3NBA - JenaLib

Asymmetric Unit (Jmol Viewer)

Asym. Unit - sites (Jmol Viewer)

Biological Unit 1 (Jmol Viewer)

Biol. Unit 1 - sites (Jmol Viewer)

Biological Unit 2 (Jmol Viewer)

Title :   PHOSPHOPANTETHEINE ADENYLYLTRANFERASE FROM MYCOBACTERIUM TUBERCULOSIS IN COMPLEX WITH ADENOSINE-5'-[(ALPHA,BETA)-METHYLENO]TRIPHOSPHATE (AMPCPP)

Authors :   T. J. Wubben, A. D. Mesecar

Date :   03 Jun 10 (Deposition) - 15 Sep 10 (Release) - 19 Jan 11 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   2.68

Chains :   Asym. Unit : A,B,C,D
Biol. Unit 1: A,C  (3x)
Biol. Unit 2: B,D  (3x)

Keywords :   Ppat, Ampcpp, Phosphopantetheine Adenylyltransferase, Tuberculosis, Transferase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   T. J. Wubben, A. D. Mesecar
Kinetic, Thermodynamic, And Structural Insight Into The Mechanism Of Phosphopantetheine Adenylyltransferase From Mycobacterium Tuberculosis.
J. Mol. Biol. V. 404 202 2010
PubMed-ID: 20851704 | Reference-DOI: 10.1016/J.JMB.2010.09.002

Molecule 1 - PHOSPHOPANTETHEINE ADENYLYLTRANSFERASE
	Chains	:	A, B, C, D
	EC Number	:	2.7.7.3
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI
	Expression System Plasmid	:	PET15B
	Expression System Strain	:	BL21(DE3)
	Expression System Taxid	:	469008
	Expression System Vector Type	:	PLASMID
	Gene	:	COAD, KDTB, MT3043, MTCY349.22, RV2965C, U0002E
	Organism Scientific	:	MYCOBACTERIUM TUBERCULOSIS
	Organism Taxid	:	1773
	Synonym	:	PANTETHEINE-PHOSPHATE ADENYLYLTRANSFERASE, PPAT, DEPHOSPHO- COA PYROPHOSPHORYLASE

		1	2	3	4
Asymmetric Unit	:	A	B	C	D
Biological Unit 1 (3x)	:	A		C
Biological Unit 2 (3x)	:		B		D

Summary Information (see also Sequences/Alignments below)

Asymmetric Unit (2, 7)

No.	Name	Count	Type	Full Name
1	APC	4	Ligand/Ion	DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER
2	MG	3	Ligand/Ion	MAGNESIUM ION

Biological Unit 1 (1, 6)

No.	Name	Count	Type	Full Name
1	APC	6	Ligand/Ion	DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER
2	MG	-1	Ligand/Ion	MAGNESIUM ION

Biological Unit 2 (1, 6)

No.	Name	Count	Type	Full Name
1	APC	6	Ligand/Ion	DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER
2	MG	-1	Ligand/Ion	MAGNESIUM ION

Asymmetric Unit (7, 7)

No.	Name	Evidence	Residues	Description
1	AC1	SOFTWARE	SER A:9 , PHE A:10 , GLY A:16 , HIS A:17 , ILE A:20 , GLY A:88 , ARG A:90 , THR A:118 , TYR A:122 , VAL A:125 , SER A:126 , SER A:127 , SER A:128 , MG A:158 , HOH A:176 , HOH A:177 , HOH A:245 , HOH A:251 , HOH A:256 , HOH A:257	BINDING SITE FOR RESIDUE APC A 200
2	AC2	SOFTWARE	GLY B:8 , SER B:9 , PHE B:10 , GLY B:16 , HIS B:17 , ILE B:20 , LYS B:87 , GLY B:88 , ARG B:90 , THR B:118 , TYR B:122 , VAL B:125 , SER B:127 , SER B:128 , HOH B:163 , HOH B:164 , HOH B:254 , HOH B:281	BINDING SITE FOR RESIDUE APC B 200
3	AC3	SOFTWARE	HOH A:177 , APC A:200	BINDING SITE FOR RESIDUE MG A 158
4	AC4	SOFTWARE	SER C:9 , PHE C:10 , GLY C:16 , HIS C:17 , ILE C:20 , GLY C:88 , ARG C:90 , THR C:118 , TYR C:122 , VAL C:125 , SER C:126 , SER C:127 , SER C:128 , MG C:158 , HOH C:166 , HOH C:170 , HOH C:248	BINDING SITE FOR RESIDUE APC C 200
5	AC5	SOFTWARE	PRO D:7 , GLY D:8 , SER D:9 , PHE D:10 , GLY D:16 , HIS D:17 , ILE D:20 , GLY D:88 , ARG D:90 , THR D:118 , TYR D:122 , VAL D:125 , SER D:126 , SER D:127 , SER D:128 , MG D:158 , HOH D:163 , HOH D:175 , HOH D:252 , HOH D:261 , HOH D:265	BINDING SITE FOR RESIDUE APC D 200
6	AC6	SOFTWARE	APC C:200	BINDING SITE FOR RESIDUE MG C 158
7	AC7	SOFTWARE	APC D:200	BINDING SITE FOR RESIDUE MG D 158

(no "SS Bond" information available for 3NBA)

Asymmetric Unit

No.	Residues
1	Asp A:11	-	Pro A:12
2	Asp B:11	-	Pro B:12
3	Asp C:11	-	Pro C:12
4	Ala C:40	-	Lys C:41
5	Asp D:11	-	Pro D:12
6	Ala D:40	-	Lys D:41

(no "SAP(SNP)/Variant" information available for 3NBA)

(no "PROSITE Motif" information available for 3NBA)

(no "Exon" information available for 3NBA)

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:156
 aligned with COAD_MYCTO | P9WPA4 from UniProtKB/Swiss-Prot  Length:161

    Alignment length:156
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150      
           COAD_MYCTO     1 MTGAVCPGSFDPVTLGHVDIFERAAAQFDEVVVAILVNPAKTGMFDLDERIAMVKESTTHLPNLRVQVGHGLVVDFVRSCGMTAIVKGLRTGTDFEYELQMAQMNKHIAGVDTFFVATAPRYSFVSSSLAKEVAMLGGDVSELLPEPVNRRLRDRL 156
               SCOP domains d3nbaa_ A: automated matches                                                                                                                                 SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..eeeeee.....hhhhhhhhhhhhh...eeeeeee.........hhhhhhhhhhhhh.....eeeeee..hhhhhhhhh...eeeeee.hhhhhhhhhhhhhhhhhhhh.eeeeee.hhhhh..hhhhhhhhhhh...hhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3nba A   1 MTGAVCPGSFDPVTLGHVDIFERAAAQFDEVVVAILVNPAKTGMFDLDERIAMVKESTTHLPNLRVQVGHGLVVDFVRSCGMTAIVKGLRTGTDFEYELQMAQMNKHIAGVDTFFVATAPRYSFVSSSLAKEVAMLGGDVSELLPEPVNRRLRDRL 156
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150

Chain A from PDB  Type:PROTEIN  Length:156
 aligned with COAD_MYCTU | P9WPA5 from UniProtKB/Swiss-Prot  Length:161

    Alignment length:156
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150      
           COAD_MYCTU     1 MTGAVCPGSFDPVTLGHVDIFERAAAQFDEVVVAILVNPAKTGMFDLDERIAMVKESTTHLPNLRVQVGHGLVVDFVRSCGMTAIVKGLRTGTDFEYELQMAQMNKHIAGVDTFFVATAPRYSFVSSSLAKEVAMLGGDVSELLPEPVNRRLRDRL 156
               SCOP domains d3nbaa_ A: automated matches                                                                                                                                 SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..eeeeee.....hhhhhhhhhhhhh...eeeeeee.........hhhhhhhhhhhhh.....eeeeee..hhhhhhhhh...eeeeee.hhhhhhhhhhhhhhhhhhhh.eeeeee.hhhhh..hhhhhhhhhhh...hhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3nba A   1 MTGAVCPGSFDPVTLGHVDIFERAAAQFDEVVVAILVNPAKTGMFDLDERIAMVKESTTHLPNLRVQVGHGLVVDFVRSCGMTAIVKGLRTGTDFEYELQMAQMNKHIAGVDTFFVATAPRYSFVSSSLAKEVAMLGGDVSELLPEPVNRRLRDRL 156
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150

Chain B from PDB  Type:PROTEIN  Length:156
 aligned with COAD_MYCTO | P9WPA4 from UniProtKB/Swiss-Prot  Length:161

    Alignment length:156
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150      
           COAD_MYCTO     1 MTGAVCPGSFDPVTLGHVDIFERAAAQFDEVVVAILVNPAKTGMFDLDERIAMVKESTTHLPNLRVQVGHGLVVDFVRSCGMTAIVKGLRTGTDFEYELQMAQMNKHIAGVDTFFVATAPRYSFVSSSLAKEVAMLGGDVSELLPEPVNRRLRDRL 156
               SCOP domains d3nbab_ B: automated matches                                                                                                                                 SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..eeeeee.....hhhhhhhhhhhhh...eeeeeee.........hhhhhhhhhhhhh.....eeeeee..hhhhhhhhh...eeeeee.hhhhhhhhhhhhhhhhhhhh.eeeeee.hhhhh..hhhhhhhhhh....hhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3nba B   1 MTGAVCPGSFDPVTLGHVDIFERAAAQFDEVVVAILVNPAKTGMFDLDERIAMVKESTTHLPNLRVQVGHGLVVDFVRSCGMTAIVKGLRTGTDFEYELQMAQMNKHIAGVDTFFVATAPRYSFVSSSLAKEVAMLGGDVSELLPEPVNRRLRDRL 156
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150

Chain B from PDB  Type:PROTEIN  Length:156
 aligned with COAD_MYCTU | P9WPA5 from UniProtKB/Swiss-Prot  Length:161

    Alignment length:156
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150      
           COAD_MYCTU     1 MTGAVCPGSFDPVTLGHVDIFERAAAQFDEVVVAILVNPAKTGMFDLDERIAMVKESTTHLPNLRVQVGHGLVVDFVRSCGMTAIVKGLRTGTDFEYELQMAQMNKHIAGVDTFFVATAPRYSFVSSSLAKEVAMLGGDVSELLPEPVNRRLRDRL 156
               SCOP domains d3nbab_ B: automated matches                                                                                                                                 SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..eeeeee.....hhhhhhhhhhhhh...eeeeeee.........hhhhhhhhhhhhh.....eeeeee..hhhhhhhhh...eeeeee.hhhhhhhhhhhhhhhhhhhh.eeeeee.hhhhh..hhhhhhhhhh....hhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3nba B   1 MTGAVCPGSFDPVTLGHVDIFERAAAQFDEVVVAILVNPAKTGMFDLDERIAMVKESTTHLPNLRVQVGHGLVVDFVRSCGMTAIVKGLRTGTDFEYELQMAQMNKHIAGVDTFFVATAPRYSFVSSSLAKEVAMLGGDVSELLPEPVNRRLRDRL 156
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150

Chain C from PDB  Type:PROTEIN  Length:156
 aligned with COAD_MYCTO | P9WPA4 from UniProtKB/Swiss-Prot  Length:161

    Alignment length:156
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150      
           COAD_MYCTO     1 MTGAVCPGSFDPVTLGHVDIFERAAAQFDEVVVAILVNPAKTGMFDLDERIAMVKESTTHLPNLRVQVGHGLVVDFVRSCGMTAIVKGLRTGTDFEYELQMAQMNKHIAGVDTFFVATAPRYSFVSSSLAKEVAMLGGDVSELLPEPVNRRLRDRL 156
               SCOP domains d3nbac_ C: automated matches                                                                                                                                 SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..eeeeee.....hhhhhhhhhhhhh...eeeeeee.........hhhhhhhhhhhhh.....eeeeee..hhhhhhhh....eeeeee.hhhhhhhhhhhhhhhhhhhh.eeeeee.hhhhh..hhhhhhhhhhh........hhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3nba C   1 MTGAVCPGSFDPVTLGHVDIFERAAAQFDEVVVAILVNPAKTGMFDLDERIAMVKESTTHLPNLRVQVGHGLVVDFVRSCGMTAIVKGLRTGTDFEYELQMAQMNKHIAGVDTFFVATAPRYSFVSSSLAKEVAMLGGDVSELLPEPVNRRLRDRL 156
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150

Chain C from PDB  Type:PROTEIN  Length:156
 aligned with COAD_MYCTU | P9WPA5 from UniProtKB/Swiss-Prot  Length:161

    Alignment length:156
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150      
           COAD_MYCTU     1 MTGAVCPGSFDPVTLGHVDIFERAAAQFDEVVVAILVNPAKTGMFDLDERIAMVKESTTHLPNLRVQVGHGLVVDFVRSCGMTAIVKGLRTGTDFEYELQMAQMNKHIAGVDTFFVATAPRYSFVSSSLAKEVAMLGGDVSELLPEPVNRRLRDRL 156
               SCOP domains d3nbac_ C: automated matches                                                                                                                                 SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..eeeeee.....hhhhhhhhhhhhh...eeeeeee.........hhhhhhhhhhhhh.....eeeeee..hhhhhhhh....eeeeee.hhhhhhhhhhhhhhhhhhhh.eeeeee.hhhhh..hhhhhhhhhhh........hhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3nba C   1 MTGAVCPGSFDPVTLGHVDIFERAAAQFDEVVVAILVNPAKTGMFDLDERIAMVKESTTHLPNLRVQVGHGLVVDFVRSCGMTAIVKGLRTGTDFEYELQMAQMNKHIAGVDTFFVATAPRYSFVSSSLAKEVAMLGGDVSELLPEPVNRRLRDRL 156
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150

Chain D from PDB  Type:PROTEIN  Length:156
 aligned with COAD_MYCTO | P9WPA4 from UniProtKB/Swiss-Prot  Length:161

    Alignment length:156
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150      
           COAD_MYCTO     1 MTGAVCPGSFDPVTLGHVDIFERAAAQFDEVVVAILVNPAKTGMFDLDERIAMVKESTTHLPNLRVQVGHGLVVDFVRSCGMTAIVKGLRTGTDFEYELQMAQMNKHIAGVDTFFVATAPRYSFVSSSLAKEVAMLGGDVSELLPEPVNRRLRDRL 156
               SCOP domains d3nbad_ D: automated matches                                                                                                                                 SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
           Pfam domains (1) ----CTP_transf_2-3nbaD01 D:5-133                                                                                                     ----------------------- Pfam domains (1)
           Pfam domains (2) ----CTP_transf_2-3nbaD02 D:5-133                                                                                                     ----------------------- Pfam domains (2)
           Pfam domains (3) ----CTP_transf_2-3nbaD03 D:5-133                                                                                                     ----------------------- Pfam domains (3)
           Pfam domains (4) ----CTP_transf_2-3nbaD04 D:5-133                                                                                                     ----------------------- Pfam domains (4)
         Sec.struct. author ..eeeeee.....hhhhhhhhhhhhh...eeeeee..........hhhhhhhhhhhhh.....eeeee...hhhhhhhh....eeeeee.hhhhhhhhhhhhhhhhhhhh.eeeeee.hhhhh..hhhhhhhhhh....hhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3nba D   1 MTGAVCPGSFDPVTLGHVDIFERAAAQFDEVVVAILVNPAKTGMFDLDERIAMVKESTTHLPNLRVQVGHGLVVDFVRSCGMTAIVKGLRTGTDFEYELQMAQMNKHIAGVDTFFVATAPRYSFVSSSLAKEVAMLGGDVSELLPEPVNRRLRDRL 156
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150

Chain D from PDB  Type:PROTEIN  Length:156
 aligned with COAD_MYCTU | P9WPA5 from UniProtKB/Swiss-Prot  Length:161

    Alignment length:156
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150      
           COAD_MYCTU     1 MTGAVCPGSFDPVTLGHVDIFERAAAQFDEVVVAILVNPAKTGMFDLDERIAMVKESTTHLPNLRVQVGHGLVVDFVRSCGMTAIVKGLRTGTDFEYELQMAQMNKHIAGVDTFFVATAPRYSFVSSSLAKEVAMLGGDVSELLPEPVNRRLRDRL 156
               SCOP domains d3nbad_ D: automated matches                                                                                                                                 SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
           Pfam domains (1) ----CTP_transf_2-3nbaD01 D:5-133                                                                                                     ----------------------- Pfam domains (1)
           Pfam domains (2) ----CTP_transf_2-3nbaD02 D:5-133                                                                                                     ----------------------- Pfam domains (2)
           Pfam domains (3) ----CTP_transf_2-3nbaD03 D:5-133                                                                                                     ----------------------- Pfam domains (3)
           Pfam domains (4) ----CTP_transf_2-3nbaD04 D:5-133                                                                                                     ----------------------- Pfam domains (4)
         Sec.struct. author ..eeeeee.....hhhhhhhhhhhhh...eeeeee..........hhhhhhhhhhhhh.....eeeee...hhhhhhhh....eeeeee.hhhhhhhhhhhhhhhhhhhh.eeeeee.hhhhh..hhhhhhhhhh....hhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3nba D   1 MTGAVCPGSFDPVTLGHVDIFERAAAQFDEVVVAILVNPAKTGMFDLDERIAMVKESTTHLPNLRVQVGHGLVVDFVRSCGMTAIVKGLRTGTDFEYELQMAQMNKHIAGVDTFFVATAPRYSFVSSSLAKEVAMLGGDVSELLPEPVNRRLRDRL 156
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Asymmetric Unit

Classes(

)

Folds(

)

Superfamilies( (-)

)

Families(

)

Protein Domains( (-)

)

Organisms( (-)

)

Class: Alpha and beta proteins (a/b) (23833)

Fold: Adenine nucleotide alpha hydrolase-like (440)

Superfamily: Nucleotidylyl transferase (325)

Family: automated matches (67)

Protein domain: automated matches (67)

Mycobacterium tuberculosis [TaxId: 1773] (3)

1a	d3nbaa_	A:
1b	d3nbac_	C:
1c	d3nbad_	D:
1d	d3nbab_	B:

(no "CATH Domain" information available for 3NBA)

Asymmetric Unit

Clans(

)

Families(

)

Organisms( (-)

)

Clan: HUP (230)

Family: CTP_transf_2 (36)

Mycobacterium tuberculosis (5)

1a	CTP_transf_2-3nbaD01	D:5-133
1b	CTP_transf_2-3nbaD02	D:5-133
1c	CTP_transf_2-3nbaD03	D:5-133
1d	CTP_transf_2-3nbaD04	D:5-133

Asymmetric Unit(hide GO term definitions)

Chain A,B,C,D (COAD_MYCTO | P9WPA4)

molecular function
	GO:0005524	ATP binding	Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
	GO:0003824	catalytic activity	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
	GO:0000166	nucleotide binding	Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
	GO:0016779	nucleotidyltransferase activity	Catalysis of the transfer of a nucleotidyl group to a reactant.
	GO:0004595	pantetheine-phosphate adenylyltransferase activity	Catalysis of the reaction: ATP + pantetheine 4'-phosphate = 3'-dephospho-CoA + diphosphate.
	GO:0016740	transferase activity	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2.
biological process
	GO:0009058	biosynthetic process	The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones.
	GO:0015937	coenzyme A biosynthetic process	The chemical reactions and pathways resulting in the formation of coenzyme A, 3'-phosphoadenosine-(5')diphospho(4')pantatheine, an acyl carrier in many acylation and acyl-transfer reactions in which the intermediate is a thiol ester.
cellular component
	GO:0005737	cytoplasm	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.

Chain A,B,C,D (COAD_MYCTU | P9WPA5)

molecular function
	GO:0005524	ATP binding	Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
	GO:0003824	catalytic activity	Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
	GO:0000166	nucleotide binding	Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
	GO:0016779	nucleotidyltransferase activity	Catalysis of the transfer of a nucleotidyl group to a reactant.
	GO:0004595	pantetheine-phosphate adenylyltransferase activity	Catalysis of the reaction: ATP + pantetheine 4'-phosphate = 3'-dephospho-CoA + diphosphate.
	GO:0016740	transferase activity	Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2.
biological process
	GO:0009058	biosynthetic process	The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones.
	GO:0015937	coenzyme A biosynthetic process	The chemical reactions and pathways resulting in the formation of coenzyme A, 3'-phosphoadenosine-(5')diphospho(4')pantatheine, an acyl carrier in many acylation and acyl-transfer reactions in which the intermediate is a thiol ester.
	GO:0034214	protein hexamerization	The formation of a protein hexamer, a macromolecular structure consisting of six noncovalently associated identical or nonidentical subunits.
cellular component
	GO:0005737	cytoplasm	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.

Asymmetric Unit
	Complete Structure
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	Ligands, Modified Residues, Ions
		APC	[ RasMol \| Jena3D ]	+environment [ RasMol \| Jena3D ]
		MG	[ RasMol \| Jena3D ]	+environment [ RasMol \| Jena3D ]

	Sites
		AC1	[ RasMol ]	+environment [ RasMol ]
		AC2	[ RasMol ]	+environment [ RasMol ]
		AC3	[ RasMol ]	+environment [ RasMol ]
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		AC6	[ RasMol ]	+environment [ RasMol ]
		AC7	[ RasMol ]	+environment [ RasMol ]

	Cis Peptide Bonds
		Ala C:40 - Lys C:41	[ RasMol ]
		Ala D:40 - Lys D:41	[ RasMol ]
		Asp A:11 - Pro A:12	[ RasMol ]
		Asp B:11 - Pro B:12	[ RasMol ]
		Asp C:11 - Pro C:12	[ RasMol ]
		Asp D:11 - Pro D:12	[ RasMol ]

Biological Units
	Complete Structure
		Biological Unit 1	[ Jena3D ]
		Biological Unit 2	[ Jena3D ]

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	3nba
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	COAD_MYCTU \| P9WPA5
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	2.7.7.3
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Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (2, 7)

Sites (7, 7)

SS Bonds (0, 0)

Cis Peptide Bonds (6, 6)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (0, 0)

Exons (0, 0)

Sequences/Alignments

Classification and Annotation

SCOP Domains (1, 4)

CATH Domains (0, 0)

Pfam Domains (1, 4)

Gene Ontology (10, 19)

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Databases

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Related Entries

Entries Sharing at Least One Protein Chain (UniProt ID)

Related Entries Specified in the PDB File