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(-) Description

Title :  CRYSTAL STRUCTURE OF THE FIMD TRANSLOCATION DOMAIN
 
Authors :  T. Wang, H. Li
Date :  17 Aug 10  (Deposition) - 01 Jun 11  (Release) - 28 Mar 12  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  3.01
Chains :  Asym. Unit :  A,B
Biol. Unit 1:  A,B  (1x)
Biol. Unit 2:  A (1x),B (1x)
Biol. Unit 3:  A (1x),B (1x)
Keywords :  Beta-Barrel, Protein Translocation, Outer Membrane, Membrane Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  G. Phan, H. Remaut, T. Wang, W. J. Allen, K. F. Pirker, A. Lebedev, N. S. Henderson, S. Geibel, E. Volkan, J. Yan, M. B. Kunze, J. S. Pinkner B. Ford, C. W. Kay, H. Li, S. J. Hultgren, D. G. Thanassi, G. Waksman
Crystal Structure Of The Fimd Usher Bound To Its Cognate Fimc-Fimh Substrate.
Nature V. 474 49 2011
PubMed-ID: 21637253  |  Reference-DOI: 10.1038/NATURE10109

(-) Compounds

Molecule 1 - OUTER MEMBRANE USHER PROTEIN FIMD
    Chains: A, B
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PNH297
    Expression System Strain: B TUNER
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Fragment: TRANSLOCATION DOMAIN (UNP RESIDUES 169-708)
    Gene: FIMD
    Organism Scientific: ESCHERICHIA COLI
    Organism Taxid: 562

 Structural Features

(-) Chains, Units

  12
Asymmetric Unit : AB
Biological Unit 1 (1x): AB
Biological Unit 2 (1x): A (1x)B (1x)
Biological Unit 3 (1x): A (1x)B (1x)

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 3OHN)

(-) Sites  (0, 0)

(no "Site" information available for 3OHN)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 3OHN)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 3OHN)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 3OHN)

(-) PROSITE Motifs  (1, 2)

Asymmetric Unit (1, 2)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1FIMBRIAL_USHERPS01151 Fimbrial biogenesis outer membrane usher protein signature.FIMD_ECOLI325-335
 		  2A:280-290
B:280-290
Biological Unit 1 (1, 2)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1FIMBRIAL_USHERPS01151 Fimbrial biogenesis outer membrane usher protein signature.FIMD_ECOLI325-335
 		  2A:280-290
B:280-290
Biological Unit 2 (1, 2)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1FIMBRIAL_USHERPS01151 Fimbrial biogenesis outer membrane usher protein signature.FIMD_ECOLI325-335
 		  2A:280-290
B:280-290
Biological Unit 3 (1, 2)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1FIMBRIAL_USHERPS01151 Fimbrial biogenesis outer membrane usher protein signature.FIMD_ECOLI325-335
 		  2A:280-290
B:280-290

(-) Exons   (0, 0)

(no "Exon" information available for 3OHN)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:468
 aligned with C8U0R5_ECO10 | C8U0R5 from UniProtKB/TrEMBL  Length:878

    Alignment length:518
                                   193       203       213       223       233       243       253       263       273       283       293       303       313       323       333       343       353       363       373       383       393       403       413       423       433       443       453       463       473       483       493       503       513       523       533       543       553       563       573       583       593       603       613       623       633       643       653       663       673       683       693        
         C8U0R5_ECO10   184 AGLLNYNFSGNSVQNRIGGNSHYAYLNLQSGLNIGAWRLRDNTTWSYNSSDRSSGSKNKWQHINTWLERDIIPLRSRLTLGDGYTQGDIFDGINFRGAQLASDDNMLPDSQRGFAPVIHGIARGTAQVTIKQNGYDIYNSTVPPGPFTINDIYAAGNSGDLQVTIKEADGSTQIFTVPYSSVPLLQREGHTRYSITAGEYRSGNAQQEKPRFFQSTLLHGLPAGWTIYGGTQLADRYRAFNFGIGKNMGALGALSVDMTQANSTLPDDSQHDGQSVRFLYNKSLNESGTNIQLVGYRYSTSGYFNFADTTYSRMNGYNIETQDGVIQVKPKFTDYYNLAYNKRGKLQLTVTQQLGRTSTLYLSGSHQTYWGTSNVDEQFQAGLNTAFEDINWTLSYSLTKNAWQKGRDQMLALNVNIPFSHWLRSDSKSQWRHASASYSMSHDLNGRMTNLAGVYGTLLEDNNLSYSVQTGYAGGGDGNSGSTGYATLNYRGGYGNANIGYSHSDDIKQLYYGVSGGV 701
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeeeeeeeeee.....eeeeeeeeeeeee....eeeeeeeeeeee.-------.eeeeeeeeeeeee....eeeeeeeee.........eeeeeeee....----------...eeee...eeeeeee..eeeeeeee..eeee............eeeeeee....eeeeee.............eeeeeeeeeee.........eeeeeeeeee.hhh.eeeeeeeee..eeeeeeeeeeeee..eeeeeeeeeeeee.....eeeeeeeeeeeee..---....eeeeeeee.....hhhhhh...ee.----------------...ee....eeeeeeeeeeeee...eeeeeeeeeeee.....eeeeeeeeeeee....eeeeeeeeee......eeeeeeeeeeee.--------------...eeeeeeeee..eeeeeeee.eee....eeeeee.eee.......ee.eeeeeee....eeeeeeeee...eeeeeeeeeee. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3ohn A 139 AGLLNYNFSGNSVQNRIGGNSHYAYLNLQSGLNIGAWRLRDNTTWSYNSS-------NKWQHINTWLERDIIPLRSRLTLGDGYTQGDIFDGINFRGAQLASDDN----------PVIHGIARGTAQVTIKQNGYDIYNSTVPPGPFTINDIYAAGNSGDLQVTIKEADGSTQIFTVPYSSVPLLQREGHTRYSITAGEYRSGNAQQEKPRFFQSTLLHGLPAGWTIYGGTQLADRYRAFNFGIGKNMGALGALSVDMTQANSTLPDDSQHDGQSVRFLYNKSL---GTNIQLVGYRYSTSGYFNFADTTYSRMNG----------------TDYYNLAYNKRGKLQLTVTQQLGRTSTLYLSGSHQTYWGTSNVDEQFQAGLNTAFEDINWTLSYSLTKNAWQKGRDQMLALNVNIPF--------------ASASYSMSHDLNGRMTNLAGVYGTLLEDNNLSYSVQTGYAGGGDGNSGSTGYATLNYRGGYGNANIGYSHSDDIKQLYYGVSGGV 656
                                   148       158       168       178       188       198       208       218       228       238    |    -     | 258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418   |   428       438       448     |   -         -  |    478       488       498       508       518       528       538       548        |-         -   |   578       588       598       608       618       628       638       648        
                                                                           188     196                                            243        254                                                                                                                                                                     422 426                         454              471                                                                                   557            572                                                                                    


Chain A from PDB  Type:PROTEIN  Length:468
 aligned with FIMD_ECOLI | P30130 from UniProtKB/Swiss-Prot  Length:878

    Alignment length:518
                                   193       203       213       223       233       243       253       263       273       283       293       303       313       323       333       343       353       363       373       383       393       403       413       423       433       443       453       463       473       483       493       503       513       523       533       543       553       563       573       583       593       603       613       623       633       643       653       663       673       683       693        
           FIMD_ECOLI   184 AGLLNYNFSGNSVQNRIGGNSHYAYLNLQSGLNIGAWRLRDNTTWSYNSSDRSSGSKNKWQHINTWLERDIIPLRSRLTLGDGYTQGDIFDGINFRGAQLASDDNMLPDSQRGFAPVIHGIARGTAQVTIKQNGYDIYNSTVPPGPFTINDIYAAGNSGDLQVTIKEADGSTQIFTVPYSSVPLLQREGHTRYSITAGEYRSGNAQQEKTRFFQSTLLHGLPAGWTIYGGTQLADRYRAFNFGIGKNMGALGALSVDMTQANSTLPDDSQHDGQSVRFLYNKSLNESGTNIQLVGYRYSTSGYFNFADTTYSRMNGYNIETQDGVIQVKPKFTDYYNLAYNKRGKLQLTVTQQLGRTSTLYLSGSHQTYWGTSNVDEQFQAGLNTAFEDINWTLSYSLTKNAWQKGRDQMLALNVNIPFSHWLRSDSKSQWRHASASYSMSHDLNGRMTNLAGVYGTLLEDNNLSYSVQTGYAGGGDGNSGSTGYATLNYRGGYGNANIGYSHSDDIKQLYYGVSGGV 701
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeeeeeeeeee.....eeeeeeeeeeeee....eeeeeeeeeeee.-------.eeeeeeeeeeeee....eeeeeeeee.........eeeeeeee....----------...eeee...eeeeeee..eeeeeeee..eeee............eeeeeee....eeeeee.............eeeeeeeeeee.........eeeeeeeeee.hhh.eeeeeeeee..eeeeeeeeeeeee..eeeeeeeeeeeee.....eeeeeeeeeeeee..---....eeeeeeee.....hhhhhh...ee.----------------...ee....eeeeeeeeeeeee...eeeeeeeeeeee.....eeeeeeeeeeee....eeeeeeeeee......eeeeeeeeeeee.--------------...eeeeeeeee..eeeeeeee.eee....eeeeee.eee.......ee.eeeeeee....eeeeeeeee...eeeeeeeeeee. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------FIMBRIAL_US------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3ohn A 139 AGLLNYNFSGNSVQNRIGGNSHYAYLNLQSGLNIGAWRLRDNTTWSYNSS-------NKWQHINTWLERDIIPLRSRLTLGDGYTQGDIFDGINFRGAQLASDDN----------PVIHGIARGTAQVTIKQNGYDIYNSTVPPGPFTINDIYAAGNSGDLQVTIKEADGSTQIFTVPYSSVPLLQREGHTRYSITAGEYRSGNAQQEKPRFFQSTLLHGLPAGWTIYGGTQLADRYRAFNFGIGKNMGALGALSVDMTQANSTLPDDSQHDGQSVRFLYNKSL---GTNIQLVGYRYSTSGYFNFADTTYSRMNG----------------TDYYNLAYNKRGKLQLTVTQQLGRTSTLYLSGSHQTYWGTSNVDEQFQAGLNTAFEDINWTLSYSLTKNAWQKGRDQMLALNVNIPF--------------ASASYSMSHDLNGRMTNLAGVYGTLLEDNNLSYSVQTGYAGGGDGNSGSTGYATLNYRGGYGNANIGYSHSDDIKQLYYGVSGGV 656
                                   148       158       168       178       188       198       208       218       228       238    |    -     | 258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418   |   428       438       448     |   -         -  |    478       488       498       508       518       528       538       548        |-         -   |   578       588       598       608       618       628       638       648        
                                                                           188     196                                            243        254                                                                                                                                                                     422 426                         454              471                                                                                   557            572                                                                                    


Chain B from PDB  Type:PROTEIN  Length:463
 aligned with C8U0R5_ECO10 | C8U0R5 from UniProtKB/TrEMBL  Length:878

    Alignment length:521
                                   192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422       432       442       452       462       472       482       492       502       512       522       532       542       552       562       572       582       592       602       612       622       632       642       652       662       672       682       692       702 
         C8U0R5_ECO10   183 NAGLLNYNFSGNSVQNRIGGNSHYAYLNLQSGLNIGAWRLRDNTTWSYNSSDRSSGSKNKWQHINTWLERDIIPLRSRLTLGDGYTQGDIFDGINFRGAQLASDDNMLPDSQRGFAPVIHGIARGTAQVTIKQNGYDIYNSTVPPGPFTINDIYAAGNSGDLQVTIKEADGSTQIFTVPYSSVPLLQREGHTRYSITAGEYRSGNAQQEKPRFFQSTLLHGLPAGWTIYGGTQLADRYRAFNFGIGKNMGALGALSVDMTQANSTLPDDSQHDGQSVRFLYNKSLNESGTNIQLVGYRYSTSGYFNFADTTYSRMNGYNIETQDGVIQVKPKFTDYYNLAYNKRGKLQLTVTQQLGRTSTLYLSGSHQTYWGTSNVDEQFQAGLNTAFEDINWTLSYSLTKNAWQKGRDQMLALNVNIPFSHWLRSDSKSQWRHASASYSMSHDLNGRMTNLAGVYGTLLEDNNLSYSVQTGYAGGGDGNSGSTGYATLNYRGGYGNANIGYSHSDDIKQLYYGVSGGVLA 703
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
           Pfam domains (1) PapC_N-3ohnB-----    ----Usher-3ohnB01 B:163-658                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          Pfam domains (1)
           Pfam domains (2) PapC_N-3ohnB-----    ----Usher-3ohnB02 B:163-658                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          Pfam domains (2)
         Sec.struct. author ....eeeeeeeeeeee.----.eeeeeeeeeeeee..eeeeeeeeeeee..-------.eeeeeeeeeeeee....eeeeeeeee.........eeeeeeeee.------------...eeee...eeeeeee..eeeeeeee..eeee............eeeeee.....eeeeee.............eeeeeeeeee..........eeeeeeeeee....eeeeeeeeee..eeeeeeeeeee.....eeeeeeeeeeee.....eeeeeeeeeeeee.-----...eeeeeeee.....hhhhhh...ee..----------------..ee....eeeeeeeeeeee....eeeeeeeeeeee.....eeeeeeeeeeee....eeeeeeeeee.......eeeeeeeeeee.--------------...eeeeeeeee..eeeee..eeee......eeeeeeeee.......eeeeeeeee......eeeeeeeee..eeeeeeeeeeee.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3ohn B 138 NAGLLNYNFSGNSVQNR----SHYAYLNLQSGLNIGAWRLRDNTTWSYNSS-------NKWQHINTWLERDIIPLRSRLTLGDGYTQGDIFDGINFRGAQLASD------------PVIHGIARGTAQVTIKQNGYDIYNSTVPPGPFTINDIYAAGNSGDLQVTIKEADGSTQIFTVPYSSVPLLQREGHTRYSITAGEYRSGNAQQEKPRFFQSTLLHGLPAGWTIYGGTQLADRYRAFNFGIGKNMGALGALSVDMTQANSTLPDDSQHDGQSVRFLYNKS-----TNIQLVGYRYSTSGYFNFADTTYSRMNGY----------------DYYNLAYNKRGKLQLTVTQQLGRTSTLYLSGSHQTYWGTSNVDEQFQAGLNTAFEDINWTLSYSLTKNAWQKGRDQMLALNVNIPF--------------ASASYSMSHDLNGRMTNLAGVYGTLLEDNNLSYSVQTGYAGGGDGNSGSTGYATLNYRGGYGNANIGYSHSDDIKQLYYGVSGGVLA 658
                                   147      |  - |     167       177       187|      197       207       217       227       237   |     -      |257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417   |   427       437       447       | -         -    |  477       487       497       507       517       527       537       547       557         -    |  577       587       597       607       617       627       637       647       657 
                                          154  159                          188     196                                          241          254                                                                                                                                                                    421   427                         455              472                                                                                  557            572                                                                                      


Chain B from PDB  Type:PROTEIN  Length:463
 aligned with FIMD_ECOLI | P30130 from UniProtKB/Swiss-Prot  Length:878

    Alignment length:521
                                   192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422       432       442       452       462       472       482       492       502       512       522       532       542       552       562       572       582       592       602       612       622       632       642       652       662       672       682       692       702 
           FIMD_ECOLI   183 NAGLLNYNFSGNSVQNRIGGNSHYAYLNLQSGLNIGAWRLRDNTTWSYNSSDRSSGSKNKWQHINTWLERDIIPLRSRLTLGDGYTQGDIFDGINFRGAQLASDDNMLPDSQRGFAPVIHGIARGTAQVTIKQNGYDIYNSTVPPGPFTINDIYAAGNSGDLQVTIKEADGSTQIFTVPYSSVPLLQREGHTRYSITAGEYRSGNAQQEKTRFFQSTLLHGLPAGWTIYGGTQLADRYRAFNFGIGKNMGALGALSVDMTQANSTLPDDSQHDGQSVRFLYNKSLNESGTNIQLVGYRYSTSGYFNFADTTYSRMNGYNIETQDGVIQVKPKFTDYYNLAYNKRGKLQLTVTQQLGRTSTLYLSGSHQTYWGTSNVDEQFQAGLNTAFEDINWTLSYSLTKNAWQKGRDQMLALNVNIPFSHWLRSDSKSQWRHASASYSMSHDLNGRMTNLAGVYGTLLEDNNLSYSVQTGYAGGGDGNSGSTGYATLNYRGGYGNANIGYSHSDDIKQLYYGVSGGVLA 703
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
           Pfam domains (1) PapC_N-3ohnB-----    ----Usher-3ohnB01 B:163-658                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          Pfam domains (1)
           Pfam domains (2) PapC_N-3ohnB-----    ----Usher-3ohnB02 B:163-658                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          Pfam domains (2)
         Sec.struct. author ....eeeeeeeeeeee.----.eeeeeeeeeeeee..eeeeeeeeeeee..-------.eeeeeeeeeeeee....eeeeeeeee.........eeeeeeeee.------------...eeee...eeeeeee..eeeeeeee..eeee............eeeeee.....eeeeee.............eeeeeeeeee..........eeeeeeeeee....eeeeeeeeee..eeeeeeeeeee.....eeeeeeeeeeee.....eeeeeeeeeeeee.-----...eeeeeeee.....hhhhhh...ee..----------------..ee....eeeeeeeeeeee....eeeeeeeeeeee.....eeeeeeeeeeee....eeeeeeeeee.......eeeeeeeeeee.--------------...eeeeeeeee..eeeee..eeee......eeeeeeeee.......eeeeeeeee......eeeeeeeee..eeeeeeeeeeee.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------FIMBRIAL_US-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3ohn B 138 NAGLLNYNFSGNSVQNR----SHYAYLNLQSGLNIGAWRLRDNTTWSYNSS-------NKWQHINTWLERDIIPLRSRLTLGDGYTQGDIFDGINFRGAQLASD------------PVIHGIARGTAQVTIKQNGYDIYNSTVPPGPFTINDIYAAGNSGDLQVTIKEADGSTQIFTVPYSSVPLLQREGHTRYSITAGEYRSGNAQQEKPRFFQSTLLHGLPAGWTIYGGTQLADRYRAFNFGIGKNMGALGALSVDMTQANSTLPDDSQHDGQSVRFLYNKS-----TNIQLVGYRYSTSGYFNFADTTYSRMNGY----------------DYYNLAYNKRGKLQLTVTQQLGRTSTLYLSGSHQTYWGTSNVDEQFQAGLNTAFEDINWTLSYSLTKNAWQKGRDQMLALNVNIPF--------------ASASYSMSHDLNGRMTNLAGVYGTLLEDNNLSYSVQTGYAGGGDGNSGSTGYATLNYRGGYGNANIGYSHSDDIKQLYYGVSGGVLA 658
                                   147      |  - |     167       177       187|      197       207       217       227       237   |     -      |257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417   |   427       437       447       | -         -    |  477       487       497       507       517       527       537       547       557         -    |  577       587       597       607       617       627       637       647       657 
                                          154  159                          188     196                                          241          254                                                                                                                                                                    421   427                         455              472                                                                                  557            572
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 3OHN)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 3OHN)

(-) Pfam Domains  (2, 4)

Asymmetric Unit
(-)
Clan: MBB (97)
(-)
Clan: no clan defined [family: PapC_N] (4)

(-) Gene Ontology  (8, 13)

Asymmetric Unit(hide GO term definitions)
Chain A,B   (C8U0R5_ECO10 | C8U0R5)
molecular function
    GO:0005215    transporter activity    Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells.
biological process
    GO:0006810    transport    The directed movement of substances (such as macromolecules, small molecules, ions) or cellular components (such as complexes and organelles) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter, pore or motor protein.
cellular component
    GO:0009279    cell outer membrane    A lipid bilayer that forms the outermost membrane of the cell envelope; enriched in polysaccharide and protein; the outer leaflet of the membrane contains specific lipopolysaccharide structures.
    GO:0016021    integral component of membrane    The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
    GO:0016020    membrane    A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.

Chain A,B   (FIMD_ECOLI | P30130)
molecular function
    GO:0015473    fimbrial usher porin activity    A porin that acts in the assembly of fimbria together with fimbrial chaperone.
    GO:0005215    transporter activity    Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells.
biological process
    GO:0009297    pilus assembly    The assembly of a pilus, a short filamentous structure on a bacterial cell, flagella-like in structure and generally present in many copies. Pili are variously involved in transfer of nucleic acids, adherence to surfaces, and formation of pellicles. Is required for bacterial conjugation, or can play a role in adherence to surfaces (when it is called a fimbrium), and in the formation of pellicles.
    GO:0055085    transmembrane transport    The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other
    GO:0006810    transport    The directed movement of substances (such as macromolecules, small molecules, ions) or cellular components (such as complexes and organelles) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter, pore or motor protein.
cellular component
    GO:0009279    cell outer membrane    A lipid bilayer that forms the outermost membrane of the cell envelope; enriched in polysaccharide and protein; the outer leaflet of the membrane contains specific lipopolysaccharide structures.
    GO:0016021    integral component of membrane    The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
    GO:0016020    membrane    A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.

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  3ohn
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

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        FIMD_ECOLI | P30130: 1zdv 1zdx 1ze3 3bwu 3rfz 4j3o

(-) Related Entries Specified in the PDB File

3rfz