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(-) Description

Title :  CRYSTAL STRUCTURE OF WILD TYPE ECHINT GMP COMPLEX
 
Authors :  V. Cody
Date :  17 May 10  (Deposition) - 20 Oct 10  (Release) - 08 Dec 10  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.45
Chains :  Asym. Unit :  A,B,E,F,I,J,M,N
Biol. Unit 1:  A,B  (1x)
Biol. Unit 2:  E,F  (1x)
Biol. Unit 3:  I,J  (1x)
Biol. Unit 4:  M,N  (1x)
Keywords :  Histidine Triad Nucleotide Binding Protein, Hint, Gmp, Hydrolase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  S. Bardaweel, J. Pace, T. F. Chou, V. Cody, C. R. Wagner
Probing The Impact Of The Echint C-Terminal Domain On Structure And Catalysis.
J. Mol. Biol. V. 404 627 2010
PubMed-ID: 20934431  |  Reference-DOI: 10.1016/J.JMB.2010.09.066

(-) Compounds

Molecule 1 - HIT-LIKE PROTEIN HINT
    Chains: A, B, E, F, I, J, M, N
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PB429
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Organism Scientific: ESCHERICHIA COLI
    Organism Taxid: 562
    Strain: BB2

 Structural Features

(-) Chains, Units

  12345678
Asymmetric Unit : ABEFIJMN
Biological Unit 1 (1x): AB      
Biological Unit 2 (1x):   EF    
Biological Unit 3 (1x):     IJ  
Biological Unit 4 (1x):       MN

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 33)

Asymmetric Unit (2, 33)
No.NameCountTypeFull Name
15GP8Ligand/IonGUANOSINE-5'-MONOPHOSPHATE
2EDO25Ligand/Ion1,2-ETHANEDIOL
Biological Unit 1 (2, 11)
No.NameCountTypeFull Name
15GP2Ligand/IonGUANOSINE-5'-MONOPHOSPHATE
2EDO9Ligand/Ion1,2-ETHANEDIOL
Biological Unit 2 (2, 4)
No.NameCountTypeFull Name
15GP2Ligand/IonGUANOSINE-5'-MONOPHOSPHATE
2EDO2Ligand/Ion1,2-ETHANEDIOL
Biological Unit 3 (2, 8)
No.NameCountTypeFull Name
15GP2Ligand/IonGUANOSINE-5'-MONOPHOSPHATE
2EDO6Ligand/Ion1,2-ETHANEDIOL
Biological Unit 4 (2, 10)
No.NameCountTypeFull Name
15GP2Ligand/IonGUANOSINE-5'-MONOPHOSPHATE
2EDO8Ligand/Ion1,2-ETHANEDIOL

(-) Sites  (33, 33)

Asymmetric Unit (33, 33)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREILE A:6 , PHE A:7 , ILE A:10 , PHE A:29 , ARG A:30 , ASP A:31 , ILE A:32 , LEU A:41 , ASN A:88 , GLY A:94 , GLU A:96 , VAL A:97 , HIS A:101 , HIS A:103 , HOH A:123 , HOH A:128 , HOH A:188 , HOH A:197 , HOH A:732 , HOH A:1131 , HOH J:137BINDING SITE FOR RESIDUE 5GP A 201
02AC2SOFTWAREPRO A:109 , LEU A:110 , GLY A:111 , HOH A:658 , HIS B:92 , GLY B:94 , EDO B:125BINDING SITE FOR RESIDUE EDO A 120
03AC3SOFTWAREMET A:113 , HOH A:979 , GLN B:35 , EDO B:125 , 5GP B:200BINDING SITE FOR RESIDUE EDO A 121
04AC4SOFTWAREILE A:32 , PRO A:34 , HOH A:466 , PRO I:109 , GLY I:111 , LYS J:117 , GLY J:118BINDING SITE FOR RESIDUE EDO A 122
05AC5SOFTWAREEDO A:121 , PHE B:7 , PHE B:29 , ARG B:30 , ASP B:31 , ILE B:32 , LEU B:41 , ASN B:88 , GLY B:94 , GLU B:96 , VAL B:97 , HIS B:101 , HIS B:103 , EDO B:120 , HOH B:251 , HOH B:395 , HOH B:1114 , HOH B:1135 , HOH B:1165BINDING SITE FOR RESIDUE 5GP B 200
06AC6SOFTWAREILE B:10 , SER B:17 , ASP B:18 , PHE B:29 , 5GP B:200BINDING SITE FOR RESIDUE EDO B 120
07AC7SOFTWAREPRO B:34 , PRO B:37 , THR B:38 , HIS B:39 , HOH B:243BINDING SITE FOR RESIDUE EDO B 121
08AC8SOFTWAREARG A:91 , HIS A:92 , PRO B:109 , LEU B:110 , GLY B:111 , HOH B:666 , HOH B:884BINDING SITE FOR RESIDUE EDO B 122
09AC9SOFTWAREGLN B:22 , ASP B:23 , HOH B:154 , HOH B:495 , HOH B:531BINDING SITE FOR RESIDUE EDO B 123
10BC1SOFTWAREALA B:73 , GLU B:74 , GLY B:77 , ILE B:78 , ALA B:79 , GLU B:80BINDING SITE FOR RESIDUE EDO B 124
11BC2SOFTWAREARG A:84 , GLY A:111 , PRO A:112 , MET A:113 , EDO A:120 , EDO A:121 , ASN B:88 , GLY B:93 , GLY B:94 , HOH B:404 , HOH B:697BINDING SITE FOR RESIDUE EDO B 125
12BC3SOFTWAREPHE E:7 , ILE E:10 , PHE E:29 , ARG E:30 , ASP E:31 , ILE E:32 , LEU E:41 , ASN E:88 , GLY E:94 , GLU E:96 , VAL E:97 , HIS E:101 , HIS E:103 , HOH E:123 , HOH E:127 , HOH E:140 , HOH E:152 , HOH E:574 , HOH E:800 , HOH E:891 , HOH E:993BINDING SITE FOR RESIDUE 5GP E 203
13BC4SOFTWAREPRO E:109 , LEU E:110 , GLY E:111 , HIS F:92BINDING SITE FOR RESIDUE EDO E 120
14BC5SOFTWAREPHE F:29 , ARG F:30 , ASP F:31 , ILE F:32 , LEU F:41 , ASN F:88 , GLY F:94 , GLN F:95 , GLU F:96 , VAL F:97 , HIS F:101 , HIS F:103 , HOH F:155 , HOH F:263 , HOH F:388 , HOH F:437 , HOH F:497 , HOH F:605 , HOH F:994 , HOH F:1143BINDING SITE FOR RESIDUE 5GP F 202
15BC6SOFTWAREHOH A:459 , GLU F:57BINDING SITE FOR RESIDUE EDO F 120
16BC7SOFTWAREPHE I:7 , PHE I:29 , ARG I:30 , ASP I:31 , ILE I:32 , LEU I:41 , ASN I:88 , GLY I:94 , GLN I:95 , GLU I:96 , VAL I:97 , HIS I:101 , HIS I:103 , EDO I:123 , HOH I:245 , HOH I:248 , HOH I:284 , HOH I:322 , HOH I:1007BINDING SITE FOR RESIDUE 5GP I 205
17BC8SOFTWAREPRO I:34 , PRO I:37 , THR I:38 , HIS I:39 , HOH I:487BINDING SITE FOR RESIDUE EDO I 120
18BC9SOFTWAREGLU I:74 , GLN I:75 , HOH I:642BINDING SITE FOR RESIDUE EDO I 121
19CC1SOFTWAREGLU I:57 , HOH I:608BINDING SITE FOR RESIDUE EDO I 122
20CC2SOFTWAREGLN I:35 , ASN I:88 , 5GP I:205 , HOH I:358 , HOH I:430 , MET J:113BINDING SITE FOR RESIDUE EDO I 123
21CC3SOFTWAREHIS A:116 , PHE J:7 , ILE J:10 , PHE J:29 , ARG J:30 , ASP J:31 , ILE J:32 , LEU J:41 , ASN J:88 , GLY J:94 , GLU J:96 , VAL J:97 , HIS J:101 , HIS J:103 , HOH J:130 , HOH J:327 , HOH J:354 , HOH J:360 , HOH J:553 , HOH J:603 , HOH J:1154BINDING SITE FOR RESIDUE 5GP J 204
22CC4SOFTWAREGLU J:4 , SER J:8 , ARG J:12 , ASN J:45 , HOH J:879BINDING SITE FOR RESIDUE EDO J 120
23CC5SOFTWARELEU B:119 , PRO J:34 , GLN J:35 , ALA J:36 , PRO J:37 , ARG J:108 , HOH J:573 , GLU N:3BINDING SITE FOR RESIDUE EDO J 121
24CC6SOFTWAREILE M:6 , PHE M:29 , ARG M:30 , ASP M:31 , ILE M:32 , LEU M:41 , ASN M:88 , GLY M:94 , GLN M:95 , GLU M:96 , VAL M:97 , HIS M:101 , HIS M:103 , HOH M:130 , HOH M:313 , HOH M:431 , HOH M:594 , HOH M:829 , HOH M:935 , HOH M:966 , HOH M:975BINDING SITE FOR RESIDUE 5GP M 207
25CC7SOFTWARELYS F:117 , PRO M:109 , LEU M:110 , GLY M:111 , HOH M:539 , HIS N:92BINDING SITE FOR RESIDUE EDO M 120
26CC8SOFTWAREGLN M:75 , HOH M:389 , HOH M:926BINDING SITE FOR RESIDUE EDO M 121
27CC9SOFTWAREHIS F:116 , ILE N:6 , PHE N:7 , ILE N:10 , PHE N:29 , ARG N:30 , ASP N:31 , ILE N:32 , LEU N:41 , ASN N:88 , GLY N:94 , GLN N:95 , GLU N:96 , VAL N:97 , HIS N:101 , HIS N:103 , EDO N:121 , EDO N:123 , HOH N:132 , HOH N:140 , HOH N:147 , HOH N:312 , HOH N:391 , HOH N:515 , HOH N:554 , HOH N:1163 , HOH N:1167BINDING SITE FOR RESIDUE 5GP N 206
28DC1SOFTWAREARG N:12 , ARG N:13 , GLU N:14BINDING SITE FOR RESIDUE EDO N 120
29DC2SOFTWARELYS F:117 , HOH F:518 , ARG M:84 , GLY M:111 , MET M:113 , ASN N:88 , GLY N:93 , GLY N:94 , 5GP N:206BINDING SITE FOR RESIDUE EDO N 121
30DC3SOFTWAREARG N:12 , ASN N:45 , HOH N:390 , HOH N:421BINDING SITE FOR RESIDUE EDO N 122
31DC4SOFTWAREMET J:1 , SER N:17 , ASP N:18 , ARG N:30 , 5GP N:206 , HOH N:391BINDING SITE FOR RESIDUE EDO N 123
32DC5SOFTWAREGLU B:80 , ASP B:81 , TYR N:21 , GLN N:22 , HOH N:1111BINDING SITE FOR RESIDUE EDO N 124
33DC6SOFTWAREASP N:81BINDING SITE FOR RESIDUE EDO N 125

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 3N1S)

(-) Cis Peptide Bonds  (3, 3)

Asymmetric Unit
No.Residues
1Met J:1 -Ala J:2
2Ala J:2 -Glu J:3
3Ala M:115 -His M:116

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 3N1S)

(-) PROSITE Motifs  (2, 16)

Asymmetric Unit (2, 16)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1HIT_2PS51084 HIT domain profile.HINT_ECOLI6-115
 
 
 
 
 
 
 		  8A:6-115
B:6-115
E:6-115
F:6-115
I:6-115
J:6-115
M:6-115
N:6-115
2HIT_1PS00892 HIT domain signature.HINT_ECOLI88-106
 
 
 
 
 
 
 		  8A:88-106
B:88-106
E:88-106
F:88-106
I:88-106
J:88-106
M:88-106
N:88-106
Biological Unit 1 (2, 4)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1HIT_2PS51084 HIT domain profile.HINT_ECOLI6-115
 
 
 
 
 
 
 		  2A:6-115
B:6-115
-
-
-
-
-
-
2HIT_1PS00892 HIT domain signature.HINT_ECOLI88-106
 
 
 
 
 
 
 		  2A:88-106
B:88-106
-
-
-
-
-
-
Biological Unit 2 (2, 4)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1HIT_2PS51084 HIT domain profile.HINT_ECOLI6-115
 
 
 
 
 
 
 		  2-
-
E:6-115
F:6-115
-
-
-
-
2HIT_1PS00892 HIT domain signature.HINT_ECOLI88-106
 
 
 
 
 
 
 		  2-
-
E:88-106
F:88-106
-
-
-
-
Biological Unit 3 (2, 4)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1HIT_2PS51084 HIT domain profile.HINT_ECOLI6-115
 
 
 
 
 
 
 		  2-
-
-
-
I:6-115
J:6-115
-
-
2HIT_1PS00892 HIT domain signature.HINT_ECOLI88-106
 
 
 
 
 
 
 		  2-
-
-
-
I:88-106
J:88-106
-
-
Biological Unit 4 (2, 4)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1HIT_2PS51084 HIT domain profile.HINT_ECOLI6-115
 
 
 
 
 
 
 		  2-
-
-
-
-
-
M:6-115
N:6-115
2HIT_1PS00892 HIT domain signature.HINT_ECOLI88-106
 
 
 
 
 
 
 		  2-
-
-
-
-
-
M:88-106
N:88-106

(-) Exons   (0, 0)

(no "Exon" information available for 3N1S)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:117
 aligned with HINT_ECOLI | P0ACE7 from UniProtKB/Swiss-Prot  Length:119

    Alignment length:117
                                    10        20        30        40        50        60        70        80        90       100       110       
           HINT_ECOLI     1 MAEETIFSKIIRREIPSDIVYQDDLVTAFRDISPQAPTHILIIPNILIPTVNDVSAEHEQALGRMITVAAKIAEQEGIAEDGYRLIMNTNRHGGQEVYHIHMHLLGGRPLGPMLAHK 117
               SCOP domains d3n1sa_ A: automated matches                                                                                          SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhhhh......eeee...eeeee.......eeeeeee.....hhhhhhhhhhhhhhhhhhhhhhhhhhh......eeeeeeehhhhh.......eeeee........... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (1) -----HIT_2  PDB: A:6-115 UniProt: 6-115                                                                            -- PROSITE (1)
                PROSITE (2) ---------------------------------------------------------------------------------------HIT_1  PDB: A:88-10----------- PROSITE (2)
                 Transcript --------------------------------------------------------------------------------------------------------------------- Transcript
                 3n1s A   1 MAEETIFSKIIRREIPSDIVYQDDLVTAFRDISPQAPTHILIIPNILIPTVNDVSAEHEQALGRMITVAAKIAEQEGIAEDGYRLIMNTNRHGGQEVYHIHMHLLGGRPLGPMLAHK 117
                                    10        20        30        40        50        60        70        80        90       100       110       


Chain B from PDB  Type:PROTEIN  Length:118
 aligned with HINT_ECOLI | P0ACE7 from UniProtKB/Swiss-Prot  Length:119

    Alignment length:118
                                    11        21        31        41        51        61        71        81        91       101       111        
           HINT_ECOLI     2 AEETIFSKIIRREIPSDIVYQDDLVTAFRDISPQAPTHILIIPNILIPTVNDVSAEHEQALGRMITVAAKIAEQEGIAEDGYRLIMNTNRHGGQEVYHIHMHLLGGRPLGPMLAHKGL 119
               SCOP domains d3n1sb_ B: automated matches                                                                                           SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...hhhhhhhh........ee...eeeee.......eeeeeee.....hhhhhhhhhhhhhhhhhhhhhhhhhhh......eeeeeeehhhhh.......eeeee............. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (1) ----HIT_2  PDB: B:6-115 UniProt: 6-115                                                                            ---- PROSITE (1)
                PROSITE (2) --------------------------------------------------------------------------------------HIT_1  PDB: B:88-10------------- PROSITE (2)
                 Transcript ---------------------------------------------------------------------------------------------------------------------- Transcript
                 3n1s B   2 AEETIFSKIIRREIPSDIVYQDDLVTAFRDISPQAPTHILIIPNILIPTVNDVSAEHEQALGRMITVAAKIAEQEGIAEDGYRLIMNTNRHGGQEVYHIHMHLLGGRPLGPMLAHKGL 119
                                    11        21        31        41        51        61        71        81        91       101       111        


Chain E from PDB  Type:PROTEIN  Length:115
 aligned with HINT_ECOLI | P0ACE7 from UniProtKB/Swiss-Prot  Length:119

    Alignment length:115
                                    10        20        30        40        50        60        70        80        90       100       110     
           HINT_ECOLI     1 MAEETIFSKIIRREIPSDIVYQDDLVTAFRDISPQAPTHILIIPNILIPTVNDVSAEHEQALGRMITVAAKIAEQEGIAEDGYRLIMNTNRHGGQEVYHIHMHLLGGRPLGPMLA 115
               SCOP domains d3n1se_ E: automated matches                                                                                        SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhhhh......eeee...eeeee.......eeeeeee.....hhhhhhhhhhhhhhhhhhhhhhhhhhh......eeeeeeehhhhh.......eeeee......... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (1) -----HIT_2  PDB: E:6-115 UniProt: 6-115                                                                             PROSITE (1)
                PROSITE (2) ---------------------------------------------------------------------------------------HIT_1  PDB: E:88-10--------- PROSITE (2)
                 Transcript ------------------------------------------------------------------------------------------------------------------- Transcript
                 3n1s E   1 MAEETIFSKIIRREIPSDIVYQDDLVTAFRDISPQAPTHILIIPNILIPTVNDVSAEHEQALGRMITVAAKIAEQEGIAEDGYRLIMNTNRHGGQEVYHIHMHLLGGRPLGPMLA 115
                                    10        20        30        40        50        60        70        80        90       100       110     


Chain F from PDB  Type:PROTEIN  Length:118
 aligned with HINT_ECOLI | P0ACE7 from UniProtKB/Swiss-Prot  Length:119

    Alignment length:118
                                    11        21        31        41        51        61        71        81        91       101       111        
           HINT_ECOLI     2 AEETIFSKIIRREIPSDIVYQDDLVTAFRDISPQAPTHILIIPNILIPTVNDVSAEHEQALGRMITVAAKIAEQEGIAEDGYRLIMNTNRHGGQEVYHIHMHLLGGRPLGPMLAHKGL 119
               SCOP domains d3n1sf_ F: automated matches                                                                                           SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...hhhhhhhh......eeee...eeeee.......eeeeeee.....hhhhhhhhhhhhhhhhhhhhhhhhhhh......eeeeeeehhhhh.......eeeee............. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (1) ----HIT_2  PDB: F:6-115 UniProt: 6-115                                                                            ---- PROSITE (1)
                PROSITE (2) --------------------------------------------------------------------------------------HIT_1  PDB: F:88-10------------- PROSITE (2)
                 Transcript ---------------------------------------------------------------------------------------------------------------------- Transcript
                 3n1s F   2 AEETIFSKIIRREIPSDIVYQDDLVTAFRDISPQAPTHILIIPNILIPTVNDVSAEHEQALGRMITVAAKIAEQEGIAEDGYRLIMNTNRHGGQEVYHIHMHLLGGRPLGPMLAHKGL 119
                                    11        21        31        41        51        61        71        81        91       101       111        


Chain I from PDB  Type:PROTEIN  Length:114
 aligned with HINT_ECOLI | P0ACE7 from UniProtKB/Swiss-Prot  Length:119

    Alignment length:115
                                    11        21        31        41        51        61        71        81        91       101       111     
           HINT_ECOLI     2 AEETIFSKIIRREIPSDIVYQDDLVTAFRDISPQAPTHILIIPNILIPTVNDVSAEHEQALGRMITVAAKIAEQEGIAEDGYRLIMNTNRHGGQEVYHIHMHLLGGRPLGPMLAH 116
               SCOP domains d3n1si_ I: automated matches                                                                                        SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...hhhhhhhh........ee...eeeee.......eeeeeee.....hhhhhhhhhhhhhhhhhhhhh-hhh........eeeeeeehhhhh.......eeeee.......... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (1) ----HIT_2  PDB: I:6-115 UniProt: 6-115                                                                            - PROSITE (1)
                PROSITE (2) --------------------------------------------------------------------------------------HIT_1  PDB: I:88-10---------- PROSITE (2)
                 Transcript ------------------------------------------------------------------------------------------------------------------- Transcript
                 3n1s I   2 AEETIFSKIIRREIPSDIVYQDDLVTAFRDISPQAPTHILIIPNILIPTVNDVSAEHEQALGRMITVAA-IAEQEGIAEDGYRLIMNTNRHGGQEVYHIHMHLLGGRPLGPMLAH 116
                                    11        21        31        41        51        61        |-|       81        91       101       111     
                                                                                               70 |                                            
                                                                                                 72                                            


Chain J from PDB  Type:PROTEIN  Length:119
 aligned with HINT_ECOLI | P0ACE7 from UniProtKB/Swiss-Prot  Length:119

    Alignment length:119
                                    10        20        30        40        50        60        70        80        90       100       110         
           HINT_ECOLI     1 MAEETIFSKIIRREIPSDIVYQDDLVTAFRDISPQAPTHILIIPNILIPTVNDVSAEHEQALGRMITVAAKIAEQEGIAEDGYRLIMNTNRHGGQEVYHIHMHLLGGRPLGPMLAHKGL 119
               SCOP domains d3n1sj_ J: automated matches                                                                                            SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhhhh......eeee...eeeee.......eeeeeee.....hhhhhhhhhhhhhhhhhhhhhhhhhhh......eeeeeeehhhhh.......eeeee............. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (1) -----HIT_2  PDB: J:6-115 UniProt: 6-115                                                                            ---- PROSITE (1)
                PROSITE (2) ---------------------------------------------------------------------------------------HIT_1  PDB: J:88-10------------- PROSITE (2)
                 Transcript ----------------------------------------------------------------------------------------------------------------------- Transcript
                 3n1s J   1 MAEETIFSKIIRREIPSDIVYQDDLVTAFRDISPQAPTHILIIPNILIPTVNDVSAEHEQALGRMITVAAKIAEQEGIAEDGYRLIMNTNRHGGQEVYHIHMHLLGGRPLGPMLAHKGL 119
                                    10        20        30        40        50        60        70        80        90       100       110         


Chain M from PDB  Type:PROTEIN  Length:115
 aligned with HINT_ECOLI | P0ACE7 from UniProtKB/Swiss-Prot  Length:119

    Alignment length:115
                                    11        21        31        41        51        61        71        81        91       101       111     
           HINT_ECOLI     2 AEETIFSKIIRREIPSDIVYQDDLVTAFRDISPQAPTHILIIPNILIPTVNDVSAEHEQALGRMITVAAKIAEQEGIAEDGYRLIMNTNRHGGQEVYHIHMHLLGGRPLGPMLAH 116
               SCOP domains d3n1sm_ M: automated matches                                                                                        SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...hhhhhhhh......eeee...eeeee.......eeeeeee.....hhhhhhhhhhhhhhhhhhhhhhhhhhh......eeeeeeehhhhh.......eeeee.......... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (1) ----HIT_2  PDB: M:6-115 UniProt: 6-115                                                                            - PROSITE (1)
                PROSITE (2) --------------------------------------------------------------------------------------HIT_1  PDB: M:88-10---------- PROSITE (2)
                 Transcript ------------------------------------------------------------------------------------------------------------------- Transcript
                 3n1s M   2 AEETIFSKIIRREIPSDIVYQDDLVTAFRDISPQAPTHILIIPNILIPTVNDVSAEHEQALGRMITVAAKIAEQEGIAEDGYRLIMNTNRHGGQEVYHIHMHLLGGRPLGPMLAH 116
                                    11        21        31        41        51        61        71        81        91       101       111     


Chain N from PDB  Type:PROTEIN  Length:115
 aligned with HINT_ECOLI | P0ACE7 from UniProtKB/Swiss-Prot  Length:119

    Alignment length:115
                                    11        21        31        41        51        61        71        81        91       101       111     
           HINT_ECOLI     2 AEETIFSKIIRREIPSDIVYQDDLVTAFRDISPQAPTHILIIPNILIPTVNDVSAEHEQALGRMITVAAKIAEQEGIAEDGYRLIMNTNRHGGQEVYHIHMHLLGGRPLGPMLAH 116
               SCOP domains d3n1sn_ N: automated matches                                                                                        SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------- CATH domains
           Pfam domains (1) ----------HIT-3n1sN01 N:12-110                                                                               ------ Pfam domains (1)
           Pfam domains (2) ----------HIT-3n1sN02 N:12-110                                                                               ------ Pfam domains (2)
           Pfam domains (3) ----------HIT-3n1sN03 N:12-110                                                                               ------ Pfam domains (3)
           Pfam domains (4) ----------HIT-3n1sN04 N:12-110                                                                               ------ Pfam domains (4)
           Pfam domains (5) ----------HIT-3n1sN05 N:12-110                                                                               ------ Pfam domains (5)
           Pfam domains (6) ----------HIT-3n1sN06 N:12-110                                                                               ------ Pfam domains (6)
           Pfam domains (7) ----------HIT-3n1sN07 N:12-110                                                                               ------ Pfam domains (7)
           Pfam domains (8) ----------HIT-3n1sN08 N:12-110                                                                               ------ Pfam domains (8)
         Sec.struct. author ...hhhhhhhh......eeee...eeeee.......eeeeeee.....hhhhhhhhhhhhhhhhhhhhhhhhhhh......eeeeeeehhhhh.......eeeee.......... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (1) ----HIT_2  PDB: N:6-115 UniProt: 6-115                                                                            - PROSITE (1)
                PROSITE (2) --------------------------------------------------------------------------------------HIT_1  PDB: N:88-10---------- PROSITE (2)
                 Transcript ------------------------------------------------------------------------------------------------------------------- Transcript
                 3n1s N   2 AEETIFSKIIRREIPSDIVYQDDLVTAFRDISPQAPTHILIIPNILIPTVNDVSAEHEQALGRMITVAAKIAEQEGIAEDGYRLIMNTNRHGGQEVYHIHMHLLGGRPLGPMLAH 116
                                    11        21        31        41        51        61        71        81        91       101       111
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 8)

Asymmetric Unit
(-)
Class: Alpha and beta proteins (a+b) (23004)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 3N1S)

(-) Pfam Domains  (1, 8)

Asymmetric Unit
(-)
Clan: HIT (23)
(-)
Family: HIT (19)
(-)
Escherichia coli (strain K12) (2)
1aHIT-3n1sN01N:12-110
1bHIT-3n1sN02N:12-110
1cHIT-3n1sN03N:12-110
1dHIT-3n1sN04N:12-110
1eHIT-3n1sN05N:12-110
1fHIT-3n1sN06N:12-110
1gHIT-3n1sN07N:12-110
1hHIT-3n1sN08N:12-110

(-) Gene Ontology  (6, 6)

Asymmetric Unit(hide GO term definitions)
Chain A,B,E,F,I,J,M,N   (HINT_ECOLI | P0ACE7)
molecular function
    GO:0043530    adenosine 5'-monophosphoramidase activity    Catalysis of the reaction: adenosine 5'-monophosphoramidate = AMP + NH2. Other substrates include AMP-morpholidate, AMP-N-alanine methyl ester and AMP-alpha-acetyl lysine methyl ester.
    GO:0003824    catalytic activity    Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
    GO:0016787    hydrolase activity    Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
    GO:0000166    nucleotide binding    Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
biological process
    GO:0055130    D-alanine catabolic process    The chemical reactions and pathways resulting in the breakdown of D-alanine, the D-enantiomer of the amino acid alanine.
cellular component
    GO:0005829    cytosol    The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        HINT_ECOLI | P0ACE7: 3n1t

(-) Related Entries Specified in the PDB File

1av5 HUMAN HINT
3n1t H101A ECHINT WITH GMP BOUND