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(-) Description

Title :  CRYSTAL STRUCTURE OF PSEUDOMONAS AERUGINOSA OCCD2 (OPDC)
 
Authors :  B. Van Den Berg, E. Eren
Date :  16 Jul 11  (Deposition) - 08 Feb 12  (Release) - 08 Feb 12  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.80
Chains :  Asym. Unit :  A,B,C,D
Biol. Unit 1:  A  (1x)
Biol. Unit 2:  B  (1x)
Biol. Unit 3:  C  (1x)
Biol. Unit 4:  D  (1x)
Keywords :  Beta-Barrel, Channel, Bacterial Outer Membrane, Membrane Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  E. Eren, J. Vijayaraghavan, J. Liu, B. R. Cheneke, D. S. Touw, B. W. Lepore, M. Indic, L. Movileanu, B. Van Den Berg
Substrate Specificity Within A Family Of Outer Membrane Carboxylate Channels.
Plos Biol. V. 10 01242 2012
PubMed-ID: 22272184  |  Reference-DOI: 10.1371/JOURNAL.PBIO.1001242

(-) Compounds

Molecule 1 - HISTIDINE PORIN OPDC
    Chains: A, B, C, D
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Gene: OPDC, PA0162
    Organism Scientific: PSEUDOMONAS AERUGINOSA
    Organism Taxid: 287

 Structural Features

(-) Chains, Units

  1234
Asymmetric Unit : ABCD
Biological Unit 1 (1x): A   
Biological Unit 2 (1x):  B  
Biological Unit 3 (1x):   C 
Biological Unit 4 (1x):    D

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 20)

Asymmetric Unit (2, 20)
No.NameCountTypeFull Name
1BOG2Ligand/IonB-OCTYLGLUCOSIDE
2C8E18Ligand/Ion(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE
Biological Unit 1 (2, 6)
No.NameCountTypeFull Name
1BOG1Ligand/IonB-OCTYLGLUCOSIDE
2C8E5Ligand/Ion(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE
Biological Unit 2 (2, 7)
No.NameCountTypeFull Name
1BOG1Ligand/IonB-OCTYLGLUCOSIDE
2C8E6Ligand/Ion(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE
Biological Unit 3 (1, 5)
No.NameCountTypeFull Name
1BOG-1Ligand/IonB-OCTYLGLUCOSIDE
2C8E5Ligand/Ion(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE
Biological Unit 4 (1, 2)
No.NameCountTypeFull Name
1BOG-1Ligand/IonB-OCTYLGLUCOSIDE
2C8E2Ligand/Ion(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE

(-) Sites  (19, 19)

Asymmetric Unit (19, 19)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREPHE D:43 , GLY D:64 , MET D:65 , SER D:103BINDING SITE FOR RESIDUE C8E A 501
02AC2SOFTWAREPHE A:47 , ALA A:62 , TYR A:63 , GLY A:104 , GLY A:105 , BOG A:506 , TYR D:417BINDING SITE FOR RESIDUE C8E A 502
03AC3SOFTWAREPHE A:113 , THR A:115 , SER A:150 , LEU C:119 , GLY C:120BINDING SITE FOR RESIDUE C8E A 503
04AC4SOFTWARELEU A:119 , ARG A:142 , GLY A:143 , ILE D:10 , PHE D:422BINDING SITE FOR RESIDUE C8E A 504
05AC5SOFTWAREGLY A:196 , LEU A:208 , LEU C:146 , ASN C:148BINDING SITE FOR RESIDUE C8E A 505
06AC6SOFTWARESER A:102 , SER A:103 , GLY A:104 , C8E A:502 , PRO D:382BINDING SITE FOR RESIDUE BOG A 506
07AC7SOFTWARETYR B:63 , GLY B:104 , BOG B:507 , TYR C:417BINDING SITE FOR RESIDUE C8E B 501
08AC8SOFTWAREALA B:112 , PHE B:113 , THR B:115 , SER B:150 , LEU D:119 , ARG D:142 , C8E D:501BINDING SITE FOR RESIDUE C8E B 502
09AC9SOFTWARELEU B:117 , VAL B:144 , GLN B:160 , PRO D:53BINDING SITE FOR RESIDUE C8E B 503
10BC1SOFTWARELEU B:119 , ARG B:142 , GLY B:143 , ILE C:10 , PHE C:422BINDING SITE FOR RESIDUE C8E B 504
11BC2SOFTWARELEU B:194 , TRP B:198 , LEU B:208 , C8E B:506 , ASN D:148BINDING SITE FOR RESIDUE C8E B 505
12BC3SOFTWARETYR B:220 , TYR B:242 , C8E B:505BINDING SITE FOR RESIDUE C8E B 506
13BC4SOFTWARESER B:102 , SER B:103 , GLY B:104 , C8E B:501 , PRO C:382BINDING SITE FOR RESIDUE BOG B 507
14BC5SOFTWAREPHE A:113 , ALA C:106 , LEU C:108 , ARG C:142BINDING SITE FOR RESIDUE C8E C 501
15BC6SOFTWARELEU A:154 , TRP A:198 , ALA C:210 , ALA C:211 , GLU C:212 , LYS C:218BINDING SITE FOR RESIDUE C8E C 502
16BC7SOFTWARELEU A:117 , VAL A:144 , PRO C:53 , ILE D:10BINDING SITE FOR RESIDUE C8E C 504
17BC8SOFTWARELEU C:317BINDING SITE FOR RESIDUE C8E C 505
18BC9SOFTWAREPHE B:113 , C8E B:502 , ALA D:106 , LEU D:108 , ARG D:142BINDING SITE FOR RESIDUE C8E D 501
19CC1SOFTWARETRP B:198BINDING SITE FOR RESIDUE C8E D 502

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 3SY9)

(-) Cis Peptide Bonds  (1, 1)

Asymmetric Unit
No.Residues
1Pro B:53 -Gly B:54

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 3SY9)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 3SY9)

(-) Exons   (0, 0)

(no "Exon" information available for 3SY9)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:371
 aligned with Q9I6X0_PSEAE | Q9I6X0 from UniProtKB/TrEMBL  Length:444

    Alignment length:416
                                    38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438      
         Q9I6X0_PSEAE    29 EGFIEGSSLQLLTRNYYFNHDRRHASGHDSKEWAQGFIATFQSGYTPGVVGFGVDAYGMLGLKLDGGGGTGGTSILPITSPSKEGYESGKAPDEFSSGGAALKIRAFDTELKLGDQFLSNPVVAGGESRMLPQTFRGVSLTNNSFEDLTLTAGQVSFTKYYNQSGHRRLGSYYGELPGDRDSHHLSWLGGTWGGIEGFTSSLYAAELQNVWKQYYADVDYTYEIDDNWSLNPGAHYYKTVDSGDSLLGRIDNNTYSLHFAVGYRQHTVTAVLQKVNGNTPFDYINQGDSIFLDNSQQYSDFNGPNEKSWKLQYDYDFVALGLPGLSASASYSRGKLDLTRVDPDSPGYGGWYSADGKNAKHWERDLDLQYVVQGGPAKDLSLRLRWATHRGTGGYSAVDNDIDEYRVIVDYPIDVF 444
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......eeeeeeeeeeeeeee.------.eeeeeeeeeeee.......eeeeeeeeeeeeee.---------------------........eeeeeeeeeeeee..eeeeeeee..ee..ee..........eeeeeeee.....eeeeeeeeee.....------------------..eeeeeeeeeeeee..eeeeeeeeee...eeeeeeeeee.ee....eeeeeeeeeeeeee.........eeeeeeeeeeeee..eeeeeeeeeee..............................eeeeeeeeee.hhhh...eeeeeeeeeee.hhhhh......hhhhh.......eeeeeeeeeeee.........eeeeeeeeeeee.hhhhh...eeeeeeeeeeeeee. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3sy9 A   7 EGFIEGSSLQLLTRNYYFNHDRR------SKEWAQGFIATFQSGYTPGVVGFGVDAYGMLGLKL---------------------YESGKAPDEFSSGGAALKIRAFDTELKLGDQFLSNPVVAGGESRMLPQTFRGVSLTNNSFEDLTLTAGQVSFTKYYN------------------DSHHLSWLGGTWGGIEGFTSSLYAAELQNVWKQYYADVDYTYEIDDNWSLNPGAHYYKTVDSGDSLLGRIDNNTYSLHFAVGYRQHTVTAVLQKVNGNTPFDYINQGDSIFLDNSQQYSDFNGPNEKSWKLQYDYDFVALGVPGLSASASYSRGKLDLTRVDPDSPGYGGWYSADGKNAKHWERDLDLQYVVQGGPAKDLSLRLRWATHRGTGGYSAVDNDIDEYRVIVDYPIDVF 422
                                    16        26  |     36        46        56        66   |     -         -     |  85||     106       116       126       136       146       156       166 |       -         -|      196       206       216       226       236       246       256       266       276       286       296       306       316       326       336       346       356       366       376       386       396       406       416      
                                                 29     36                                70                    81   86|                                                                   168                187                                                                                                                                                                                                                                           
                                                                                                                      98                                                                                                                                                                                                                                                                                                                                    


Chain B from PDB  Type:PROTEIN  Length:372
 aligned with Q9I6X0_PSEAE | Q9I6X0 from UniProtKB/TrEMBL  Length:444

    Alignment length:416
                                    38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438      
         Q9I6X0_PSEAE    29 EGFIEGSSLQLLTRNYYFNHDRRHASGHDSKEWAQGFIATFQSGYTPGVVGFGVDAYGMLGLKLDGGGGTGGTSILPITSPSKEGYESGKAPDEFSSGGAALKIRAFDTELKLGDQFLSNPVVAGGESRMLPQTFRGVSLTNNSFEDLTLTAGQVSFTKYYNQSGHRRLGSYYGELPGDRDSHHLSWLGGTWGGIEGFTSSLYAAELQNVWKQYYADVDYTYEIDDNWSLNPGAHYYKTVDSGDSLLGRIDNNTYSLHFAVGYRQHTVTAVLQKVNGNTPFDYINQGDSIFLDNSQQYSDFNGPNEKSWKLQYDYDFVALGLPGLSASASYSRGKLDLTRVDPDSPGYGGWYSADGKNAKHWERDLDLQYVVQGGPAKDLSLRLRWATHRGTGGYSAVDNDIDEYRVIVDYPIDVF 444
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......eeeeeeeeeeeeeee.------.eeeeeeeeeeee........eeeeeeeeeeeee.--------------------.........eeeeeeeeeeeee..eeeeeeee..................eeeeeeeeeee..eeeeeeeeee.....------------------..eeeeeeeeee.....eeeeeeeeee...eeeeeeeeee.ee....eeeeeeeeeeeeee.........eeeeeeeeeeeee..eeeeeeeeeee..............................eeeeeeeeee.hhhh...eeeeeeeeeee.hhhhh......hhhhh.......eeeeeeeeeeee.........eeeeeeeeeeee.hhhhh...eeeeeeeeeeeeee. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3sy9 B   7 EGFIEGSSLQLLTRNYYFNHDRR------SKEWAQGFIATFQSGYTPGVVGFGVDAYGMLGLKL--------------------GYESGKAPDEFSSGGAALKIRAFDTELKLGDQFLSNPVVAGGESRMLPQTFRGVSLTNNSFEDLTLTAGQVSFTKYYN------------------DSHHLSWLGGTWGGIEGFTSSLYAAELQNVWKQYYADVDYTYEIDDNWSLNPGAHYYKTVDSGDSLLGRIDNNTYSLHFAVGYRQHTVTAVLQKVNGNTPFDYINQGDSIFLDNSQQYSDFNGPNEKSWKLQYDYDFVALGVPGLSASASYSRGKLDLTRVDPDSPGYGGWYSADGKNAKHWERDLDLQYVVQGGPAKDLSLRLRWATHRGTGGYSAVDNDIDEYRVIVDYPIDVF 422
                                    16        26  |     36        46        56        66   |     -         -    |   85||     106       116       126       136       146       156       166 |       -         -|      196       206       216       226       236       246       256       266       276       286       296       306       316       326       336       346       356       366       376       386       396       406       416      
                                                 29     36                                70                   80    86|                                                                   168                187                                                                                                                                                                                                                                           
                                                                                                                      98                                                                                                                                                                                                                                                                                                                                    


Chain C from PDB  Type:PROTEIN  Length:360
 aligned with Q9I6X0_PSEAE | Q9I6X0 from UniProtKB/TrEMBL  Length:444

    Alignment length:417
                                    37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       
         Q9I6X0_PSEAE    28 KEGFIEGSSLQLLTRNYYFNHDRRHASGHDSKEWAQGFIATFQSGYTPGVVGFGVDAYGMLGLKLDGGGGTGGTSILPITSPSKEGYESGKAPDEFSSGGAALKIRAFDTELKLGDQFLSNPVVAGGESRMLPQTFRGVSLTNNSFEDLTLTAGQVSFTKYYNQSGHRRLGSYYGELPGDRDSHHLSWLGGTWGGIEGFTSSLYAAELQNVWKQYYADVDYTYEIDDNWSLNPGAHYYKTVDSGDSLLGRIDNNTYSLHFAVGYRQHTVTAVLQKVNGNTPFDYINQGDSIFLDNSQQYSDFNGPNEKSWKLQYDYDFVALGLPGLSASASYSRGKLDLTRVDPDSPGYGGWYSADGKNAKHWERDLDLQYVVQGGPAKDLSLRLRWATHRGTGGYSAVDNDIDEYRVIVDYPIDVF 444
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ........eeeeeeeeeeeeee.-------.eeeeeeeeeeee........eeeeeeeeeeeee.----------------------------.eeeeeeeeeeeee..eeeeeeee..ee..ee..........eeeeeeee.....eeeeeeeeee...---------------------.eeeeeeeeee.-...eeeeeeeeee...eeeeeeeeee.ee....eeeeeeeeeeeeee.........eeeeeeeeeeeee..eeeeeeeeeee..............................eeeeeeeeee.hhhh...eeeeeeeeeee............hhhhh.......eeeeeeeeeeee..hhhhh..eeeeeeeeeeee.hhhhh...eeeeeeeeeeeee.. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3sy9 C   6 KEGFIEGSSLQLLTRNYYFNHDR-------SKEWAQGFIATFQSGYTPGVVGFGVDAYGMLGLKL----------------------------DEFSSGGAALKIRAFDTELKLGDQFLSNPVVAGGESRMLPQTFRGVSLTNNSFEDLTLTAGQVSFTKY---------------------SHHLSWLGGTWG-IEGFTSSLYAAELQNVWKQYYADVDYTYEIDDNWSLNPGAHYYKTVDSGDSLLGRIDNNTYSLHFAVGYRQHTVTAVLQKVNGNTPFDYINQGDSIFLDNSQQYSDFNGPNEKSWKLQYDYDFVALGVPGLSASASYSRGKLDLTRVDPDSPGYGGWYSADGKNAKHWERDLDLQYVVQGGPAKDLSLRLRWATHRGTGGYSAVDNDIDEYRVIVDYPIDVF 422
                                    15        25  |      -|       45        55        65    |    -         -         -   |   105       115       125       135       145       155       165|        -         -  |    195   | | 205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       395       405       415       
                                                 28      36                                70                           99                                                                166                   188        199 |                                                                                                                                                                                                                             
                                                                                                                                                                                                                             201                                                                                                                                                                                                                             


Chain D from PDB  Type:PROTEIN  Length:361
 aligned with Q9I6X0_PSEAE | Q9I6X0 from UniProtKB/TrEMBL  Length:444

    Alignment length:417
                                    37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       
         Q9I6X0_PSEAE    28 KEGFIEGSSLQLLTRNYYFNHDRRHASGHDSKEWAQGFIATFQSGYTPGVVGFGVDAYGMLGLKLDGGGGTGGTSILPITSPSKEGYESGKAPDEFSSGGAALKIRAFDTELKLGDQFLSNPVVAGGESRMLPQTFRGVSLTNNSFEDLTLTAGQVSFTKYYNQSGHRRLGSYYGELPGDRDSHHLSWLGGTWGGIEGFTSSLYAAELQNVWKQYYADVDYTYEIDDNWSLNPGAHYYKTVDSGDSLLGRIDNNTYSLHFAVGYRQHTVTAVLQKVNGNTPFDYINQGDSIFLDNSQQYSDFNGPNEKSWKLQYDYDFVALGLPGLSASASYSRGKLDLTRVDPDSPGYGGWYSADGKNAKHWERDLDLQYVVQGGPAKDLSLRLRWATHRGTGGYSAVDNDIDEYRVIVDYPIDVF 444
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ........eeeeeeeeeeeeee.--------.eeeeeeeeeee........eeeeeeeeeeeee.----------------------------.eeeeeeeeeeeee..eeeeeeee..ee..ee..........eeeeeeee.....eeeeeeeeee....--------------------.eeeeeeeeee......eeeeeeeee...eeeeeeeee..ee....eeeeeeeeeeeeee.........eeeeeeeeeeeee..eeeeeeeeeee..............................eeeeeeeeee.hhhh...eeeeeeeeeee.hhhhh..................eeeeeeeeeeee.........eeeeeeeeeee..hhhhh...eeeeeeeeeeeeee. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3sy9 D   6 KEGFIEGSSLQLLTRNYYFNHDR--------KEWAQGFIATFQSGYTPGVVGFGVDAYGMLGLKL----------------------------DEFSSGGAALKIRAFDTELKLGDQFLSNPVVAGGESRMLPQTFRGVSLTNNSFEDLTLTAGQVSFTKYY--------------------SHHLSWLGGTWGGIEGFTSSLYAAELQNVWKQYYADVDYTYEIDDNWSLNPGAHYYKTVDSGDSLLGRIDNNTYSLHFAVGYRQHTVTAVLQKVNGNTPFDYINQGDSIFLDNSQQYSDFNGPNEKSWKLQYDYDFVALGVPGLSASASYSRGKLDLTRVDPDSPGYGGWYSADGKNAKHWERDLDLQYVVQGGPAKDLSLRLRWATHRGTGGYSAVDNDIDEYRVIVDYPIDVF 422
                                    15        25  |      - |      45        55        65    |    -         -         -   |   105       115       125       135       145       155       165 |       -         -  |    195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       395       405       415       
                                                 28       37                               70                           99                                                                 167                  188
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 3SY9)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 3SY9)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 3SY9)

(-) Gene Ontology  (4, 4)

Asymmetric Unit(hide GO term definitions)
Chain A,B,C,D   (Q9I6X0_PSEAE | Q9I6X0)
molecular function
    GO:0015288    porin activity    Catalysis of the transfer of substances, sized less than 1000 Da, from one side of the membrane to the other. The transmembrane portions of porins consist exclusively of beta-strands which form a beta-barrel. They are found in the outer membranes of Gram-negative bacteria, mitochondria, plastids and possibly acid-fast Gram-positive bacteria.
biological process
    GO:0055085    transmembrane transport    The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other
    GO:0006810    transport    The directed movement of substances (such as macromolecules, small molecules, ions) or cellular components (such as complexes and organelles) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter, pore or motor protein.
cellular component
    GO:0016021    integral component of membrane    The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.

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  3sy9
    Family and Domain Information: ProDom | SYSTERS
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  Q9I6X0_PSEAE | Q9I6X0
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

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(-) Related Entries Specified in the PDB File

3sy7 3syb 3sys 3szd 3szv 3t0s 3t20 3t24