3R96 - JenaLib

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Title :   CRYSTAL STRUCTURE OF MICROCIN C7 SELF IMMUNITY ACETYLTRANSFERASE MCCE IN COMPLEX WITH ACETYL-COA AND AMP

Authors :   S. K. Nair, V. Agarwal

Date :   24 Mar 11 (Deposition) - 20 Apr 11 (Release) - 29 Jun 11 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   1.30

Chains :   Asym. Unit : A,B
Biol. Unit 1: A  (1x)
Biol. Unit 2: B  (1x)

Keywords :   Microcin C7, Acetyltransferase, Self Immunity, Resistance, Acetyl Coenzyme A, Transferase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   V. Agarwal, A. Metlitskaya, K. Severinov, S. K. Nair
Structural Basis For Microcin C7 Inactivation By The Mcce Acetyltransferase.
J. Biol. Chem. V. 286 21295 2011
PubMed-ID: 21507941 | Reference-DOI: 10.1074/JBC.M111.226282

Molecule 1 - MCCE PROTEIN
	Chains	:	A, B
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI
	Expression System Plasmid	:	PET28
	Expression System Strain	:	ROSETTA2(DE3)
	Expression System Taxid	:	562
	Expression System Vector Type	:	PLASMID
	Gene	:	MCCE
	Organism Scientific	:	ESCHERICHIA COLI
	Organism Taxid	:	562

		1	2
Asymmetric Unit	:	A	B
Biological Unit 1 (1x)	:	A
Biological Unit 2 (1x)	:		B

Summary Information (see also Sequences/Alignments below)

Asymmetric Unit (2, 4)

No.	Name	Count	Type	Full Name
1	ACO	2	Ligand/Ion	ACETYL COENZYME *A
2	AMP	2	Ligand/Ion	ADENOSINE MONOPHOSPHATE

Biological Unit 1 (2, 2)

No.	Name	Count	Type	Full Name
1	ACO	1	Ligand/Ion	ACETYL COENZYME *A
2	AMP	1	Ligand/Ion	ADENOSINE MONOPHOSPHATE

Biological Unit 2 (2, 2)

No.	Name	Count	Type	Full Name
1	ACO	1	Ligand/Ion	ACETYL COENZYME *A
2	AMP	1	Ligand/Ion	ADENOSINE MONOPHOSPHATE

Asymmetric Unit (4, 4)

No.	Name	Evidence	Residues	Description
1	AC1	SOFTWARE	SER A:45 , ILE A:103 , GLY A:104 , TYR A:105 , TRP A:106 , LEU A:107 , GLN A:112 , GLY A:113 , LYS A:114 , GLY A:115 , ILE A:116 , VAL A:117 , THR A:118 , LYS A:140 , ASN A:145 , LYS A:147 , SER A:148 , THR A:151 , ARG A:154 , HOH A:189 , HOH A:193 , HOH A:212 , HOH A:284 , HOH A:295 , HOH A:352 , HOH A:353 , HOH A:421 , HOH A:496 , HOH A:528 , HOH A:797 , ARG B:154 , HOH B:189 , ACO B:400	BINDING SITE FOR RESIDUE ACO A 400
2	AC2	SOFTWARE	MET A:46 , TRP A:48 , PHE A:61 , VAL A:88 , SER A:90 , ASN A:92 , GLY A:104 , TYR A:105 , TRP A:106 , HOH A:199 , HOH A:208 , HOH A:225 , HOH A:231 , HOH A:233 , HOH A:245 , HOH A:261 , HOH A:286	BINDING SITE FOR RESIDUE AMP A 500
3	AC3	SOFTWARE	HOH A:352 , ACO A:400 , SER B:45 , ILE B:103 , GLY B:104 , TYR B:105 , TRP B:106 , LEU B:107 , GLN B:112 , GLY B:113 , LYS B:114 , GLY B:115 , ILE B:116 , VAL B:117 , THR B:118 , ILE B:139 , LYS B:140 , ASN B:145 , LYS B:147 , SER B:148 , THR B:151 , ARG B:154 , HOH B:186 , HOH B:187 , HOH B:218 , HOH B:221 , HOH B:234 , HOH B:266 , HOH B:296 , HOH B:348 , HOH B:381 , HOH B:430 , HOH B:470 , HOH B:478 , AMP B:500 , HOH B:570 , HOH B:591	BINDING SITE FOR RESIDUE ACO B 400
4	AC4	SOFTWARE	MET B:46 , TRP B:48 , PHE B:61 , VAL B:88 , SER B:90 , ASN B:92 , GLY B:104 , TYR B:105 , TRP B:106 , HOH B:240 , HOH B:252 , HOH B:265 , HOH B:267 , HOH B:303 , HOH B:324 , ACO B:400 , HOH B:433 , HOH B:519 , HOH B:566 , HOH B:686	BINDING SITE FOR RESIDUE AMP B 500

(no "SS Bond" information available for 3R96)

(no "Cis Peptide Bond" information available for 3R96)

(no "SAP(SNP)/Variant" information available for 3R96)

(no "PROSITE Motif" information available for 3R96)

(no "Exon" information available for 3R96)

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
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Chain A from PDB  Type:PROTEIN  Length:180
 aligned with Q47510_ECOLX | Q47510 from UniProtKB/TrEMBL  Length:521

    Alignment length:180
                                   350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520
         Q47510_ECOLX   341 DVSLTPSGIKVNDEITLLYPALKYAEELYLLINQNKINFIKSMAWPAFVNNISDSVSFIEQSMIDNQNEKALILFIKYKTKIAGVVSFNIIDHANKTAYIGYWLGANFQGKGIVTNAINKLIQEYGDSGVIKRFVIKCIVDNKKSNATALRCGFTLEGVLQKAEILNGVSYDQNIYSKVI 520
               SCOP domains d3r96a_ A: automated matches                                                                                                                                                         SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ...ee..eee....eeee..hhhhhhhhhhhhhhhhhhhhh...hhhhh.hhhhhhhhhhhhhhhhhh...eeeeeee..eeeeeeeeeeee....eeeeeeee.hhhh..hhhhhhhhhhhhhhhh.....eeeeeee..hhhhhhhhhhh..eeeeeeeeeeee..eeeeeeeeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3r96 A   4 DVSLTPSGIKVNDEITLLYPALKYAEELYLLINQNKINFIKSMAWPAFVNNISDSVSFIEQSMIDNQNEKALILFIKYKTKIAGVVSFNIIDHANKTAYIGYWLGANFQGKGIVTNAINKLIQEYGDSGVIKRFVIKCIVDNKKSNATALRCGFTLEGVLQKAEILNGVSYDQNIYSKVI 183
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183

Chain B from PDB  Type:PROTEIN  Length:173
 aligned with Q47510_ECOLX | Q47510 from UniProtKB/TrEMBL  Length:521

    Alignment length:173
                                   357       367       377       387       397       407       417       427       437       447       457       467       477       487       497       507       517   
         Q47510_ECOLX   348 GIKVNDEITLLYPALKYAEELYLLINQNKINFIKSMAWPAFVNNISDSVSFIEQSMIDNQNEKALILFIKYKTKIAGVVSFNIIDHANKTAYIGYWLGANFQGKGIVTNAINKLIQEYGDSGVIKRFVIKCIVDNKKSNATALRCGFTLEGVLQKAEILNGVSYDQNIYSKVI 520
               SCOP domains d3r96b_ B: automated matches                                                                                                                                                  SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
           Pfam domains (1) --------------------------------------------------------------------Acetyltransf_1-3r96B01 B:79-158                                                 ------------------------- Pfam domains (1)
           Pfam domains (2) --------------------------------------------------------------------Acetyltransf_1-3r96B02 B:79-158                                                 ------------------------- Pfam domains (2)
         Sec.struct. author .ee....eeee..hhhhhhhhhhhhhhhhhhhh...hhhhhh.hhhhhhhhhhhhhhhhhh...eeeeeee..eeeeeeeeeeee....eeeeeeee.hhhh..hhhhhhhhhhhhhhhhh....eeeeeee..hhhhhhhhhhh..eeeeeeeeeeee..eeeeeeeeeee. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3r96 B  11 GIKVNDEITLLYPALKYAEELYLLINQNKINFIKSMAWPAFVNNISDSVSFIEQSMIDNQNEKALILFIKYKTKIAGVVSFNIIDHANKTAYIGYWLGANFQGKGIVTNAINKLIQEYGDSGVIKRFVIKCIVDNKKSNATALRCGFTLEGVLQKAEILNGVSYDQNIYSKVI 183
                                    20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Asymmetric Unit

Classes(

)

Folds(

)

Superfamilies( (-)

)

Families(

)

Protein Domains( (-)

)

Organisms( (-)

)

Class: Alpha and beta proteins (a+b) (23004)

Fold: Acyl-CoA N-acyltransferases (Nat) (250)

Superfamily: Acyl-CoA N-acyltransferases (Nat) (250)

Family: automated matches (63)

Protein domain: automated matches (63)

Escherichia coli [TaxId: 562] (5)

1a	d3r96a_	A:
1b	d3r96b_	B:

(no "CATH Domain" information available for 3R96)

Asymmetric Unit

Clans(

)

Families(

)

Organisms( (-)

)

Clan: Acetyltrans (109)

Family: Acetyltransf_1 (58)

Escherichia coli (5)

1a	Acetyltransf_1-3r96B01	B:79-158
1b	Acetyltransf_1-3r96B02	B:79-158

Asymmetric Unit(hide GO term definitions)

Chain A,B (Q47510_ECOLX | Q47510)


GO:0008080	N-acetyltransferase activity	Catalysis of the transfer of an acetyl group to a nitrogen atom on the acceptor molecule.
GO:0003824	catalytic activity	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO:0000166	nucleotide binding	Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.

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	3r96
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	Q47510_ECOLX \| Q47510	:	3r95 3r9e 3r9f 3r9g

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