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(-)Asym./Biol. Unit
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(-) Description

Title :  STRUCTURE OF 20S SUPERCOMPLEX DETERMINED BY SINGLE PARTICLE CRYOELECTRON MICROSCOPY (STATE IIIA)
 
Authors :  M. Zhao, S. Wu, Y. Cheng, A. T. Brunger
Date :  05 Dec 14  (Deposition) - 28 Jan 15  (Release) - 11 Feb 15  (Revision)
Method :  ELECTRON MICROSCOPY
Resolution :  8.40
Chains :  Asym./Biol. Unit :  A,B,C,D,E,F,G,H,I,J,K,L,M
Keywords :  Vesicle Trafficking, Hydrolase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  M. Zhao, S. Wu, Q. Zhou, S. Vivona, D. J. Cipriano, Y. Cheng, A. T. Brunge
Mechanistic Insights Into The Recycling Machine Of The Snar Complex.
Nature V. 518 61 2015
PubMed-ID: 25581794  |  Reference-DOI: 10.1038/NATURE14148

(-) Compounds

Molecule 1 - VESICLE-FUSING ATPASE
    Chains: A, B, C, D, E, F
    EC Number: 3.6.4.6
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Gene: NSF
    Organism Common: CHINESE HAMSTER
    Organism Scientific: CRICETULUS GRISEUS
    Organism Taxid: 10029
    Synonym: N-ETHYLMALEIMIDE-SENSITIVE FUSION PROTEIN, NEM-SENSITIVE FUSION PROTEIN, VESICULAR-FUSION PROTEIN NSF, N-ETHYLMALEIMIDE SENSITIVE FACTOR
 
Molecule 2 - ALPHA-SOLUBLE NSF ATTACHMENT PROTEIN
    Chains: H, I, J, G
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Gene: NAPA, SNAP, SNAPA
    Organism Common: RAT
    Organism Scientific: RATTUS NORVEGICUS
    Organism Taxid: 10116
    Synonym: SNAP-ALPHA, N-ETHYLMALEIMIDE-SENSITIVE FACTOR ATTACHMENT PROTEIN ALPHA, ALPHA-SNAP
 
Molecule 3 - VESICLE-ASSOCIATED MEMBRANE PROTEIN 2
    Chains: K
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Fragment: UNP RESIDUES 28-89
    Gene: VAMP2, SYB2
    Organism Common: RAT
    Organism Scientific: RATTUS NORVEGICUS
    Organism Taxid: 10116
    Synonym: VAMP-2, SYNAPTOBREVIN-2
 
Molecule 4 - SYNTAXIN-1A
    Chains: L
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Fragment: UNP RESIDUES 191-256
    Gene: STX1A, SAP
    Organism Common: RAT
    Organism Scientific: RATTUS NORVEGICUS
    Organism Taxid: 10116
    Synonym: NEURON-SPECIFIC ANTIGEN HPC-1, SYNAPTOTAGMIN-ASSOCIATED 35 KDA PROTEIN, P35A
 
Molecule 5 - SYNAPTOSOMAL-ASSOCIATED PROTEIN 25
    Chains: M
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Gene: SNAP25, SNAP
    Organism Common: RAT
    Organism Scientific: RATTUS NORVEGICUS
    Organism Taxid: 10116
    Synonym: SNAP-25, SUPER PROTEIN, SUP, SYNAPTOSOMAL-ASSOCIATED 25 KDA PROTEIN

 Structural Features

(-) Chains, Units

  12345678910111213
Asymmetric/Biological Unit : ABCDEFGHIJKLM

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 3J98)

(-) Sites  (0, 0)

(no "Site" information available for 3J98)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 3J98)

(-) Cis Peptide Bonds  (45, 45)

Asymmetric/Biological Unit
No.Residues
1Pro A:262 -Gly A:263
2Gly A:263 -Cys A:264
3His A:347 -Asp A:348
4Pro A:490 -Ala A:491
5Phe A:492 -Gly A:493
6Gly A:493 -Thr A:494
7Gly A:615 -Pro A:616
8Gln A:636 -Gly A:637
9Met B:218 -Gly B:219
10Pro B:241 -Pro B:242
11Glu B:281 -Pro B:282
12Gly B:296 -Glu B:297
13Asn B:319 -Ser B:320
14Gly B:360 -Val B:361
15Pro B:490 -Ala B:491
16Gly B:615 -Pro B:616
17Met C:218 -Gly C:219
18Pro C:241 -Pro C:242
19Glu C:281 -Pro C:282
20Gly C:296 -Glu C:297
21Asn C:319 -Ser C:320
22Pro C:490 -Ala C:491
23Gly C:615 -Pro C:616
24Met D:218 -Gly D:219
25Pro D:241 -Pro D:242
26Glu D:281 -Pro D:282
27Asn D:319 -Ser D:320
28Gly D:360 -Val D:361
29Gly D:615 -Pro D:616
30Met E:218 -Gly E:219
31Pro E:241 -Pro E:242
32Glu E:281 -Pro E:282
33Gly E:296 -Glu E:297
34Asn E:319 -Ser E:320
35Gly E:360 -Val E:361
36Pro E:490 -Ala E:491
37Gly E:615 -Pro E:616
38Met F:218 -Gly F:219
39Pro F:241 -Pro F:242
40Glu F:281 -Pro F:282
41Gly F:296 -Glu F:297
42Asn F:319 -Ser F:320
43Gly F:360 -Val F:361
44Pro F:545 -His F:546
45Gly F:615 -Pro F:616

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 3J98)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 3J98)

(-) Exons   (0, 0)

(no "Exon" information available for 3J98)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:676
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeee...........eee.........eeeeeee..eeeeeeeee........eeehhhhhhhh......eeeeeee........eeeeeeee...........eeehhhhhhhhhh....eeee...eeeeee..eeeeeeeeeeee...ee.eeee....eeeeee......eee.............hhhhhhhhhhhhhhhhhh.hhhhhhhh.....eeeee.....hhhhhhhhhhhhhh....eee..........hhhhhhhhhhhhhhhhhhhhh......eeeeee.......hhhhhhhhhhhh.......eeeeee.......hhhhhh.....eeee....hhhhhhhhhhhhhhhhhhh.......hhhhhhhhh...hhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhh........hhhhhhh......hhhhhhhhhhhhhhhhhhhhh....eeeeeee.....hhhhhhhhhhhhhh..eeee.hhhhhh..hhhhhhhhhhhhhhhhhhh.eeeeee.hhhhhhh........hhhhhhhhhhhhhh......eeeeeeee.hhhhhhhhhhhhhh.eeee.....hhhhhhhhhhhhh..hhhhhhhhhhhhh......hhhhhhhhhhhhhh.hhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3j98 A   3 GRSMQAARCPTDELSLSNCAVVSEKDYQSGQHVIVRTSPNHKYIFTLRTHPSVVPGSVAFSLPQRKWAGLSIGQEIEVALYSFDKAKQCIGTMTIEIDFLQKKNIDSNPYDTDKMAAEFIQQFNNQAFSVGQQLVFSFNDKLFGLLVKDIEAMRQKIEVGLVVGNSQVAFEKAENSSLNLIGKAKTFEKMGIGGLDKEFSDIFRRAFASRVFPPEIVEQMGCKHVKGILLYGPPGCGKTLLARQIGKMLNAREPKVVNGPEILNKYVGESEANIRKLFADAEEEQRRLGANSGLHIIIFDEIDAICHDTVVNQLLSKIDGVEQLNNILVIGMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGRLQILHIHTARMRGHQLLSADVDIKELAVETKNFSGAELEGLVRAAQSTAMNRHIDFLASLENDIKPAFGTNQEDYASYIMNGIIKWGDPVTRVLDDGELLVQQTKNSDRTPLVSVLLEGPPHSGKTALAAKIAEESNFPFIKICSPDKMIGFSETAKCQAMKKIFDDAYKSQLSCVVVDDIERLLDYVPIGPRFSNLVLQALLVLLKKAPPQGRKLLIIGTTSRKDVLQEMEMLNAFSTTIHVPNIATGEQLLEALELLGNFKDKERTTIAQQVKGKKVWIGIKKLLMLIEMSLQMDPEYRVRKFLALLREEG 737
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152  ||   175       185       195     ||218       228       238       248       258       268       278       288       298       308       318       328     ||350       360       370       380       390       400       410       420       430       440       450      |481       491       501       511       521       531       541       551       561       571       581       591       601       611       621       631       641       651       661       671       681       691       701       711       721       731      
                                                                                                                                                                                  155|                             201|                                                                                                                    334|                                                                                                           457|                                                                                                                                                                                                                                                                  
                                                                                                                                                                                   169                              215                                                                                                                     347                                                                                                            479                                                                                                                                                                                                                                                                  


Chain B from PDB  Type:PROTEIN  Length:671
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeeeee...hhhhhh..............eeeee.....eeeee...........eeehhhhhhhh......eeeeeee.......eeeeeeeee...........eeehhhhhhhhhh....eeee...eeeeee..eeeeeeeeeeee..ee..eeeeeeeeeeeeee......eee............hhhhhhhhhhhhhhhhh.hhhhhhhh.....eeeee.....hhhhhhhhhhhhhh.....eee..........hhhhhhhhhhhhhhhhhhhhh.....eeeeee...hhhhhhhhhhhh.......eeeeeee......hhhhhh.....eeee....hhhhhhhhhhhhhhhhhhh.......hhhhhhhhh...hhhhhhhhhhhhhhhhhhhhh.hhhhhhhh.......hhhhhhh........hhhhhhhhhhhhhhhhhhhhh....eeeeeee.....hhhhhhhhhhhhhh..eeeee........hhhhhhhhhhhhhhhhhhh.eeeeee.hhhhhh.........hhhhhhhhhhhhhh......eeeeeeee.hhhhhhhhhhhhhh.eeee...eeehhhhhhhhhhhh..hhhhhhhhhhh....eeee.hhhhhhhhhhhhh....hhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3j98 B   1 MAGRSMQAARCPTDELSLSNCAVVSEKDYQSGQHVIVRTSPNHKYIFTLRTHPSVVPGSVAFSLPQRKWAGLSIGQEIEVALYSFDKAKQCIGTMTIEIDFLQKKNIDSNPYDTDKMAAEFIQQFNNQAFSVGQQLVFSFNDKLFGLLVKDIEAMRQKIEVGLVVGNSQVAFEKAENSSLNLIGKAKTKMGIGGLDKEFSDIFRRAFASRVFPPEIVEQMGCKHVKGILLYGPPGCGKTLLARQIGKMLNAREPKVVNGPEILNKYVGESEANIRKLFADAEEEQRRLGANSGLHIIIFDEIHDTVVNQLLSKIDGVEQLNNILVIGMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGRLQILHIHTARMRGHQLLSADVDIKELAVETKNFSGAELEGLVRAAQSTAMNRHIFLASLENDIKPAFGTNQEDYASYIMNGIIKWGDPVTRVLDDGELLVQQTKNSDRTPLVSVLLEGPPHSGKTALAAKIAEESNFPFIKICSPDKMIGFSETAKCQAMKKIFDDAYKSQLSCVVVDDIERLLDYVPIGPRFSNLVLQALLVLLKKAPPQGRKLLIIGTTSRKDVLQEMEMLNAFSTTIHVPNIATGEQLLEALELLGNFKDKERTTIAQQVKGKKVWIGIKKLLMLIEMSLQMDPEYRVRKFLALLREEG 737
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150    || 173       183       193       218       228       238       248       258       268       278       288       298       308       318       328 ||    354       364       374       384       394       404       414       424       434       444       454  ||   486       496       506       516       526       536       546       556       566       576       586       596       606       616       626       636       646       656       666       676       686       696       706       716       726       736 
                                                                                                                                                                                    155|                             201|                                                                                                              330|                                                                                                           457|                                                                                                                                                                                                                                                                 
                                                                                                                                                                                     169                              217                                                                                                               347                                                                                                            480                                                                                                                                                                                                                                                                 


Chain C from PDB  Type:PROTEIN  Length:676
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeeeee..hhhhhh...............eeeeeee..eeeeee..........eeeehhhhhh........eeee.ee.......eeeeeeeee...........eeehhhhhhhhhhhh..eeee......ee....ee...eeeeee......eeeeeeeeeeeeee......eee............hhhhhhhhhhhhhhhhh.hhhhhhhh.....eeeee.....hhhhhhhhhhhhhh.....eee..........hhhhhhhhhhhhhhhhhhhhh.....eeeeeehhhhhh.hhhhhhhhhhhh.......eeeeeee......hhhhhh.....eeee....hhhhhhhhhhhhhhhhhhh.......hhhhhhhhh...hhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhh........hhhhhh.......hhhhhhhhhhhhhhhhhhhhh....eeeeeee.....hhhhhhhhhhhhhh..eeeee........hhhhhhhhhhhhhhhhhhh.eeeeee.hhhhhhh........hhhhhhhhhhhhhh......eeeeeeee.hhhhhhhhhhhhhh.eeee...eeehhhhhhhhhhhh..hhhhhhhhhhhhh..eeeehhhhhhhhhhhhhhh....hhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3j98 C   1 MAGRSMQAARCPTDELSLSNCAVVSEKDYQSGQHVIVRTSPNHKYIFTLRTHPSVVPGSVAFSLPQRKWAGLSIGQEIEVALYSFDKAKQCIGTMTIEIDFLQKKNIDSNPYDTDKMAAEFIQQFNNQAFSVGQQLVFSFNDKLFGLLVKDIEAMRQKIEVGLVVGNSQVAFEKAENSSLNLIGKAKTKMGIGGLDKEFSDIFRRAFASRVFPPEIVEQMGCKHVKGILLYGPPGCGKTLLARQIGKMLNAREPKVVNGPEILNKYVGESEANIRKLFADAEEEQRRLGANSGLHIIIFDEIDAICHDTVVNQLLSKIDGVEQLNNILVIGMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGRLQILHIHTARMRGHQLLSADVDIKELAVETKNFSGAELEGLVRAAQSTAMNRHIDFLASLENDIKPAFGTNQEDYASYIMNGIIKWGDPVTRVLDDGELLVQQTKNSDRTPLVSVLLEGPPHSGKTALAAKIAEESNFPFIKICSPDKMIGFSETAKCQAMKKIFDDAYKSQLSCVVVDDIERLLDYVPIGPRFSNLVLQALLVLLKKAPPQGRKLLIIGTTSRKDVLQEMEMLNAFSTTIHVPNIATGEQLLEALELLGNFKDKERTTIAQQVKGKKVWIGIKKLLMLIEMSLQMDPEYRVRKFLALLREEG 737
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150    || 173       183       193       218       228       238       248       258       268       278       288       298       308       318       328     ||350       360       370       380       390       400       410       420       430       440       450      |481       491       501       511       521       531       541       551       561       571       581       591       601       611       621       631       641       651       661       671       681       691       701       711       721       731      
                                                                                                                                                                                    155|                             201|                                                                                                                  334|                                                                                                           457|                                                                                                                                                                                                                                                                  
                                                                                                                                                                                     169                              217                                                                                                                   347                                                                                                            479                                                                                                                                                                                                                                                                  


Chain D from PDB  Type:PROTEIN  Length:673
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeeeee...hhhhhh..eee.........eeeeeee..eeeeeeeee........eee..hhhhh.......eeeeeee.......eeeeeeeee...........eeehhhhhhhhh.....eeee...eeeee....eeeeeeeeeee......eeeeeeeeeeeeee......eee...........hhhhhhhhhhhhhhhhhh.hhhhhhhh.....eeeee.....hhhhhhhhhhhhhh.....eee........hhhhhhhhhhhhhhhhhhhhhhh.....eeeeee......hhhhhhhhh.........eeeeeee......hhhhhh.....eeee....hhhhhhhhhhhhhhhhhhh.......hhhhhhhhh...hhhhhhhhhhhhhhhhhhhhh.hhhhhhhh.........hhhhh........hhhhhhhhhhhhhhhhhhhhh....eeeeeee.....hhhhhhhhhhhh....eeeeehhhhhh..hhhhhhhhhhhhhhhhh...eeeeee.hhhhhhh........hhhhhhhhhhhhhh......eeeeeee..hhhhhhhhhhhhhh.eeee...eeehhhhhhhhhhhh..hhhhhhhhhhhhh..eeeehhhhhhhhhhhhh......hhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3j98 D   1 MAGRSMQAARCPTDELSLSNCAVVSEKDYQSGQHVIVRTSPNHKYIFTLRTHPSVVPGSVAFSLPQRKWAGLSIGQEIEVALYSFDKAKQCIGTMTIEIDFLQKKNIDSNPYDTDKMAAEFIQQFNNQAFSVGQQLVFSFNDKLFGLLVKDIEAMRQKIEVGLVVGNSQVAFEKAENSSLNLIGKAKTKMGIGGLDKEFSDIFRRAFASRVFPPEIVEQMGCKHVKGILLYGPPGCGKTLLARQIGKMLNAREPKVVNGPEILNKYVGESEANIRKLFADAEEEQRRLGANSGLHIIIFDEIDAIDTVVNQLLSKIDGVEQLNNILVIGMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGRLQILHIHTARMRGHQLLSADVDIKELAVETKNFSGAELEGLVRAAQSTAMNRHIFLASLENDIKPAFGTNQEDYASYIMNGIIKWGDPVTRVLDDGELLVQQTKNSDRTPLVSVLLEGPPHSGKTALAAKIAEESNFPFIKICSPDKMIGFSETAKCQAMKKIFDDAYKSQLSCVVVDDIERLLDYVPIGPRFSNLVLQALLVLLKKAPPQGRKLLIIGTTSRKDVLQEMEMLNAFSTTIHVPNIATGEQLLEALELLGNFKDKERTTIAQQVKGKKVWIGIKKLLMLIEMSLQMDPEYRVRKFLALLREEG 737
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150    || 173       183       193       218       228       238       248       258       268       278       288       298       308       318       328    || 352       362       372       382       392       402       412       422       432       442       452    || 484       494       504       514       524       534       544       554       564       574       584       594       604       614       624       634       644       654       664       674       684       694       704       714       724       734   
                                                                                                                                                                                    155|                             201|                                                                                                                 333|                                                                                                          457|                                                                                                                                                                                                                                                                 
                                                                                                                                                                                     169                              217                                                                                                                  348                                                                                                           480                                                                                                                                                                                                                                                                 


Chain E from PDB  Type:PROTEIN  Length:670
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeeeee...........eee.........eeeeeee..eeeeeeeee........eeehhhhhhhhh.....eeeeee........eeeeeeeee............eehhhhhhhhhh....eeee...eeeee....eeeeeeeeeee......eeeeeeeeeeeeee.......ee............hhhhhhhhhhhhhhhhh.hhhhhhhh.....eeeee.....hhhhhhhhhhhhhh.....eee..........hhhhhhhhhhhhhhhhhhhhh.....eeeeee...hhhhhhhhhhhh.......eeeeeee......hhhhhh.....eeee....hhhhhhhhhhhhhhhhhhh.......hhhhhhhhh...hhhhhhhhhhhhhhhhhhhhh.hhhhhhhhh....................hhhhhhhhhhhhhhhhhhhh.....eeeeeee.....hhhhhhhhhhhhhh..eee..hhhhhh..hhhhhhhhhhhhhhhhhh...eeeeeehhhhhhh........hhhhhhhhhhhhhh.......eeeeeee.hhhhhhhhhhhhhh.eeee...eeehhhhhhhhhhhh..hhhhhhhhhhhhh..eeeehhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3j98 E   1 MAGRSMQAARCPTDELSLSNCAVVSEKDYQSGQHVIVRTSPNHKYIFTLRTHPSVVPGSVAFSLPQRKWAGLSIGQEIEVALYSFDKAKQCIGTMTIEIDFLQKKNIDSNPYDTDKMAAEFIQQFNNQAFSVGQQLVFSFNDKLFGLLVKDIEAMRQKIEVGLVVGNSQVAFEKAENSSLNLIGKAKTKMGIGGLDKEFSDIFRRAFASRVFPPEIVEQMGCKHVKGILLYGPPGCGKTLLARQIGKMLNAREPKVVNGPEILNKYVGESEANIRKLFADAEEEQRRLGANSGLHIIIFDEIHDTVVNQLLSKIDGVEQLNNILVIGMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGRLQILHIHTARMRGHQLLSADVDIKELAVETKNFSGAELEGLVRAAQSTAMNRHIDFLASLENDIKPAFGTEDYASYIMNGIIKWGDPVTRVLDDGELLVQQTKNSDRTPLVSVLLEGPPHSGKTALAAKIAEESNFPFIKICSPDKMIGFSETAKCQAMKKIFDDAYKSQLSCVVVDDIERLLDYVPIGPRFSNLVLQALLVLLKKAPPQGRKLLIIGTTSRKDVLQEMEMLNAFSTTIHVPNIATGEQLLEALELLGNFKDKERTTIAQQVKGKKVWIGIKKLLMLIEMSLQMDPEYRVRKFLALLREEG 737
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150    || 173       183       193       218       228       238       248       258       268       278       288       298       308       318       328 ||    354       364       374       384       394       404       414       424       434       444       454  ||   485       497       507       517       527       537       547       557       567       577       587       597       607       617       627       637       647       657       667       677       687       697       707       717       727       737
                                                                                                                                                                                    155|                             201|                                                                                                              330|                                                                                                           457|            494|                                                                                                                                                                                                                                                
                                                                                                                                                                                     169                              217                                                                                                               347                                                                                                            479             497                                                                                                                                                                                                                                                


Chain F from PDB  Type:PROTEIN  Length:654
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ...eeeeeee....hhhhh..eee.........eeeeeee..eeeeeeeee........eeehhhhhhhhh.....eeeeee........eeeeeeeeeee.........eeehhhhhhhhhhhh..eeee...eeeee....eeeeeeeeeee......eeeeeeeeeeeeee......eee............hhhhhhhhhhhhhhhhh.hhhhhhhh.....eeeee.....hhhhhhhhhhhhhh.....eee..........hhhhhhhhhhhhhhhhhhhhh.....eeeeee...hhhhhhhhhhhh.......eeeeeee......hhhhhh.....eeee....hhhhhhhhhhhhhhhhhhh.......hhhhhhhhh...hhhhhhhhhhhhhhhhhhhhh.hhhhhh.......hhhhhhhhhhhhhhhhhhhhh....eeeeeee.....hhhhhhhhhhhhhh..eeeee........hhhhhhhhhhhhhhhhhhh.eeeeee.hhhhhhh........hhhhhhhhhhhhhh......eeeeeeee.hhhhhhhhhhhhhh...ee...eeehhhhhhhhhhhh..hhhhhhhhhhhhh..eeeehhhhhhhhhhhhh....hhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3j98 F   1 MAGRSMQAARCPTDELSLSNCAVVSEKDYQSGQHVIVRTSPNHKYIFTLRTHPSVVPGSVAFSLPQRKWAGLSIGQEIEVALYSFDKAKQCIGTMTIEIDFLQKKNIDSNPYDTDKMAAEFIQQFNNQAFSVGQQLVFSFNDKLFGLLVKDIEAMRQKIEVGLVVGNSQVAFEKAENSSLNLIGKAKTKMGIGGLDKEFSDIFRRAFASRVFPPEIVEQMGCKHVKGILLYGPPGCGKTLLARQIGKMLNAREPKVVNGPEILNKYVGESEANIRKLFADAEEEQRRLGANSGLHIIIFDEIHDTVVNQLLSKIDGVEQLNNILVIGMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGRLQILHIHTARMRGHQLLSADVDIKELAVETKNFSGAELEGLVRAAQSTAMNRHIEDYASYIMNGIIKWGDPVTRVLDDGELLVQQTKNSDRTPLVSVLLEGPPHSGKTALAAKIAEESNFPFIKICSPDKMIGFSETAKCQAMKKIFDDAYKSQLSCVVVDDIERLLDYVPIGPRFSNLVLQALLVLLKKAPPQGRKLLIIGTTSRKDVLQEMEMLNAFSTTIHVPNIATGEQLLEALELLGNFKDKERTTIAQQVKGKKVWIGIKKLLMLIEMSLQMDPEYRVRKFLALLREEG 737
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150    || 173       183       193       218       228       238       248       258       268       278       288       298       308       318       328 ||    354       364       374       384       394       404       414       424       434       444       454  ||   503       513       523       533       543       553       563       573       583       593       603       613       623       633       643       653       663       673       683       693       703       713       723       733    
                                                                                                                                                                                    155|                             201|                                                                                                              330|                                                                                                           457|                                                                                                                                                                                                                                                
                                                                                                                                                                                     169                              217                                                                                                               347                                                                                                            497                                                                                                                                                                                                                                                


Chain G from PDB  Type:PROTEIN  Length:286
                                                                                                                                                                                                                                                                                                                              
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhh...hhhhhh.....hhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhh.........hhhhhhhhhhhh......hhhhhhhhhh...........hhhhhhhhhhhhh.....hhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3j98 G   8 AEAMALLAEAERKVKNSQSFFSGLFGGSSKIEEACEIYARAANMFKMAKNWSAAGNAFCQAAQLHLQLQSKHDAATCFVDAGNAFKKADPQEAINCLMRAIEIYTDMGRFTIAAKHHISIAEIYETELVDVEKAIAHYEQSADYYKGEESNSSANKCLLKVAGYAAQLEQYQKAIDIYEQVGTSAMDSPLLKYSAKDYFFKAALCHFCIDMLNAKLAVQKYEELFPAFSDSRECKLMKKLLEAHEEQNVDSYTESVKEYDSISRLDQWLTTMLLRIKKTIQGDEED 293
                                    17        27        37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287      


Chain H from PDB  Type:PROTEIN  Length:286
                                                                                                                                                                                                                                                                                                                              
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhh...hhhhhh.....hhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhh........hhhhhhhhhh......hhhhhhhhhh...........hhhhhhhhhhhhhh...hhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3j98 H   8 AEAMALLAEAERKVKNSQSFFSGLFGGSSKIEEACEIYARAANMFKMAKNWSAAGNAFCQAAQLHLQLQSKHDAATCFVDAGNAFKKADPQEAINCLMRAIEIYTDMGRFTIAAKHHISIAEIYETELVDVEKAIAHYEQSADYYKGEESNSSANKCLLKVAGYAAQLEQYQKAIDIYEQVGTSAMDSPLLKYSAKDYFFKAALCHFCIDMLNAKLAVQKYEELFPAFSDSRECKLMKKLLEAHEEQNVDSYTESVKEYDSISRLDQWLTTMLLRIKKTIQGDEED 293
                                    17        27        37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287      


Chain I from PDB  Type:PROTEIN  Length:286
                                                                                                                                                                                                                                                                                                                              
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhh...hhhhhh...hhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhh.........hhhhhhhhhhhh.......hhhhhhhhh......hhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3j98 I   8 AEAMALLAEAERKVKNSQSFFSGLFGGSSKIEEACEIYARAANMFKMAKNWSAAGNAFCQAAQLHLQLQSKHDAATCFVDAGNAFKKADPQEAINCLMRAIEIYTDMGRFTIAAKHHISIAEIYETELVDVEKAIAHYEQSADYYKGEESNSSANKCLLKVAGYAAQLEQYQKAIDIYEQVGTSAMDSPLLKYSAKDYFFKAALCHFCIDMLNAKLAVQKYEELFPAFSDSRECKLMKKLLEAHEEQNVDSYTESVKEYDSISRLDQWLTTMLLRIKKTIQGDEED 293
                                    17        27        37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287      


Chain J from PDB  Type:PROTEIN  Length:286
                                                                                                                                                                                                                                                                                                                              
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhh.....hhhhhh....hhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhh.........hhhhhhhhhhhh.......................hhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3j98 J   8 AEAMALLAEAERKVKNSQSFFSGLFGGSSKIEEACEIYARAANMFKMAKNWSAAGNAFCQAAQLHLQLQSKHDAATCFVDAGNAFKKADPQEAINCLMRAIEIYTDMGRFTIAAKHHISIAEIYETELVDVEKAIAHYEQSADYYKGEESNSSANKCLLKVAGYAAQLEQYQKAIDIYEQVGTSAMDSPLLKYSAKDYFFKAALCHFCIDMLNAKLAVQKYEELFPAFSDSRECKLMKKLLEAHEEQNVDSYTESVKEYDSISRLDQWLTTMLLRIKKTIQGDEED 293
                                    17        27        37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287      


Chain K from PDB  Type:PROTEIN  Length:61
                                                                                             
               SCOP domains ------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------- Transcript
                 3j98 K  29 NRRLQQTQAQVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFETSAAKLKRKYW  89
                                    38        48        58        68        78        88 


Chain L from PDB  Type:PROTEIN  Length:66
                                                                                                  
               SCOP domains ------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------ Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------ Transcript
                 3j98 L 191 ALSEIETRHSEIIKLENSIRELHDMFMDMAMLVESQGEMIDRIEYNVEHAVDYVERAVSDTKKAVK 256
                                   200       210       220       230       240       250      


Chain M from PDB  Type:PROTEIN  Length:131
                                                                                                                                                                   
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3j98 M  17 RADQLADESLESTRRMLQLVEESKDAGIRTLVMLDEQGEQLDRVEEGMNHINQDMKEAEKNLKDLGKARENEMDENLEQVSGIIGNLRHMALDMGNEIDTQNRQIDRIMEKADSNKTRIDEANQRATKMLG 204
                                    26        36        46        56        66        76      |143       153       163       173       183       193       203 
                                                                                             83|                                                               
                                                                                             141
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 3J98)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 3J98)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 3J98)

(-) Gene Ontology  (119, 185)

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  Cis Peptide Bonds
    Asn B:319 - Ser B:320   [ RasMol ]  
    Asn C:319 - Ser C:320   [ RasMol ]  
    Asn D:319 - Ser D:320   [ RasMol ]  
    Asn E:319 - Ser E:320   [ RasMol ]  
    Asn F:319 - Ser F:320   [ RasMol ]  
    Gln A:636 - Gly A:637   [ RasMol ]  
    Glu B:281 - Pro B:282   [ RasMol ]  
    Glu C:281 - Pro C:282   [ RasMol ]  
    Glu D:281 - Pro D:282   [ RasMol ]  
    Glu E:281 - Pro E:282   [ RasMol ]  
    Glu F:281 - Pro F:282   [ RasMol ]  
    Gly A:263 - Cys A:264   [ RasMol ]  
    Gly A:493 - Thr A:494   [ RasMol ]  
    Gly A:615 - Pro A:616   [ RasMol ]  
    Gly B:296 - Glu B:297   [ RasMol ]  
    Gly B:360 - Val B:361   [ RasMol ]  
    Gly B:615 - Pro B:616   [ RasMol ]  
    Gly C:296 - Glu C:297   [ RasMol ]  
    Gly C:615 - Pro C:616   [ RasMol ]  
    Gly D:360 - Val D:361   [ RasMol ]  
    Gly D:615 - Pro D:616   [ RasMol ]  
    Gly E:296 - Glu E:297   [ RasMol ]  
    Gly E:360 - Val E:361   [ RasMol ]  
    Gly E:615 - Pro E:616   [ RasMol ]  
    Gly F:296 - Glu F:297   [ RasMol ]  
    Gly F:360 - Val F:361   [ RasMol ]  
    Gly F:615 - Pro F:616   [ RasMol ]  
    His A:347 - Asp A:348   [ RasMol ]  
    Met B:218 - Gly B:219   [ RasMol ]  
    Met C:218 - Gly C:219   [ RasMol ]  
    Met D:218 - Gly D:219   [ RasMol ]  
    Met E:218 - Gly E:219   [ RasMol ]  
    Met F:218 - Gly F:219   [ RasMol ]  
    Phe A:492 - Gly A:493   [ RasMol ]  
    Pro A:262 - Gly A:263   [ RasMol ]  
    Pro A:490 - Ala A:491   [ RasMol ]  
    Pro B:241 - Pro B:242   [ RasMol ]  
    Pro B:490 - Ala B:491   [ RasMol ]  
    Pro C:241 - Pro C:242   [ RasMol ]  
    Pro C:490 - Ala C:491   [ RasMol ]  
    Pro D:241 - Pro D:242   [ RasMol ]  
    Pro E:241 - Pro E:242   [ RasMol ]  
    Pro E:490 - Ala E:491   [ RasMol ]  
    Pro F:241 - Pro F:242   [ RasMol ]  
    Pro F:545 - His F:546   [ RasMol ]  
 

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  3j98
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  SNAA_RAT | P54921
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  SNP25_RAT | P60881
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  STX1A_RAT | P32851
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  VAMP2_RAT | P63045
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  3.6.4.6
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        NSF_CRIGR | P18708: 1d2n 1nsf 1qcs 1qdn 3j94 3j95 3j96 3j97 3j99
        SNAA_RAT | P54921: 3j96 3j97 3j99
        SNP25_RAT | P60881: 1jth 1n7s 1sfc 1uee 1urq 3hd7 3ipd 3j96 3j97 3j99 5ccg 5cch 5cci 5kj7 5kj8 5lob 5low
        STX1A_RAT | P32851: 1br0 1ez3 1hvv 1jth 1kil 1n7s 1sfc 1urq 2bu0 2m8r 2n1t 3c98 3hd7 3ipd 3j96 3j97 3j99 3rk2 3rk3 3rl0 4jeh 4jeu 5ccg 5cch 5cci 5kj7 5kj8
        VAMP2_RAT | P63045: 1kil 1n7s 1sfc 2bu0 2kog 2n1t 3hd7 3ipd 3j96 3j97 3j99 5ccg 5cch 5cci

(-) Related Entries Specified in the PDB File

3j94 3j95 3j96 3j97 3j99