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(-) Description

Title :  STRUCTURE OF FRMSR
 
Authors :  S. M. Bong, Y. M. Chi
Date :  06 Apr 11  (Deposition) - 11 Apr 12  (Release) - 11 Apr 12  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.30
Chains :  Asym./Biol. Unit :  A,B
Keywords :  Frmsr, Gaf, Oxidoreductase, Sme (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  S. M. Bong, Y. M. Chi
Structure Of Frmsr
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - PUTATIVE UNCHARACTERIZED PROTEIN
    Chains: A, B
    EC Number: 1.8.4.14
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Gene: SPR0768
    Organism Scientific: STREPTOCOCCUS PNEUMONIAE
    Organism Taxid: 171101
    Strain: R6
    Synonym: FREE METHIONINE-R-SULFOXIDE REDUCTASE, FRMSR

 Structural Features

(-) Chains, Units

  12
Asymmetric/Biological Unit : AB

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 2)

Asymmetric/Biological Unit (1, 2)
No.NameCountTypeFull Name
1SME2Mod. ResidueMETHIONINE SULFOXIDE

(-) Sites  (2, 2)

Asymmetric Unit (2, 2)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREPHE A:47 , TYR A:51 , GLY A:77 , VAL A:78 , CYS A:79 , TYR A:100 , ILE A:101 , CYS A:103 , GLU A:110 , ASP A:126 , ASP A:128BINDING SITE FOR RESIDUE SME A 6888
2AC2SOFTWAREPHE B:47 , TYR B:51 , SER B:68 , ILE B:72 , GLY B:77 , VAL B:78 , CYS B:79 , TYR B:100 , ILE B:101 , GLU B:110 , ASP B:128BINDING SITE FOR RESIDUE SME B 6888

(-) SS Bonds  (2, 2)

Asymmetric/Biological Unit
No.Residues
1A:69 -A:103
2B:69 -B:103

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 3RFB)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 3RFB)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 3RFB)

(-) Exons   (0, 0)

(no "Exon" information available for 3RFB)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:160
 aligned with Q8DQA6_STRR6 | Q8DQA6 from UniProtKB/TrEMBL  Length:165

    Alignment length:160
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163
         Q8DQA6_STRR6     4 SEKQSRYQMLNEELSFLLEGETNVLANLSNASALIKSRFPNTVFAGFYLFDGKELVLGPFQGGVSCIRIALGKGVCGEAAHFQETVIVGDVTTYLNYISCDSLAKSEIVVPMMKNGQLLGVLDLDSSEIEDYDAMDRDYLEQFVAILLEKTTWDFTMFEE 163
               SCOP domains d3rfba_ A: automated matches                                                                                                                                     SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhh..eeeeeeeee...eeeeeeee......eee..hhhhhhhhhh...eee.................eeeeeeeee..eeeeeeeeee......hhhhhhhhhhhhhhhhhh.......... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3rfb A   4 SEKQSRYQMLNEELSFLLEGETNVLANLSNASALIKSRFPNTVFAGFYLFDGKELVLGPFQGGVSCIRIALGKGVCGEAAHFQETVIVGDVTTYLNYISCDSLAKSEIVVPMMKNGQLLGVLDLDSSEIEDYDAMDRDYLEQFVAILLEKTTWDFTMFEE 163
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163


Chain B from PDB  Type:PROTEIN  Length:163
 aligned with Q8DQA6_STRR6 | Q8DQA6 from UniProtKB/TrEMBL  Length:165

    Alignment length:163
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160   
         Q8DQA6_STRR6     1 MLKSEKQSRYQMLNEELSFLLEGETNVLANLSNASALIKSRFPNTVFAGFYLFDGKELVLGPFQGGVSCIRIALGKGVCGEAAHFQETVIVGDVTTYLNYISCDSLAKSEIVVPMMKNGQLLGVLDLDSSEIEDYDAMDRDYLEQFVAILLEKTTWDFTMFEE 163
               SCOP domains d3rfbb_ B: automated matches                                                                                                                                        SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhh..eeeeeeeee....eeeeeee......ee...hhhhhhhhhhh..eee.................eeeeeeeee..eeeeeeeeee......hhhhhhhhhhhhhhhhhhh...hhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3rfb B   1 MLKSEKQSRYQMLNEELSFLLEGETNVLANLSNASALIKSRFPNTVFAGFYLFDGKELVLGPFQGGVSCIRIALGKGVCGEAAHFQETVIVGDVTTYLNYISCDSLAKSEIVVPMMKNGQLLGVLDLDSSEIEDYDAMDRDYLEQFVAILLEKTTWDFTMFEE 163
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160
   Legend:   → Mismatch (orange background)
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 2)

Asymmetric/Biological Unit
(-)
Class: Alpha and beta proteins (a+b) (23004)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 3RFB)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 3RFB)

(-) Gene Ontology  (0, 0)

Asymmetric/Biological Unit(hide GO term definitions)
    (no "Gene Ontology" information available for 3RFB)

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