Chain A from PDB Type:PROTEIN Length:158
aligned with ISPF_BURP1 | Q3JRA0 from UniProtKB/Swiss-Prot Length:162
Alignment length:158
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150
ISPF_BURP1 1 MDFRIGQGYDVHQLVPGRPLIIGGVTIPYERGLLGHSDADVLLHAITDALFGAAALGDIGRHFSDTDPRFKGADSRALLRECASRVAQAGFAIRNVDSTIIAQAPKLAPHIDAMRANIAADLDLPLDRVNVKAKTNEKLGYLGRGEGIEAQAAALVVR 158
SCOP domains d3f0ea_ A: automated matches SCOP domains
CATH domains 3f0eA00 A:1-158 [code=3.30.1330.50, no name defined] CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .eeeeeeeeeeeeeee...eee..eee...eee......hhhhhhhhhhhhhhh...hhhhhh...hhhhh..hhhhhhhhhhhhhhhh..eeeeeeeeee.....hhhhhhhhhhhhhhhh..hhh.eeeeee....hhhhhh..eeeeeeeeeeee Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (2) ------------------------------------ISPF ---------------------------------------------------------------------------------------------------------- PROSITE (2)
Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3f0e A 1 MDFRIGQGYDVHQLVPGRPLIIGGVTIPYERGLLGHSDADVLLHAITDALFGAAALGDIGRHFSDTDPRFKGADSRALLRECASRVAQAGFAIRNVDSTIIAQAPKLAPHIDAMRANIAADLDLPLDRVNVKAKTNEKLGYLGRGEGIEAQAAALVVR 158
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150
Chain A from PDB Type:PROTEIN Length:158
aligned with ISPF_BURPS | Q63T71 from UniProtKB/Swiss-Prot Length:162
Alignment length:158
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150
ISPF_BURPS 1 MDFRIGQGYDVHQLVPGRPLIIGGVTIPYERGLLGHSDADVLLHAITDALFGAAALGDIGRHFSDTDPRFKGADSRALLRECASRVAQAGFAIRNVDSTIIAQAPKLAPHIDAMRANIAADLDLPLDRVNVKAKTNEKLGYLGRGEGIEAQAAALVVR 158
SCOP domains d3f0ea_ A: automated matches SCOP domains
CATH domains 3f0eA00 A:1-158 [code=3.30.1330.50, no name defined] CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .eeeeeeeeeeeeeee...eee..eee...eee......hhhhhhhhhhhhhhh...hhhhhh...hhhhh..hhhhhhhhhhhhhhhh..eeeeeeeeee.....hhhhhhhhhhhhhhhh..hhh.eeeeee....hhhhhh..eeeeeeeeeeee Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------ISPF ---------------------------------------------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3f0e A 1 MDFRIGQGYDVHQLVPGRPLIIGGVTIPYERGLLGHSDADVLLHAITDALFGAAALGDIGRHFSDTDPRFKGADSRALLRECASRVAQAGFAIRNVDSTIIAQAPKLAPHIDAMRANIAADLDLPLDRVNVKAKTNEKLGYLGRGEGIEAQAAALVVR 158
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150
Chain B from PDB Type:PROTEIN Length:146
aligned with ISPF_BURP1 | Q3JRA0 from UniProtKB/Swiss-Prot Length:162
Alignment length:158
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150
ISPF_BURP1 1 MDFRIGQGYDVHQLVPGRPLIIGGVTIPYERGLLGHSDADVLLHAITDALFGAAALGDIGRHFSDTDPRFKGADSRALLRECASRVAQAGFAIRNVDSTIIAQAPKLAPHIDAMRANIAADLDLPLDRVNVKAKTNEKLGYLGRGEGIEAQAAALVVR 158
SCOP domains d3f0eb_ B: automated matches SCOP domains
CATH domains 3f0eB00 B:1-158 [code=3.30.1330.5 0, no name defined] CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..eeeeeeeeeeeee....eee..eee....ee.---..hhhhhhhhhhhhhhhh..hhhhhh---------.hhhhhhhhhhhhhhhh..eeeeeeeeee.....hhhhhhhhhhhhhhhhh.hhhhh..eee....hhhhhh..eeeeeeeeeee. Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (2) ------------------------------------ISPF ---------------------------------------------------------------------------------------------------------- PROSITE (2)
Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3f0e B 1 MDFRIGQGYDVHQLVPGRPLIIGGVTIPYERGLL---DADVLLHAITDALFGAAALGDIGRHF---------ADSRALLRECASRVAQAGFAIRNVDSTIIAQAPKLAPHIDAMRANIAADLDLPLDRVNVKAKTNEKLGYLGRGEGIEAQAAALVVR 158
10 20 30 | |40 50 60 | - | 80 90 100 110 120 130 140 150
34 38 63 73
Chain B from PDB Type:PROTEIN Length:146
aligned with ISPF_BURPS | Q63T71 from UniProtKB/Swiss-Prot Length:162
Alignment length:158
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150
ISPF_BURPS 1 MDFRIGQGYDVHQLVPGRPLIIGGVTIPYERGLLGHSDADVLLHAITDALFGAAALGDIGRHFSDTDPRFKGADSRALLRECASRVAQAGFAIRNVDSTIIAQAPKLAPHIDAMRANIAADLDLPLDRVNVKAKTNEKLGYLGRGEGIEAQAAALVVR 158
SCOP domains d3f0eb_ B: automated matches SCOP domains
CATH domains 3f0eB00 B:1-158 [code=3.30.1330.5 0, no name defined] CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..eeeeeeeeeeeee....eee..eee....ee.---..hhhhhhhhhhhhhhhh..hhhhhh---------.hhhhhhhhhhhhhhhh..eeeeeeeeee.....hhhhhhhhhhhhhhhhh.hhhhh..eee....hhhhhh..eeeeeeeeeee. Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------ISPF ---------------------------------------------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3f0e B 1 MDFRIGQGYDVHQLVPGRPLIIGGVTIPYERGLL---DADVLLHAITDALFGAAALGDIGRHF---------ADSRALLRECASRVAQAGFAIRNVDSTIIAQAPKLAPHIDAMRANIAADLDLPLDRVNVKAKTNEKLGYLGRGEGIEAQAAALVVR 158
10 20 30 | |40 50 60 | - | 80 90 100 110 120 130 140 150
34 38 63 73
Chain C from PDB Type:PROTEIN Length:145
aligned with ISPF_BURP1 | Q3JRA0 from UniProtKB/Swiss-Prot Length:162
Alignment length:157
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151
ISPF_BURP1 2 DFRIGQGYDVHQLVPGRPLIIGGVTIPYERGLLGHSDADVLLHAITDALFGAAALGDIGRHFSDTDPRFKGADSRALLRECASRVAQAGFAIRNVDSTIIAQAPKLAPHIDAMRANIAADLDLPLDRVNVKAKTNEKLGYLGRGEGIEAQAAALVVR 158
SCOP domains d3f0ec_ C: automated matches SCOP domains
CATH domains 3f0eC00 C:2-158 [code=3.30.1330.5 0, no name defined] CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .eeeeeeeeeeeeee...eee..eee...eee..--..hhhhhhhhhhhhhhh...hhhhhh----------hhhhhhhhhhhhhhhh..eeeeeeeeee.....hhhhhhhhhhhhhhhh..hhh.eeeeee....hhhhhh..eeeeeeeeeee. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE (2) -----------------------------------ISPF ---------------------------------------------------------------------------------------------------------- PROSITE (2)
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3f0e C 2 DFRIGQGYDVHQLVPGRPLIIGGVTIPYERGLLG--DADVLLHAITDALFGAAALGDIGRHF----------DSRALLRECASRVAQAGFAIRNVDSTIIAQAPKLAPHIDAMRANIAADLDLPLDRVNVKAKTNEKLGYLGRGEGIEAQAAALVVR 158
11 21 31 | | 41 51 61 | - | 81 91 101 111 121 131 141 151
35 38 63 74
Chain C from PDB Type:PROTEIN Length:145
aligned with ISPF_BURPS | Q63T71 from UniProtKB/Swiss-Prot Length:162
Alignment length:157
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151
ISPF_BURPS 2 DFRIGQGYDVHQLVPGRPLIIGGVTIPYERGLLGHSDADVLLHAITDALFGAAALGDIGRHFSDTDPRFKGADSRALLRECASRVAQAGFAIRNVDSTIIAQAPKLAPHIDAMRANIAADLDLPLDRVNVKAKTNEKLGYLGRGEGIEAQAAALVVR 158
SCOP domains d3f0ec_ C: automated matches SCOP domains
CATH domains 3f0eC00 C:2-158 [code=3.30.1330.5 0, no name defined] CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .eeeeeeeeeeeeee...eee..eee...eee..--..hhhhhhhhhhhhhhh...hhhhhh----------hhhhhhhhhhhhhhhh..eeeeeeeeee.....hhhhhhhhhhhhhhhh..hhh.eeeeee....hhhhhh..eeeeeeeeeee. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -----------------------------------ISPF ---------------------------------------------------------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3f0e C 2 DFRIGQGYDVHQLVPGRPLIIGGVTIPYERGLLG--DADVLLHAITDALFGAAALGDIGRHF----------DSRALLRECASRVAQAGFAIRNVDSTIIAQAPKLAPHIDAMRANIAADLDLPLDRVNVKAKTNEKLGYLGRGEGIEAQAAALVVR 158
11 21 31 | | 41 51 61 | - | 81 91 101 111 121 131 141 151
35 38 63 74
Legend: |
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→ Mismatch |
(orange background) |
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- |
→ Gap |
(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |