3HSF - JenaLib

Title :   HEAT SHOCK TRANSCRIPTION FACTOR (HSF)

Authors :   F. F. Damberger, J. G. Pelton, C. Liu, H. Cho, C. J. Harrison, H. C. M. Nelson, D. E. Wemmer

Date :   07 Aug 95 (Deposition) - 14 Nov 95 (Release) - 24 Feb 09 (Revision)

Method :   SOLUTION NMR

Resolution :   NOT APPLICABLE

Chains :   NMR Structure  : A  (30x)

Keywords :   Transcription Regulation (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   F. F. Damberger, J. G. Pelton, C. Liu, H. Cho, C. J. Harrison, H. C. Nelson, D. E. Wemmer
Refined Solution Structure And Dynamics Of The Dna-Binding Domain Of The Heat Shock Factor From Kluyveromyces Lactis.
J. Mol. Biol. V. 254 704 1995
PubMed-ID: 7500344 | Reference-DOI: 10.1006/JMBI.1995.0649
(for further references see the PDB file header)

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (0, 0)

Sites (0, 0)

SS Bonds (0, 0)

Cis Peptide Bonds (0, 0)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (1, 1)

Exons (0, 0)

Sequences/Alignments

NMR Structure

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	UniProt sequence: complete aligned part

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Chain A from PDB  Type:PROTEIN  Length:92
 aligned with HSF_KLULA | P22121 from UniProtKB/Swiss-Prot  Length:677

    Alignment length:165
                                   202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352     
            HSF_KLULA   193 ARPAFVNKLWSMVNDKSNEKFIHWSTSGESIVVPNRERFVQEVLPKYFKHSNFASFVRQLNMYGWHKVQDVKSGSMLSNNDSRWEFENENFKRGKEYLLENIVRQKSNTNILGGTTNAEVDIHILLNELETVKYNQLAIAEDLKRITKDNEMLWKENMMARERHQ 357
               SCOP domains d3hsfa_ A: Heat-shock transcription factor                                                                                                                            SCOP domains
               CATH domains 3hsfA00 A:1-92 'winged helix' repressor DNA binding domain                                                                                                            CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...hhhhhhhhhhh.......eee......eeee.hhhhhhhhhhhhh.....hhhhhhhhhh.eeee...............eee...-------------------------------------------------------------------------... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------HSF_DOMAIN  PDB: A:44-68 ------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 3hsf A   1 ARPAFVNKLWSMVNDKSNEKFIHWSTSGESIVVPNRERFVQEVLPKYFKHSNFASFVRQLNMYGWHKVQDVKSGSMLSNNDSRWEFENE-------------------------------------------------------------------------RHA  92
                                    10        20        30        40        50        60        70        80        |-         -         -         -         -         -         -         -  |  
                                                                                                                   89                                                                        90

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Classification and Annotation

SCOP Domains (1, 1)

CATH Domains (1, 1)

Pfam Domains (0, 0)

Gene Ontology (10, 10)

NMR Structure(hide GO term definitions)

Chain A (HSF_KLULA | P22121)

molecular function
	GO:0003677	DNA binding	Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
	GO:0043565	sequence-specific DNA binding	Interacting selectively and non-covalently with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding.
	GO:0003700	transcription factor activity, sequence-specific DNA binding	Interacting selectively and non-covalently with a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex.
biological process
	GO:0032007	negative regulation of TOR signaling	Any process that stops, prevents, or reduces the frequency, rate or extent of TOR signaling.
	GO:0006357	regulation of transcription from RNA polymerase II promoter	Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter.
	GO:0006355	regulation of transcription, DNA-templated	Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
	GO:0009408	response to heat	Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a heat stimulus, a temperature stimulus above the optimal temperature for that organism.
	GO:0030474	spindle pole body duplication	Construction of a new spindle pole body.
	GO:0006351	transcription, DNA-templated	The cellular synthesis of RNA on a template of DNA.
cellular component
	GO:0005634	nucleus	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.

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