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(-) Description

Title :  CRYSTAL STRUCTURE OF 2-AMINO-2-DESOXYISOCHORISMATE SYNTHASE (ADIC) SYNTHASE PHZE FROM BURKHOLDERIA LATA 383
 
Authors :  Q. A. Li, D. V. Mavrodi, L. S. Thomashow, M. Roessle, W. Blankenfeldt
Date :  22 Mar 11  (Deposition) - 30 Mar 11  (Release) - 01 Jun 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.90
Chains :  Asym./Biol. Unit :  A,B
Keywords :  Ammonia Channel, Chorismate, Type 1 Glutamine Amidotransferase, Phenazine Biosynthesis, Lyase, Synthase, Biosynthetic Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  Q. A. Li, D. V. Mavrodi, L. S. Thomashow, M. Roessle, W. Blankenfeldt
Ligand Binding Induces An Ammonia Channel In 2-Amino-2-Desoxyisochorismate (Adic) Synthase Phze.
J. Biol. Chem. V. 286 18213 2011
PubMed-ID: 21454481  |  Reference-DOI: 10.1074/JBC.M110.183418

(-) Compounds

Molecule 1 - ANTHRANILATE/PARA-AMINOBENZOATE SYNTHASES COMPONENT I
    Chains: A, B
    EC Number: 4.1.3.27
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET19MODTEV
    Expression System Strain: ROSETTA 2 PLYS S
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Gene: BCEP18194_B1570
    Organism Scientific: BURKHOLDERIA SP.
    Organism Taxid: 269483
    Strain: 383

 Structural Features

(-) Chains, Units

  12
Asymmetric/Biological Unit : AB

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 3R74)

(-) Sites  (0, 0)

(no "Site" information available for 3R74)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 3R74)

(-) Cis Peptide Bonds  (4, 4)

Asymmetric/Biological Unit
No.Residues
1Gln A:224 -Ser A:225
2Gly A:268 -Pro A:269
3Ser A:308 -Pro A:309
4Ser B:308 -Pro B:309

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 3R74)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 3R74)

(-) Exons   (0, 0)

(no "Exon" information available for 3R74)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:617
 aligned with Q396C7_BURL3 | Q396C7 from UniProtKB/TrEMBL  Length:643

    Alignment length:628
                                    15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       395       405       415       425       435       445       455       465       475       485       495       505       515       525       535       545       555       565       575       585       595       605       615       625        
         Q396C7_BURL3     6 NRNLFDRVLHGQAPCFALIARSTGSAGERAMIDVFAGAVSYPSSLAELPLAAPTATGADRQELLVMVPYRQLHERGFKTHDDGAPLVAITCDEHETVSAQLALAAIPDADTALGERHFDIDDEAYAEIVERVITDEIGTGAGSNFVIKRTLEGDLDDYSPAKALAVFKRLMRREVGAYWIFVIHTGERTFVGATPERHLTLHEGCATMNPISGTYRYPQSGPTIDGINAFLGDRKESDELYMVLDEELKMMARICPAGGQVTGPHLREMARLAHTEYFIVGHTEADVRDLLRETMFAPTVTGSPIESATRVIARHERAGRGYYSGIAALIGRDARGGRTLDSAILIRTAEIDRAGHVRIGVGSTLVRHSDAVSEVMETHAKVAALSNAFDPPEAGPALGQHPSVQAALRERNEGIADFWFRPYGGRQGEMADELAELSGCRALIVDAEDHFTAMIAQQLSSLGLATEVCGVHDAVDLARYDVVVMGPGPGDPSDAGDPRIARLYAWLRHLIDEGKPFMAVCLSHQILNAILGIPLVRREVPNQGIQVEIDLFGQRERVGFYNTYVAQTVRDEMDVDGVGTVAISRDPRTGEVHALRGPTFSSMQFHAESVLTVDGPRILGEAITHAIR 633
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhh.....eeeeee.........eeeeee..ee...hhhhh...........eeeeeeeehhhhhhhhh..........eeee..eeeeeehhhhhhhh......eeeeee..hhhhhhhhhhhhhhhhhhhh...eeeeeeeeeeee...hhhhhhhhhhhhhhhh....eeeeee...eeeeeee..eeeeee..eeee..eeeeee......hhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhh....eeeeeeeee...eeeeeeeeeee...hhhhhhhhh..hhhh.eehhhhhhhhhhhhh.........eeeeeee.....eeeeeee...eeeee...eeeeeeeeee....hhhhhhhhhhhhhhhhhhhhh..........hhhhhhhhhhhhhh..hhhhh..-----------.....eeeeeee...hhhhhhhhhhhhh.eeeeeee.....hhhhh.eeee...........hhhhhhhhhhhhhhhhhh..eeeehhhhhhhhhhhh..eee.......eeeeeee..eeeeeee...eee.....eeee...eeeeeee......eeeee...eeee..........hhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3r74 A   6 NRNLFDRVLHGQAPCFALIARSTGSAGERAMIDVFAGAVSYPSSLAELPLAAPTATGADRQELLVMVPYRQLHERGFKTHDDGAPLVAITCDEHETVSAQLALAAIPDADTALGERHFDIDDEAYAEIVERVITDEIGTGAGSNFVIKRTLEGDLDDYSPAKALAVFKRLMRREVGAYWIFVIHTGERTFVGATPERHLTLHEGCATMNPISGTYRYPQSGPTIDGINAFLGDRKESDELYMVLDEELKMMARICPAGGQVTGPHLREMARLAHTEYFIVGHTEADVRDLLRETMFAPTVTGSPIESATRVIARHERAGRGYYSGIAALIGRDARGGRTLDSAILIRTAEIDRAGHVRIGVGSTLVRHSDAVSEVMETHAKVAALSNAFDPPEAGPALGQHPSVQAALRERNEGIADFWFRPY-----------AELSGCRALIVDAEDHFTAMIAQQLSSLGLATEVCGVHDAVDLARYDVVVMGPGPGDPSDAGDPRIARLYAWLRHLIDEGKPFMAVCLSHQILNAILGIPLVRREVPNQGIQVEIDLFGQRERVGFYNTYVAQTVRDEMDVDGVGTVAISRDPRTGEVHALRGPTFSSMQFHAESVLTVDGPRILGEAITHAIR 633
                                    15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       395       405       415       425  |      -    |  445       455       465       475       485       495       505       515       525       535       545       555       565       575       585       595       605       615       625        
                                                                                                                                                                                                                                                                                                                                                                                                                                                                428         440                                                                                                                                                                                                 


Chain B from PDB  Type:PROTEIN  Length:616
 aligned with Q396C7_BURL3 | Q396C7 from UniProtKB/TrEMBL  Length:643

    Alignment length:629
                                    16        26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286       296       306       316       326       336       346       356       366       376       386       396       406       416       426       436       446       456       466       476       486       496       506       516       526       536       546       556       566       576       586       596       606       616       626         
         Q396C7_BURL3     7 RNLFDRVLHGQAPCFALIARSTGSAGERAMIDVFAGAVSYPSSLAELPLAAPTATGADRQELLVMVPYRQLHERGFKTHDDGAPLVAITCDEHETVSAQLALAAIPDADTALGERHFDIDDEAYAEIVERVITDEIGTGAGSNFVIKRTLEGDLDDYSPAKALAVFKRLMRREVGAYWIFVIHTGERTFVGATPERHLTLHEGCATMNPISGTYRYPQSGPTIDGINAFLGDRKESDELYMVLDEELKMMARICPAGGQVTGPHLREMARLAHTEYFIVGHTEADVRDLLRETMFAPTVTGSPIESATRVIARHERAGRGYYSGIAALIGRDARGGRTLDSAILIRTAEIDRAGHVRIGVGSTLVRHSDAVSEVMETHAKVAALSNAFDPPEAGPALGQHPSVQAALRERNEGIADFWFRPYGGRQGEMADELAELSGCRALIVDAEDHFTAMIAQQLSSLGLATEVCGVHDAVDLARYDVVVMGPGPGDPSDAGDPRIARLYAWLRHLIDEGKPFMAVCLSHQILNAILGIPLVRREVPNQGIQVEIDLFGQRERVGFYNTYVAQTVRDEMDVDGVGTVAISRDPRTGEVHALRGPTFSSMQFHAESVLTVDGPRILGEAITHAIRRE 635
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhh......eeeeee..------.eeeeee..ee...hhhhh...........eeeeeeeehhhhhhhhh..........eeee..eeeeeehhhhhhh........eeeee..hhhhhhhhhhhhhhhhhhhh...eeeeeeeeeee....hhhhhhhhhhhhhhhh....eeeeee....eeeeee..eeeeee..eeee..eeeeee......hhhhhhhhhhh...hhhhhhhhhhhhhhhhhhh....eeeeeeeee...eeeeeeeeeee...hhhhhhhhh..hhhh.eehhhhhhhhhhh...........eeeeeee.....eeeeeee...eeee....eeeeeeeeee....hhhhhhhhhhhhhhhhhh.........hhhhhhhhhhhhhhh.....hhhhh......-------......eeeeee...hhhhhhhhhhhhh..eeeeee.....hhhhh.eeee...........hhhhhhhhhhhhhhhhhh..eeeehhhhhhhhhhhh..eee.......eeeeeee..eeeeeee...eee.....eeee...eeeeeee......eeeee...eeee..........hhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3r74 B   7 RNLFDRVLHGQAPCFALIARST------AMIDVFAGAVSYPSSLAELPLAAPTATGADRQELLVMVPYRQLHERGFKTHDDGAPLVAITCDEHETVSAQLALAAIPDADTALGERHFDIDDEAYAEIVERVITDEIGTGAGSNFVIKRTLEGDLDDYSPAKALAVFKRLMRREVGAYWIFVIHTGERTFVGATPERHLTLHEGCATMNPISGTYRYPQSGPTIDGINAFLGDRKESDELYMVLDEELKMMARICPAGGQVTGPHLREMARLAHTEYFIVGHTEADVRDLLRETMFAPTVTGSPIESATRVIARHERAGRGYYSGIAALIGRDARGGRTLDSAILIRTAEIDRAGHVRIGVGSTLVRHSDAVSEVMETHAKVAALSNAFDPPEAGPALGQHPSVQAALRERNEGIADFWFRPYGGRQ-------AELSGCRALIVDAEDHFTAMIAQQLSSLGLATEVCGVHDAVDLARYDVVVMGPGPGDPSDAGDPRIARLYAWLRHLIDEGKPFMAVCLSHQILNAILGIPLVRREVPNQGIQVEIDLFGQRERVGFYNTYVAQTVRDEMDVDGVGTVAISRDPRTGEVHALRGPTFSSMQFHAESVLTVDGPRILGEAITHAIRRE 635
                                    16        26 |      36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286       296       306       316       326       336       346       356       366       376       386       396       406       416       426     |   -   |   446       456       466       476       486       496       506       516       526       536       546       556       566       576       586       596       606       616       626         
                                                28     35                                                                                                                                                                                                                                                                                                                                                                                                          432     440
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 3R74)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 3R74)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 3R74)

(-) Gene Ontology  (4, 4)

Asymmetric/Biological Unit(hide GO term definitions)
Chain A,B   (Q396C7_BURL3 | Q396C7)
molecular function
    GO:0004049    anthranilate synthase activity    Catalysis of the reaction: chorismate + L-glutamine = anthranilate + pyruvate + L-glutamate.
    GO:0016829    lyase activity    Catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring.
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.
biological process
    GO:0009058    biosynthetic process    The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones.

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  Ligands, Modified Residues, Ions
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  Sites
(no "Sites" information available for 3r74)
 
  Cis Peptide Bonds
    Gln A:224 - Ser A:225   [ RasMol ]  
    Gly A:268 - Pro A:269   [ RasMol ]  
    Ser A:308 - Pro A:309   [ RasMol ]  
    Ser B:308 - Pro B:309   [ RasMol ]  
 

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  3r74
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  Q396C7_BURL3 | Q396C7
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  4.1.3.27
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/TrEMBL
        Q396C7_BURL3 | Q396C7: 3r75 3r76

(-) Related Entries Specified in the PDB File

3r75 3r76 3r77