Chain A from PDB Type:PROTEIN Length:159
aligned with ISPF_BURP1 | Q3JRA0 from UniProtKB/Swiss-Prot Length:162
Alignment length:159
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150
ISPF_BURP1 1 MDFRIGQGYDVHQLVPGRPLIIGGVTIPYERGLLGHSDADVLLHAITDALFGAAALGDIGRHFSDTDPRFKGADSRALLRECASRVAQAGFAIRNVDSTIIAQAPKLAPHIDAMRANIAADLDLPLDRVNVKAKTNEKLGYLGRGEGIEAQAAALVVRE 159
SCOP domains d3f0fa_ A: automated matches SCOP domains
CATH domains 3f0fA00 A:1-159 [code=3.30.1330.50, no name defined] CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .eeeeeeeeeeeeee.....ee..ee.....ee......hhhhhhhhhhhhhhh...hhhhhh...hhhhh..hhhhhhhhhhhhhhhh.eeeeeeeeeee.....hhhhhhhhhhhhhhhh..hhhhh..eee....hhhhhh..eeeeeeeeeeee. Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (2) ------------------------------------ISPF ----------------------------------------------------------------------------------------------------------- PROSITE (2)
Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3f0f A 1 MDFRIGQGYDVHQLVPGRPLIIGGVTIPYERGLLGHSDADVLLHAITDALFGAAALGDIGRHFSDTDPRFKGADSRALLRECASRVAQAGFAIRNVDSTIIAQAPKLAPHIDAMRANIAADLDLPLDRVNVKAKTNEKLGYLGRGEGIEAQAAALVVRE 159
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150
Chain A from PDB Type:PROTEIN Length:159
aligned with ISPF_BURPS | Q63T71 from UniProtKB/Swiss-Prot Length:162
Alignment length:159
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150
ISPF_BURPS 1 MDFRIGQGYDVHQLVPGRPLIIGGVTIPYERGLLGHSDADVLLHAITDALFGAAALGDIGRHFSDTDPRFKGADSRALLRECASRVAQAGFAIRNVDSTIIAQAPKLAPHIDAMRANIAADLDLPLDRVNVKAKTNEKLGYLGRGEGIEAQAAALVVRE 159
SCOP domains d3f0fa_ A: automated matches SCOP domains
CATH domains 3f0fA00 A:1-159 [code=3.30.1330.50, no name defined] CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .eeeeeeeeeeeeee.....ee..ee.....ee......hhhhhhhhhhhhhhh...hhhhhh...hhhhh..hhhhhhhhhhhhhhhh.eeeeeeeeeee.....hhhhhhhhhhhhhhhh..hhhhh..eee....hhhhhh..eeeeeeeeeeee. Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------ISPF ----------------------------------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3f0f A 1 MDFRIGQGYDVHQLVPGRPLIIGGVTIPYERGLLGHSDADVLLHAITDALFGAAALGDIGRHFSDTDPRFKGADSRALLRECASRVAQAGFAIRNVDSTIIAQAPKLAPHIDAMRANIAADLDLPLDRVNVKAKTNEKLGYLGRGEGIEAQAAALVVRE 159
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150
Chain B from PDB Type:PROTEIN Length:159
aligned with ISPF_BURP1 | Q3JRA0 from UniProtKB/Swiss-Prot Length:162
Alignment length:159
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150
ISPF_BURP1 1 MDFRIGQGYDVHQLVPGRPLIIGGVTIPYERGLLGHSDADVLLHAITDALFGAAALGDIGRHFSDTDPRFKGADSRALLRECASRVAQAGFAIRNVDSTIIAQAPKLAPHIDAMRANIAADLDLPLDRVNVKAKTNEKLGYLGRGEGIEAQAAALVVRE 159
SCOP domains d3f0fb_ B: automated matches SCOP domains
CATH domains 3f0fB00 B:1-159 [code=3.30.1330.50, no name defined] CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .eeeeeeeeeeeeee....eee..eee....ee......hhhhhhhhhhhhhhh...hhhhhh..........hhhhhhhhhhhhhhhh.eeeeeeeeeee.....hhhhhhhhhhhhhhhhh.hhh.eeeeee....hhhhhh..eeeeeeeeeeee. Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (2) ------------------------------------ISPF ----------------------------------------------------------------------------------------------------------- PROSITE (2)
Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3f0f B 1 MDFRIGQGYDVHQLVPGRPLIIGGVTIPYERGLLGHSDADVLLHAITDALFGAAALGDIGRHFSDTDPRFKGADSRALLRECASRVAQAGFAIRNVDSTIIAQAPKLAPHIDAMRANIAADLDLPLDRVNVKAKTNEKLGYLGRGEGIEAQAAALVVRE 159
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150
Chain B from PDB Type:PROTEIN Length:159
aligned with ISPF_BURPS | Q63T71 from UniProtKB/Swiss-Prot Length:162
Alignment length:159
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150
ISPF_BURPS 1 MDFRIGQGYDVHQLVPGRPLIIGGVTIPYERGLLGHSDADVLLHAITDALFGAAALGDIGRHFSDTDPRFKGADSRALLRECASRVAQAGFAIRNVDSTIIAQAPKLAPHIDAMRANIAADLDLPLDRVNVKAKTNEKLGYLGRGEGIEAQAAALVVRE 159
SCOP domains d3f0fb_ B: automated matches SCOP domains
CATH domains 3f0fB00 B:1-159 [code=3.30.1330.50, no name defined] CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .eeeeeeeeeeeeee....eee..eee....ee......hhhhhhhhhhhhhhh...hhhhhh..........hhhhhhhhhhhhhhhh.eeeeeeeeeee.....hhhhhhhhhhhhhhhhh.hhh.eeeeee....hhhhhh..eeeeeeeeeeee. Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------ISPF ----------------------------------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3f0f B 1 MDFRIGQGYDVHQLVPGRPLIIGGVTIPYERGLLGHSDADVLLHAITDALFGAAALGDIGRHFSDTDPRFKGADSRALLRECASRVAQAGFAIRNVDSTIIAQAPKLAPHIDAMRANIAADLDLPLDRVNVKAKTNEKLGYLGRGEGIEAQAAALVVRE 159
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150
Chain C from PDB Type:PROTEIN Length:156
aligned with ISPF_BURP1 | Q3JRA0 from UniProtKB/Swiss-Prot Length:162
Alignment length:159
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150
ISPF_BURP1 1 MDFRIGQGYDVHQLVPGRPLIIGGVTIPYERGLLGHSDADVLLHAITDALFGAAALGDIGRHFSDTDPRFKGADSRALLRECASRVAQAGFAIRNVDSTIIAQAPKLAPHIDAMRANIAADLDLPLDRVNVKAKTNEKLGYLGRGEGIEAQAAALVVRE 159
SCOP domains d3f0fc_ C: automated matches SCOP domains
CATH domains 3f0fC00 C:1-159 [code=3.30.1330.50, no name defined] CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..eeeeeeeeeeeeee...eee..eee...eeee.....hhhhhhhhhhhhhhh...hhhhhh.---......hhhhhhhhhhhhhhhh.eeeeeeeeeee.....hhhhhhhhhhhhhhhhh.hhhhh..eee....hhhhhh..eeeeeeeeeeee. Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (2) ------------------------------------ISPF ----------------------------------------------------------------------------------------------------------- PROSITE (2)
Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3f0f C 1 MDFRIGQGYDVHQLVPGRPLIIGGVTIPYERGLLGHSDADVLLHAITDALFGAAALGDIGRHFS---PRFKGADSRALLRECASRVAQAGFAIRNVDSTIIAQAPKLAPHIDAMRANIAADLDLPLDRVNVKAKTNEKLGYLGRGEGIEAQAAALVVRE 159
10 20 30 40 50 60 | |70 80 90 100 110 120 130 140 150
64 68
Chain C from PDB Type:PROTEIN Length:156
aligned with ISPF_BURPS | Q63T71 from UniProtKB/Swiss-Prot Length:162
Alignment length:159
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150
ISPF_BURPS 1 MDFRIGQGYDVHQLVPGRPLIIGGVTIPYERGLLGHSDADVLLHAITDALFGAAALGDIGRHFSDTDPRFKGADSRALLRECASRVAQAGFAIRNVDSTIIAQAPKLAPHIDAMRANIAADLDLPLDRVNVKAKTNEKLGYLGRGEGIEAQAAALVVRE 159
SCOP domains d3f0fc_ C: automated matches SCOP domains
CATH domains 3f0fC00 C:1-159 [code=3.30.1330.50, no name defined] CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..eeeeeeeeeeeeee...eee..eee...eeee.....hhhhhhhhhhhhhhh...hhhhhh.---......hhhhhhhhhhhhhhhh.eeeeeeeeeee.....hhhhhhhhhhhhhhhhh.hhhhh..eee....hhhhhh..eeeeeeeeeeee. Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------ISPF ----------------------------------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3f0f C 1 MDFRIGQGYDVHQLVPGRPLIIGGVTIPYERGLLGHSDADVLLHAITDALFGAAALGDIGRHFS---PRFKGADSRALLRECASRVAQAGFAIRNVDSTIIAQAPKLAPHIDAMRANIAADLDLPLDRVNVKAKTNEKLGYLGRGEGIEAQAAALVVRE 159
10 20 30 40 50 60 | |70 80 90 100 110 120 130 140 150
64 68
Legend: |
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→ Mismatch |
(orange background) |
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- |
→ Gap |
(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |