Chain A from PDB Type:PROTEIN Length:68
aligned with HFQ_PSEAE | Q9HUM0 from UniProtKB/Swiss-Prot Length:82
Alignment length:68
12 22 32 42 52 62
HFQ_PSEAE 3 KGHSLQDPYLNTLRKERVPVSIYLVNGIKLQGQIESFDQFVILLKNTVSQMVYKHAISTVVPSRPVRL 70
SCOP domains d3m4ga_ A: Pleiotropic translational regulator Hfq SCOP domains
CATH domains -------------------------------------------------------------------- CATH domains
Pfam domains -------------------------------------------------------------------- Pfam domains
Sec.struct. author ....hhhhhhhhhhhh..eeeeee....eeeeeeeee...eeeee...eeeee...eeeeee...... Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------- Transcript
3m4g A 3 KGHSLQDPYLNTLRKERVPVSIYLVNGIKLQGQIESFDQFVILLKNTVSQMVYKAAISTVVPSRPVRL 70
12 22 32 42 52 62
Chain B from PDB Type:PROTEIN Length:69
aligned with HFQ_PSEAE | Q9HUM0 from UniProtKB/Swiss-Prot Length:82
Alignment length:69
12 22 32 42 52 62
HFQ_PSEAE 3 KGHSLQDPYLNTLRKERVPVSIYLVNGIKLQGQIESFDQFVILLKNTVSQMVYKHAISTVVPSRPVRLP 71
SCOP domains d3m4gb_ B: Pleiotropic translational regulator Hfq SCOP domains
CATH domains --------------------------------------------------------------------- CATH domains
Pfam domains --------------------------------------------------------------------- Pfam domains
Sec.struct. author ....hhhhhhhhhhhh..eeeeee....eeeeeeeee...eeeee....eeee...eeeeee....... Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------- Transcript
3m4g B 3 KGHSLQDPYLNTLRKERVPVSIYLVNGIKLQGQIESFDQFVILLKNTVSQMVYKAAISTVVPSRPVRLP 71
12 22 32 42 52 62
Chain C from PDB Type:PROTEIN Length:70
aligned with HFQ_PSEAE | Q9HUM0 from UniProtKB/Swiss-Prot Length:82
Alignment length:70
11 21 31 41 51 61 71
HFQ_PSEAE 2 SKGHSLQDPYLNTLRKERVPVSIYLVNGIKLQGQIESFDQFVILLKNTVSQMVYKHAISTVVPSRPVRLP 71
SCOP domains d3m4gc_ C: Pleiotropic translational regulator Hfq SCOP domains
CATH domains ---------------------------------------------------------------------- CATH domains
Pfam domains ---------------------------------------------------------------------- Pfam domains
Sec.struct. author .....hhhhhhhhhhhh..eeeeee....eeeeeeeee...eeeee....eeee...eeeeee....... Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------- Transcript
3m4g C 2 SKGHSLQDPYLNTLRKERVPVSIYLVNGIKLQGQIESFDQFVILLKNTVSQMVYKAAISTVVPSRPVRLP 71
11 21 31 41 51 61 71
Chain D from PDB Type:PROTEIN Length:66
aligned with HFQ_PSEAE | Q9HUM0 from UniProtKB/Swiss-Prot Length:82
Alignment length:66
15 25 35 45 55 65
HFQ_PSEAE 6 SLQDPYLNTLRKERVPVSIYLVNGIKLQGQIESFDQFVILLKNTVSQMVYKHAISTVVPSRPVRLP 71
SCOP domains d3m4gd_ D: Pleiotropic translational regulator Hfq SCOP domains
CATH domains ------------------------------------------------------------------ CATH domains
Pfam domains ------------------------------------------------------------------ Pfam domains
Sec.struct. author .hhhhhhhhhhhh..eeeeee....eeeeeeeee...eeeee....eeee...eeeeee....... Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------ SAPs(SNPs)
PROSITE ------------------------------------------------------------------ PROSITE
Transcript ------------------------------------------------------------------ Transcript
3m4g D 6 SLQDPYLNTLRKERVPVSIYLVNGIKLQGQIESFDQFVILLKNTVSQMVYKAAISTVVPSRPVRLP 71
15 25 35 45 55 65
Chain E from PDB Type:PROTEIN Length:70
aligned with HFQ_PSEAE | Q9HUM0 from UniProtKB/Swiss-Prot Length:82
Alignment length:70
12 22 32 42 52 62 72
HFQ_PSEAE 3 KGHSLQDPYLNTLRKERVPVSIYLVNGIKLQGQIESFDQFVILLKNTVSQMVYKHAISTVVPSRPVRLPS 72
SCOP domains d3m4ge_ E: Pleiotropic translational regulator Hfq SCOP domains
CATH domains ---------------------------------------------------------------------- CATH domains
Pfam domains ---------------------------------------------------------------------- Pfam domains
Sec.struct. author ....hhhhhhhhhhhh..eeeeee....eeeeeeeee...eeeee....eeee...eeeeee........ Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------- Transcript
3m4g E 3 KGHSLQDPYLNTLRKERVPVSIYLVNGIKLQGQIESFDQFVILLKNTVSQMVYKAAISTVVPSRPVRLPS 72
12 22 32 42 52 62 72
Chain F from PDB Type:PROTEIN Length:71
aligned with HFQ_PSEAE | Q9HUM0 from UniProtKB/Swiss-Prot Length:82
Alignment length:71
11 21 31 41 51 61 71
HFQ_PSEAE 2 SKGHSLQDPYLNTLRKERVPVSIYLVNGIKLQGQIESFDQFVILLKNTVSQMVYKHAISTVVPSRPVRLPS 72
SCOP domains d3m4gf_ F: Pleiotropic translational regulator Hfq SCOP domains
CATH domains ----------------------------------------------------------------------- CATH domains
Pfam domains ----------------------------------------------------------------------- Pfam domains
Sec.struct. author .....hhhhhhhhhhhh..eeeeee....eeeeeeeee...eeeee....eeee...eeeeee........ Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------- Transcript
3m4g F 2 SKGHSLQDPYLNTLRKERVPVSIYLVNGIKLQGQIESFDQFVILLKNTVSQMVYKAAISTVVPSRPVRLPS 72
11 21 31 41 51 61 71
Chain G from PDB Type:PROTEIN Length:66
aligned with HFQ_PSEAE | Q9HUM0 from UniProtKB/Swiss-Prot Length:82
Alignment length:66
14 24 34 44 54 64
HFQ_PSEAE 5 HSLQDPYLNTLRKERVPVSIYLVNGIKLQGQIESFDQFVILLKNTVSQMVYKHAISTVVPSRPVRL 70
SCOP domains d3m4gg_ G: Pleiotropic translational regulator Hfq SCOP domains
CATH domains ------------------------------------------------------------------ CATH domains
Pfam domains ------------------------------------------------------------------ Pfam domains
Sec.struct. author ..hhhhhhhhhhhh..eeeeee....eeeeeeeee...eeeee...eeeee...eeeeee...... Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------ SAPs(SNPs)
PROSITE ------------------------------------------------------------------ PROSITE
Transcript ------------------------------------------------------------------ Transcript
3m4g G 5 HSLQDPYLNTLRKERVPVSIYLVNGIKLQGQIESFDQFVILLKNTVSQMVYKAAISTVVPSRPVRL 70
14 24 34 44 54 64
Chain H from PDB Type:PROTEIN Length:69
aligned with HFQ_PSEAE | Q9HUM0 from UniProtKB/Swiss-Prot Length:82
Alignment length:69
12 22 32 42 52 62
HFQ_PSEAE 3 KGHSLQDPYLNTLRKERVPVSIYLVNGIKLQGQIESFDQFVILLKNTVSQMVYKHAISTVVPSRPVRLP 71
SCOP domains d3m4gh_ H: Pleiotropic translational regulator Hfq SCOP domains
CATH domains --------------------------------------------------------------------- CATH domains
Pfam domains --------------------------------------------------------------------- Pfam domains
Sec.struct. author ....hhhhhhhhhhhh..eeeeee....eeeeeeeee...eeeee....eeee...eeeeee....... Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------- Transcript
3m4g H 3 KGHSLQDPYLNTLRKERVPVSIYLVNGIKLQGQIESFDQFVILLKNTVSQMVYKAAISTVVPSRPVRLP 71
12 22 32 42 52 62
Chain I from PDB Type:PROTEIN Length:71
aligned with HFQ_PSEAE | Q9HUM0 from UniProtKB/Swiss-Prot Length:82
Alignment length:71
11 21 31 41 51 61 71
HFQ_PSEAE 2 SKGHSLQDPYLNTLRKERVPVSIYLVNGIKLQGQIESFDQFVILLKNTVSQMVYKHAISTVVPSRPVRLPS 72
SCOP domains d3m4gi_ I: Pleiotropic translational regulator Hfq SCOP domains
CATH domains ----------------------------------------------------------------------- CATH domains
Pfam domains ----------------------------------------------------------------------- Pfam domains
Sec.struct. author .....hhhhhhhhhhhh..eeeeee....eeeeeeeee...eeeee....eeee...eeeeee........ Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------- Transcript
3m4g I 2 SKGHSLQDPYLNTLRKERVPVSIYLVNGIKLQGQIESFDQFVILLKNTVSQMVYKAAISTVVPSRPVRLPS 72
11 21 31 41 51 61 71
Chain J from PDB Type:PROTEIN Length:68
aligned with HFQ_PSEAE | Q9HUM0 from UniProtKB/Swiss-Prot Length:82
Alignment length:68
13 23 33 43 53 63
HFQ_PSEAE 4 GHSLQDPYLNTLRKERVPVSIYLVNGIKLQGQIESFDQFVILLKNTVSQMVYKHAISTVVPSRPVRLP 71
SCOP domains d3m4gj_ J: Pleiotropic translational regulator Hfq SCOP domains
CATH domains -------------------------------------------------------------------- CATH domains
Pfam domains -------------------------------------------------------------------- Pfam domains
Sec.struct. author ...hhhhhhhhhhhh...eeeee....eeeeeeeee...eeeee...eeeee...eeeeee....... Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------- Transcript
3m4g J 4 GHSLQDPYLNTLRKERVPVSIYLVNGIKLQGQIESFDQFVILLKNTVSQMVYKAAISTVVPSRPVRLP 71
13 23 33 43 53 63
Chain K from PDB Type:PROTEIN Length:68
aligned with HFQ_PSEAE | Q9HUM0 from UniProtKB/Swiss-Prot Length:82
Alignment length:68
13 23 33 43 53 63
HFQ_PSEAE 4 GHSLQDPYLNTLRKERVPVSIYLVNGIKLQGQIESFDQFVILLKNTVSQMVYKHAISTVVPSRPVRLP 71
SCOP domains d3m4gk_ K: Pleiotropic translational regulator Hfq SCOP domains
CATH domains -------------------------------------------------------------------- CATH domains
Pfam domains -------------------------------------------------------------------- Pfam domains
Sec.struct. author ...hhhhhhhhhhhh..eeeeee....eeeeeeeee...eeeee....eeee...eeeeee....... Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------- Transcript
3m4g K 4 GHSLQDPYLNTLRKERVPVSIYLVNGIKLQGQIESFDQFVILLKNTVSQMVYKAAISTVVPSRPVRLP 71
13 23 33 43 53 63
Chain L from PDB Type:PROTEIN Length:70
aligned with HFQ_PSEAE | Q9HUM0 from UniProtKB/Swiss-Prot Length:82
Alignment length:70
11 21 31 41 51 61 71
HFQ_PSEAE 2 SKGHSLQDPYLNTLRKERVPVSIYLVNGIKLQGQIESFDQFVILLKNTVSQMVYKHAISTVVPSRPVRLP 71
SCOP domains d3m4gl_ L: Pleiotropic translational regulator Hfq SCOP domains
CATH domains ---------------------------------------------------------------------- CATH domains
Pfam domains (1) --------LSM-3m4gL01 L:10-64 ------- Pfam domains (1)
Pfam domains (2) --------LSM-3m4gL02 L:10-64 ------- Pfam domains (2)
Pfam domains (3) --------LSM-3m4gL03 L:10-64 ------- Pfam domains (3)
Pfam domains (4) --------LSM-3m4gL04 L:10-64 ------- Pfam domains (4)
Pfam domains (5) --------LSM-3m4gL05 L:10-64 ------- Pfam domains (5)
Pfam domains (6) --------LSM-3m4gL06 L:10-64 ------- Pfam domains (6)
Pfam domains (7) --------LSM-3m4gL07 L:10-64 ------- Pfam domains (7)
Pfam domains (8) --------LSM-3m4gL08 L:10-64 ------- Pfam domains (8)
Pfam domains (9) --------LSM-3m4gL09 L:10-64 ------- Pfam domains (9)
Pfam domains (10) --------LSM-3m4gL10 L:10-64 ------- Pfam domains (10)
Pfam domains (11) --------LSM-3m4gL11 L:10-64 ------- Pfam domains (11)
Pfam domains (12) --------LSM-3m4gL12 L:10-64 ------- Pfam domains (12)
Sec.struct. author .....hhhhhhhhhhhh..eeeeee....eeeeeeeee...eeeee...eeeee...eeeeee....... Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------- SAPs(SNPs)
PROSITE ---------------------------------------------------------------------- PROSITE
Transcript ---------------------------------------------------------------------- Transcript
3m4g L 2 SKGHSLQDPYLNTLRKERVPVSIYLVNGIKLQGQIESFDQFVILLKNTVSQMVYKAAISTVVPSRPVRLP 71
11 21 31 41 51 61 71
Legend: |
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(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |