3KHU - JenaLib

Asym./Biol. Unit - manually (Jmol Viewer)

Asym./Biol. Unit (Jmol Viewer)

Asym./Biol. Unit - sites (Jmol Viewer)

Title :   CRYSTAL STRUCTURE OF HUMAN UDP-GLUCOSE DEHYDROGENASE GLU161GLN, IN COMPLEX WITH THIOHEMIACETAL INTERMEDIATE

Authors :   A. Chaikuad, S. Egger, W. W. Yue, K. Guo, R. Sethi, P. Filippakopoulos, J. R. C. Muniz, F. Von Delft, C. Bountra, C. H. Arrowsmith, J. Weigelt, A. M. Edwards, K. L. Kavanagh, B. Nidetzky, U. Oppermann, Structural Consortium (Sgc)

Date :   30 Oct 09 (Deposition) - 17 Nov 09 (Release) - 01 Feb 12 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   2.30

Chains :   Asym./Biol. Unit : A,B,C,D,E,F

Keywords :   Oxidoreductase, Thiohemiacetal Intermediate, Structural Genomics, Structural Genomics Consortium, Sgc (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   S. Egger, A. Chaikuad, M. Klimacek, K. L. Kavanagh, U. Oppermann, B. Nidetzky
Structural And Kinetic Evidence That Catalytic Reaction Of Human Udp-Glucose 6-Dehydrogenase Involves Covalent Thiohemiacetal And Thioester Enzyme Intermediates.
J. Biol. Chem. V. 287 2119 2012
PubMed-ID: 22123821 | Reference-DOI: 10.1074/JBC.M111.313015

Molecule 1 - UDP-GLUCOSE 6-DEHYDROGENASE
	Chains	:	A, B, C, D, E, F
	EC Number	:	1.1.1.22
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI
	Expression System Plasmid	:	PBEN1
	Expression System Strain	:	BL21(DE3)-R3-PRARE2
	Expression System Taxid	:	562
	Expression System Vector Type	:	PLASMID
	Fragment	:	UNP RESIDUES 1-466
	Gene	:	UGDH
	Mutation	:	YES
	Organism Common	:	HUMAN
	Organism Scientific	:	HOMO SAPIENS
	Organism Taxid	:	9606
	Synonym	:	UDP-GLC DEHYDROGENASE, UDP-GLCDH, UDPGDH

		1	2	3	4	5	6
Asymmetric/Biological Unit	:	A	B	C	D	E	F

Summary Information (see also Sequences/Alignments below)

Asymmetric/Biological Unit (3, 30)

No.	Name	Count	Type	Full Name
1	EDO	17	Ligand/Ion	1,2-ETHANEDIOL
2	EPE	1	Ligand/Ion	4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID
3	UPG	12	Ligand/Ion	URIDINE-5'-DIPHOSPHATE-GLUCOSE

Asymmetric Unit (30, 30)

No.	Name	Evidence	Residues	Description
01	AC1	SOFTWARE	GLN A:161 , PHE A:162 , LEU A:163 , ALA A:164 , GLU A:165 , LYS A:220 , ASN A:224 , ILE A:231 , PHE A:265 , LEU A:266 , LYS A:267 , SER A:269 , PHE A:272 , GLY A:273 , CYS A:276 , PHE A:277 , PHE A:338 , LYS A:339 , ARG A:442 , HOH A:485 , HOH A:521 , HOH A:530 , HOH A:543 , HOH A:596 , EDO A:615 , HOH A:655 , HOH A:831 , HOH A:951 , HOH A:1195 , ARG B:260	BINDING SITE FOR RESIDUE UPG A 501
02	AC2	SOFTWARE	GLY A:11 , GLY A:13 , TYR A:14 , VAL A:15 , ASP A:36 , VAL A:37 , ARG A:41 , SER A:88 , VAL A:89 , ASN A:90 , SER A:130 , THR A:131 , GLN A:161 , SER A:275 , CYS A:276 , ARG A:346 , HOH A:508 , HOH A:517 , HOH A:565 , HOH A:1193	BINDING SITE FOR RESIDUE UPG A 502
03	AC3	SOFTWARE	PHE A:2 , GLU A:3	BINDING SITE FOR RESIDUE EDO A 611
04	AC4	SOFTWARE	GLU A:289 , ALA A:297 , ARG A:298 , GLN A:301 , HOH A:886	BINDING SITE FOR RESIDUE EDO A 614
05	AC5	SOFTWARE	ALA A:268 , SER A:269 , ARG A:442 , UPG A:501 , HOH A:951	BINDING SITE FOR RESIDUE EDO A 615
06	AC6	SOFTWARE	ARG A:260 , GLN B:161 , PHE B:162 , LEU B:163 , ALA B:164 , GLU B:165 , LYS B:220 , ASN B:224 , ILE B:231 , PHE B:265 , LEU B:266 , LYS B:267 , SER B:269 , PHE B:272 , GLY B:273 , CYS B:276 , PHE B:277 , PHE B:338 , LYS B:339 , ARG B:442 , HOH B:468 , HOH B:475 , HOH B:504 , HOH B:534 , HOH B:541 , EDO B:608 , HOH B:739	BINDING SITE FOR RESIDUE UPG B 501
07	AC7	SOFTWARE	GLY B:11 , GLY B:13 , TYR B:14 , VAL B:15 , ASP B:36 , VAL B:37 , ASN B:38 , ARG B:41 , ASN B:90 , TYR B:108 , SER B:130 , THR B:131 , GLN B:161 , SER B:275 , CYS B:276 , ARG B:346 , HOH B:1027 , HOH B:1163 , HOH B:1211	BINDING SITE FOR RESIDUE UPG B 502
08	AC8	SOFTWARE	GLN A:229 , TYR A:299 , VAL A:303 , GLN B:229 , TYR B:299 , VAL B:303	BINDING SITE FOR RESIDUE EDO B 601
09	AC9	SOFTWARE	THR B:91 , ALA B:104 , LYS B:279 , ASP B:280	BINDING SITE FOR RESIDUE EDO B 602
10	BC1	SOFTWARE	GLU B:249 , ALA B:252 , ASN B:263 , HOH B:546	BINDING SITE FOR RESIDUE EDO B 607
11	BC2	SOFTWARE	PHE B:265 , UPG B:501 , HOH B:541	BINDING SITE FOR RESIDUE EDO B 608
12	BC3	SOFTWARE	LEU B:423 , TYR B:425 , GLU B:451 , HOH B:564	BINDING SITE FOR RESIDUE EDO B 612
13	BC4	SOFTWARE	GLN C:161 , PHE C:162 , LEU C:163 , ALA C:164 , GLU C:165 , LYS C:220 , ASN C:224 , ILE C:231 , PHE C:265 , LEU C:266 , LYS C:267 , SER C:269 , PHE C:272 , GLY C:273 , CYS C:276 , PHE C:277 , PHE C:338 , LYS C:339 , ARG C:442 , HOH C:504 , HOH C:506 , HOH C:517 , HOH C:625 , HOH C:825 , HOH C:1000 , HOH C:1001 , HOH C:1123 , ARG D:260	BINDING SITE FOR RESIDUE UPG C 501
14	BC5	SOFTWARE	GLY C:13 , TYR C:14 , VAL C:15 , ASP C:36 , VAL C:37 , ARG C:41 , VAL C:89 , ASN C:90 , SER C:130 , THR C:131 , GLN C:161 , SER C:275 , ARG C:346 , HOH C:484 , HOH C:491 , HOH C:1008	BINDING SITE FOR RESIDUE UPG C 502
15	BC6	SOFTWARE	ASP C:328 , HIS C:363 , HIS C:365	BINDING SITE FOR RESIDUE EDO C 604
16	BC7	SOFTWARE	VAL C:156 , ASP C:183 , THR C:213	BINDING SITE FOR RESIDUE EDO C 609
17	BC8	SOFTWARE	GLU C:289 , ARG C:298 , GLN C:301 , HOH C:902	BINDING SITE FOR RESIDUE EDO C 616
18	BC9	SOFTWARE	ARG C:260 , HOH C:618 , PHE D:162 , LEU D:163 , ALA D:164 , GLU D:165 , LYS D:220 , ASN D:224 , ILE D:231 , PHE D:265 , LEU D:266 , LYS D:267 , SER D:269 , PHE D:272 , GLY D:273 , CYS D:276 , PHE D:277 , PHE D:338 , LYS D:339 , ARG D:442 , HOH D:521 , HOH D:537 , HOH D:610 , HOH D:991 , HOH D:1022 , HOH D:1168	BINDING SITE FOR RESIDUE UPG D 501
19	CC1	SOFTWARE	GLY D:11 , GLY D:13 , TYR D:14 , VAL D:15 , ASP D:36 , VAL D:37 , ARG D:41 , VAL D:89 , ASN D:90 , TYR D:108 , SER D:130 , THR D:131 , GLN D:161 , SER D:275 , ARG D:346 , HOH D:513 , HOH D:791 , HOH D:953 , HOH D:1172 , HOH D:1183	BINDING SITE FOR RESIDUE UPG D 502
20	CC2	SOFTWARE	GLU C:184 , GLY D:447 , HIS D:449 , ASN D:450 , LYS D:464 , HOH D:803	BINDING SITE FOR RESIDUE EPE D 618
21	CC3	SOFTWARE	PHE E:162 , LEU E:163 , ALA E:164 , GLU E:165 , LYS E:220 , ASN E:224 , ILE E:231 , PHE E:265 , LEU E:266 , LYS E:267 , SER E:269 , PHE E:272 , GLY E:273 , CYS E:276 , PHE E:277 , PHE E:338 , LYS E:339 , ARG E:442 , HOH E:473 , HOH E:486 , HOH E:490 , UPG E:502 , HOH E:526 , HOH E:900 , HOH E:1005 , HOH E:1182 , ARG F:260	BINDING SITE FOR RESIDUE UPG E 501
22	CC4	SOFTWARE	GLY E:13 , TYR E:14 , VAL E:15 , ASP E:36 , VAL E:37 , ARG E:41 , TYR E:108 , SER E:130 , THR E:131 , SER E:275 , CYS E:276 , ARG E:346 , UPG E:501 , HOH E:505 , HOH E:518 , EDO E:613 , HOH E:1176	BINDING SITE FOR RESIDUE UPG E 502
23	CC5	SOFTWARE	ILE E:52 , TYR E:53 , GLU E:54 , GLY E:56 , LEU E:57 , LYS E:58 , GLU E:59	BINDING SITE FOR RESIDUE EDO E 603
24	CC6	SOFTWARE	HIS E:363 , HIS E:365 , ARG E:393 , LEU E:394 , HOH E:891	BINDING SITE FOR RESIDUE EDO E 605
25	CC7	SOFTWARE	LYS E:421 , GLU E:422 , LEU E:423	BINDING SITE FOR RESIDUE EDO E 606
26	CC8	SOFTWARE	ALA E:268 , SER E:269 , ARG E:442 , HOH E:900	BINDING SITE FOR RESIDUE EDO E 610
27	CC9	SOFTWARE	VAL E:37 , ARG E:115 , UPG E:502	BINDING SITE FOR RESIDUE EDO E 613
28	DC1	SOFTWARE	TYR A:96 , MET E:358 , GLN E:390 , ARG E:393	BINDING SITE FOR RESIDUE EDO E 617
29	DC2	SOFTWARE	ARG E:260 , GLN F:161 , PHE F:162 , LEU F:163 , GLU F:165 , LYS F:220 , ASN F:224 , ILE F:231 , PHE F:265 , LEU F:266 , LYS F:267 , SER F:269 , PHE F:272 , GLY F:273 , CYS F:276 , PHE F:277 , PHE F:338 , LYS F:339 , ARG F:442 , HOH F:469 , HOH F:480 , HOH F:489 , HOH F:522 , HOH F:760 , HOH F:1118	BINDING SITE FOR RESIDUE UPG F 501
30	DC3	SOFTWARE	GLY F:11 , GLY F:13 , TYR F:14 , VAL F:15 , ASP F:36 , VAL F:37 , ARG F:41 , VAL F:89 , SER F:130 , THR F:131 , GLN F:161 , SER F:275 , ARG F:346 , HOH F:490 , HOH F:498 , HOH F:594	BINDING SITE FOR RESIDUE UPG F 502

(no "SS Bond" information available for 3KHU)

Asymmetric/Biological Unit

No.	Residues
1	Lys A:434	-	Pro A:435
2	Lys B:434	-	Pro B:435
3	Lys C:434	-	Pro C:435
4	Lys D:434	-	Pro D:435
5	Lys E:434	-	Pro E:435
6	Lys F:434	-	Pro F:435

(no "SAP(SNP)/Variant" information available for 3KHU)

(no "PROSITE Motif" information available for 3KHU)

Asymmetric/Biological Unit (11, 66)

	ENSEMBL					UniProtKB			PDB
No.	Transcript ID	Exon	Exon ID	Genome Location	Length	ID	Location	Length	Count	Location	Length
1.2a	ENST00000316423	2a	ENSE00001236134	chr4:39529238-39528903	336	UGDH_HUMAN	-	0	0	-	-
1.5c	ENST00000316423	5c	ENSE00000826500	chr4:39523139-39522971	169	UGDH_HUMAN	1-54	54	6	A:1-54 B:1-54 C:1-54 D:1-54 E:1-54 F:1-54	54 54 54 54 54 54
1.6b	ENST00000316423	6b	ENSE00000711764	chr4:39515804-39515703	102	UGDH_HUMAN	55-88	34	6	A:55-88 B:55-88 C:55-88 D:55-88 E:55-88 F:55-88	34 34 34 34 34 34
1.7f	ENST00000316423	7f	ENSE00000711762	chr4:39512481-39512281	201	UGDH_HUMAN	89-155	67	6	A:89-155 B:89-155 C:89-155 D:89-155 E:89-155 F:89-155	67 67 67 67 67 67
1.8b	ENST00000316423	8b	ENSE00000826499	chr4:39512170-39511973	198	UGDH_HUMAN	156-221	66	6	A:156-221 B:156-221 C:156-221 D:156-221 E:156-221 F:156-221	66 66 66 66 66 66
1.9	ENST00000316423	9	ENSE00000826498	chr4:39511527-39511380	148	UGDH_HUMAN	222-271	50	6	A:222-271 B:222-271 C:222-271 D:222-271 E:222-271 F:222-271	50 50 50 50 50 50
1.10	ENST00000316423	10	ENSE00000826497	chr4:39510280-39510186	95	UGDH_HUMAN	271-302	32	6	A:271-302 B:271-302 C:271-302 D:271-302 E:271-302 F:271-302	32 32 32 32 32 32
1.11	ENST00000316423	11	ENSE00000826496	chr4:39507368-39507238	131	UGDH_HUMAN	303-346	44	6	A:303-346 B:303-346 C:303-346 D:303-346 E:303-346 F:303-346	44 44 44 44 44 44
1.12	ENST00000316423	12	ENSE00000711745	chr4:39506990-39506857	134	UGDH_HUMAN	346-391	46	6	A:346-391 (gaps) B:346-391 C:346-391 D:346-391 (gaps) E:346-391 F:346-391 (gaps)	46 46 46 46 46 46
1.13	ENST00000316423	13	ENSE00000711741	chr4:39506128-39506037	92	UGDH_HUMAN	391-421	31	6	A:391-421 B:391-421 C:391-421 D:391-421 E:391-421 F:391-421	31 31 31 31 31 31
1.14	ENST00000316423	14	ENSE00000711736	chr4:39505605-39505495	111	UGDH_HUMAN	422-458	37	6	A:422-458 B:422-458 C:422-458 D:422-458 E:422-458 F:422-458	37 37 37 37 37 37
1.15d	ENST00000316423	15d	ENSE00001420804	chr4:39501873-39500375	1499	UGDH_HUMAN	459-494	36	6	A:459-466 B:459-466 C:459-466 D:459-466 E:459-466 F:459-466	8 8 8 8 8 8

Asymmetric/Biological Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:463
 aligned with UGDH_HUMAN | O60701 from UniProtKB/Swiss-Prot  Length:494

    Alignment length:467
                             1                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
                             |       9        19        29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319       329       339       349       359       369       379       389       399       409       419       429       439       449       459       
           UGDH_HUMAN     - -MFEIKKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNESRINAWNSPTLPIYEPGLKEVVESCRGKNLFFSTNIDDAIKEADLVFISVNTPTKTYGMGKGRAADLKYIEACARRIVQNSNGYKIVTEKSTVPVRAAESIRRIFDANTKPNLNLQVLSNPEFLAEGTAIKDLKNPDRVLIGGDETPEGQRAVQALCAVYEHWVPREKILTTNTWSSELSKLAANAFLAQRISSINSISALCEATGADVEEVATAIGMDQRIGNKFLKASVGFGGSCFQKDVLNLVYLCEALNLPEVARYWQQVIDMNDYQRRRFASRIIDSLFNTVTDKKIAILGFAFKKDTGDTRESSSIYISKYLMDEGAHLHIYDPKVPREQIVVDLSHPGVSEDDQVSRLVTISKDPYEACDGAHAVVICTEWDMFKELDYERIHKKMLKPAFIFDGRRVLDGLHNELQTIGFQIETIGKKV 466
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 3khuA01 A:0-212 NAD(P)-binding Rossmann-like Domain                                                                                                                                                                  3khuA02 A:213-244               3khuA03 A:245-466 NAD(P)-binding Rossmann-like Domain                                                                                                                                                                          CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......eeeee....hhhhhhhhhhhhh...eeeee..hhhhhhhhh.........hhhhhhhhhh...eeee.hhhhhhhhh.eeee..................hhhhhhhhhhhhhh...eeeeee......hhhhhhhhhhhhh.....eeeeee........hhhhhhhh...eeee...hhhhhhhhhhhhhhhh...hhh.eeeehhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhh..................hhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.......eeeee.............hhhhhhhhhhhh...eeeee....hhhhhhhhh...----hhhhhhheee..hhhhhhh...eeee...hhhhhhhhhhhhhhhh....eeee.......hhhhhhhhh.eeee..... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) -Exon 1.5c  PDB: A:1-54 UniProt: 1-54                  Exon 1.6b  PDB: A:55-88           Exon 1.7f  PDB: A:89-155 UniProt: 89-155                           Exon 1.8b  PDB: A:156-221 UniProt: 156-221                        -------------------------------------------------Exon 1.10  PDB: A:271-302       Exon 1.11  PDB: A:303-346 UniProt: 303-346  --------------------------------------------Exon 1.13  PDB: A:391-421      Exon 1.14  PDB: A:422-458            1.15d    Transcript 1 (1)
           Transcript 1 (2) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Exon 1.9  PDB: A:222-271 UniProt: 222-271         --------------------------------------------------------------------------Exon 1.12  PDB: A:346-391 (gaps)              --------------------------------------------------------------------------- Transcript 1 (2)
                 3khu A   0 SMFEIKKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNESRINAWNSPTLPIYEPGLKEVVESCRGKNLFFSTNIDDAIKEADLVFISVNTPTKTYGMGKGRAADLKYIEACARRIVQNSNGYKIVTEKSTVPVRAAESIRRIFDANTKPNLNLQVLSNPQFLAEGTAIKDLKNPDRVLIGGDETPEGQRAVQALCAVYEHWVPREKILTTNTWSSELSKLAANAFLAQRISSINSISALCEATGADVEEVATAIGMDQRIGNKFLKASVGFGGSCFQKDVLNLVYLCEALNLPEVARYWQQVIDMNDYQRRRFASRIIDSLFNTVTDKKIAILGFAFKKDTGDTRESSSIYISKYLMDEGAHLHIYDPKVPREQIVVDLSHP----DDQVSRLVTISKDPYEACDGAHAVVICTEWDMFKELDYERIHKKMLKPAFIFDGRRVLDGLHNELQTIGFQIETIGKKV 466
                                     9        19        29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319       329       339       349       359       369       379   |   389       399       409       419       429       439       449       459       
                                                                                                                                                                                                                                                                                                                                                                                                                         383  388

Chain B from PDB  Type:PROTEIN  Length:467
 aligned with UGDH_HUMAN | O60701 from UniProtKB/Swiss-Prot  Length:494

    Alignment length:467
                             1                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
                             |       9        19        29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319       329       339       349       359       369       379       389       399       409       419       429       439       449       459       
           UGDH_HUMAN     - -MFEIKKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNESRINAWNSPTLPIYEPGLKEVVESCRGKNLFFSTNIDDAIKEADLVFISVNTPTKTYGMGKGRAADLKYIEACARRIVQNSNGYKIVTEKSTVPVRAAESIRRIFDANTKPNLNLQVLSNPEFLAEGTAIKDLKNPDRVLIGGDETPEGQRAVQALCAVYEHWVPREKILTTNTWSSELSKLAANAFLAQRISSINSISALCEATGADVEEVATAIGMDQRIGNKFLKASVGFGGSCFQKDVLNLVYLCEALNLPEVARYWQQVIDMNDYQRRRFASRIIDSLFNTVTDKKIAILGFAFKKDTGDTRESSSIYISKYLMDEGAHLHIYDPKVPREQIVVDLSHPGVSEDDQVSRLVTISKDPYEACDGAHAVVICTEWDMFKELDYERIHKKMLKPAFIFDGRRVLDGLHNELQTIGFQIETIGKKV 466
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 3khuB01 B:0-212 NAD(P)-binding Rossmann-like Domain                                                                                                                                                                  3khuB02 B:213-244               3khuB03 B:245-466 NAD(P)-binding Rossmann-like Domain                                                                                                                                                                          CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......eeeee....hhhhhhhhhhhhh...eeeee..hhhhhhhhh.........hhhhhhhhhh...eeee.hhhhhhhhh.eeee..................hhhhhhhhhhhhhh...eeeeee......hhhhhhhhhhhhh.....eeeeee........hhhhhhhh...eeee...hhhhhhhhhhhhhhhh...hhh.eeeehhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhh..................hhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.......eeeee.............hhhhhhhhhhhhh..eeeee....hhhhhhhhh.......hhhhhhheee..hhhhhhh...eeee...hhhhhhhhhhhhhhhh....eeee.......hhhhhhhhh.eeee..... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) -Exon 1.5c  PDB: B:1-54 UniProt: 1-54                  Exon 1.6b  PDB: B:55-88           Exon 1.7f  PDB: B:89-155 UniProt: 89-155                           Exon 1.8b  PDB: B:156-221 UniProt: 156-221                        -------------------------------------------------Exon 1.10  PDB: B:271-302       Exon 1.11  PDB: B:303-346 UniProt: 303-346  --------------------------------------------Exon 1.13  PDB: B:391-421      Exon 1.14  PDB: B:422-458            1.15d    Transcript 1 (1)
           Transcript 1 (2) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Exon 1.9  PDB: B:222-271 UniProt: 222-271         --------------------------------------------------------------------------Exon 1.12  PDB: B:346-391 UniProt: 346-391    --------------------------------------------------------------------------- Transcript 1 (2)
                 3khu B   0 SMFEIKKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNESRINAWNSPTLPIYEPGLKEVVESCRGKNLFFSTNIDDAIKEADLVFISVNTPTKTYGMGKGRAADLKYIEACARRIVQNSNGYKIVTEKSTVPVRAAESIRRIFDANTKPNLNLQVLSNPQFLAEGTAIKDLKNPDRVLIGGDETPEGQRAVQALCAVYEHWVPREKILTTNTWSSELSKLAANAFLAQRISSINSISALCEATGADVEEVATAIGMDQRIGNKFLKASVGFGGSCFQKDVLNLVYLCEALNLPEVARYWQQVIDMNDYQRRRFASRIIDSLFNTVTDKKIAILGFAFKKDTGDTRESSSIYISKYLMDEGAHLHIYDPKVPREQIVVDLSHPGVSEDDQVSRLVTISKDPYEACDGAHAVVICTEWDMFKELDYERIHKKMLKPAFIFDGRRVLDGLHNELQTIGFQIETIGKKV 466
                                     9        19        29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319       329       339       349       359       369       379       389       399       409       419       429       439       449       459

Chain C from PDB  Type:PROTEIN  Length:467
 aligned with UGDH_HUMAN | O60701 from UniProtKB/Swiss-Prot  Length:494

    Alignment length:467
                             1                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
                             |       9        19        29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319       329       339       349       359       369       379       389       399       409       419       429       439       449       459       
           UGDH_HUMAN     - -MFEIKKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNESRINAWNSPTLPIYEPGLKEVVESCRGKNLFFSTNIDDAIKEADLVFISVNTPTKTYGMGKGRAADLKYIEACARRIVQNSNGYKIVTEKSTVPVRAAESIRRIFDANTKPNLNLQVLSNPEFLAEGTAIKDLKNPDRVLIGGDETPEGQRAVQALCAVYEHWVPREKILTTNTWSSELSKLAANAFLAQRISSINSISALCEATGADVEEVATAIGMDQRIGNKFLKASVGFGGSCFQKDVLNLVYLCEALNLPEVARYWQQVIDMNDYQRRRFASRIIDSLFNTVTDKKIAILGFAFKKDTGDTRESSSIYISKYLMDEGAHLHIYDPKVPREQIVVDLSHPGVSEDDQVSRLVTISKDPYEACDGAHAVVICTEWDMFKELDYERIHKKMLKPAFIFDGRRVLDGLHNELQTIGFQIETIGKKV 466
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 3khuC01 C:0-212 NAD(P)-binding Rossmann-like Domain                                                                                                                                                                  3khuC02 C:213-244               3khuC03 C:245-466 NAD(P)-binding Rossmann-like Domain                                                                                                                                                                          CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......eeeee....hhhhhhhhhhhhh...eeeee..hhhhhhhhh.........hhhhhhhh.....eeee.hhhhhhhhh.eeee..................hhhhhhhhhhhhhh...eeeeee......hhhhhhhhhhhhh.....eeeeee........hhhhhhhh...eeee...hhhhhhhhhhhhhhhh...hhh.eeeehhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhh..................hhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.......eeeee.............hhhhhhhhhhhh...eeeee....hhhhhhhhh.......hhhhhhheee..hhhhhhh...eeee...hhhhhhhhhhhhhhhh....eeee.......hhhhhhhhh.eeee..... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) -Exon 1.5c  PDB: C:1-54 UniProt: 1-54                  Exon 1.6b  PDB: C:55-88           Exon 1.7f  PDB: C:89-155 UniProt: 89-155                           Exon 1.8b  PDB: C:156-221 UniProt: 156-221                        -------------------------------------------------Exon 1.10  PDB: C:271-302       Exon 1.11  PDB: C:303-346 UniProt: 303-346  --------------------------------------------Exon 1.13  PDB: C:391-421      Exon 1.14  PDB: C:422-458            1.15d    Transcript 1 (1)
           Transcript 1 (2) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Exon 1.9  PDB: C:222-271 UniProt: 222-271         --------------------------------------------------------------------------Exon 1.12  PDB: C:346-391 UniProt: 346-391    --------------------------------------------------------------------------- Transcript 1 (2)
                 3khu C   0 SMFEIKKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNESRINAWNSPTLPIYEPGLKEVVESCRGKNLFFSTNIDDAIKEADLVFISVNTPTKTYGMGKGRAADLKYIEACARRIVQNSNGYKIVTEKSTVPVRAAESIRRIFDANTKPNLNLQVLSNPQFLAEGTAIKDLKNPDRVLIGGDETPEGQRAVQALCAVYEHWVPREKILTTNTWSSELSKLAANAFLAQRISSINSISALCEATGADVEEVATAIGMDQRIGNKFLKASVGFGGSCFQKDVLNLVYLCEALNLPEVARYWQQVIDMNDYQRRRFASRIIDSLFNTVTDKKIAILGFAFKKDTGDTRESSSIYISKYLMDEGAHLHIYDPKVPREQIVVDLSHPGVSEDDQVSRLVTISKDPYEACDGAHAVVICTEWDMFKELDYERIHKKMLKPAFIFDGRRVLDGLHNELQTIGFQIETIGKKV 466
                                     9        19        29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319       329       339       349       359       369       379       389       399       409       419       429       439       449       459

Chain D from PDB  Type:PROTEIN  Length:464
 aligned with UGDH_HUMAN | O60701 from UniProtKB/Swiss-Prot  Length:494

    Alignment length:467
                             1                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
                             |       9        19        29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319       329       339       349       359       369       379       389       399       409       419       429       439       449       459       
           UGDH_HUMAN     - -MFEIKKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNESRINAWNSPTLPIYEPGLKEVVESCRGKNLFFSTNIDDAIKEADLVFISVNTPTKTYGMGKGRAADLKYIEACARRIVQNSNGYKIVTEKSTVPVRAAESIRRIFDANTKPNLNLQVLSNPEFLAEGTAIKDLKNPDRVLIGGDETPEGQRAVQALCAVYEHWVPREKILTTNTWSSELSKLAANAFLAQRISSINSISALCEATGADVEEVATAIGMDQRIGNKFLKASVGFGGSCFQKDVLNLVYLCEALNLPEVARYWQQVIDMNDYQRRRFASRIIDSLFNTVTDKKIAILGFAFKKDTGDTRESSSIYISKYLMDEGAHLHIYDPKVPREQIVVDLSHPGVSEDDQVSRLVTISKDPYEACDGAHAVVICTEWDMFKELDYERIHKKMLKPAFIFDGRRVLDGLHNELQTIGFQIETIGKKV 466
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 3khuD01 D:0-212 NAD(P)-binding Rossmann-like Domain                                                                                                                                                                  3khuD02 D:213-244               3khuD03 D:245-466 NAD(P)-binding Rossmann-like Domain                                                                                                                                                                          CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......eeeee....hhhhhhhhhhhhh...eeeee..hhhhhhhhh.........hhhhhhhhhh...eeee.hhhhhhhhh.eeee..................hhhhhhhhhhhhhh...eeeeee......hhhhhhhhhhhhh.....eeeeee........hhhhhhhh...eeee...hhhhhhhhhhhhhhhh...hhh.eeeehhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhh..................hhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.......eeeee.............hhhhhhhhhhhh...eeeee....hhhhhhhhh...---.hhhhhhheee..hhhhhhh...eeee...hhhhhhhhhhhhhhhh....eeee.......hhhhhhhhh.eeee..... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) -Exon 1.5c  PDB: D:1-54 UniProt: 1-54                  Exon 1.6b  PDB: D:55-88           Exon 1.7f  PDB: D:89-155 UniProt: 89-155                           Exon 1.8b  PDB: D:156-221 UniProt: 156-221                        -------------------------------------------------Exon 1.10  PDB: D:271-302       Exon 1.11  PDB: D:303-346 UniProt: 303-346  --------------------------------------------Exon 1.13  PDB: D:391-421      Exon 1.14  PDB: D:422-458            1.15d    Transcript 1 (1)
           Transcript 1 (2) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Exon 1.9  PDB: D:222-271 UniProt: 222-271         --------------------------------------------------------------------------Exon 1.12  PDB: D:346-391 (gaps)              --------------------------------------------------------------------------- Transcript 1 (2)
                 3khu D   0 SMFEIKKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNESRINAWNSPTLPIYEPGLKEVVESCRGKNLFFSTNIDDAIKEADLVFISVNTPTKTYGMGKGRAADLKYIEACARRIVQNSNGYKIVTEKSTVPVRAAESIRRIFDANTKPNLNLQVLSNPQFLAEGTAIKDLKNPDRVLIGGDETPEGQRAVQALCAVYEHWVPREKILTTNTWSSELSKLAANAFLAQRISSINSISALCEATGADVEEVATAIGMDQRIGNKFLKASVGFGGSCFQKDVLNLVYLCEALNLPEVARYWQQVIDMNDYQRRRFASRIIDSLFNTVTDKKIAILGFAFKKDTGDTRESSSIYISKYLMDEGAHLHIYDPKVPREQIVVDLSHP---EDDQVSRLVTISKDPYEACDGAHAVVICTEWDMFKELDYERIHKKMLKPAFIFDGRRVLDGLHNELQTIGFQIETIGKKV 466
                                     9        19        29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319       329       339       349       359       369       379   |   389       399       409       419       429       439       449       459       
                                                                                                                                                                                                                                                                                                                                                                                                                         383 387

Chain E from PDB  Type:PROTEIN  Length:466
 aligned with UGDH_HUMAN | O60701 from UniProtKB/Swiss-Prot  Length:494

    Alignment length:466
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460      
           UGDH_HUMAN     1 MFEIKKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNESRINAWNSPTLPIYEPGLKEVVESCRGKNLFFSTNIDDAIKEADLVFISVNTPTKTYGMGKGRAADLKYIEACARRIVQNSNGYKIVTEKSTVPVRAAESIRRIFDANTKPNLNLQVLSNPEFLAEGTAIKDLKNPDRVLIGGDETPEGQRAVQALCAVYEHWVPREKILTTNTWSSELSKLAANAFLAQRISSINSISALCEATGADVEEVATAIGMDQRIGNKFLKASVGFGGSCFQKDVLNLVYLCEALNLPEVARYWQQVIDMNDYQRRRFASRIIDSLFNTVTDKKIAILGFAFKKDTGDTRESSSIYISKYLMDEGAHLHIYDPKVPREQIVVDLSHPGVSEDDQVSRLVTISKDPYEACDGAHAVVICTEWDMFKELDYERIHKKMLKPAFIFDGRRVLDGLHNELQTIGFQIETIGKKV 466
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 3khuE01 E:1-212 NAD(P)-binding Rossmann-like Domain                                                                                                                                                                 3khuE02 E:213-244               3khuE03 E:245-466 NAD(P)-binding Rossmann-like Domain                                                                                                                                                                          CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....eeeee....hhhhhhhhhhhhh...eeeee..hhhhhhhhh.........hhhhhhhh.....eeee.hhhhhhhhh.eeee..................hhhhhhhhhhhhhh...eeeeee......hhhhhhhhhhhhh.....eeeeee........hhhhhhhh...eeee...hhhhhhhhhhhhhhhh...hhh.eeeehhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhh..................hhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.......eeeee.............hhhhhhhhhhhhh..eeeee....hhhhhhhhh.......hhhhhhheee..hhhhhhh...eeee...hhhhhhhhhhhhhhhh....eeee.......hhhhhhhhh.eeee..... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.5c  PDB: E:1-54 UniProt: 1-54                  Exon 1.6b  PDB: E:55-88           Exon 1.7f  PDB: E:89-155 UniProt: 89-155                           Exon 1.8b  PDB: E:156-221 UniProt: 156-221                        -------------------------------------------------Exon 1.10  PDB: E:271-302       Exon 1.11  PDB: E:303-346 UniProt: 303-346  --------------------------------------------Exon 1.13  PDB: E:391-421      Exon 1.14  PDB: E:422-458            1.15d    Transcript 1 (1)
           Transcript 1 (2) -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Exon 1.9  PDB: E:222-271 UniProt: 222-271         --------------------------------------------------------------------------Exon 1.12  PDB: E:346-391 UniProt: 346-391    --------------------------------------------------------------------------- Transcript 1 (2)
                 3khu E   1 MFEIKKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNESRINAWNSPTLPIYEPGLKEVVESCRGKNLFFSTNIDDAIKEADLVFISVNTPTKTYGMGKGRAADLKYIEACARRIVQNSNGYKIVTEKSTVPVRAAESIRRIFDANTKPNLNLQVLSNPQFLAEGTAIKDLKNPDRVLIGGDETPEGQRAVQALCAVYEHWVPREKILTTNTWSSELSKLAANAFLAQRISSINSISALCEATGADVEEVATAIGMDQRIGNKFLKASVGFGGSCFQKDVLNLVYLCEALNLPEVARYWQQVIDMNDYQRRRFASRIIDSLFNTVTDKKIAILGFAFKKDTGDTRESSSIYISKYLMDEGAHLHIYDPKVPREQIVVDLSHPGVSEDDQVSRLVTISKDPYEACDGAHAVVICTEWDMFKELDYERIHKKMLKPAFIFDGRRVLDGLHNELQTIGFQIETIGKKV 466
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460

Chain F from PDB  Type:PROTEIN  Length:462
 aligned with UGDH_HUMAN | O60701 from UniProtKB/Swiss-Prot  Length:494

    Alignment length:467
                             1                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
                             |       9        19        29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319       329       339       349       359       369       379       389       399       409       419       429       439       449       459       
           UGDH_HUMAN     - -MFEIKKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNESRINAWNSPTLPIYEPGLKEVVESCRGKNLFFSTNIDDAIKEADLVFISVNTPTKTYGMGKGRAADLKYIEACARRIVQNSNGYKIVTEKSTVPVRAAESIRRIFDANTKPNLNLQVLSNPEFLAEGTAIKDLKNPDRVLIGGDETPEGQRAVQALCAVYEHWVPREKILTTNTWSSELSKLAANAFLAQRISSINSISALCEATGADVEEVATAIGMDQRIGNKFLKASVGFGGSCFQKDVLNLVYLCEALNLPEVARYWQQVIDMNDYQRRRFASRIIDSLFNTVTDKKIAILGFAFKKDTGDTRESSSIYISKYLMDEGAHLHIYDPKVPREQIVVDLSHPGVSEDDQVSRLVTISKDPYEACDGAHAVVICTEWDMFKELDYERIHKKMLKPAFIFDGRRVLDGLHNELQTIGFQIETIGKKV 466
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 3khuF01 F:0-212 NAD(P)-binding Rossmann-like Domain                                                                                                                                                                  3khuF02 F:213-244               3khuF03 F:245-466 NAD(P)-binding Rossmann-like Domain                                                                                                                                                                          CATH domains
           Pfam domains (1) -----UDPG_MGDP_dh_N-3khuF07 F:5-195                                                                                                                                                                 -----------------UDPG_MGDP_dh-3khuF01 F:213-310                                                                    ---------------------UDPG_MGDP_dh_C-3khuF13 F:332-447                                                                                    ------------------- Pfam domains (1)
           Pfam domains (2) -----UDPG_MGDP_dh_N-3khuF08 F:5-195                                                                                                                                                                 -----------------UDPG_MGDP_dh-3khuF02 F:213-310                                                                    ---------------------UDPG_MGDP_dh_C-3khuF14 F:332-447                                                                                    ------------------- Pfam domains (2)
           Pfam domains (3) -----UDPG_MGDP_dh_N-3khuF09 F:5-195                                                                                                                                                                 -----------------UDPG_MGDP_dh-3khuF03 F:213-310                                                                    ---------------------UDPG_MGDP_dh_C-3khuF15 F:332-447                                                                                    ------------------- Pfam domains (3)
           Pfam domains (4) -----UDPG_MGDP_dh_N-3khuF10 F:5-195                                                                                                                                                                 -----------------UDPG_MGDP_dh-3khuF04 F:213-310                                                                    ---------------------UDPG_MGDP_dh_C-3khuF16 F:332-447                                                                                    ------------------- Pfam domains (4)
           Pfam domains (5) -----UDPG_MGDP_dh_N-3khuF11 F:5-195                                                                                                                                                                 -----------------UDPG_MGDP_dh-3khuF05 F:213-310                                                                    ---------------------UDPG_MGDP_dh_C-3khuF17 F:332-447                                                                                    ------------------- Pfam domains (5)
           Pfam domains (6) -----UDPG_MGDP_dh_N-3khuF12 F:5-195                                                                                                                                                                 -----------------UDPG_MGDP_dh-3khuF06 F:213-310                                                                    ---------------------UDPG_MGDP_dh_C-3khuF18 F:332-447                                                                                    ------------------- Pfam domains (6)
         Sec.struct. author ......eeeee....hhhhhhhhhhhhh...eeeee..hhhhhhhhh.........hhhhhhhh.....eeee.hhhhhhhhh.eeee..................hhhhhhhhhhhhhh...eeeeee......hhhhhhhhhhhhh.....eeeeee........hhhhhhhh...eeee...hhhhhhhhhhhhhhhh...hhh.eeeehhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhh..................hhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.......eeeee.............hhhhhhhhhhhhh..eeeee....hhhhhhhhh...-----hhhhhheee..hhhhhhh...eeee...hhhhhhhhhhhhhhhh....eeee.......hhhhhhhhh.eeee..... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) -Exon 1.5c  PDB: F:1-54 UniProt: 1-54                  Exon 1.6b  PDB: F:55-88           Exon 1.7f  PDB: F:89-155 UniProt: 89-155                           Exon 1.8b  PDB: F:156-221 UniProt: 156-221                        -------------------------------------------------Exon 1.10  PDB: F:271-302       Exon 1.11  PDB: F:303-346 UniProt: 303-346  --------------------------------------------Exon 1.13  PDB: F:391-421      Exon 1.14  PDB: F:422-458            1.15d    Transcript 1 (1)
           Transcript 1 (2) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Exon 1.9  PDB: F:222-271 UniProt: 222-271         --------------------------------------------------------------------------Exon 1.12  PDB: F:346-391 (gaps)              --------------------------------------------------------------------------- Transcript 1 (2)
                 3khu F   0 SMFEIKKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNESRINAWNSPTLPIYEPGLKEVVESCRGKNLFFSTNIDDAIKEADLVFISVNTPTKTYGMGKGRAADLKYIEACARRIVQNSNGYKIVTEKSTVPVRAAESIRRIFDANTKPNLNLQVLSNPQFLAEGTAIKDLKNPDRVLIGGDETPEGQRAVQALCAVYEHWVPREKILTTNTWSSELSKLAANAFLAQRISSINSISALCEATGADVEEVATAIGMDQRIGNKFLKASVGFGGSCFQKDVLNLVYLCEALNLPEVARYWQQVIDMNDYQRRRFASRIIDSLFNTVTDKKIAILGFAFKKDTGDTRESSSIYISKYLMDEGAHLHIYDPKVPREQIVVDLSHP-----DQVSRLVTISKDPYEACDGAHAVVICTEWDMFKELDYERIHKKMLKPAFIFDGRRVLDGLHNELQTIGFQIETIGKKV 466
                                     9        19        29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309       319       329       339       349       359       369       379   |   389       399       409       419       429       439       449       459       
                                                                                                                                                                                                                                                                                                                                                                                                                         383   389

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

(no "SCOP Domain" information available for 3KHU)

Asymmetric/Biological Unit

Classes(

)

Architectures( (-)

)

Topologies( (-)

)

Homologous Superfamilies( (-)

)

Organisms( (-)

)

Class: Alpha Beta (26913)

Architecture: 3-Layer(aba) Sandwich (12045)

Topology: Rossmann fold (7312)

Homologous Superfamily: NAD(P)-binding Rossmann-like Domain (1244)

Human (Homo sapiens) (188)

1a	3khuE01	E:1-212
1b	3khuA01	A:0-212
1c	3khuB01	B:0-212
1d	3khuC01	C:0-212
1e	3khuD01	D:0-212
1f	3khuF01	F:0-212
1g	3khuF03	F:245-466
1h	3khuA03	A:245-466
1i	3khuD03	D:245-466
1j	3khuB03	B:245-466
1k	3khuC03	C:245-466
1l	3khuE03	E:245-466

Class: Mainly Alpha (13335)

Architecture: Up-down Bundle (3216)

Topology: Single alpha-helices involved in coiled-coils or other helix-helix interfaces (552)

Homologous Superfamily: [code=1.20.5.100, no name defined] (56)

Human (Homo sapiens) (9)

2a	3khuA02	A:213-244
2b	3khuB02	B:213-244
2c	3khuC02	C:213-244
2d	3khuD02	D:213-244
2e	3khuE02	E:213-244
2f	3khuF02	F:213-244

Asymmetric/Biological Unit

Clans(

)

Families(

)

Organisms( (-)

)

Clan: 6PGD_C (47)

Family: UDPG_MGDP_dh (10)

Homo sapiens (Human) (5)

1a	UDPG_MGDP_dh-3khuF01	F:213-310
1b	UDPG_MGDP_dh-3khuF02	F:213-310
1c	UDPG_MGDP_dh-3khuF03	F:213-310
1d	UDPG_MGDP_dh-3khuF04	F:213-310
1e	UDPG_MGDP_dh-3khuF05	F:213-310
1f	UDPG_MGDP_dh-3khuF06	F:213-310

Clan: NADP_Rossmann (1239)

Family: UDPG_MGDP_dh_N (10)

Homo sapiens (Human) (5)

2a	UDPG_MGDP_dh_N-3khuF07	F:5-195
2b	UDPG_MGDP_dh_N-3khuF08	F:5-195
2c	UDPG_MGDP_dh_N-3khuF09	F:5-195
2d	UDPG_MGDP_dh_N-3khuF10	F:5-195
2e	UDPG_MGDP_dh_N-3khuF11	F:5-195
2f	UDPG_MGDP_dh_N-3khuF12	F:5-195

Clan: no clan defined [family: UDPG_MGDP_dh_C] (10)

Family: UDPG_MGDP_dh_C (10)

Homo sapiens (Human) (5)

3a	UDPG_MGDP_dh_C-3khuF13	F:332-447
3b	UDPG_MGDP_dh_C-3khuF14	F:332-447
3c	UDPG_MGDP_dh_C-3khuF15	F:332-447
3d	UDPG_MGDP_dh_C-3khuF16	F:332-447
3e	UDPG_MGDP_dh_C-3khuF17	F:332-447
3f	UDPG_MGDP_dh_C-3khuF18	F:332-447

Asymmetric/Biological Unit(hide GO term definitions)

Chain A,B,C,D,E,F (UGDH_HUMAN | O60701)

molecular function
	GO:0051287	NAD binding	Interacting selectively and non-covalently with nicotinamide adenine dinucleotide, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NAD+, or the reduced form, NADH.
	GO:0003979	UDP-glucose 6-dehydrogenase activity	Catalysis of the reaction: H(2)O + 2 NAD(+) + UDP-alpha-D-glucose = 3 H(+) + 2 NADH + UDP-alpha-D-glucuronate.
	GO:0003824	catalytic activity	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
	GO:0009055	electron carrier activity	Any molecular entity that serves as an electron acceptor and electron donor in an electron transport chain. An electron transport chain is a process in which a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient.
	GO:0016491	oxidoreductase activity	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
	GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	Catalysis of an oxidation-reduction (redox) reaction in which a CH-OH group acts as a hydrogen or electron donor and reduces NAD+ or NADP.
biological process
	GO:0006011	UDP-glucose metabolic process	The chemical reactions and pathways involving UDP-glucose, uridinediphosphoglucose, a substance composed of glucose in glycosidic linkage with uridine diphosphate.
	GO:0006065	UDP-glucuronate biosynthetic process	The chemical reactions and pathways resulting in the formation of UDP-glucuronate, a substance composed of glucuronic acid in glycosidic linkage with uridine diphosphate.
	GO:0005975	carbohydrate metabolic process	The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule.
	GO:0001702	gastrulation with mouth forming second	A gastrulation process in which the initial invagination becomes the anus and the mouth forms second.
	GO:0006024	glycosaminoglycan biosynthetic process	The chemical reactions and pathways resulting in the formation of glycosaminoglycans, any of a group of polysaccharides that contain amino sugars.
	GO:0008152	metabolic process	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
	GO:0055114	oxidation-reduction process	A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
cellular component
	GO:0005829	cytosol	The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
	GO:0070062	extracellular exosome	A vesicle that is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane. Extracellular exosomes, also simply called exosomes, have a diameter of about 40-100 nm.
	GO:0005654	nucleoplasm	That part of the nuclear content other than the chromosomes or the nucleolus.
	GO:0005634	nucleus	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.

Asymmetric/Biological Unit
	Complete Structure
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	Ligands, Modified Residues, Ions
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	Cis Peptide Bonds
		Lys A:434 - Pro A:435	[ RasMol ]
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Access by PDB/NDB ID
	3khu
		Family and Domain Information	:	ProDom \| SYSTERS
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		Orientation in Membranes	:	OPM
		Protein Surface	:	SURFACE
		Secondary Structure	:	DSSP (structure derived) \| HSSP (homology derived)
		Structural Genomics	:	GeneCensus
		Structural Neighbours	:	CE \| VAST
		Structure Classification	:	CATH \| Dali \| SCOP
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Access by UniProt ID/Accession number
	UGDH_HUMAN \| O60701
		Comparative Protein Structure Models	:	ModBase
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		Protein-protein Interaction	:	DIP
		Sequence, Family and Domain Information	:	InterPro \| Pfam \| SMART \| UniProtKB/SwissProt

Access by Enzyme Classificator (EC Number)
	1.1.1.22
		General Enzyme Information	:	BRENDA \| EC-PDB \| Enzyme \| IntEnz
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	(no 'MIM ID' available)
		Disease Information	:	OMIM

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Access by PDB/NDB ID
		Domain Information	:	XDom
		Interatomic Contacts of Structural Units	:	CSU
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Access by UniProt ID/Accession number
	UGDH_HUMAN \| O60701
		Protein Disorder Prediction	:	DisEMBL \| FoldIndex \| GLOBPLOT (for more information see DisProt)

UniProtKB/Swiss-Prot
	UGDH_HUMAN \| O60701	:	2q3e 2qg4 3itk 3prj 3ptz 3tdk 3tf5 4edf 4qej 4rjt 5tjh

2q3e	UDP-GLUCOSE DEHYDROGENASE, TERNARY COMPLEX, WITH NADH AND UDP-GLUCOSE
2qg4	UDP-GLUCOSE DEHYDROGENASE, TERNARY PRODUCT COMPLEX, WITH NAD AND UDP-GLUCORONATE
3itk	UDP-GLUCOSE DEHYDROGENASE T131A, APO FORM

Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (3, 30)

Sites (30, 30)

SS Bonds (0, 0)

Cis Peptide Bonds (6, 6)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (0, 0)

Exons (11, 66)

Sequences/Alignments

Classification and Annotation

SCOP Domains (0, 0)

CATH Domains (2, 18)

Pfam Domains (3, 18)

Gene Ontology (17, 17)

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Related Entries

Entries Sharing at Least One Protein Chain (UniProt ID)

Related Entries Specified in the PDB File