Chain A from PDB Type:PROTEIN Length:223
aligned with Q9I045_PSEAE | Q9I045 from UniProtKB/TrEMBL Length:394
Alignment length:245
157 167 177 187 197 207 217 227 237 247 257 267 277 287 297 307 317 327 337 347 357 367 377 387
Q9I045_PSEAE 148 SLNLLQEDQNAGRQVQMNMLPVTPWSIEGLEFSHRIIPSLYLSGDFVDYFRVDERRVAFYLADVSGHGASSAFVTVLLKFMTTRLLYESRRNGTLPEFKPSEVLAHINRGLINTKLGKHVTMLGGVIDLEKNSLTYSIGGHLPLPVLFVEGQAGYLEGRGLPVGLFDDATYDDRVMELPPSFSLSLFSDGILDVLPGATLKEKEASLPEQVAAAGGTLDGLRQVFGLANLAEMPDDIALLVLSRN 392
SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author hhhhhhhhhhhhhhhhhhhh....eee..eeeeeeee.......eeeeeeee...eeeeeeeee...hhhhhhhhhhhhhhhhhhhhhhh....----hhhhhhhhhhhhhh.......eeeeeeeee....eeeeee.......ee..--..ee...-----.........---......eeeeee..........---......hhhhhhhhh..hhhhhhhh-----......eeeeeeee. Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3f79 A 148 SLNLLQEDQNAGRQVQmNmLPVTPWSIEGLEFSHRIIPSLYLSGDFVDYFRVDERRVAFYLADVSGHGASSAFVTVLLKFmTTRLLYESRRNGT----KPSEVLAHINRGLINTKLGKHVTmLGGVIDLEKNSLTYSIGGHLPLPVLFV--QAGYLEG-----GLFDDATYD---mELPPSFSLSLFSDGILDVLPG---KEKEASLPEQVAAAGGTLDGLRQVF-----AEmPDDIALLVLSRN 392
157 |167 177 187 197 207 217 227| 237 | 247 257 267 | 277 287 |- | | - | 317 | | 327 337 | -| 357 367 | -| | 387
164-MSE 228-MSE 241 246 269-MSE 296 | 305 311 319 | 344 348 372 378 |
166-MSE 299 323-MSE 380-MSE
Chain B from PDB Type:PROTEIN Length:229
aligned with Q9I045_PSEAE | Q9I045 from UniProtKB/TrEMBL Length:394
Alignment length:246
156 166 176 186 196 206 216 226 236 246 256 266 276 286 296 306 316 326 336 346 356 366 376 386
Q9I045_PSEAE 147 ASLNLLQEDQNAGRQVQMNMLPVTPWSIEGLEFSHRIIPSLYLSGDFVDYFRVDERRVAFYLADVSGHGASSAFVTVLLKFMTTRLLYESRRNGTLPEFKPSEVLAHINRGLINTKLGKHVTMLGGVIDLEKNSLTYSIGGHLPLPVLFVEGQAGYLEGRGLPVGLFDDATYDDRVMELPPSFSLSLFSDGILDVLPGATLKEKEASLPEQVAAAGGTLDGLRQVFGLANLAEMPDDIALLVLSRN 392
SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author hhhhhhhhhhhhhhhhhhhhh....eee..eeeeeeee.-.....eeeeeeee...eeeeeeeee...hhhhhhhhhhhhhhhhhhhhhh...-----..hhhhhhhhhhhhhh......eeeeeeeee....eeeeee.......eeee..eeee.....-............eeee....eeeee.......------.....hhhhhhhhhhh..hhhhhhh..----......eeeeeeee. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
3f79 B 147 ASLNLLQEDQNAGRQVQmNmLPVTPWSIEGLEFSHRIIP-LYLSGDFVDYFRVDERRVAFYLADVSGHGASSAFVTVLLKFmTTRLLYESRRN-----FKPSEVLAHINRGLINTKLGKHVTmLGGVIDLEKNSLTYSIGGHLPLPVLFVEGQAGYLEGRG-PVGLFDDATYDDRVmELPPSFSLSLFSDGILD------LKEKEASLPEQVAAAGGTLDGLRQVFG----AEmPDDIALLVLSRN 392
156 166 176 |-| 196 206 216 226 | 236 | 246 256 266 | 276 286 296 306| | 316 |326 336 | -| 356 366 | - | | 386
164-MSE 185 | 228-MSE 239 245 269-MSE 307 | 323-MSE 340 347 373 378 |
166-MSE 187 309 380-MSE
Chain C from PDB Type:PROTEIN Length:229
aligned with Q9I045_PSEAE | Q9I045 from UniProtKB/TrEMBL Length:394
Alignment length:246
156 166 176 186 196 206 216 226 236 246 256 266 276 286 296 306 316 326 336 346 356 366 376 386
Q9I045_PSEAE 147 ASLNLLQEDQNAGRQVQMNMLPVTPWSIEGLEFSHRIIPSLYLSGDFVDYFRVDERRVAFYLADVSGHGASSAFVTVLLKFMTTRLLYESRRNGTLPEFKPSEVLAHINRGLINTKLGKHVTMLGGVIDLEKNSLTYSIGGHLPLPVLFVEGQAGYLEGRGLPVGLFDDATYDDRVMELPPSFSLSLFSDGILDVLPGATLKEKEASLPEQVAAAGGTLDGLRQVFGLANLAEMPDDIALLVLSRN 392
SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author hhhhhhhhhhhhhhhhhhhhh....eee..eeeeeeee.......eeeeeee....eeeeeeeee...hhhhhhhhhhhhhhhhhhhhh-------...hhhhhhhhhhhhhhh......eeeeeeeee....eeeeee.......eeee..eeee.....--...........eeee....eeeee............-......hhhhhhhhhh...hhhhhhhh-------...eeeeeeee. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
3f79 C 147 ASLNLLQEDQNAGRQVQmNmLPVTPWSIEGLEFSHRIIPSLYLSGDFVDYFRVDERRVAFYLADVSGHGASSAFVTVLLKFmTTRLLYE-------PEFKPSEVLAHINRGLINTKLGKHVTmLGGVIDLEKNSLTYSIGGHLPLPVLFVEGQAGYLEGRG--VGLFDDATYDDRVmELPPSFSLSLFSDGILDVLPGA-LKEKEASLPEQVAAAGGTLDGLRQVFG-------PDDIALLVLSRN 392
156 166 176 186 196 206 216 226 | |- |246 256 266 | 276 286 296 306| | 316 |326 336 |-| 356 366 | - | 386
164-MSE 228-MSE235 243 269-MSE 307 | 323-MSE 345 | 373 381
166-MSE 310 347
Chain D from PDB Type:PROTEIN Length:230
aligned with Q9I045_PSEAE | Q9I045 from UniProtKB/TrEMBL Length:394
Alignment length:245
158 168 178 188 198 208 218 228 238 248 258 268 278 288 298 308 318 328 338 348 358 368 378 388
Q9I045_PSEAE 149 LNLLQEDQNAGRQVQMNMLPVTPWSIEGLEFSHRIIPSLYLSGDFVDYFRVDERRVAFYLADVSGHGASSAFVTVLLKFMTTRLLYESRRNGTLPEFKPSEVLAHINRGLINTKLGKHVTMLGGVIDLEKNSLTYSIGGHLPLPVLFVEGQAGYLEGRGLPVGLFDDATYDDRVMELPPSFSLSLFSDGILDVLPGATLKEKEASLPEQVAAAGGTLDGLRQVFGLANLAEMPDDIALLVLSRNL 393
SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author hhhhhhhhhhhhhhhhh......eee..eeeeeeee.......eeeeeee.--.eeeeeeeee...hhhhhhhhhhhhhhhhhhhhhhh.-----....hhhhhhhhhhhh.......eeeeeeeee....eeeeee.......eeee..eeee....---..........eeeee....eeeee........---....hhhhhhhhhhhhhh..hhhhhhhhh--........eeeeeeee.. Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3f79 D 149 LNLLQEDQNAGRQVQmNmLPVTPWSIEGLEFSHRIIPSLYLSGDFVDYFRV--RRVAFYLADVSGHGASSAFVTVLLKFmTTRLLYESRR-----EFKPSEVLAHINRGLINTKLGKHVTmLGGVIDLEKNSLTYSIGGHLPLPVLFVEGQAGYLEGR---VGLFDDATYDDRVmELPPSFSLSLFSDGILDV---ATLKEKEASLPEQVAAAGGTLDGLRQVFG--NLAEmPDDIALLVLSRNL 393
158 | 168 178 188 198| | 208 218 228 238 | 248 258 268| 278 288 298 | - | 318 | 328 338 | |348 358 368 | 378 | 388
164-MSE 199 | 228-MSE 238 244 269-MSE 306 310 323-MSE 341 345 373 | |
166-MSE 202 376 |
380-MSE
Chain E from PDB Type:PROTEIN Length:236
aligned with Q9I045_PSEAE | Q9I045 from UniProtKB/TrEMBL Length:394
Alignment length:246
156 166 176 186 196 206 216 226 236 246 256 266 276 286 296 306 316 326 336 346 356 366 376 386
Q9I045_PSEAE 147 ASLNLLQEDQNAGRQVQMNMLPVTPWSIEGLEFSHRIIPSLYLSGDFVDYFRVDERRVAFYLADVSGHGASSAFVTVLLKFMTTRLLYESRRNGTLPEFKPSEVLAHINRGLINTKLGKHVTMLGGVIDLEKNSLTYSIGGHLPLPVLFVEGQAGYLEGRGLPVGLFDDATYDDRVMELPPSFSLSLFSDGILDVLPGATLKEKEASLPEQVAAAGGTLDGLRQVFGLANLAEMPDDIALLVLSRN 392
SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author hhhhhhhhhhhhhhhhhhhhh....eee..eeeeeeee.......eeeeeeee...eeeeeeeee...hhhhhhhhhhhhhhhhhhhhhh.......-.hhhhhhhhhhhhhhh......ee.eeeeee....eeeeee.......eeee..eeee....---......--...eeee....eeeeee.......----.......hhhhhhhhhh..hhhhhhhh...........eeeeeeee. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
3f79 E 147 ASLNLLQEDQNAGRQVQmNmLPVTPWSIEGLEFSHRIIPSLYLSGDFVDYFRVDERRVAFYLADVSGHGASSAFVTVLLKFmTTRLLYESRRNGTLP-FKPSEVLAHINRGLINTKLGKHVTmLGGVIDLEKNSLTYSIGGHLPLPVLFVEGQAGYLEGR---VGLFDD--YDDRVmELPPSFSLSLFSDGILDV----TLKEKEASLPEQVAAAGGTLDGLRQVFGLANLAEmPDDIALLVLSRN 392
156 166 176 186 196 206 216 226 | 236 |246 256 266 | 276 286 296 306 | |- | |326 336 | 346 356 366 376 | 386
164-MSE 228-MSE 243 | 269-MSE 306 310 315 | | 341 346 380-MSE
166-MSE 245 318 |
323-MSE
Chain F from PDB Type:PROTEIN Length:235
aligned with Q9I045_PSEAE | Q9I045 from UniProtKB/TrEMBL Length:394
Alignment length:247
156 166 176 186 196 206 216 226 236 246 256 266 276 286 296 306 316 326 336 346 356 366 376 386
Q9I045_PSEAE 147 ASLNLLQEDQNAGRQVQMNMLPVTPWSIEGLEFSHRIIPSLYLSGDFVDYFRVDERRVAFYLADVSGHGASSAFVTVLLKFMTTRLLYESRRNGTLPEFKPSEVLAHINRGLINTKLGKHVTMLGGVIDLEKNSLTYSIGGHLPLPVLFVEGQAGYLEGRGLPVGLFDDATYDDRVMELPPSFSLSLFSDGILDVLPGATLKEKEASLPEQVAAAGGTLDGLRQVFGLANLAEMPDDIALLVLSRNL 393
SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .hhhhhhhhhhhhhhhhhh......eee..eeeeeeee.......eeeeeeee...eeeeeeeee...hhhhhhhhhhhhhhhhhhhhh.....--...hhhhhhhhhhhhhhh......eeeeeeeee....eeeeee.......eee....eee....--...........eeeee....eeeeee...................hhhhhhhhh..hhhhhhhh--------...eeeeeeee.. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3f79 F 147 ASLNLLQEDQNAGRQVQmNmLPVTPWSIEGLEFSHRIIPSLYLSGDFVDYFRVDERRVAFYLADVSGHGASSAFVTVLLKFmTTRLLYESRRNG--PEFKPSEVLAHINRGLINTKLGKHVTmLGGVIDLEKNSLTYSIGGHLPLPVLFVEGQAGYLEGR--PVGLFDDATYDDRVmELPPSFSLSLFSDGILDVLPGATLKEKEASLPEQVAAAGGTLDGLRQVF--------PDDIALLVLSRNL 393
156 166 176 186 196 206 216 226 | 236 | |246 256 266 | 276 286 296 306 | 316 |326 336 346 356 366 | - | 386
164-MSE 228-MSE 240 | 269-MSE 306 | 323-MSE 372 381
166-MSE 243 309
Legend: |
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→ Mismatch |
(orange background) |
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- |
→ Gap |
(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |