Chain A from PDB Type:PROTEIN Length:192
aligned with TRMD_ANAPZ | Q2GIL5 from UniProtKB/Swiss-Prot Length:232
Alignment length:212
1
| 9 19 29 39 49 59 69 79 89 99 109 119 129 139 149 159 169 179 189 199 209
TRMD_ANAPZ - -MIFNVLTIFPQMFPGPLGVSNLGSALKKGLWTLNVFDIRAFANNKHNTVDDTPYGGGPGMLLRADVLGRCIDEVLSLHPNTKLMFTSPRGVSFTQDIARQTMNFDNITLLCGRFEGIDERVVDFYKLQEVSIGDYVLSGGELAAMVIIDTCVRMVPGVIGNAESLKQESMEGSLEYPQYTRPASWKGMEVPEVLLTGNHGEIEKWRRNASL 211
SCOP domains d3knua_ A: automated matches SCOP domains
CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .eeeeeee.hhhhhhhhhhhhhhhhhhhh..eeeeeee.hhhh-----..ee.........eehhhhhhhhhhhhhhhh...eeeee....ee.hhhhhhhhhh..eeeeee......hhhhhhhhh.eeee........hhhhhhhhhhhhhh......---------------.........ee..ee.hhhhhh.hhhhhhhhhhhhh. Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3knu A 0 SMIFNVLTIFPQMFPGPLGVSNLGSALKKGLWTLNVFDIRAFA-----TVDDTPYGGGPGMLLRADVLGRCIDEVLSLHPNTKLMFTSPRGVSFTQDIARQTMNFDNITLLCGRFEGIDERVVDFYKLQEVSIGDYVLSGGELAAMVIIDTCVRMVPGVI---------------EYPQYTRPASWKGMEVPEVLLTGNHGEIEKWRRNASL 211
9 19 29 39 | 49 59 69 79 89 99 109 119 129 139 149 159 - | 179 189 199 209
42 48 159 175
Chain B from PDB Type:PROTEIN Length:197
aligned with TRMD_ANAPZ | Q2GIL5 from UniProtKB/Swiss-Prot Length:232
Alignment length:212
1
| 9 19 29 39 49 59 69 79 89 99 109 119 129 139 149 159 169 179 189 199 209
TRMD_ANAPZ - -MIFNVLTIFPQMFPGPLGVSNLGSALKKGLWTLNVFDIRAFANNKHNTVDDTPYGGGPGMLLRADVLGRCIDEVLSLHPNTKLMFTSPRGVSFTQDIARQTMNFDNITLLCGRFEGIDERVVDFYKLQEVSIGDYVLSGGELAAMVIIDTCVRMVPGVIGNAESLKQESMEGSLEYPQYTRPASWKGMEVPEVLLTGNHGEIEKWRRNASL 211
SCOP domains d3knub_ B: automated matches SCOP domains
CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .eeeeeee.hhhhhhhhhhhhhhhhhhhh..eeeeeee.hhhh.hhhhh.ee.........eehhhhhhhhhhhhhhhh...eeeee....ee.hhhhhhhhh...eeeee.......hhhhhhhhh.eeee........hhhhhhhhhhhhhh......---------------.........ee..ee.hhhhhh.hhhhhhhhhhhhhh Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3knu B 0 SMIFNVLTIFPQMFPGPLGVSNLGSALKKGLWTLNVFDIRAFANNKHNTVDDTPYGGGPGMLLRADVLGRCIDEVLSLHPNTKLMFTSPRGVSFTQDIARQTMNFDNITLLCGRFEGIDERVVDFYKLQEVSIGDYVLSGGELAAMVIIDTCVRMVPGVI---------------EYPQYTRPASWKGMEVPEVLLTGNHGEIEKWRRNASL 211
9 19 29 39 49 59 69 79 89 99 109 119 129 139 149 159 - | 179 189 199 209
159 175
Chain C from PDB Type:PROTEIN Length:199
aligned with TRMD_ANAPZ | Q2GIL5 from UniProtKB/Swiss-Prot Length:232
Alignment length:211
1
| 9 19 29 39 49 59 69 79 89 99 109 119 129 139 149 159 169 179 189 199 209
TRMD_ANAPZ - -MIFNVLTIFPQMFPGPLGVSNLGSALKKGLWTLNVFDIRAFANNKHNTVDDTPYGGGPGMLLRADVLGRCIDEVLSLHPNTKLMFTSPRGVSFTQDIARQTMNFDNITLLCGRFEGIDERVVDFYKLQEVSIGDYVLSGGELAAMVIIDTCVRMVPGVIGNAESLKQESMEGSLEYPQYTRPASWKGMEVPEVLLTGNHGEIEKWRRNAS 210
SCOP domains d3knuc_ C: automated matches SCOP domains
CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .eeeeeee.hhhhhhhhhhhhhhhhhhhh..eeeeeee.hhhh.hhhhh.ee.........eehhhhhhhhhhhhhhhh...eeeee....ee.hhhhhhhhh...eeeeee......hhhhhhhhh.eeee........hhhhhhhhhhhhhh........------------..........ee..ee.hhhhhh.hhhhhhhhhhhhh Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3knu C 0 SMIFNVLTIFPQMFPGPLGVSNLGSALKKGLWTLNVFDIRAFANNKHNTVDDTPYGGGPGMLLRADVLGRCIDEVLSLHPNTKLMFTSPRGVSFTQDIARQTMNFDNITLLCGRFEGIDERVVDFYKLQEVSIGDYVLSGGELAAMVIIDTCVRMVPGVIGN------------LEYPQYTRPASWKGMEVPEVLLTGNHGEIEKWRRNAS 210
9 19 29 39 49 59 69 79 89 99 109 119 129 139 149 159 | - | 179 189 199 209
161 174
Chain D from PDB Type:PROTEIN Length:197
aligned with TRMD_ANAPZ | Q2GIL5 from UniProtKB/Swiss-Prot Length:232
Alignment length:212
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210
TRMD_ANAPZ 1 MIFNVLTIFPQMFPGPLGVSNLGSALKKGLWTLNVFDIRAFANNKHNTVDDTPYGGGPGMLLRADVLGRCIDEVLSLHPNTKLMFTSPRGVSFTQDIARQTMNFDNITLLCGRFEGIDERVVDFYKLQEVSIGDYVLSGGELAAMVIIDTCVRMVPGVIGNAESLKQESMEGSLEYPQYTRPASWKGMEVPEVLLTGNHGEIEKWRRNASLS 212
SCOP domains d3knud_ D: automated matches SCOP domains
CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains (1) ---------------------tRNA_m1G_MT-3knuD01 D:2 2-212 Pfam domains (1)
Pfam domains (2) ---------------------tRNA_m1G_MT-3knuD02 D:2 2-212 Pfam domains (2)
Pfam domains (3) ---------------------tRNA_m1G_MT-3knuD03 D:2 2-212 Pfam domains (3)
Pfam domains (4) ---------------------tRNA_m1G_MT-3knuD04 D:2 2-212 Pfam domains (4)
Sec.struct. author .eeeeee.hhhhhhhhhhhhhhhhhhhh...eeeeee.hhhh..-....ee.........eehhhhhhhhhhhhhhhh...eeeee....ee.hhhhhhhhhh..eeeeee......hhhhhhhhh.eeee........hhhhhhhhhhhhhh......--------------..........ee..ee.hhhhhh.hhhhhhhhhhhhh.. Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3knu D 1 MIFNVLTIFPQMFPGPLGVSNLGSALKKGLWTLNVFDIRAFANN-HNTVDDTPYGGGPGMLLRADVLGRCIDEVLSLHPNTKLMFTSPRGVSFTQDIARQTMNFDNITLLCGRFEGIDERVVDFYKLQEVSIGDYVLSGGELAAMVIIDTCVRMVPGVI--------------LEYPQYTRPASWKGMEVPEVLLTGNHGEIEKWRRNASLS 212
10 20 30 40 | | 50 60 70 80 90 100 110 120 130 140 150 |- - | 180 190 200 210
44 | 159 174
46
Legend: |
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→ Mismatch |
(orange background) |
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- |
→ Gap |
(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |