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(-) Description

Title :  STRUCTURE OF BACULOVIRUS SULFHYDRYL OXIDASE AC92
 
Authors :  M. Hakim, D. Fass
Date :  29 Sep 10  (Deposition) - 07 Dec 11  (Release) - 07 Dec 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.47
Chains :  Asym. Unit :  A
Biol. Unit 1:  A  (2x)
Keywords :  4-Helix Bundle, 5-Helix Bundle, Flavin Adenine Dinucleotide, Sulfhydryl Oxidase, Oxidoreductase, Viral Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  M. Hakim, A. Mandelbaum, D. Fass
Structure Of A Baculovirus Sulfhydryl Oxidase, A Highly Divergent Member Of The Erv Flavoenzyme Family.
J. Virol. V. 85 9406 2011
PubMed-ID: 21752922  |  Reference-DOI: 10.1128/JVI.05149-11

(-) Compounds

Molecule 1 - SULFHYDRYL OXIDASE
    Chains: A
    EC Number: 1.8.3.2
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET-28A
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Gene: AC92, P33
    Organism Common: ACMNPV
    Organism Scientific: AUTOGRAPHA CALIFORNICA NUCLEOPOLYHEDROVIRUS
    Organism Taxid: 46015
    Synonym: 33 KDA EARLY PROTEIN HOMOLOG, P33

 Structural Features

(-) Chains, Units

  1
Asymmetric Unit : A
Biological Unit 1 (2x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (3, 3)

Asymmetric Unit (3, 3)
No.NameCountTypeFull Name
1ACT1Ligand/IonACETATE ION
2FAD1Ligand/IonFLAVIN-ADENINE DINUCLEOTIDE
3IMD1Ligand/IonIMIDAZOLE
Biological Unit 1 (3, 6)
No.NameCountTypeFull Name
1ACT2Ligand/IonACETATE ION
2FAD2Ligand/IonFLAVIN-ADENINE DINUCLEOTIDE
3IMD2Ligand/IonIMIDAZOLE

(-) Sites  (3, 3)

Asymmetric Unit (3, 3)
No.NameEvidenceResiduesDescription
1AC1SOFTWARETYR A:18 , ILE A:109 , MET A:113 , LEU A:116 , LEU A:145BINDING SITE FOR RESIDUE IMD A 266
2AC2SOFTWAREARG A:10 , PHE A:106 , THR A:107 , ILE A:109 , TRP A:110 , HIS A:114 , PHE A:151 , MET A:157 , CYS A:158 , HIS A:161 , TYR A:162 , MET A:222 , HIS A:225 , ASN A:226 , ILE A:228 , ASN A:229 , LYS A:232 , GLN A:235 , ARG A:236 , MET A:247 , TYR A:252 , HOH A:270 , HOH A:275 , HOH A:279 , HOH A:285 , HOH A:306 , HOH A:357 , HOH A:363 , HOH A:378 , HOH A:428BINDING SITE FOR RESIDUE FAD A 334
3AC3SOFTWARETYR A:147 , VAL A:149 , ARG A:159 , TYR A:162 , MET A:163 , LYS A:166BINDING SITE FOR RESIDUE ACT A 267

(-) SS Bonds  (1, 1)

Asymmetric Unit
No.Residues
1A:155 -A:158

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 3P0K)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 3P0K)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 3P0K)

(-) Exons   (0, 0)

(no "Exon" information available for 3P0K)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:258
 aligned with FLSO_NPVAC | P41480 from UniProtKB/Swiss-Prot  Length:259

    Alignment length:258
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250        
           FLSO_NPVAC     1 MIPLTPLFSRYKDSYLLYSFRLIDLLRASKSTHLTKLLSSQATYLYHFACLMKYKDIQKYEVQQLIEWAINASPDMDLQQFRIEFMDKTTELNLRSCQPKSFTYTFTTIWDTMHFLSLIIDDMVYTRDKSSLDFVMQQLKTMKVLFYNVFFILQCAMCRDHYMNVKGFIIYHIELIEIALDKEKYGTDITFVDSYQQETAGADVAVVSNNMLMKNLMAYVSMTFHNHINDYKWIQRNKKPPAHYERMTWGEYKKLLNL 258
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ....hhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhh.hhhhh......hhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....eee.hhhhhhhhhh.......eee.hhhhhhhhhhhhhhhhhhhhhh...........hhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3p0k A   1 GIPLTPLFSRYKDSYLLYSFRLIDLLRASKSTHLTKLLSSQATYLYHFACLMKYKDIQKYEVQQLIEWAINASPDMDLQQFRIEFMDKTTELNLRSCQPKSFTYTFTTIWDTMHFLSLIIDDMVYTRDKSSLDFVMQQLKTMKVLFYNVFFILQCAMCRDHYMNVKGFIIYHIELIEIALDKEKYGTDITFVDSYQQETAGADVAVVSNNMLMKNLMAYVSMTFHNHINDYKWIQRNKKPPAHYERMTWGEYKKLLNL 258
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 3P0K)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 3P0K)

(-) Pfam Domains  (0, 0)

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(-) Gene Ontology  (0, 0)

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        FLSO_NPVAC | P41480: 3qzy

(-) Related Entries Specified in the PDB File

3gwl AFRICAN SWINE FEVER VIRUS SULFHYDRYL OXIDASE PB119L
3gwn MIMIVIRUS SULFHYDRYL OXIDASE R596