAVVICTEWDMFKELDYERIHKKMLKPAFIFDGRRVLDGLHNELQTIGFQIETIGKKV 465
                                    12        22        32        42        52        62        72        82        92       102       112       122        |-|      141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381|     |391       401       411       421       431       441       451       461    
                                                                                                                                                          131 |                                                                                                                                                                                                                                                       382   388                                                                             
                                                                                                                                                            132                                                                                                                                                                                                                                                                                                                                             


Chain B from PDB  Type:PROTEIN  Length:457
 aligned with UGDH_HUMAN | O60701 from UniProtKB/Swiss-Prot  Length:494

    Alignment length:465
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461     
           UGDH_HUMAN     2 FEIKKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNESRINAWNSPTLPIYEPGLKEVVESCRGKNLFFSTNIDDAIKEADLVFISVNTPTKTYGMGKGRAADLKYIEACARRIVQNSNGYKIVTEKSTVPVRAAESIRRIFDANTKPNLNLQVLSNPEFLAEGTAIKDLKNPDRVLIGGDETPEGQRAVQALCAVYEHWVPREKILTTNTWSSELSKLAANAFLAQRISSINSISALCEATGADVEEVATAIGMDQRIGNKFLKASVGFGGSCFQKDVLNLVYLCEALNLPEVARYWQQVIDMNDYQRRRFASRIIDSLFNTVTDKKIAILGFAFKKDTGDTRESSSIYISKYLMDEGAHLHIYDPKVPREQIVVDLSHPGVSEDDQVSRLVTISKDPYEACDGAHAVVICTEWDMFKELDYERIHKKMLKPAFIFDGRRVLDGLHNELQTIGFQIETIGKKV 466
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....eeeee....hhhhhhhhhhhhh...eeeee..hhhhhhhhhh........hhhhhhhh.....eeee.hhhhhhhhh.eeee..................hhhhhhhhhhhhhh...eeeeee...-..hhhhhhhhhhhhh.....eeeeee........hhhhhhhh...eeee...hhhhhhhhhhhhhhhh...hhh.eeeehhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhh..................hhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.......eeeee.............hhhhhhhhhhhh...eeeee....hhhhhhhhhh-------.hhhhheee..hhhhhhh...eeee...hhhhhhhhhhhhhhhh...eeeee.......hhhhhhhhheeeee..... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.5c  PDB: B:2-54 UniProt: 1-54 [INCOMPLETE]    Exon 1.6b  PDB: B:55-88           Exon 1.7f  PDB: B:89-154 (gaps) UniProt: 89-155                    Exon 1.8b  PDB: B:155-220 UniProt: 156-221                        -------------------------------------------------Exon 1.10  PDB: B:270-301       Exon 1.11  PDB: B:302-345 UniProt: 303-346  --------------------------------------------Exon 1.13  PDB: B:390-420      Exon 1.14  PDB: B:421-457            1.15d    Transcript 1 (1)
           Transcript 1 (2) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Exon 1.9  PDB: B:221-270 UniProt: 222-271         --------------------------------------------------------------------------Exon 1.12  PDB: B:345-390 (gaps)              --------------------------------------------------------------------------- Transcript 1 (2)
                 3tf5 B   2 FEIKKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNESRINAWNSPTLPIYEPGLKEVVESCRGKNLFFSTNIDDAIKEADLVFISVNTPTKTYGMGKGRAADLKYIEACARRIVQNSNGYKIVTEKST-PVRAAESIRRIFDANTKPNLNLQVLSNPEFLAEGTAIKDLKNPDRVLIGGDETPEGQRAVQALCAVYEHWVPREKILTTNTWSSELSKLAANAFLAQRISSINSISALCEATGADVEEVATAIGMDQRIGNKFLKASVGFGGSCFQKDVLNLVYLCEALNLPEVARYWQQVIDMNDYQRRRFASRIIDSLFNTVTDKKIAILGFAFKKDTGDTRESSSIYISKYLMDEGAHLHIYDPKVPREQIVVDLS-------DQVSRLVTISKDPYEACDGAHAVVICTEWDMFKELDYERIHKKMLKPAFIFDGRRVLDGLHNELQTIGFQIETIGKKV 465
                                    11        21        31        41        51        61        71        81        91       101       111       121       131 |     140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460     
                                                                                                                                                           131 |                                                                                                                                                                                                                                                     380     388                                                                             
                                                                                                                                                             132                                                                                                                                                                                                                                                                                                                                             


Chain C from PDB  Type:PROTEIN  Length:458
 aligned with UGDH_HUMAN | O60701 from UniProtKB/Swiss-Prot  Length:494

    Alignment length:465
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461     
           UGDH_HUMAN     2 FEIKKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNESRINAWNSPTLPIYEPGLKEVVESCRGKNLFFSTNIDDAIKEADLVFISVNTPTKTYGMGKGRAADLKYIEACARRIVQNSNGYKIVTEKSTVPVRAAESIRRIFDANTKPNLNLQVLSNPEFLAEGTAIKDLKNPDRVLIGGDETPEGQRAVQALCAVYEHWVPREKILTTNTWSSELSKLAANAFLAQRISSINSISALCEATGADVEEVATAIGMDQRIGNKFLKASVGFGGSCFQKDVLNLVYLCEALNLPEVARYWQQVIDMNDYQRRRFASRIIDSLFNTVTDKKIAILGFAFKKDTGDTRESSSIYISKYLMDEGAHLHIYDPKVPREQIVVDLSHPGVSEDDQVSRLVTISKDPYEACDGAHAVVICTEWDMFKELDYERIHKKMLKPAFIFDGRRVLDGLHNELQTIGFQIETIGKKV 466
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....eeeee.....hhhhhhhhhhhh...eeeee..hhhhhhhhh.........hhhhhhhh.....eeee.hhhhhhhh..eeee..................hhhhhhhhhhhhhhh.eeeeeee...-..hhhhhhhhhhhhh....eeeeeee........hhhhhhhh...eeee...hhhhhhhhhhhhhhhh...hhh.eeeehhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhh..................hhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.......eeeee.............hhhhhhhhhhhhh..eeeee....hhhhhhhhhh.------.hhhhheee..hhhhhhh...eeee...hhhhhhhhhhhhhhhh....eeee.......hhhhhhhhh.eeee..... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.5c  PDB: C:2-54 UniProt: 1-54 [INCOMPLETE]    Exon 1.6b  PDB: C:55-88           Exon 1.7f  PDB: C:89-154 (gaps) UniProt: 89-155                    Exon 1.8b  PDB: C:155-220 UniProt: 156-221                        -------------------------------------------------Exon 1.10  PDB: C:270-301       Exon 1.11  PDB: C:302-345 UniProt: 303-346  --------------------------------------------Exon 1.13  PDB: C:390-420      Exon 1.14  PDB: C:421-457            1.15d    Transcript 1 (1)
           Transcript 1 (2) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Exon 1.9  PDB: C:221-270 UniProt: 222-271         --------------------------------------------------------------------------Exon 1.12  PDB: C:345-390 (gaps)              --------------------------------------------------------------------------- Transcript 1 (2)
                 3tf5 C   2 FEIKKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNESRINAWNSPTLPIYEPGLKEVVESCRGKNLFFSTNIDDAIKEADLVFISVNTPTKTYGMGKGRAADLKYIEACARRIVQNSNGYKIVTEKST-PVRAAESIRRIFDANTKPNLNLQVLSNPEFLAEGTAIKDLKNPDRVLIGGDETPEGQRAVQALCAVYEHWVPREKILTTNTWSSELSKLAANAFLAQRISSINSISALCEATGADVEEVATAIGMDQRIGNKFLKASVGFGGSCFQKDVLNLVYLCEALNLPEVARYWQQVIDMNDYQRRRFASRIIDSLFNTVTDKKIAILGFAFKKDTGDTRESSSIYISKYLMDEGAHLHIYDPKVPREQIVVDLSH------DQVSRLVTISKDPYEACDGAHAVVICTEWDMFKELDYERIHKKMLKPAFIFDGRRVLDGLHNELQTIGFQIETIGKKV 465
                                    11        21        31        41        51        61        71        81        91       101       111       121       131 |     140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380|      390       400       410       420       430       440       450       460     
                                                                                                                                                           131 |                                                                                                                                                                                                                                                      381    388                                                                             
                                                                                                                                                             132
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 3TF5)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 3TF5)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 3TF5)

(-) Gene Ontology  (17, 17)

Asymmetric Unit(hide GO term definitions)
Chain A,B,C   (UGDH_HUMAN | O60701)
molecular function
    GO:0051287    NAD binding    Interacting selectively and non-covalently with nicotinamide adenine dinucleotide, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NAD+, or the reduced form, NADH.
    GO:0003979    UDP-glucose 6-dehydrogenase activity    Catalysis of the reaction: H(2)O + 2 NAD(+) + UDP-alpha-D-glucose = 3 H(+) + 2 NADH + UDP-alpha-D-glucuronate.
    GO:0003824    catalytic activity    Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
    GO:0009055    electron carrier activity    Any molecular entity that serves as an electron acceptor and electron donor in an electron transport chain. An electron transport chain is a process in which a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient.
    GO:0016491    oxidoreductase activity    Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
    GO:0016616    oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor    Catalysis of an oxidation-reduction (redox) reaction in which a CH-OH group acts as a hydrogen or electron donor and reduces NAD+ or NADP.
biological process
    GO:0006011    UDP-glucose metabolic process    The chemical reactions and pathways involving UDP-glucose, uridinediphosphoglucose, a substance composed of glucose in glycosidic linkage with uridine diphosphate.
    GO:0006065    UDP-glucuronate biosynthetic process    The chemical reactions and pathways resulting in the formation of UDP-glucuronate, a substance composed of glucuronic acid in glycosidic linkage with uridine diphosphate.
    GO:0005975    carbohydrate metabolic process    The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule.
    GO:0001702    gastrulation with mouth forming second    A gastrulation process in which the initial invagination becomes the anus and the mouth forms second.
    GO:0006024    glycosaminoglycan biosynthetic process    The chemical reactions and pathways resulting in the formation of glycosaminoglycans, any of a group of polysaccharides that contain amino sugars.
    GO:0008152    metabolic process    The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
    GO:0055114    oxidation-reduction process    A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
cellular component
    GO:0005829    cytosol    The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
    GO:0070062    extracellular exosome    A vesicle that is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane. Extracellular exosomes, also simply called exosomes, have a diameter of about 40-100 nm.
    GO:0005654    nucleoplasm    That part of the nuclear content other than the chromosomes or the nucleolus.
    GO:0005634    nucleus    A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.

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    Lys A:433 - Pro A:434   [ RasMol ]  
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    Protein Cavities: castP
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    Structure Alignment: STRAP(Java WebStart application, automatic local installation, requires Java; full application with system access!)
    Structure and Sequence Browser: STING
 
Access by UniProt ID/Accession number
  UGDH_HUMAN | O60701
    Protein Disorder Prediction: DisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)

 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        UGDH_HUMAN | O60701: 2q3e 2qg4 3itk 3khu 3prj 3ptz 3tdk 4edf 4qej 4rjt 5tjh

(-) Related Entries Specified in the PDB File

2q3e HUGDH:UDG:NADH
2qg4 HUGDH:UGA:NAD
3prj HUGDH:UDX (INHIBITED)
3ptz HUGDH:UDX (INHIBITED)