3SY9 - Sequence, Chains, Asymmetric and Biological Units

• Title: CRYSTAL STRUCTURE OF PSEUDOMONAS AERUGINOSA OCCD2 (OPDC)
• Keywords: BETA-BARREL, CHANNEL, BACTERIAL OUTER MEMBRANE, MEMBRANE PRO
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	3SY9	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	HISTIDINE PORIN OPDC	A	371	2874	0
2	Protein	HISTIDINE PORIN OPDC	B	372	2886	0
3	Protein	HISTIDINE PORIN OPDC	C	360	2767	0
4	Protein	HISTIDINE PORIN OPDC	D	361	2770	0
5	Ligand	HISTIDINE PORIN OPDC	A	6	0	95
6	Ligand	HISTIDINE PORIN OPDC	B	7	0	104
7	Ligand	HISTIDINE PORIN OPDC	C	5	0	62
8	Ligand	HISTIDINE PORIN OPDC	D	2	0	22
9	Water			133	0	133
total				1617	11297	416

Proteins

Unit 1	GLU 7 GLY 8 PHE 9 ILE 10 GLU 11 GLY 12 SER 13 SER 14 LEU 15 GLN 16 LEU 17 LEU 18 THR 19 ARG 20 ASN 21 TYR 22 TYR 23 PHE 24 ASN 25 HIS 26 ASP 27 ARG 28 ARG 29 SER 36 LYS 37 GLU 38 TRP 39 ALA 40 GLN 41 GLY 42 PHE 43 ILE 44 ALA 45 THR 46 PHE 47 GLN 48 SER 49 GLY 50 TYR 51 THR 52 PRO 53 GLY 54 VAL 55 VAL 56 GLY 57 PHE 58 GLY 59 VAL 60 ASP 61 ALA 62 TYR 63 GLY 64 MET 65 LEU 66 GLY 67 LEU 68 LYS 69 LEU 70 TYR 81 GLU 82 SER 83 GLY 84 LYS 85 ALA 86 PRO 98 ASP 99 GLU 100 PHE 101 SER 102 SER 103 GLY 104 GLY 105 ALA 106 ALA 107 LEU 108 LYS 109 ILE 110 ARG 111 ALA 112 PHE 113 ASP 114 THR 115 GLU 116 LEU 117 LYS 118 LEU 119 GLY 120 ASP 121 GLN 122 PHE 123 LEU 124 SER 125 ASN 126 PRO 127 VAL 128 VAL 129 ALA 130 GLY 131 GLY 132 GLU 133 SER 134 ARG 135 MET 136 LEU 137 PRO 138 GLN 139 THR 140 PHE 141 ARG 142 GLY 143 VAL 144 SER 145 LEU 146 THR 147 ASN 148 ASN 149 SER 150 PHE 151 GLU 152 ASP 153 LEU 154 THR 155 LEU 156 THR 157 ALA 158 GLY 159 GLN 160 VAL 161 SER 162 PHE 163 THR 164 LYS 165 TYR 166 TYR 167 ASN 168 ASP 187 SER 188 HIS 189 HIS 190 LEU 191 SER 192 TRP 193 LEU 194 GLY 195 GLY 196 THR 197 TRP 198 GLY 199 GLY 200 ILE 201 GLU 202 GLY 203 PHE 204 THR 205 SER 206 SER 207 LEU 208 TYR 209 ALA 210 ALA 211 GLU 212 LEU 213 GLN 214 ASN 215 VAL 216 TRP 217 LYS 218 GLN 219 TYR 220 TYR 221 ALA 222 ASP 223 VAL 224 ASP 225 TYR 226 THR 227 TYR 228 GLU 229 ILE 230 ASP 231 ASP 232 ASN 233 TRP 234 SER 235 LEU 236 ASN 237 PRO 238 GLY 239 ALA 240 HIS 241 TYR 242 TYR 243 LYS 244 THR 245 VAL 246 ASP 247 SER 248 GLY 249 ASP 250 SER 251 LEU 252 LEU 253 GLY 254 ARG 255 ILE 256 ASP 257 ASN 258 ASN 259 THR 260 TYR 261 SER 262 LEU 263 HIS 264 PHE 265 ALA 266 VAL 267 GLY 268 TYR 269 ARG 270 GLN 271 HIS 272 THR 273 VAL 274 THR 275 ALA 276 VAL 277 LEU 278 GLN 279 LYS 280 VAL 281 ASN 282 GLY 283 ASN 284 THR 285 PRO 286 PHE 287 ASP 288 TYR 289 ILE 290 ASN 291 GLN 292 GLY 293 ASP 294 SER 295 ILE 296 PHE 297 LEU 298 ASP 299 ASN 300 SER 301 GLN 302 GLN 303 TYR 304 SER 305 ASP 306 PHE 307 ASN 308 GLY 309 PRO 310 ASN 311 GLU 312 LYS 313 SER 314 TRP 315 LYS 316 LEU 317 GLN 318 TYR 319 ASP 320 TYR 321 ASP 322 PHE 323 VAL 324 ALA 325 LEU 326 GLY 327 VAL 328 PRO 329 GLY 330 LEU 331 SER 332 ALA 333 SER 334 ALA 335 SER 336 TYR 337 SER 338 ARG 339 GLY 340 LYS 341 LEU 342 ASP 343 LEU 344 THR 345 ARG 346 VAL 347 ASP 348 PRO 349 ASP 350 SER 351 PRO 352 GLY 353 TYR 354 GLY 355 GLY 356 TRP 357 TYR 358 SER 359 ALA 360 ASP 361 GLY 362 LYS 363 ASN 364 ALA 365 LYS 366 HIS 367 TRP 368 GLU 369 ARG 370 ASP 371 LEU 372 ASP 373 LEU 374 GLN 375 TYR 376 VAL 377 VAL 378 GLN 379 GLY 380 GLY 381 PRO 382 ALA 383 LYS 384 ASP 385 LEU 386 SER 387 LEU 388 ARG 389 LEU 390 ARG 391 TRP 392 ALA 393 THR 394 HIS 395 ARG 396 GLY 397 THR 398 GLY 399 GLY 400 TYR 401 SER 402 ALA 403 VAL 404 ASP 405 ASN 406 ASP 407 ILE 408 ASP 409 GLU 410 TYR 411 ARG 412 VAL 413 ILE 414 VAL 415 ASP 416 TYR 417 PRO 418 ILE 419 ASP 420 VAL 421 PHE 422
Unit 2	GLU 7 GLY 8 PHE 9 ILE 10 GLU 11 GLY 12 SER 13 SER 14 LEU 15 GLN 16 LEU 17 LEU 18 THR 19 ARG 20 ASN 21 TYR 22 TYR 23 PHE 24 ASN 25 HIS 26 ASP 27 ARG 28 ARG 29 SER 36 LYS 37 GLU 38 TRP 39 ALA 40 GLN 41 GLY 42 PHE 43 ILE 44 ALA 45 THR 46 PHE 47 GLN 48 SER 49 GLY 50 TYR 51 THR 52 PRO 53 GLY 54 VAL 55 VAL 56 GLY 57 PHE 58 GLY 59 VAL 60 ASP 61 ALA 62 TYR 63 GLY 64 MET 65 LEU 66 GLY 67 LEU 68 LYS 69 LEU 70 GLY 80 TYR 81 GLU 82 SER 83 GLY 84 LYS 85 ALA 86 PRO 98 ASP 99 GLU 100 PHE 101 SER 102 SER 103 GLY 104 GLY 105 ALA 106 ALA 107 LEU 108 LYS 109 ILE 110 ARG 111 ALA 112 PHE 113 ASP 114 THR 115 GLU 116 LEU 117 LYS 118 LEU 119 GLY 120 ASP 121 GLN 122 PHE 123 LEU 124 SER 125 ASN 126 PRO 127 VAL 128 VAL 129 ALA 130 GLY 131 GLY 132 GLU 133 SER 134 ARG 135 MET 136 LEU 137 PRO 138 GLN 139 THR 140 PHE 141 ARG 142 GLY 143 VAL 144 SER 145 LEU 146 THR 147 ASN 148 ASN 149 SER 150 PHE 151 GLU 152 ASP 153 LEU 154 THR 155 LEU 156 THR 157 ALA 158 GLY 159 GLN 160 VAL 161 SER 162 PHE 163 THR 164 LYS 165 TYR 166 TYR 167 ASN 168 ASP 187 SER 188 HIS 189 HIS 190 LEU 191 SER 192 TRP 193 LEU 194 GLY 195 GLY 196 THR 197 TRP 198 GLY 199 GLY 200 ILE 201 GLU 202 GLY 203 PHE 204 THR 205 SER 206 SER 207 LEU 208 TYR 209 ALA 210 ALA 211 GLU 212 LEU 213 GLN 214 ASN 215 VAL 216 TRP 217 LYS 218 GLN 219 TYR 220 TYR 221 ALA 222 ASP 223 VAL 224 ASP 225 TYR 226 THR 227 TYR 228 GLU 229 ILE 230 ASP 231 ASP 232 ASN 233 TRP 234 SER 235 LEU 236 ASN 237 PRO 238 GLY 239 ALA 240 HIS 241 TYR 242 TYR 243 LYS 244 THR 245 VAL 246 ASP 247 SER 248 GLY 249 ASP 250 SER 251 LEU 252 LEU 253 GLY 254 ARG 255 ILE 256 ASP 257 ASN 258 ASN 259 THR 260 TYR 261 SER 262 LEU 263 HIS 264 PHE 265 ALA 266 VAL 267 GLY 268 TYR 269 ARG 270 GLN 271 HIS 272 THR 273 VAL 274 THR 275 ALA 276 VAL 277 LEU 278 GLN 279 LYS 280 VAL 281 ASN 282 GLY 283 ASN 284 THR 285 PRO 286 PHE 287 ASP 288 TYR 289 ILE 290 ASN 291 GLN 292 GLY 293 ASP 294 SER 295 ILE 296 PHE 297 LEU 298 ASP 299 ASN 300 SER 301 GLN 302 GLN 303 TYR 304 SER 305 ASP 306 PHE 307 ASN 308 GLY 309 PRO 310 ASN 311 GLU 312 LYS 313 SER 314 TRP 315 LYS 316 LEU 317 GLN 318 TYR 319 ASP 320 TYR 321 ASP 322 PHE 323 VAL 324 ALA 325 LEU 326 GLY 327 VAL 328 PRO 329 GLY 330 LEU 331 SER 332 ALA 333 SER 334 ALA 335 SER 336 TYR 337 SER 338 ARG 339 GLY 340 LYS 341 LEU 342 ASP 343 LEU 344 THR 345 ARG 346 VAL 347 ASP 348 PRO 349 ASP 350 SER 351 PRO 352 GLY 353 TYR 354 GLY 355 GLY 356 TRP 357 TYR 358 SER 359 ALA 360 ASP 361 GLY 362 LYS 363 ASN 364 ALA 365 LYS 366 HIS 367 TRP 368 GLU 369 ARG 370 ASP 371 LEU 372 ASP 373 LEU 374 GLN 375 TYR 376 VAL 377 VAL 378 GLN 379 GLY 380 GLY 381 PRO 382 ALA 383 LYS 384 ASP 385 LEU 386 SER 387 LEU 388 ARG 389 LEU 390 ARG 391 TRP 392 ALA 393 THR 394 HIS 395 ARG 396 GLY 397 THR 398 GLY 399 GLY 400 TYR 401 SER 402 ALA 403 VAL 404 ASP 405 ASN 406 ASP 407 ILE 408 ASP 409 GLU 410 TYR 411 ARG 412 VAL 413 ILE 414 VAL 415 ASP 416 TYR 417 PRO 418 ILE 419 ASP 420 VAL 421 PHE 422
Unit 3	LYS 6 GLU 7 GLY 8 PHE 9 ILE 10 GLU 11 GLY 12 SER 13 SER 14 LEU 15 GLN 16 LEU 17 LEU 18 THR 19 ARG 20 ASN 21 TYR 22 TYR 23 PHE 24 ASN 25 HIS 26 ASP 27 ARG 28 SER 36 LYS 37 GLU 38 TRP 39 ALA 40 GLN 41 GLY 42 PHE 43 ILE 44 ALA 45 THR 46 PHE 47 GLN 48 SER 49 GLY 50 TYR 51 THR 52 PRO 53 GLY 54 VAL 55 VAL 56 GLY 57 PHE 58 GLY 59 VAL 60 ASP 61 ALA 62 TYR 63 GLY 64 MET 65 LEU 66 GLY 67 LEU 68 LYS 69 LEU 70 ASP 99 GLU 100 PHE 101 SER 102 SER 103 GLY 104 GLY 105 ALA 106 ALA 107 LEU 108 LYS 109 ILE 110 ARG 111 ALA 112 PHE 113 ASP 114 THR 115 GLU 116 LEU 117 LYS 118 LEU 119 GLY 120 ASP 121 GLN 122 PHE 123 LEU 124 SER 125 ASN 126 PRO 127 VAL 128 VAL 129 ALA 130 GLY 131 GLY 132 GLU 133 SER 134 ARG 135 MET 136 LEU 137 PRO 138 GLN 139 THR 140 PHE 141 ARG 142 GLY 143 VAL 144 SER 145 LEU 146 THR 147 ASN 148 ASN 149 SER 150 PHE 151 GLU 152 ASP 153 LEU 154 THR 155 LEU 156 THR 157 ALA 158 GLY 159 GLN 160 VAL 161 SER 162 PHE 163 THR 164 LYS 165 TYR 166 SER 188 HIS 189 HIS 190 LEU 191 SER 192 TRP 193 LEU 194 GLY 195 GLY 196 THR 197 TRP 198 GLY 199 ILE 201 GLU 202 GLY 203 PHE 204 THR 205 SER 206 SER 207 LEU 208 TYR 209 ALA 210 ALA 211 GLU 212 LEU 213 GLN 214 ASN 215 VAL 216 TRP 217 LYS 218 GLN 219 TYR 220 TYR 221 ALA 222 ASP 223 VAL 224 ASP 225 TYR 226 THR 227 TYR 228 GLU 229 ILE 230 ASP 231 ASP 232 ASN 233 TRP 234 SER 235 LEU 236 ASN 237 PRO 238 GLY 239 ALA 240 HIS 241 TYR 242 TYR 243 LYS 244 THR 245 VAL 246 ASP 247 SER 248 GLY 249 ASP 250 SER 251 LEU 252 LEU 253 GLY 254 ARG 255 ILE 256 ASP 257 ASN 258 ASN 259 THR 260 TYR 261 SER 262 LEU 263 HIS 264 PHE 265 ALA 266 VAL 267 GLY 268 TYR 269 ARG 270 GLN 271 HIS 272 THR 273 VAL 274 THR 275 ALA 276 VAL 277 LEU 278 GLN 279 LYS 280 VAL 281 ASN 282 GLY 283 ASN 284 THR 285 PRO 286 PHE 287 ASP 288 TYR 289 ILE 290 ASN 291 GLN 292 GLY 293 ASP 294 SER 295 ILE 296 PHE 297 LEU 298 ASP 299 ASN 300 SER 301 GLN 302 GLN 303 TYR 304 SER 305 ASP 306 PHE 307 ASN 308 GLY 309 PRO 310 ASN 311 GLU 312 LYS 313 SER 314 TRP 315 LYS 316 LEU 317 GLN 318 TYR 319 ASP 320 TYR 321 ASP 322 PHE 323 VAL 324 ALA 325 LEU 326 GLY 327 VAL 328 PRO 329 GLY 330 LEU 331 SER 332 ALA 333 SER 334 ALA 335 SER 336 TYR 337 SER 338 ARG 339 GLY 340 LYS 341 LEU 342 ASP 343 LEU 344 THR 345 ARG 346 VAL 347 ASP 348 PRO 349 ASP 350 SER 351 PRO 352 GLY 353 TYR 354 GLY 355 GLY 356 TRP 357 TYR 358 SER 359 ALA 360 ASP 361 GLY 362 LYS 363 ASN 364 ALA 365 LYS 366 HIS 367 TRP 368 GLU 369 ARG 370 ASP 371 LEU 372 ASP 373 LEU 374 GLN 375 TYR 376 VAL 377 VAL 378 GLN 379 GLY 380 GLY 381 PRO 382 ALA 383 LYS 384 ASP 385 LEU 386 SER 387 LEU 388 ARG 389 LEU 390 ARG 391 TRP 392 ALA 393 THR 394 HIS 395 ARG 396 GLY 397 THR 398 GLY 399 GLY 400 TYR 401 SER 402 ALA 403 VAL 404 ASP 405 ASN 406 ASP 407 ILE 408 ASP 409 GLU 410 TYR 411 ARG 412 VAL 413 ILE 414 VAL 415 ASP 416 TYR 417 PRO 418 ILE 419 ASP 420 VAL 421 PHE 422
Unit 4	LYS 6 GLU 7 GLY 8 PHE 9 ILE 10 GLU 11 GLY 12 SER 13 SER 14 LEU 15 GLN 16 LEU 17 LEU 18 THR 19 ARG 20 ASN 21 TYR 22 TYR 23 PHE 24 ASN 25 HIS 26 ASP 27 ARG 28 LYS 37 GLU 38 TRP 39 ALA 40 GLN 41 GLY 42 PHE 43 ILE 44 ALA 45 THR 46 PHE 47 GLN 48 SER 49 GLY 50 TYR 51 THR 52 PRO 53 GLY 54 VAL 55 VAL 56 GLY 57 PHE 58 GLY 59 VAL 60 ASP 61 ALA 62 TYR 63 GLY 64 MET 65 LEU 66 GLY 67 LEU 68 LYS 69 LEU 70 ASP 99 GLU 100 PHE 101 SER 102 SER 103 GLY 104 GLY 105 ALA 106 ALA 107 LEU 108 LYS 109 ILE 110 ARG 111 ALA 112 PHE 113 ASP 114 THR 115 GLU 116 LEU 117 LYS 118 LEU 119 GLY 120 ASP 121 GLN 122 PHE 123 LEU 124 SER 125 ASN 126 PRO 127 VAL 128 VAL 129 ALA 130 GLY 131 GLY 132 GLU 133 SER 134 ARG 135 MET 136 LEU 137 PRO 138 GLN 139 THR 140 PHE 141 ARG 142 GLY 143 VAL 144 SER 145 LEU 146 THR 147 ASN 148 ASN 149 SER 150 PHE 151 GLU 152 ASP 153 LEU 154 THR 155 LEU 156 THR 157 ALA 158 GLY 159 GLN 160 VAL 161 SER 162 PHE 163 THR 164 LYS 165 TYR 166 TYR 167 SER 188 HIS 189 HIS 190 LEU 191 SER 192 TRP 193 LEU 194 GLY 195 GLY 196 THR 197 TRP 198 GLY 199 GLY 200 ILE 201 GLU 202 GLY 203 PHE 204 THR 205 SER 206 SER 207 LEU 208 TYR 209 ALA 210 ALA 211 GLU 212 LEU 213 GLN 214 ASN 215 VAL 216 TRP 217 LYS 218 GLN 219 TYR 220 TYR 221 ALA 222 ASP 223 VAL 224 ASP 225 TYR 226 THR 227 TYR 228 GLU 229 ILE 230 ASP 231 ASP 232 ASN 233 TRP 234 SER 235 LEU 236 ASN 237 PRO 238 GLY 239 ALA 240 HIS 241 TYR 242 TYR 243 LYS 244 THR 245 VAL 246 ASP 247 SER 248 GLY 249 ASP 250 SER 251 LEU 252 LEU 253 GLY 254 ARG 255 ILE 256 ASP 257 ASN 258 ASN 259 THR 260 TYR 261 SER 262 LEU 263 HIS 264 PHE 265 ALA 266 VAL 267 GLY 268 TYR 269 ARG 270 GLN 271 HIS 272 THR 273 VAL 274 THR 275 ALA 276 VAL 277 LEU 278 GLN 279 LYS 280 VAL 281 ASN 282 GLY 283 ASN 284 THR 285 PRO 286 PHE 287 ASP 288 TYR 289 ILE 290 ASN 291 GLN 292 GLY 293 ASP 294 SER 295 ILE 296 PHE 297 LEU 298 ASP 299 ASN 300 SER 301 GLN 302 GLN 303 TYR 304 SER 305 ASP 306 PHE 307 ASN 308 GLY 309 PRO 310 ASN 311 GLU 312 LYS 313 SER 314 TRP 315 LYS 316 LEU 317 GLN 318 TYR 319 ASP 320 TYR 321 ASP 322 PHE 323 VAL 324 ALA 325 LEU 326 GLY 327 VAL 328 PRO 329 GLY 330 LEU 331 SER 332 ALA 333 SER 334 ALA 335 SER 336 TYR 337 SER 338 ARG 339 GLY 340 LYS 341 LEU 342 ASP 343 LEU 344 THR 345 ARG 346 VAL 347 ASP 348 PRO 349 ASP 350 SER 351 PRO 352 GLY 353 TYR 354 GLY 355 GLY 356 TRP 357 TYR 358 SER 359 ALA 360 ASP 361 GLY 362 LYS 363 ASN 364 ALA 365 LYS 366 HIS 367 TRP 368 GLU 369 ARG 370 ASP 371 LEU 372 ASP 373 LEU 374 GLN 375 TYR 376 VAL 377 VAL 378 GLN 379 GLY 380 GLY 381 PRO 382 ALA 383 LYS 384 ASP 385 LEU 386 SER 387 LEU 388 ARG 389 LEU 390 ARG 391 TRP 392 ALA 393 THR 394 HIS 395 ARG 396 GLY 397 THR 398 GLY 399 GLY 400 TYR 401 SER 402 ALA 403 VAL 404 ASP 405 ASN 406 ASP 407 ILE 408 ASP 409 GLU 410 TYR 411 ARG 412 VAL 413 ILE 414 VAL 415 ASP 416 TYR 417 PRO 418 ILE 419 ASP 420 VAL 421 PHE 422

Ligands

Unit 5	C8E 501 C8E 502 C8E 503 C8E 504 C8E 505 BOG 506
Unit 6	C8E 501 C8E 502 C8E 503 C8E 504 C8E 505 C8E 506 BOG 507
Unit 7	C8E 501 C8E 502 C8E 503 C8E 504 C8E 505
Unit 8	C8E 501 C8E 502