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(-) Description

Title :  CRYSTAL STRUCTURE OF THE FAS/FADD DEATH DOMAIN COMPLEX
 
Authors :  R. Schwarzenbacher, H. Robinson, B. Stec, S. J. Riedl
Date :  23 Oct 08  (Deposition) - 23 Dec 08  (Release) - 20 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.73
Chains :  Asym. Unit :  A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P
Biol. Unit 1:  A,B,C,D  (1x)
Biol. Unit 2:  E,F,G,H  (1x)
Biol. Unit 3:  I,J,K,L  (1x)
Biol. Unit 4:  M,N,O,P  (1x)
Keywords :  Apoptosis, Disc, Fas, Fadd, Membrane, Receptor, Transmembrane (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  F. L. Scott, B. Stec, C. Pop, M. K. Dobaczewska, J. J. Lee, E. Monosov, H. Robinson, G. S. Salvesen, R. Schwarzenbacher, S. J. Riedl
The Fas-Fadd Death Domain Complex Structure Unravels Signalling By Receptor Clustering
Nature V. 457 1019 2009
PubMed-ID: 19118384  |  Reference-DOI: 10.1038/NATURE07606

(-) Compounds

Molecule 1 - TUMOR NECROSIS FACTOR RECEPTOR SUPERFAMILY MEMBER 6
    ChainsA, C, E, G, I, K, M, O
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System PlasmidPET15
    Expression System StrainBL21
    Expression System Taxid562
    Expression System Vector TypePLASMID
    FragmentFAS DD, UNP RESIDUES 223-335
    GeneFAS, APT1, FAS1, TNFRSF6
    Organism CommonHUMAN
    Organism ScientificHOMO SAPIENS
    Organism Taxid9606
    SynonymFASLG RECEPTOR, APOPTOSIS-MEDIATING SURFACE ANTIGEN FAS, APO-1 ANTIGEN, CD95 ANTIGEN
 
Molecule 2 - PROTEIN FADD
    ChainsB, D, F, H, J, L, N, P
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System PlasmidPET15
    Expression System StrainBL21
    Expression System Taxid562
    Expression System Vector TypePLASMID
    FragmentFADD DD, UNP RESIDUES 93-208
    GeneFADD, MORT1
    Organism CommonHUMAN
    Organism ScientificHOMO SAPIENS
    Organism Taxid9606
    SynonymFAS-ASSOCIATED DEATH DOMAIN PROTEIN, FAS-ASSOCIATING DEATH DOMAIN-CONTAINING PROTEIN, MEDIATOR OF RECEPTOR INDUCED TOXICITY

 Structural Features

(-) Chains, Units

  12345678910111213141516
Asymmetric Unit ABCDEFGHIJKLMNOP
Biological Unit 1 (1x)ABCD            
Biological Unit 2 (1x)    EFGH        
Biological Unit 3 (1x)        IJKL    
Biological Unit 4 (1x)            MNOP

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 20)

Asymmetric Unit (2, 20)
No.NameCountTypeFull Name
1NA8Ligand/IonSODIUM ION
2SO412Ligand/IonSULFATE ION
Biological Unit 1 (1, 2)
No.NameCountTypeFull Name
1NA-1Ligand/IonSODIUM ION
2SO42Ligand/IonSULFATE ION
Biological Unit 2 (1, 3)
No.NameCountTypeFull Name
1NA-1Ligand/IonSODIUM ION
2SO43Ligand/IonSULFATE ION
Biological Unit 3 (1, 4)
No.NameCountTypeFull Name
1NA-1Ligand/IonSODIUM ION
2SO44Ligand/IonSULFATE ION
Biological Unit 4 (1, 3)
No.NameCountTypeFull Name
1NA-1Ligand/IonSODIUM ION
2SO43Ligand/IonSULFATE ION

(-) Sites  (16, 16)

Asymmetric Unit (16, 16)
No.NameEvidenceResiduesDescription
01AC1SOFTWARETHR A:241 , LEU A:242 , LYS A:274BINDING SITE FOR RESIDUE SO4 A 10
02AC2SOFTWAREGLU B:179BINDING SITE FOR RESIDUE NA B 21
03AC3SOFTWARETHR C:241 , LEU C:242 , THR C:270 , LYS C:274BINDING SITE FOR RESIDUE SO4 C 7
04AC4SOFTWARETHR E:241 , LEU E:242 , THR E:270 , LYS E:274BINDING SITE FOR RESIDUE SO4 E 1
05AC5SOFTWARELYS E:231 , LYS G:231BINDING SITE FOR RESIDUE SO4 E 11
06AC6SOFTWAREMET G:240 , THR G:241 , LEU G:242 , THR G:270 , LYS G:274BINDING SITE FOR RESIDUE SO4 G 2
07AC7SOFTWAREGLU H:179 , GLN H:182BINDING SITE FOR RESIDUE NA H 20
08AC8SOFTWARETHR I:241 , LEU I:242 , THR I:270 , LYS I:274BINDING SITE FOR RESIDUE SO4 I 6
09AC9SOFTWAREGLU J:95 , ARG J:184BINDING SITE FOR RESIDUE SO4 J 8
10BC1SOFTWAREGLU J:179 , GLN J:182BINDING SITE FOR RESIDUE NA J 19
11BC2SOFTWARETHR K:241 , LEU K:242 , LYS K:274BINDING SITE FOR RESIDUE SO4 K 3
12BC3SOFTWAREASN K:324 , ASN K:326 , PHE K:327 , GLU K:330BINDING SITE FOR RESIDUE SO4 K 13
13BC4SOFTWAREMET M:240 , THR M:241 , LEU M:242 , LYS M:274BINDING SITE FOR RESIDUE SO4 M 9
14BC5SOFTWARELYS M:316 , ASN M:324 , ASN M:326 , PHE M:327 , GLU M:330BINDING SITE FOR RESIDUE SO4 M 12
15BC6SOFTWARETHR O:241 , LEU O:242 , THR O:270 , LYS O:274BINDING SITE FOR RESIDUE SO4 O 4
16BC7SOFTWAREGLU P:179BINDING SITE FOR RESIDUE NA P 18

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 3EZQ)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 3EZQ)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (25, 200)

Asymmetric Unit (25, 200)
  dbSNPPDB
No.SourceVariant IDVariantUniProt IDStatusIDChainVariant
01UniProtVAR_065124C105WFADD_HUMANDisease (IEHDCM)387906839B/D/F/H/J/L/N/PC105W
02UniProtVAR_013423Y232CTNR6_HUMANDisease (ALPS1A)121913079A/C/E/G/I/K/M/OY232C
03UniProtVAR_013424T241KTNR6_HUMANDisease (ALPS1A)201072885A/C/E/G/I/K/M/OT241K
04UniProtVAR_013425T241PTNR6_HUMANDisease (ALPS1A)121913076A/C/E/G/I/K/M/OT241P
05UniProtVAR_065128V249LTNR6_HUMANDisease (ALPS1A)  ---A/C/E/G/I/K/M/OV249L
06UniProtVAR_013426R250PTNR6_HUMANDisease (ALPS1A)121913080A/C/E/G/I/K/M/OR250P
07UniProtVAR_013427R250QTNR6_HUMANDisease (ALPS1A)  ---A/C/E/G/I/K/M/OR250Q
08UniProtVAR_065129G253DTNR6_HUMANDisease (ALPS1A)  ---A/C/E/G/I/K/M/OG253D
09UniProtVAR_065130G253STNR6_HUMANDisease (ALPS1A)  ---A/C/E/G/I/K/M/OG253S
10UniProtVAR_018323N255DTNR6_HUMANUnclassified121913082A/C/E/G/I/K/M/ON255D
11UniProtVAR_013428A257DTNR6_HUMANDisease (ALPS1A)  ---A/C/E/G/I/K/M/OA257D
12UniProtVAR_065131I259RTNR6_HUMANDisease (ALPS1A)  ---A/C/E/G/I/K/M/OI259R
13UniProtVAR_013429D260GTNR6_HUMANDisease (ALPS1A)  ---A/C/E/G/I/K/M/OD260G
14UniProtVAR_013431D260VTNR6_HUMANDisease (ALPS1A)28929498A/C/E/G/I/K/M/OD260V
15UniProtVAR_013430D260YTNR6_HUMANDisease (ALPS1A)121913086A/C/E/G/I/K/M/OD260Y
16UniProtVAR_058910I262STNR6_HUMANDisease (ALPS1A)  ---A/C/E/G/I/K/M/OI262S
17UniProtVAR_013432N264KTNR6_HUMANUnclassified  ---A/C/E/G/I/K/M/ON264K
18UniProtVAR_013433T270ITNR6_HUMANDisease (ALPS1A)121913081A/C/E/G/I/K/M/OT270I
19UniProtVAR_065132T270KTNR6_HUMANDisease (ALPS1A)  ---A/C/E/G/I/K/M/OT270K
20UniProtVAR_013434E272GTNR6_HUMANDisease (ALPS1A)  ---A/C/E/G/I/K/M/OE272G
21UniProtVAR_013435E272KTNR6_HUMANDisease (ALPS1A)  ---A/C/E/G/I/K/M/OE272K
22UniProtVAR_013436L278FTNR6_HUMANUnclassified  ---A/C/E/G/I/K/M/OL278F
23UniProtVAR_013437K299NTNR6_HUMANUnclassified  ---A/C/E/G/I/K/M/OK299N
24UniProtVAR_020942T305ITNR6_HUMANPolymorphism3218611A/C/E/G/I/K/M/OT305I
25UniProtVAR_013438I310STNR6_HUMANDisease (ALPS1A)  ---A/C/E/G/I/K/M/OI310S

  SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)
Biological Unit 1 (25, 50)
  dbSNPPDB
No.SourceVariant IDVariantUniProt IDStatusIDChainVariant
01UniProtVAR_065124C105WFADD_HUMANDisease (IEHDCM)387906839B/DC105W
02UniProtVAR_013423Y232CTNR6_HUMANDisease (ALPS1A)121913079A/CY232C
03UniProtVAR_013424T241KTNR6_HUMANDisease (ALPS1A)201072885A/CT241K
04UniProtVAR_013425T241PTNR6_HUMANDisease (ALPS1A)121913076A/CT241P
05UniProtVAR_065128V249LTNR6_HUMANDisease (ALPS1A)  ---A/CV249L
06UniProtVAR_013426R250PTNR6_HUMANDisease (ALPS1A)121913080A/CR250P
07UniProtVAR_013427R250QTNR6_HUMANDisease (ALPS1A)  ---A/CR250Q
08UniProtVAR_065129G253DTNR6_HUMANDisease (ALPS1A)  ---A/CG253D
09UniProtVAR_065130G253STNR6_HUMANDisease (ALPS1A)  ---A/CG253S
10UniProtVAR_018323N255DTNR6_HUMANUnclassified121913082A/CN255D
11UniProtVAR_013428A257DTNR6_HUMANDisease (ALPS1A)  ---A/CA257D
12UniProtVAR_065131I259RTNR6_HUMANDisease (ALPS1A)  ---A/CI259R
13UniProtVAR_013429D260GTNR6_HUMANDisease (ALPS1A)  ---A/CD260G
14UniProtVAR_013431D260VTNR6_HUMANDisease (ALPS1A)28929498A/CD260V
15UniProtVAR_013430D260YTNR6_HUMANDisease (ALPS1A)121913086A/CD260Y
16UniProtVAR_058910I262STNR6_HUMANDisease (ALPS1A)  ---A/CI262S
17UniProtVAR_013432N264KTNR6_HUMANUnclassified  ---A/CN264K
18UniProtVAR_013433T270ITNR6_HUMANDisease (ALPS1A)121913081A/CT270I
19UniProtVAR_065132T270KTNR6_HUMANDisease (ALPS1A)  ---A/CT270K
20UniProtVAR_013434E272GTNR6_HUMANDisease (ALPS1A)  ---A/CE272G
21UniProtVAR_013435E272KTNR6_HUMANDisease (ALPS1A)  ---A/CE272K
22UniProtVAR_013436L278FTNR6_HUMANUnclassified  ---A/CL278F
23UniProtVAR_013437K299NTNR6_HUMANUnclassified  ---A/CK299N
24UniProtVAR_020942T305ITNR6_HUMANPolymorphism3218611A/CT305I
25UniProtVAR_013438I310STNR6_HUMANDisease (ALPS1A)  ---A/CI310S

  SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)
Biological Unit 2 (25, 50)
  dbSNPPDB
No.SourceVariant IDVariantUniProt IDStatusIDChainVariant
01UniProtVAR_065124C105WFADD_HUMANDisease (IEHDCM)387906839F/HC105W
02UniProtVAR_013423Y232CTNR6_HUMANDisease (ALPS1A)121913079E/GY232C
03UniProtVAR_013424T241KTNR6_HUMANDisease (ALPS1A)201072885E/GT241K
04UniProtVAR_013425T241PTNR6_HUMANDisease (ALPS1A)121913076E/GT241P
05UniProtVAR_065128V249LTNR6_HUMANDisease (ALPS1A)  ---E/GV249L
06UniProtVAR_013426R250PTNR6_HUMANDisease (ALPS1A)121913080E/GR250P
07UniProtVAR_013427R250QTNR6_HUMANDisease (ALPS1A)  ---E/GR250Q
08UniProtVAR_065129G253DTNR6_HUMANDisease (ALPS1A)  ---E/GG253D
09UniProtVAR_065130G253STNR6_HUMANDisease (ALPS1A)  ---E/GG253S
10UniProtVAR_018323N255DTNR6_HUMANUnclassified121913082E/GN255D
11UniProtVAR_013428A257DTNR6_HUMANDisease (ALPS1A)  ---E/GA257D
12UniProtVAR_065131I259RTNR6_HUMANDisease (ALPS1A)  ---E/GI259R
13UniProtVAR_013429D260GTNR6_HUMANDisease (ALPS1A)  ---E/GD260G
14UniProtVAR_013431D260VTNR6_HUMANDisease (ALPS1A)28929498E/GD260V
15UniProtVAR_013430D260YTNR6_HUMANDisease (ALPS1A)121913086E/GD260Y
16UniProtVAR_058910I262STNR6_HUMANDisease (ALPS1A)  ---E/GI262S
17UniProtVAR_013432N264KTNR6_HUMANUnclassified  ---E/GN264K
18UniProtVAR_013433T270ITNR6_HUMANDisease (ALPS1A)121913081E/GT270I
19UniProtVAR_065132T270KTNR6_HUMANDisease (ALPS1A)  ---E/GT270K
20UniProtVAR_013434E272GTNR6_HUMANDisease (ALPS1A)  ---E/GE272G
21UniProtVAR_013435E272KTNR6_HUMANDisease (ALPS1A)  ---E/GE272K
22UniProtVAR_013436L278FTNR6_HUMANUnclassified  ---E/GL278F
23UniProtVAR_013437K299NTNR6_HUMANUnclassified  ---E/GK299N
24UniProtVAR_020942T305ITNR6_HUMANPolymorphism3218611E/GT305I
25UniProtVAR_013438I310STNR6_HUMANDisease (ALPS1A)  ---E/GI310S

  SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)
Biological Unit 3 (25, 50)
  dbSNPPDB
No.SourceVariant IDVariantUniProt IDStatusIDChainVariant
01UniProtVAR_065124C105WFADD_HUMANDisease (IEHDCM)387906839J/LC105W
02UniProtVAR_013423Y232CTNR6_HUMANDisease (ALPS1A)121913079I/KY232C
03UniProtVAR_013424T241KTNR6_HUMANDisease (ALPS1A)201072885I/KT241K
04UniProtVAR_013425T241PTNR6_HUMANDisease (ALPS1A)121913076I/KT241P
05UniProtVAR_065128V249LTNR6_HUMANDisease (ALPS1A)  ---I/KV249L
06UniProtVAR_013426R250PTNR6_HUMANDisease (ALPS1A)121913080I/KR250P
07UniProtVAR_013427R250QTNR6_HUMANDisease (ALPS1A)  ---I/KR250Q
08UniProtVAR_065129G253DTNR6_HUMANDisease (ALPS1A)  ---I/KG253D
09UniProtVAR_065130G253STNR6_HUMANDisease (ALPS1A)  ---I/KG253S
10UniProtVAR_018323N255DTNR6_HUMANUnclassified121913082I/KN255D
11UniProtVAR_013428A257DTNR6_HUMANDisease (ALPS1A)  ---I/KA257D
12UniProtVAR_065131I259RTNR6_HUMANDisease (ALPS1A)  ---I/KI259R
13UniProtVAR_013429D260GTNR6_HUMANDisease (ALPS1A)  ---I/KD260G
14UniProtVAR_013431D260VTNR6_HUMANDisease (ALPS1A)28929498I/KD260V
15UniProtVAR_013430D260YTNR6_HUMANDisease (ALPS1A)121913086I/KD260Y
16UniProtVAR_058910I262STNR6_HUMANDisease (ALPS1A)  ---I/KI262S
17UniProtVAR_013432N264KTNR6_HUMANUnclassified  ---I/KN264K
18UniProtVAR_013433T270ITNR6_HUMANDisease (ALPS1A)121913081I/KT270I
19UniProtVAR_065132T270KTNR6_HUMANDisease (ALPS1A)  ---I/KT270K
20UniProtVAR_013434E272GTNR6_HUMANDisease (ALPS1A)  ---I/KE272G
21UniProtVAR_013435E272KTNR6_HUMANDisease (ALPS1A)  ---I/KE272K
22UniProtVAR_013436L278FTNR6_HUMANUnclassified  ---I/KL278F
23UniProtVAR_013437K299NTNR6_HUMANUnclassified  ---I/KK299N
24UniProtVAR_020942T305ITNR6_HUMANPolymorphism3218611I/KT305I
25UniProtVAR_013438I310STNR6_HUMANDisease (ALPS1A)  ---I/KI310S

  SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)
Biological Unit 4 (25, 50)
  dbSNPPDB
No.SourceVariant IDVariantUniProt IDStatusIDChainVariant
01UniProtVAR_065124C105WFADD_HUMANDisease (IEHDCM)387906839N/PC105W
02UniProtVAR_013423Y232CTNR6_HUMANDisease (ALPS1A)121913079M/OY232C
03UniProtVAR_013424T241KTNR6_HUMANDisease (ALPS1A)201072885M/OT241K
04UniProtVAR_013425T241PTNR6_HUMANDisease (ALPS1A)121913076M/OT241P
05UniProtVAR_065128V249LTNR6_HUMANDisease (ALPS1A)  ---M/OV249L
06UniProtVAR_013426R250PTNR6_HUMANDisease (ALPS1A)121913080M/OR250P
07UniProtVAR_013427R250QTNR6_HUMANDisease (ALPS1A)  ---M/OR250Q
08UniProtVAR_065129G253DTNR6_HUMANDisease (ALPS1A)  ---M/OG253D
09UniProtVAR_065130G253STNR6_HUMANDisease (ALPS1A)  ---M/OG253S
10UniProtVAR_018323N255DTNR6_HUMANUnclassified121913082M/ON255D
11UniProtVAR_013428A257DTNR6_HUMANDisease (ALPS1A)  ---M/OA257D
12UniProtVAR_065131I259RTNR6_HUMANDisease (ALPS1A)  ---M/OI259R
13UniProtVAR_013429D260GTNR6_HUMANDisease (ALPS1A)  ---M/OD260G
14UniProtVAR_013431D260VTNR6_HUMANDisease (ALPS1A)28929498M/OD260V
15UniProtVAR_013430D260YTNR6_HUMANDisease (ALPS1A)121913086M/OD260Y
16UniProtVAR_058910I262STNR6_HUMANDisease (ALPS1A)  ---M/OI262S
17UniProtVAR_013432N264KTNR6_HUMANUnclassified  ---M/ON264K
18UniProtVAR_013433T270ITNR6_HUMANDisease (ALPS1A)121913081M/OT270I
19UniProtVAR_065132T270KTNR6_HUMANDisease (ALPS1A)  ---M/OT270K
20UniProtVAR_013434E272GTNR6_HUMANDisease (ALPS1A)  ---M/OE272G
21UniProtVAR_013435E272KTNR6_HUMANDisease (ALPS1A)  ---M/OE272K
22UniProtVAR_013436L278FTNR6_HUMANUnclassified  ---M/OL278F
23UniProtVAR_013437K299NTNR6_HUMANUnclassified  ---M/OK299N
24UniProtVAR_020942T305ITNR6_HUMANPolymorphism3218611M/OT305I
25UniProtVAR_013438I310STNR6_HUMANDisease (ALPS1A)  ---M/OI310S

  SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

(-) PROSITE Motifs  (1, 16)

Asymmetric Unit (1, 16)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1DEATH_DOMAINPS50017 Death domain profile.FADD_HUMAN97-181
 
 
 
 
 
 
 
  8B:97-181
D:97-181
F:97-181
H:97-181
J:97-181
L:97-181
N:97-181
P:97-181
TNR6_HUMAN230-314
 
 
 
 
 
 
 
  8A:230-314
C:230-314
E:230-314
G:230-314
I:230-314
K:230-314
M:230-314
O:230-314
Biological Unit 1 (1, 4)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1DEATH_DOMAINPS50017 Death domain profile.FADD_HUMAN97-181
 
 
 
 
 
 
 
  2B:97-181
D:97-181
-
-
-
-
-
-
TNR6_HUMAN230-314
 
 
 
 
 
 
 
  2A:230-314
C:230-314
-
-
-
-
-
-
Biological Unit 2 (1, 4)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1DEATH_DOMAINPS50017 Death domain profile.FADD_HUMAN97-181
 
 
 
 
 
 
 
  2-
-
F:97-181
H:97-181
-
-
-
-
TNR6_HUMAN230-314
 
 
 
 
 
 
 
  2-
-
E:230-314
G:230-314
-
-
-
-
Biological Unit 3 (1, 4)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1DEATH_DOMAINPS50017 Death domain profile.FADD_HUMAN97-181
 
 
 
 
 
 
 
  2-
-
-
-
J:97-181
L:97-181
-
-
TNR6_HUMAN230-314
 
 
 
 
 
 
 
  2-
-
-
-
I:230-314
K:230-314
-
-
Biological Unit 4 (1, 4)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1DEATH_DOMAINPS50017 Death domain profile.FADD_HUMAN97-181
 
 
 
 
 
 
 
  2-
-
-
-
-
-
N:97-181
P:97-181
TNR6_HUMAN230-314
 
 
 
 
 
 
 
  2-
-
-
-
-
-
M:230-314
O:230-314

(-) Exons   (4, 32)

Asymmetric Unit (4, 32)
 ENSEMBLUniProtKBPDB
No.Transcript IDExonExon IDGenome LocationLengthIDLocationLengthCountLocationLength
1.1ENST000003018381ENSE00001119659chr11:70049269-70049851583FADD_HUMAN1-96968B:93-96
D:93-96
F:93-96
H:93-96
J:93-96
L:93-96
N:93-96
P:93-96
4
4
4
4
4
4
4
4
1.2ENST000003018382ENSE00001119658chr11:70052239-700534961258FADD_HUMAN96-2081138B:96-191
D:96-191
F:96-191
H:96-191
J:96-191
L:96-191
N:96-191
P:96-191
96
96
96
96
96
96
96
96

2.2aENST000003557402aENSE00001857233chr10:90750414-90750663250TNR6_HUMAN1-10100--
2.4ENST000003557404ENSE00001271543chr10:90762786-90762951166TNR6_HUMAN11-66560--
2.5ENST000003557405ENSE00000810604chr10:90767457-90767594138TNR6_HUMAN66-112470--
2.6ENST000003557406ENSE00000810606chr10:90768646-90768754109TNR6_HUMAN112-148370--
2.7aENST000003557407aENSE00001743001chr10:90770296-9077035762TNR6_HUMAN148-169220--
2.7dENST000003557407dENSE00001686407chr10:90770510-9077057263TNR6_HUMAN169-190220--
2.8ENST000003557408ENSE00001721137chr10:90771756-9077183883TNR6_HUMAN190-217280--
2.10ENST0000035574010ENSE00001742441chr10:90773100-9077312425TNR6_HUMAN218-22698A:223-226
C:223-226
E:223-226
G:223-226
I:223-226
K:223-226
M:223-226
O:223-226
4
4
4
4
4
4
4
4
2.11hENST0000035574011hENSE00001716028chr10:90773876-907755421667TNR6_HUMAN226-3351108A:226-335
C:226-335
E:226-335
G:226-335
I:226-335
K:226-335
M:226-335
O:226-335
110
110
110
110
110
110
110
110

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain A from PDB  Type:PROTEIN  Length:115
 aligned with TNR6_HUMAN | P25445 from UniProtKB/Swiss-Prot  Length:335

    Alignment length:115
                                                                                                                                          335  
                                   232       242       252       262       272       282       292       302       312       322       332  |  
           TNR6_HUMAN   223 NLSDVDLSKYITTIAGVMTLSQVKGFVRKNGVNEAKIDEIKNDNVQDTAEQKVQLLRNWHQLHGKKEAYDTLIKDLKKANLCTLAEKIQTIILKDITSDSENSNFRNEIQSLV--   -
               SCOP domains d3ezqa_ A: automated matches                                                                                        SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhh.hhhhhhhhhhhh..hhhhhhhhhhhh..hhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhh.. Sec.struct. author
             SAPs(SNPs) (1) ---------C--------K-------LP--D-D-D-RG-S-K-----I-G-----F--------------------N-----I----S--------------------------- SAPs(SNPs) (1)
             SAPs(SNPs) (2) ------------------P--------Q--S------V---------K-K----------------------------------------------------------------- SAPs(SNPs) (2)
             SAPs(SNPs) (3) -------------------------------------Y----------------------------------------------------------------------------- SAPs(SNPs) (3)
                    PROSITE -------DEATH_DOMAIN  PDB: A:230-314 UniProt: 230-314                                        ----------------------- PROSITE
           Transcript 2 (1) 2.10--------------------------------------------------------------------------------------------------------------- Transcript 2 (1)
           Transcript 2 (2) ---Exon 2.11h  PDB: A:226-335 UniProt: 226-335                                                                   -- Transcript 2 (2)
                 3ezq A 223 NLSDVDLSKYITTIAGVMTLSQVKGFVRKNGVNEAKIDEIKNDNVQDTAEQKVQLLRNWHQLHGKKEAYDTLIKDLKKANLCTLAEKIQTIILKDITSDSENSNFRNEIQSLVLE 337
                                   232       242       252       262       272       282       292       302       312       322       332     

Chain B from PDB  Type:PROTEIN  Length:99
 aligned with FADD_HUMAN | Q13158 from UniProtKB/Swiss-Prot  Length:208

    Alignment length:99
                                   102       112       122       132       142       152       162       172       182         
           FADD_HUMAN    93 GEEDLCAAFNVICDNVGKDWRRLARQLKVSDTKIDSIEDRYPRNLTERVRESLRIWKNTEKENATVAHLVGALRSCQMNLVADLVQEVQQARDLQNRSG 191
               SCOP domains d3ezqb_ B: FADD (Mort1)                                                                             SCOP domains
               CATH domains 3ezqB00 B:93-191 Death Domain, Fas                                                                  CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhh....hhhhhhhhh..hhhhhhhhhhhh..hhhhhhhhhhhhhhhhh....hhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------W-------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----DEATH_DOMAIN  PDB: B:97-181 UniProt: 97-181                                          ---------- PROSITE
           Transcript 1 (1) 1.1 ----------------------------------------------------------------------------------------------- Transcript 1 (1)
           Transcript 1 (2) ---Exon 1.2  PDB: B:96-191 UniProt: 96-208 [INCOMPLETE]                                             Transcript 1 (2)
                 3ezq B  93 GEEDLCAAFNVICDNVGKDWRRLARQLKVSDTKIDSIEDRYPRNLTERVRESLRIWKNTEKENATVAHLVGALRSCQMNLVADLVQEVQQARDLQNRSG 191
                                   102       112       122       132       142       152       162       172       182         

Chain C from PDB  Type:PROTEIN  Length:115
 aligned with TNR6_HUMAN | P25445 from UniProtKB/Swiss-Prot  Length:335

    Alignment length:115
                                                                                                                                          335  
                                   232       242       252       262       272       282       292       302       312       322       332  |  
           TNR6_HUMAN   223 NLSDVDLSKYITTIAGVMTLSQVKGFVRKNGVNEAKIDEIKNDNVQDTAEQKVQLLRNWHQLHGKKEAYDTLIKDLKKANLCTLAEKIQTIILKDITSDSENSNFRNEIQSLV--   -
               SCOP domains d3ezqc_ C: automated matches                                                                                        SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhh.hhhhhhhhhhhh..hhhhhhhhhhhh..hhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhh.. Sec.struct. author
             SAPs(SNPs) (1) ---------C--------K-------LP--D-D-D-RG-S-K-----I-G-----F--------------------N-----I----S--------------------------- SAPs(SNPs) (1)
             SAPs(SNPs) (2) ------------------P--------Q--S------V---------K-K----------------------------------------------------------------- SAPs(SNPs) (2)
             SAPs(SNPs) (3) -------------------------------------Y----------------------------------------------------------------------------- SAPs(SNPs) (3)
                    PROSITE -------DEATH_DOMAIN  PDB: C:230-314 UniProt: 230-314                                        ----------------------- PROSITE
           Transcript 2 (1) 2.10--------------------------------------------------------------------------------------------------------------- Transcript 2 (1)
           Transcript 2 (2) ---Exon 2.11h  PDB: C:226-335 UniProt: 226-335                                                                   -- Transcript 2 (2)
                 3ezq C 223 NLSDVDLSKYITTIAGVMTLSQVKGFVRKNGVNEAKIDEIKNDNVQDTAEQKVQLLRNWHQLHGKKEAYDTLIKDLKKANLCTLAEKIQTIILKDITSDSENSNFRNEIQSLVLE 337
                                   232       242       252       262       272       282       292       302       312       322       332     

Chain D from PDB  Type:PROTEIN  Length:99
 aligned with FADD_HUMAN | Q13158 from UniProtKB/Swiss-Prot  Length:208

    Alignment length:99
                                   102       112       122       132       142       152       162       172       182         
           FADD_HUMAN    93 GEEDLCAAFNVICDNVGKDWRRLARQLKVSDTKIDSIEDRYPRNLTERVRESLRIWKNTEKENATVAHLVGALRSCQMNLVADLVQEVQQARDLQNRSG 191
               SCOP domains d3ezqd_ D: FADD (Mort1)                                                                             SCOP domains
               CATH domains 3ezqD00 D:93-191 Death Domain, Fas                                                                  CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhh....hhhhhhhhh..hhhhhhhhhhhh..hhhhhhhhhhhhhhhhh....hhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------W-------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----DEATH_DOMAIN  PDB: D:97-181 UniProt: 97-181                                          ---------- PROSITE
           Transcript 1 (1) 1.1 ----------------------------------------------------------------------------------------------- Transcript 1 (1)
           Transcript 1 (2) ---Exon 1.2  PDB: D:96-191 UniProt: 96-208 [INCOMPLETE]                                             Transcript 1 (2)
                 3ezq D  93 GEEDLCAAFNVICDNVGKDWRRLARQLKVSDTKIDSIEDRYPRNLTERVRESLRIWKNTEKENATVAHLVGALRSCQMNLVADLVQEVQQARDLQNRSG 191
                                   102       112       122       132       142       152       162       172       182         

Chain E from PDB  Type:PROTEIN  Length:115
 aligned with TNR6_HUMAN | P25445 from UniProtKB/Swiss-Prot  Length:335

    Alignment length:115
                                                                                                                                          335  
                                   232       242       252       262       272       282       292       302       312       322       332  |  
           TNR6_HUMAN   223 NLSDVDLSKYITTIAGVMTLSQVKGFVRKNGVNEAKIDEIKNDNVQDTAEQKVQLLRNWHQLHGKKEAYDTLIKDLKKANLCTLAEKIQTIILKDITSDSENSNFRNEIQSLV--   -
               SCOP domains d3ezqe_ E: automated matches                                                                                        SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhh..hhhhhhhhhhhh..hhhhhhhhhhhh..hhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhh.. Sec.struct. author
             SAPs(SNPs) (1) ---------C--------K-------LP--D-D-D-RG-S-K-----I-G-----F--------------------N-----I----S--------------------------- SAPs(SNPs) (1)
             SAPs(SNPs) (2) ------------------P--------Q--S------V---------K-K----------------------------------------------------------------- SAPs(SNPs) (2)
             SAPs(SNPs) (3) -------------------------------------Y----------------------------------------------------------------------------- SAPs(SNPs) (3)
                    PROSITE -------DEATH_DOMAIN  PDB: E:230-314 UniProt: 230-314                                        ----------------------- PROSITE
           Transcript 2 (1) 2.10--------------------------------------------------------------------------------------------------------------- Transcript 2 (1)
           Transcript 2 (2) ---Exon 2.11h  PDB: E:226-335 UniProt: 226-335                                                                   -- Transcript 2 (2)
                 3ezq E 223 NLSDVDLSKYITTIAGVMTLSQVKGFVRKNGVNEAKIDEIKNDNVQDTAEQKVQLLRNWHQLHGKKEAYDTLIKDLKKANLCTLAEKIQTIILKDITSDSENSNFRNEIQSLVLE 337
                                   232       242       252       262       272       282       292       302       312       322       332     

Chain F from PDB  Type:PROTEIN  Length:99
 aligned with FADD_HUMAN | Q13158 from UniProtKB/Swiss-Prot  Length:208

    Alignment length:99
                                   102       112       122       132       142       152       162       172       182         
           FADD_HUMAN    93 GEEDLCAAFNVICDNVGKDWRRLARQLKVSDTKIDSIEDRYPRNLTERVRESLRIWKNTEKENATVAHLVGALRSCQMNLVADLVQEVQQARDLQNRSG 191
               SCOP domains d3ezqf_ F: FADD (Mort1)                                                                             SCOP domains
               CATH domains 3ezqF00 F:93-191 Death Domain, Fas                                                                  CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhh....hhhhhhhhh..hhhhhhhhhhhh..hhhhhhhhhhhhhhhhh....hhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------W-------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----DEATH_DOMAIN  PDB: F:97-181 UniProt: 97-181                                          ---------- PROSITE
           Transcript 1 (1) 1.1 ----------------------------------------------------------------------------------------------- Transcript 1 (1)
           Transcript 1 (2) ---Exon 1.2  PDB: F:96-191 UniProt: 96-208 [INCOMPLETE]                                             Transcript 1 (2)
                 3ezq F  93 GEEDLCAAFNVICDNVGKDWRRLARQLKVSDTKIDSIEDRYPRNLTERVRESLRIWKNTEKENATVAHLVGALRSCQMNLVADLVQEVQQARDLQNRSG 191
                                   102       112       122       132       142       152       162       172       182         

Chain G from PDB  Type:PROTEIN  Length:115
 aligned with TNR6_HUMAN | P25445 from UniProtKB/Swiss-Prot  Length:335

    Alignment length:115
                                                                                                                                          335  
                                   232       242       252       262       272       282       292       302       312       322       332  |  
           TNR6_HUMAN   223 NLSDVDLSKYITTIAGVMTLSQVKGFVRKNGVNEAKIDEIKNDNVQDTAEQKVQLLRNWHQLHGKKEAYDTLIKDLKKANLCTLAEKIQTIILKDITSDSENSNFRNEIQSLV--   -
               SCOP domains d3ezqg_ G: automated matches                                                                                        SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhh.hhhhhhhhhhhh..hhhhhhhhhhhh..hhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhh.. Sec.struct. author
             SAPs(SNPs) (1) ---------C--------K-------LP--D-D-D-RG-S-K-----I-G-----F--------------------N-----I----S--------------------------- SAPs(SNPs) (1)
             SAPs(SNPs) (2) ------------------P--------Q--S------V---------K-K----------------------------------------------------------------- SAPs(SNPs) (2)
             SAPs(SNPs) (3) -------------------------------------Y----------------------------------------------------------------------------- SAPs(SNPs) (3)
                    PROSITE -------DEATH_DOMAIN  PDB: G:230-314 UniProt: 230-314                                        ----------------------- PROSITE
           Transcript 2 (1) 2.10--------------------------------------------------------------------------------------------------------------- Transcript 2 (1)
           Transcript 2 (2) ---Exon 2.11h  PDB: G:226-335 UniProt: 226-335                                                                   -- Transcript 2 (2)
                 3ezq G 223 NLSDVDLSKYITTIAGVMTLSQVKGFVRKNGVNEAKIDEIKNDNVQDTAEQKVQLLRNWHQLHGKKEAYDTLIKDLKKANLCTLAEKIQTIILKDITSDSENSNFRNEIQSLVLE 337
                                   232       242       252       262       272       282       292       302       312       322       332     

Chain H from PDB  Type:PROTEIN  Length:99
 aligned with FADD_HUMAN | Q13158 from UniProtKB/Swiss-Prot  Length:208

    Alignment length:99
                                   102       112       122       132       142       152       162       172       182         
           FADD_HUMAN    93 GEEDLCAAFNVICDNVGKDWRRLARQLKVSDTKIDSIEDRYPRNLTERVRESLRIWKNTEKENATVAHLVGALRSCQMNLVADLVQEVQQARDLQNRSG 191
               SCOP domains d3ezqh_ H: FADD (Mort1)                                                                             SCOP domains
               CATH domains 3ezqH00 H:93-191 Death Domain, Fas                                                                  CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhh....hhhhhhhhh..hhhhhhhhhhhh..hhhhhhhhhhhhhhhhh....hhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------W-------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----DEATH_DOMAIN  PDB: H:97-181 UniProt: 97-181                                          ---------- PROSITE
           Transcript 1 (1) 1.1 ----------------------------------------------------------------------------------------------- Transcript 1 (1)
           Transcript 1 (2) ---Exon 1.2  PDB: H:96-191 UniProt: 96-208 [INCOMPLETE]                                             Transcript 1 (2)
                 3ezq H  93 GEEDLCAAFNVICDNVGKDWRRLARQLKVSDTKIDSIEDRYPRNLTERVRESLRIWKNTEKENATVAHLVGALRSCQMNLVADLVQEVQQARDLQNRSG 191
                                   102       112       122       132       142       152       162       172       182         

Chain I from PDB  Type:PROTEIN  Length:115
 aligned with TNR6_HUMAN | P25445 from UniProtKB/Swiss-Prot  Length:335

    Alignment length:115
                                                                                                                                          335  
                                   232       242       252       262       272       282       292       302       312       322       332  |  
           TNR6_HUMAN   223 NLSDVDLSKYITTIAGVMTLSQVKGFVRKNGVNEAKIDEIKNDNVQDTAEQKVQLLRNWHQLHGKKEAYDTLIKDLKKANLCTLAEKIQTIILKDITSDSENSNFRNEIQSLV--   -
               SCOP domains d3ezqi_ I: automated matches                                                                                        SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhh..hhhhhhhhhhhh..hhhhhhhhhhhh..hhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhh.. Sec.struct. author
             SAPs(SNPs) (1) ---------C--------K-------LP--D-D-D-RG-S-K-----I-G-----F--------------------N-----I----S--------------------------- SAPs(SNPs) (1)
             SAPs(SNPs) (2) ------------------P--------Q--S------V---------K-K----------------------------------------------------------------- SAPs(SNPs) (2)
             SAPs(SNPs) (3) -------------------------------------Y----------------------------------------------------------------------------- SAPs(SNPs) (3)
                    PROSITE -------DEATH_DOMAIN  PDB: I:230-314 UniProt: 230-314                                        ----------------------- PROSITE
           Transcript 2 (1) 2.10--------------------------------------------------------------------------------------------------------------- Transcript 2 (1)
           Transcript 2 (2) ---Exon 2.11h  PDB: I:226-335 UniProt: 226-335                                                                   -- Transcript 2 (2)
                 3ezq I 223 NLSDVDLSKYITTIAGVMTLSQVKGFVRKNGVNEAKIDEIKNDNVQDTAEQKVQLLRNWHQLHGKKEAYDTLIKDLKKANLCTLAEKIQTIILKDITSDSENSNFRNEIQSLVLE 337
                                   232       242       252       262       272       282       292       302       312       322       332     

Chain J from PDB  Type:PROTEIN  Length:99
 aligned with FADD_HUMAN | Q13158 from UniProtKB/Swiss-Prot  Length:208

    Alignment length:99
                                   102       112       122       132       142       152       162       172       182         
           FADD_HUMAN    93 GEEDLCAAFNVICDNVGKDWRRLARQLKVSDTKIDSIEDRYPRNLTERVRESLRIWKNTEKENATVAHLVGALRSCQMNLVADLVQEVQQARDLQNRSG 191
               SCOP domains d3ezqj_ J: FADD (Mort1)                                                                             SCOP domains
               CATH domains 3ezqJ00 J:93-191 Death Domain, Fas                                                                  CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhh....hhhhhhhhh..hhhhhhhhhhhh..hhhhhhhhhhhhhhhhh....hhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------W-------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----DEATH_DOMAIN  PDB: J:97-181 UniProt: 97-181                                          ---------- PROSITE
           Transcript 1 (1) 1.1 ----------------------------------------------------------------------------------------------- Transcript 1 (1)
           Transcript 1 (2) ---Exon 1.2  PDB: J:96-191 UniProt: 96-208 [INCOMPLETE]                                             Transcript 1 (2)
                 3ezq J  93 GEEDLCAAFNVICDNVGKDWRRLARQLKVSDTKIDSIEDRYPRNLTERVRESLRIWKNTEKENATVAHLVGALRSCQMNLVADLVQEVQQARDLQNRSG 191
                                   102       112       122       132       142       152       162       172       182         

Chain K from PDB  Type:PROTEIN  Length:115
 aligned with TNR6_HUMAN | P25445 from UniProtKB/Swiss-Prot  Length:335

    Alignment length:115
                                                                                                                                          335  
                                   232       242       252       262       272       282       292       302       312       322       332  |  
           TNR6_HUMAN   223 NLSDVDLSKYITTIAGVMTLSQVKGFVRKNGVNEAKIDEIKNDNVQDTAEQKVQLLRNWHQLHGKKEAYDTLIKDLKKANLCTLAEKIQTIILKDITSDSENSNFRNEIQSLV--   -
               SCOP domains d3ezqk_ K: automated matches                                                                                        SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhh..hhhhhhhhhhhh..hhhhhhhhhhhh..hhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhh.. Sec.struct. author
             SAPs(SNPs) (1) ---------C--------K-------LP--D-D-D-RG-S-K-----I-G-----F--------------------N-----I----S--------------------------- SAPs(SNPs) (1)
             SAPs(SNPs) (2) ------------------P--------Q--S------V---------K-K----------------------------------------------------------------- SAPs(SNPs) (2)
             SAPs(SNPs) (3) -------------------------------------Y----------------------------------------------------------------------------- SAPs(SNPs) (3)
                    PROSITE -------DEATH_DOMAIN  PDB: K:230-314 UniProt: 230-314                                        ----------------------- PROSITE
           Transcript 2 (1) 2.10--------------------------------------------------------------------------------------------------------------- Transcript 2 (1)
           Transcript 2 (2) ---Exon 2.11h  PDB: K:226-335 UniProt: 226-335                                                                   -- Transcript 2 (2)
                 3ezq K 223 NLSDVDLSKYITTIAGVMTLSQVKGFVRKNGVNEAKIDEIKNDNVQDTAEQKVQLLRNWHQLHGKKEAYDTLIKDLKKANLCTLAEKIQTIILKDITSDSENSNFRNEIQSLVLE 337
                                   232       242       252       262       272       282       292       302       312       322       332     

Chain L from PDB  Type:PROTEIN  Length:99
 aligned with FADD_HUMAN | Q13158 from UniProtKB/Swiss-Prot  Length:208

    Alignment length:99
                                   102       112       122       132       142       152       162       172       182         
           FADD_HUMAN    93 GEEDLCAAFNVICDNVGKDWRRLARQLKVSDTKIDSIEDRYPRNLTERVRESLRIWKNTEKENATVAHLVGALRSCQMNLVADLVQEVQQARDLQNRSG 191
               SCOP domains d3ezql_ L: FADD (Mort1)                                                                             SCOP domains
               CATH domains 3ezqL00 L:93-191 Death Domain, Fas                                                                  CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhh....hhhhhhhhh..hhhhhhhhhhhh..hhhhhhhhhhhhhhhhh....hhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------W-------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----DEATH_DOMAIN  PDB: L:97-181 UniProt: 97-181                                          ---------- PROSITE
           Transcript 1 (1) 1.1 ----------------------------------------------------------------------------------------------- Transcript 1 (1)
           Transcript 1 (2) ---Exon 1.2  PDB: L:96-191 UniProt: 96-208 [INCOMPLETE]                                             Transcript 1 (2)
                 3ezq L  93 GEEDLCAAFNVICDNVGKDWRRLARQLKVSDTKIDSIEDRYPRNLTERVRESLRIWKNTEKENATVAHLVGALRSCQMNLVADLVQEVQQARDLQNRSG 191
                                   102       112       122       132       142       152       162       172       182         

Chain M from PDB  Type:PROTEIN  Length:115
 aligned with TNR6_HUMAN | P25445 from UniProtKB/Swiss-Prot  Length:335

    Alignment length:115
                                                                                                                                          335  
                                   232       242       252       262       272       282       292       302       312       322       332  |  
           TNR6_HUMAN   223 NLSDVDLSKYITTIAGVMTLSQVKGFVRKNGVNEAKIDEIKNDNVQDTAEQKVQLLRNWHQLHGKKEAYDTLIKDLKKANLCTLAEKIQTIILKDITSDSENSNFRNEIQSLV--   -
               SCOP domains d3ezqm_ M: automated matches                                                                                        SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhh..hhhhhhhhhhhh..hhhhhhhhhhhh..hhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhh.. Sec.struct. author
             SAPs(SNPs) (1) ---------C--------K-------LP--D-D-D-RG-S-K-----I-G-----F--------------------N-----I----S--------------------------- SAPs(SNPs) (1)
             SAPs(SNPs) (2) ------------------P--------Q--S------V---------K-K----------------------------------------------------------------- SAPs(SNPs) (2)
             SAPs(SNPs) (3) -------------------------------------Y----------------------------------------------------------------------------- SAPs(SNPs) (3)
                    PROSITE -------DEATH_DOMAIN  PDB: M:230-314 UniProt: 230-314                                        ----------------------- PROSITE
           Transcript 2 (1) 2.10--------------------------------------------------------------------------------------------------------------- Transcript 2 (1)
           Transcript 2 (2) ---Exon 2.11h  PDB: M:226-335 UniProt: 226-335                                                                   -- Transcript 2 (2)
                 3ezq M 223 NLSDVDLSKYITTIAGVMTLSQVKGFVRKNGVNEAKIDEIKNDNVQDTAEQKVQLLRNWHQLHGKKEAYDTLIKDLKKANLCTLAEKIQTIILKDITSDSENSNFRNEIQSLVLE 337
                                   232       242       252       262       272       282       292       302       312       322       332     

Chain N from PDB  Type:PROTEIN  Length:99
 aligned with FADD_HUMAN | Q13158 from UniProtKB/Swiss-Prot  Length:208

    Alignment length:99
                                   102       112       122       132       142       152       162       172       182         
           FADD_HUMAN    93 GEEDLCAAFNVICDNVGKDWRRLARQLKVSDTKIDSIEDRYPRNLTERVRESLRIWKNTEKENATVAHLVGALRSCQMNLVADLVQEVQQARDLQNRSG 191
               SCOP domains d3ezqn_ N: FADD (Mort1)                                                                             SCOP domains
               CATH domains 3ezqN00 N:93-191 Death Domain, Fas                                                                  CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhh....hhhhhhhhh..hhhhhhhhhhhh..hhhhhhhhhhhhhhhhh....hhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------W-------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----DEATH_DOMAIN  PDB: N:97-181 UniProt: 97-181                                          ---------- PROSITE
           Transcript 1 (1) 1.1 ----------------------------------------------------------------------------------------------- Transcript 1 (1)
           Transcript 1 (2) ---Exon 1.2  PDB: N:96-191 UniProt: 96-208 [INCOMPLETE]                                             Transcript 1 (2)
                 3ezq N  93 GEEDLCAAFNVICDNVGKDWRRLARQLKVSDTKIDSIEDRYPRNLTERVRESLRIWKNTEKENATVAHLVGALRSCQMNLVADLVQEVQQARDLQNRSG 191
                                   102       112       122       132       142       152       162       172       182         

Chain O from PDB  Type:PROTEIN  Length:115
 aligned with TNR6_HUMAN | P25445 from UniProtKB/Swiss-Prot  Length:335

    Alignment length:115
                                                                                                                                          335  
                                   232       242       252       262       272       282       292       302       312       322       332  |  
           TNR6_HUMAN   223 NLSDVDLSKYITTIAGVMTLSQVKGFVRKNGVNEAKIDEIKNDNVQDTAEQKVQLLRNWHQLHGKKEAYDTLIKDLKKANLCTLAEKIQTIILKDITSDSENSNFRNEIQSLV--   -
               SCOP domains d3ezqo_ O: automated matches                                                                                        SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhh.hhhhhhhhhhhh..hhhhhhhhhhhh..hhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhh.. Sec.struct. author
             SAPs(SNPs) (1) ---------C--------K-------LP--D-D-D-RG-S-K-----I-G-----F--------------------N-----I----S--------------------------- SAPs(SNPs) (1)
             SAPs(SNPs) (2) ------------------P--------Q--S------V---------K-K----------------------------------------------------------------- SAPs(SNPs) (2)
             SAPs(SNPs) (3) -------------------------------------Y----------------------------------------------------------------------------- SAPs(SNPs) (3)
                    PROSITE -------DEATH_DOMAIN  PDB: O:230-314 UniProt: 230-314                                        ----------------------- PROSITE
           Transcript 2 (1) 2.10--------------------------------------------------------------------------------------------------------------- Transcript 2 (1)
           Transcript 2 (2) ---Exon 2.11h  PDB: O:226-335 UniProt: 226-335                                                                   -- Transcript 2 (2)
                 3ezq O 223 NLSDVDLSKYITTIAGVMTLSQVKGFVRKNGVNEAKIDEIKNDNVQDTAEQKVQLLRNWHQLHGKKEAYDTLIKDLKKANLCTLAEKIQTIILKDITSDSENSNFRNEIQSLVLE 337
                                   232       242       252       262       272       282       292       302       312       322       332     

Chain P from PDB  Type:PROTEIN  Length:99
 aligned with FADD_HUMAN | Q13158 from UniProtKB/Swiss-Prot  Length:208

    Alignment length:99
                                   102       112       122       132       142       152       162       172       182         
           FADD_HUMAN    93 GEEDLCAAFNVICDNVGKDWRRLARQLKVSDTKIDSIEDRYPRNLTERVRESLRIWKNTEKENATVAHLVGALRSCQMNLVADLVQEVQQARDLQNRSG 191
               SCOP domains d3ezqp_ P: FADD (Mort1)                                                                             SCOP domains
               CATH domains 3ezqP00 P:93-191 Death Domain, Fas                                                                  CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhh....hhhhhhhhh..hhhhhhhhhhhh..hhhhhhhhhhhhhhhhh....hhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------W-------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----DEATH_DOMAIN  PDB: P:97-181 UniProt: 97-181                                          ---------- PROSITE
           Transcript 1 (1) 1.1 ----------------------------------------------------------------------------------------------- Transcript 1 (1)
           Transcript 1 (2) ---Exon 1.2  PDB: P:96-191 UniProt: 96-208 [INCOMPLETE]                                             Transcript 1 (2)
                 3ezq P  93 GEEDLCAAFNVICDNVGKDWRRLARQLKVSDTKIDSIEDRYPRNLTERVRESLRIWKNTEKENATVAHLVGALRSCQMNLVADLVQEVQQARDLQNRSG 191
                                   102       112       122       132       142       152       162       172       182         

   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (2, 16)

Asymmetric Unit

(-) CATH Domains  (1, 8)

Asymmetric Unit
1a3ezqB00B:93-191
1b3ezqD00D:93-191
1c3ezqF00F:93-191
1d3ezqH00H:93-191
1e3ezqJ00J:93-191
1f3ezqL00L:93-191
1g3ezqN00N:93-191
1h3ezqP00P:93-191

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 3EZQ)

(-) Gene Ontology  (149, 178)

Asymmetric Unit(hide GO term definitions)
Chain A,C,E,G,I,K,M,O   (TNR6_HUMAN | P25445)
molecular function
    GO:0042802    identical protein binding    Interacting selectively and non-covalently with an identical protein or proteins.
    GO:0019900    kinase binding    Interacting selectively and non-covalently with a kinase, any enzyme that catalyzes the transfer of a phosphate group.
    GO:0002020    protease binding    Interacting selectively and non-covalently with any protease or peptidase.
    GO:0005515    protein binding    Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
    GO:0032403    protein complex binding    Interacting selectively and non-covalently with any protein complex (a complex of two or more proteins that may include other nonprotein molecules).
    GO:0004872    receptor activity    Combining with an extracellular or intracellular messenger to initiate a change in cell activity.
    GO:0004871    signal transducer activity    Conveys a signal across a cell to trigger a change in cell function or state. A signal is a physical entity or change in state that is used to transfer information in order to trigger a response.
    GO:0004888    transmembrane signaling receptor activity    Combining with an extracellular or intracellular signal and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity or state as part of signal transduction.
    GO:0005031    tumor necrosis factor-activated receptor activity    Combining with tumor necrosis factor, a proinflammatory cytokine produced by monocytes and macrophages, to initiate a change in cell function.
biological process
    GO:0019724    B cell mediated immunity    Any process involved with the carrying out of an immune response by a B cell, through, for instance, the production of antibodies or cytokines, or antigen presentation to T cells.
    GO:0043029    T cell homeostasis    The process of regulating the proliferation and elimination of T cells such that the total number of T cells within a whole or part of an organism is stable over time in the absence of an outside stimulus.
    GO:0006919    activation of cysteine-type endopeptidase activity involved in apoptotic process    Any process that initiates the activity of the inactive enzyme cysteine-type endopeptidase in the context of an apoptotic process.
    GO:0097296    activation of cysteine-type endopeptidase activity involved in apoptotic signaling pathway    Any process that initiates the activity of an inactive cysteine-type endopeptidase involved in the apoptotic signaling pathway.
    GO:0006924    activation-induced cell death of T cells    A T cell apoptotic process that occurs towards the end of the expansion phase following the initial activation of mature T cells by antigen and is triggered by T cell receptor stimulation and signals transmitted via various surface-expressed members of the TNF receptor family such as Fas ligand, Fas, and TNF and the p55 and p75 TNF receptors.
    GO:0007568    aging    A developmental process that is a deterioration and loss of function over time. Aging includes loss of functions such as resistance to disease, homeostasis, and fertility, as well as wear and tear. Aging includes cellular senescence, but is more inclusive. May precede death and may succeed developmental maturation (GO:0021700).
    GO:0006915    apoptotic process    A programmed cell death process which begins when a cell receives an internal (e.g. DNA damage) or external signal (e.g. an extracellular death ligand), and proceeds through a series of biochemical events (signaling pathway phase) which trigger an execution phase. The execution phase is the last step of an apoptotic process, and is typically characterized by rounding-up of the cell, retraction of pseudopodes, reduction of cellular volume (pyknosis), chromatin condensation, nuclear fragmentation (karyorrhexis), plasma membrane blebbing and fragmentation of the cell into apoptotic bodies. When the execution phase is completed, the cell has died.
    GO:0097190    apoptotic signaling pathway    A series of molecular signals which triggers the apoptotic death of a cell. The pathway starts with reception of a signal, and ends when the execution phase of apoptosis is triggered.
    GO:0007420    brain development    The process whose specific outcome is the progression of the brain over time, from its formation to the mature structure. Brain development begins with patterning events in the neural tube and ends with the mature structure that is the center of thought and emotion. The brain is responsible for the coordination and control of bodily activities and the interpretation of information from the senses (sight, hearing, smell, etc.).
    GO:0071279    cellular response to cobalt ion    Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cobalt ion stimulus.
    GO:0071345    cellular response to cytokine stimulus    Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cytokine stimulus.
    GO:0071391    cellular response to estrogen stimulus    Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of stimulus by an estrogen, C18 steroid hormones that can stimulate the development of female sexual characteristics.
    GO:0071333    cellular response to glucose stimulus    Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a glucose stimulus.
    GO:0070301    cellular response to hydrogen peroxide    Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a hydrogen peroxide (H2O2) stimulus.
    GO:0071464    cellular response to hydrostatic pressure    Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a hydrostatic pressure stimulus. Hydrostatic pressure is the force acting on an object in a system where the fluid is at rest (as opposed to moving). The weight of the fluid above the object creates pressure on it.
    GO:0071455    cellular response to hyperoxia    Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating increased oxygen tension.
    GO:0071456    cellular response to hypoxia    Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level.
    GO:0071347    cellular response to interleukin-1    Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interleukin-1 stimulus.
    GO:0071285    cellular response to lithium ion    Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a lithium (Li+) ion stimulus.
    GO:0071260    cellular response to mechanical stimulus    Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a mechanical stimulus.
    GO:0071407    cellular response to organic cyclic compound    Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an organic cyclic compound stimulus.
    GO:0071234    cellular response to phenylalanine    Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a phenylalanine stimulus.
    GO:0071356    cellular response to tumor necrosis factor    Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a tumor necrosis factor stimulus.
    GO:0043009    chordate embryonic development    The process whose specific outcome is the progression of the embryo over time, from zygote formation through a stage including a notochord and neural tube until birth or egg hatching.
    GO:0007623    circadian rhythm    Any biological process in an organism that recurs with a regularity of approximately 24 hours.
    GO:0031104    dendrite regeneration    The regrowth of dendrites in response to their loss or damage.
    GO:0097191    extrinsic apoptotic signaling pathway    A series of molecular signals in which a signal is conveyed from the cell surface to trigger the apoptotic death of a cell. The pathway starts with either a ligand binding to a cell surface receptor, or a ligand being withdrawn from a cell surface receptor (e.g. in the case of signaling by dependence receptors), and ends when the execution phase of apoptosis is triggered.
    GO:0097192    extrinsic apoptotic signaling pathway in absence of ligand    A series of molecular signals in which a signal is conveyed from the cell surface to trigger the apoptotic death of a cell. The pathway starts with withdrawal of a ligand from a cell surface receptor, and ends when the execution phase of apoptosis is triggered.
    GO:0008625    extrinsic apoptotic signaling pathway via death domain receptors    A series of molecular signals in which a signal is conveyed from the cell surface to trigger the apoptotic death of a cell. The pathway starts with a ligand binding to a death domain receptor on the cell surface, and ends when the execution phase of apoptosis is triggered.
    GO:0010467    gene expression    The process in which a gene's sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA or circRNA (for protein-coding genes) and the translation of that mRNA or circRNA into protein. Protein maturation is included when required to form an active form of a product from an inactive precursor form.
    GO:0097284    hepatocyte apoptotic process    Any apoptotic process in a hepatocyte, the main structural component of the liver.
    GO:0006955    immune response    Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat.
    GO:0002377    immunoglobulin production    The appearance of immunoglobulin due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.
    GO:0006925    inflammatory cell apoptotic process    Any apoptotic process in an inflammatory cell, any cell participating in the inflammatory response to a foreign substance e.g. neutrophil, macrophage.
    GO:0006954    inflammatory response    The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages.
    GO:0097421    liver regeneration    The regrowth of lost or destroyed liver.
    GO:0060135    maternal process involved in female pregnancy    A reproductive process occurring in the mother that allows an embryo or fetus to develop within it.
    GO:0097049    motor neuron apoptotic process    Any apoptotic process in a motor neuron, an efferent neuron that passes from the central nervous system or a ganglion toward or to a muscle and conducts an impulse that causes movement.
    GO:0097527    necroptotic signaling pathway    A series of molecular signals which triggers the necroptotic death of a cell. The pathway starts with reception of a signal, is characterized by activation of receptor-interacting serine/threonine-protein kinase 1 and/or 3 (RIPK1/3, also called RIP1/3), and ends when the execution phase of necroptosis is triggered.
    GO:0050869    negative regulation of B cell activation    Any process that stops, prevents, or reduces the frequency, rate or extent of B cell activation.
    GO:0043066    negative regulation of apoptotic process    Any process that stops, prevents, or reduces the frequency, rate or extent of cell death by apoptotic process.
    GO:1902042    negative regulation of extrinsic apoptotic signaling pathway via death domain receptors    Any process that stops, prevents or reduces the frequency, rate or extent of extrinsic apoptotic signaling pathway via death domain receptors.
    GO:0045060    negative thymic T cell selection    The process of elimination of immature T cells in the thymus which react strongly with self-antigens.
    GO:0051402    neuron apoptotic process    Any apoptotic process in a neuron, the basic cellular unit of nervous tissue. Each neuron consists of a body, an axon, and dendrites. Their purpose is to receive, conduct, and transmit impulses in the nervous system.
    GO:0006927    obsolete transformed cell apoptotic process    OBSOLETE. Any apoptotic process in a transformed cell, a cell that has undergone changes manifested by escape from control mechanisms, increased growth potential, alterations in the cell surface, karyotypic abnormalities, morphological and biochemical deviations from the norm.
    GO:0001552    ovarian follicle atresia    A periodic process in which immature ovarian follicles degenerate and are subsequently re-absorbed.
    GO:0042698    ovulation cycle    The type of sexual cycle seen in females, often with physiologic changes in the endometrium that recur at regular intervals during the reproductive years.
    GO:0043410    positive regulation of MAPK cascade    Any process that activates or increases the frequency, rate or extent of signal transduction mediated by the MAPK cascade.
    GO:0043065    positive regulation of apoptotic process    Any process that activates or increases the frequency, rate or extent of cell death by apoptotic process.
    GO:0010942    positive regulation of cell death    Any process that increases the rate or frequency of cell death. Cell death is the specific activation or halting of processes within a cell so that its vital functions markedly cease, rather than simply deteriorating gradually over time, which culminates in cell death.
    GO:0043280    positive regulation of cysteine-type endopeptidase activity involved in apoptotic process    Any process that activates or increases the activity of a cysteine-type endopeptidase involved in the apoptotic process.
    GO:2001238    positive regulation of extrinsic apoptotic signaling pathway    Any process that activates or increases the frequency, rate or extent of extrinsic apoptotic signaling pathway.
    GO:2001241    positive regulation of extrinsic apoptotic signaling pathway in absence of ligand    Any process that activates or increases the frequency, rate or extent of extrinsic apoptotic signaling pathway in absence of ligand.
    GO:0070230    positive regulation of lymphocyte apoptotic process    Any process that activates or increases the frequency, rate or extent of lymphocyte death by apoptotic process.
    GO:0032464    positive regulation of protein homooligomerization    Any process that activates or increases the frequency, rate or extent of protein homooligomerization.
    GO:0006461    protein complex assembly    The aggregation, arrangement and bonding together of a set of components to form a protein complex.
    GO:0051260    protein homooligomerization    The process of creating protein oligomers, compounds composed of a small number, usually between three and ten, of identical component monomers. Oligomers may be formed by the polymerization of a number of monomers or the depolymerization of a large protein polymer.
    GO:0042981    regulation of apoptotic process    Any process that modulates the occurrence or rate of cell death by apoptotic process.
    GO:0042127    regulation of cell proliferation    Any process that modulates the frequency, rate or extent of cell proliferation.
    GO:0043281    regulation of cysteine-type endopeptidase activity involved in apoptotic process    Any process that modulates the activity of a cysteine-type endopeptidase involved in apoptosis.
    GO:1902041    regulation of extrinsic apoptotic signaling pathway via death domain receptors    Any process that modulates the frequency, rate or extent of extrinsic apoptotic signaling pathway via death domain receptors.
    GO:0010468    regulation of gene expression    Any process that modulates the frequency, rate or extent of gene expression. Gene expression is the process in which a gene's coding sequence is converted into a mature gene product or products (proteins or RNA). This includes the production of an RNA transcript as well as any processing to produce a mature RNA product or an mRNA or circRNA (for protein-coding genes) and the translation of that mRNA or circRNA into protein. Protein maturation is included when required to form an active form of a product from an inactive precursor form.
    GO:0045619    regulation of lymphocyte differentiation    Any process that modulates the frequency, rate or extent of lymphocyte differentiation.
    GO:0045637    regulation of myeloid cell differentiation    Any process that modulates the frequency, rate or extent of myeloid cell differentiation.
    GO:0003014    renal system process    A organ system process carried out by any of the organs or tissues of the renal system. The renal system maintains fluid balance, and contributes to electrolyte balance, acid/base balance, and disposal of nitrogenous waste products. In humans, the renal system comprises a pair of kidneys, a pair of ureters, urinary bladder, urethra, sphincter muscle and associated blood vessels; in other species, the renal system may comprise related structures (e.g., nephrocytes and malpighian tubules in Drosophila).
    GO:0046898    response to cycloheximide    Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cycloheximide stimulus. Cycloheximide (actidione) is an antibiotic produced by some Streptomyces species which interferes with protein synthesis in eukaryotes.
    GO:0034097    response to cytokine    Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cytokine stimulus.
    GO:0042493    response to drug    Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a drug stimulus. A drug is a substance used in the diagnosis, treatment or prevention of a disease.
    GO:0043627    response to estrogen    Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of stimulus by an estrogen, C18 steroid hormones that can stimulate the development of female sexual characteristics.
    GO:1902617    response to fluoride    Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a fluoride stimulus.
    GO:0051384    response to glucocorticoid    Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a glucocorticoid stimulus. Glucocorticoids are hormonal C21 corticosteroids synthesized from cholesterol with the ability to bind with the cortisol receptor and trigger similar effects. Glucocorticoids act primarily on carbohydrate and protein metabolism, and have anti-inflammatory effects.
    GO:0070848    response to growth factor    Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a growth factor stimulus.
    GO:0001666    response to hypoxia    Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level.
    GO:0010035    response to inorganic substance    Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an inorganic substance stimulus.
    GO:0032496    response to lipopolysaccharide    Any process that results in a change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a lipopolysaccharide stimulus; lipopolysaccharide is a major component of the cell wall of gram-negative bacteria.
    GO:0043434    response to peptide hormone    Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a peptide hormone stimulus. A peptide hormone is any of a class of peptides that are secreted into the blood stream and have endocrine functions in living animals.
    GO:0009636    response to toxic substance    Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a toxic stimulus.
    GO:0007165    signal transduction    The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell.
    GO:0007283    spermatogenesis    The process of formation of spermatozoa, including spermatocytogenesis and spermiogenesis.
    GO:0048536    spleen development    The process whose specific outcome is the progression of the spleen over time, from its formation to the mature structure. The spleen is a large vascular lymphatic organ composed of white and red pulp, involved both in hemopoietic and immune system functions.
    GO:0021537    telencephalon development    The process whose specific outcome is the progression of the telencephalon over time, from its formation to the mature structure. The telencephalon is the paired anteriolateral division of the prosencephalon plus the lamina terminalis from which the olfactory lobes, cerebral cortex, and subcortical nuclei are derived.
    GO:0033209    tumor necrosis factor-mediated signaling pathway    A series of molecular signals initiated by the binding of a tumor necrosis factor to a receptor on the surface of a cell, and ending with regulation of a downstream cellular process, e.g. transcription.
cellular component
    GO:0031265    CD95 death-inducing signaling complex    A protein complex formed upon binding of Fas/CD95/APO-1 to its ligand. The complex includes FADD/Mort1, procaspase-8/10 and c-FLIP in addition to the ligand-bound receptor.
    GO:0097440    apical dendrite    A dendrite that emerges near the apical pole of a neuron. In bipolar neurons, apical dendrites are located on the opposite side of the soma from the axon.
    GO:0016324    apical plasma membrane    The region of the plasma membrane located at the apical end of the cell.
    GO:0009986    cell surface    The external part of the cell wall and/or plasma membrane.
    GO:0005737    cytoplasm    All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
    GO:0005829    cytosol    The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
    GO:0031264    death-inducing signaling complex    A protein complex formed by the association of signaling proteins with a death receptor upon ligand binding. The complex includes procaspases and death domain-containing proteins in addition to the ligand-bound receptor, and may control the activation of caspases 8 and 10.
    GO:0009897    external side of plasma membrane    The leaflet of the plasma membrane that faces away from the cytoplasm and any proteins embedded or anchored in it or attached to its surface.
    GO:0070062    extracellular exosome    A vesicle that is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane. Extracellular exosomes, also simply called exosomes, have a diameter of about 40-100 nm.
    GO:0005576    extracellular region    The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite.
    GO:0005615    extracellular space    That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid.
    GO:0016021    integral component of membrane    The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
    GO:0005887    integral component of plasma membrane    The component of the plasma membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
    GO:0016020    membrane    A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
    GO:0045121    membrane raft    Any of the small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes. Small rafts can sometimes be stabilized to form larger platforms through protein-protein and protein-lipid interactions.
    GO:0043005    neuron projection    A prolongation or process extending from a nerve cell, e.g. an axon or dendrite.
    GO:0043025    neuronal cell body    The portion of a neuron that includes the nucleus, but excludes cell projections such as axons and dendrites.
    GO:0005634    nucleus    A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
    GO:0048471    perinuclear region of cytoplasm    Cytoplasm situated near, or occurring around, the nucleus.
    GO:0005886    plasma membrane    The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.
    GO:0042383    sarcolemma    The outer membrane of a muscle cell, consisting of the plasma membrane, a covering basement membrane (about 100 nm thick and sometimes common to more than one fiber), and the associated loose network of collagen fibers.
    GO:0030141    secretory granule    A small subcellular vesicle, surrounded by a membrane, that is formed from the Golgi apparatus and contains a highly concentrated protein destined for secretion. Secretory granules move towards the periphery of the cell and upon stimulation, their membranes fuse with the cell membrane, and their protein load is exteriorized. Processing of the contained protein may take place in secretory granules.

Chain B,D,F,H,J,L,N,P   (FADD_HUMAN | Q13158)
molecular function
    GO:0089720    caspase binding    Interacting selectively and non-covalently with a caspase family protein.
    GO:0035877    death effector domain binding    Interacting selectively and non-covalently with a DED domain (death effector domain) of a protein, a homotypic protein interaction module composed of a bundle of six alpha-helices that is related in structure to the death domain (DD).
    GO:0005123    death receptor binding    Interacting selectively and non-covalently with any member of the death receptor (DR) family. The DR family falls within the tumor necrosis factor receptor superfamily and is characterized by a cytoplasmic region of ~80 residues termed the death domain (DD).
    GO:0042802    identical protein binding    Interacting selectively and non-covalently with an identical protein or proteins.
    GO:0002020    protease binding    Interacting selectively and non-covalently with any protease or peptidase.
    GO:0005515    protein binding    Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
    GO:0032403    protein complex binding    Interacting selectively and non-covalently with any protein complex (a complex of two or more proteins that may include other nonprotein molecules).
    GO:0005164    tumor necrosis factor receptor binding    Interacting selectively and non-covalently with the tumor necrosis factor receptor.
    GO:0032813    tumor necrosis factor receptor superfamily binding    Interacting selectively and non-covalently with any member of the tumor necrosis factor receptor superfamily.
biological process
    GO:0033077    T cell differentiation in thymus    The process in which a precursor cell type acquires the specialized features of a T cell via a differentiation pathway dependent upon transit through the thymus.
    GO:0043029    T cell homeostasis    The process of regulating the proliferation and elimination of T cells such that the total number of T cells within a whole or part of an organism is stable over time in the absence of an outside stimulus.
    GO:0036462    TRAIL-activated apoptotic signaling pathway    An extrinsic apoptotic signaling pathway initiated by the binding of the ligand TRAIL (tumor necrosis factor-related apoptosis-inducing ligand) to a death receptor on the cell surface.
    GO:0035666    TRIF-dependent toll-like receptor signaling pathway    Any series of molecular signals generated as a consequence of binding to a toll-like receptor where the TRIF adaptor mediates transduction of the signal. Toll-like receptors directly bind pattern motifs from a variety of microbial sources to initiate innate immune response.
    GO:0097202    activation of cysteine-type endopeptidase activity    Any process that initiates the activity of the inactive enzyme cysteine-type endopeptidase.
    GO:0006919    activation of cysteine-type endopeptidase activity involved in apoptotic process    Any process that initiates the activity of the inactive enzyme cysteine-type endopeptidase in the context of an apoptotic process.
    GO:0097296    activation of cysteine-type endopeptidase activity involved in apoptotic signaling pathway    Any process that initiates the activity of an inactive cysteine-type endopeptidase involved in the apoptotic signaling pathway.
    GO:0006915    apoptotic process    A programmed cell death process which begins when a cell receives an internal (e.g. DNA damage) or external signal (e.g. an extracellular death ligand), and proceeds through a series of biochemical events (signaling pathway phase) which trigger an execution phase. The execution phase is the last step of an apoptotic process, and is typically characterized by rounding-up of the cell, retraction of pseudopodes, reduction of cellular volume (pyknosis), chromatin condensation, nuclear fragmentation (karyorrhexis), plasma membrane blebbing and fragmentation of the cell into apoptotic bodies. When the execution phase is completed, the cell has died.
    GO:0097190    apoptotic signaling pathway    A series of molecular signals which triggers the apoptotic death of a cell. The pathway starts with reception of a signal, and ends when the execution phase of apoptosis is triggered.
    GO:0007166    cell surface receptor signaling pathway    A series of molecular signals initiated by activation of a receptor on the surface of a cell. The pathway begins with binding of an extracellular ligand to a cell surface receptor, or for receptors that signal in the absence of a ligand, by ligand-withdrawal or the activity of a constitutively active receptor. The pathway ends with regulation of a downstream cellular process, e.g. transcription.
    GO:0071260    cellular response to mechanical stimulus    Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a mechanical stimulus.
    GO:0071550    death-inducing signaling complex assembly    A process of protein complex assembly in which the arrangement and bonding together of the set of components that form the protein complex is mediated by a death domain (DD) interaction, as part of the extrinsic apoptotic signaling pathway.
    GO:0051607    defense response to virus    Reactions triggered in response to the presence of a virus that act to protect the cell or organism.
    GO:0097191    extrinsic apoptotic signaling pathway    A series of molecular signals in which a signal is conveyed from the cell surface to trigger the apoptotic death of a cell. The pathway starts with either a ligand binding to a cell surface receptor, or a ligand being withdrawn from a cell surface receptor (e.g. in the case of signaling by dependence receptors), and ends when the execution phase of apoptosis is triggered.
    GO:0097192    extrinsic apoptotic signaling pathway in absence of ligand    A series of molecular signals in which a signal is conveyed from the cell surface to trigger the apoptotic death of a cell. The pathway starts with withdrawal of a ligand from a cell surface receptor, and ends when the execution phase of apoptosis is triggered.
    GO:0008625    extrinsic apoptotic signaling pathway via death domain receptors    A series of molecular signals in which a signal is conveyed from the cell surface to trigger the apoptotic death of a cell. The pathway starts with a ligand binding to a death domain receptor on the cell surface, and ends when the execution phase of apoptosis is triggered.
    GO:0002376    immune system process    Any process involved in the development or functioning of the immune system, an organismal system for calibrated responses to potential internal or invasive threats.
    GO:0045087    innate immune response    Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens.
    GO:0048535    lymph node development    The process whose specific outcome is the progression of lymph nodes over time, from their formation to the mature structure. A lymph node is a round, oval, or bean shaped structure localized in clusters along the lymphatic vessels, with a distinct internal structure including specialized vasculature and B- and T-zones for the activation of lymphocytes.
    GO:0097049    motor neuron apoptotic process    Any apoptotic process in a motor neuron, an efferent neuron that passes from the central nervous system or a ganglion toward or to a muscle and conducts an impulse that causes movement.
    GO:0097527    necroptotic signaling pathway    A series of molecular signals which triggers the necroptotic death of a cell. The pathway starts with reception of a signal, is characterized by activation of receptor-interacting serine/threonine-protein kinase 1 and/or 3 (RIPK1/3, also called RIP1/3), and ends when the execution phase of necroptosis is triggered.
    GO:0070236    negative regulation of activation-induced cell death of T cells    Any process that stops, prevents, or reduces the frequency, rate or extent of activation-induced cell death of T cells.
    GO:1902042    negative regulation of extrinsic apoptotic signaling pathway via death domain receptors    Any process that stops, prevents or reduces the frequency, rate or extent of extrinsic apoptotic signaling pathway via death domain receptors.
    GO:0060546    negative regulation of necroptotic process    Any process that decreases the rate, frequency or extent of a necroptotic process, a necrotic cell death process that results from the activation of endogenous cellular processes, such as signaling involving death domain receptors or Toll-like receptors.
    GO:2000454    positive regulation of CD8-positive, alpha-beta cytotoxic T cell extravasation    Any process that activates or increases the frequency, rate or extent of CD8-positive, alpha-beta cytotoxic T cell extravasation.
    GO:0043123    positive regulation of I-kappaB kinase/NF-kappaB signaling    Any process that activates or increases the frequency, rate or extent of I-kappaB kinase/NF-kappaB signaling.
    GO:0001916    positive regulation of T cell mediated cytotoxicity    Any process that activates or increases the frequency, rate or extent of T cell mediated cytotoxicity.
    GO:0042104    positive regulation of activated T cell proliferation    Any process that activates or increases the rate or extent of activated T cell proliferation.
    GO:0002821    positive regulation of adaptive immune response    Any process that activates or increases the frequency, rate, or extent of an adaptive immune response.
    GO:0043065    positive regulation of apoptotic process    Any process that activates or increases the frequency, rate or extent of cell death by apoptotic process.
    GO:2001238    positive regulation of extrinsic apoptotic signaling pathway    Any process that activates or increases the frequency, rate or extent of extrinsic apoptotic signaling pathway.
    GO:1902043    positive regulation of extrinsic apoptotic signaling pathway via death domain receptors    Any process that activates or increases the frequency, rate or extent of extrinsic apoptotic signaling pathway via death domain receptors.
    GO:0032729    positive regulation of interferon-gamma production    Any process that activates or increases the frequency, rate, or extent of interferon-gamma production. Interferon-gamma is also known as type II interferon.
    GO:0032757    positive regulation of interleukin-8 production    Any process that activates or increases the frequency, rate, or extent of interleukin-8 production.
    GO:0045651    positive regulation of macrophage differentiation    Any process that activates or increases the frequency, rate or extent of macrophage differentiation.
    GO:0045862    positive regulation of proteolysis    Any process that activates or increases the frequency, rate or extent of the hydrolysis of a peptide bond or bonds within a protein.
    GO:0045944    positive regulation of transcription from RNA polymerase II promoter    Any process that activates or increases the frequency, rate or extent of transcription from an RNA polymerase II promoter.
    GO:0032760    positive regulation of tumor necrosis factor production    Any process that activates or increases the frequency, rate, or extent of tumor necrosis factor production.
    GO:0060340    positive regulation of type I interferon-mediated signaling pathway    Any process that increases the rate, frequency or extent of a type I interferon-mediated signaling pathway. A type I interferon-mediated signaling pathway is the series of molecular events generated as a consequence of a type I interferon binding to a cell surface receptor.
    GO:0051291    protein heterooligomerization    The process of creating protein oligomers, compounds composed of a small number, usually between three and ten, of component monomers that are not all identical. Oligomers may be formed by the polymerization of a number of monomers or the depolymerization of a large protein polymer.
    GO:0042981    regulation of apoptotic process    Any process that modulates the occurrence or rate of cell death by apoptotic process.
    GO:1902041    regulation of extrinsic apoptotic signaling pathway via death domain receptors    Any process that modulates the frequency, rate or extent of extrinsic apoptotic signaling pathway via death domain receptors.
    GO:0007165    signal transduction    The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell.
    GO:0048536    spleen development    The process whose specific outcome is the progression of the spleen over time, from its formation to the mature structure. The spleen is a large vascular lymphatic organ composed of white and red pulp, involved both in hemopoietic and immune system functions.
    GO:0048538    thymus development    The process whose specific outcome is the progression of the thymus over time, from its formation to the mature structure. The thymus is a symmetric bi-lobed organ involved primarily in the differentiation of immature to mature T cells, with unique vascular, nervous, epithelial, and lymphoid cell components.
    GO:0016032    viral process    A multi-organism process in which a virus is a participant. The other participant is the host. Includes infection of a host cell, replication of the viral genome, and assembly of progeny virus particles. In some cases the viral genetic material may integrate into the host genome and only subsequently, under particular circumstances, 'complete' its life cycle.
cellular component
    GO:0031265    CD95 death-inducing signaling complex    A protein complex formed upon binding of Fas/CD95/APO-1 to its ligand. The complex includes FADD/Mort1, procaspase-8/10 and c-FLIP in addition to the ligand-bound receptor.
    GO:0044297    cell body    The portion of a cell bearing surface projections such as axons, dendrites, cilia, or flagella that includes the nucleus, but excludes all cell projections.
    GO:0005737    cytoplasm    All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
    GO:0005829    cytosol    The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
    GO:0031264    death-inducing signaling complex    A protein complex formed by the association of signaling proteins with a death receptor upon ligand binding. The complex includes procaspases and death domain-containing proteins in addition to the ligand-bound receptor, and may control the activation of caspases 8 and 10.
    GO:0045121    membrane raft    Any of the small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes. Small rafts can sometimes be stabilized to form larger platforms through protein-protein and protein-lipid interactions.
    GO:0043005    neuron projection    A prolongation or process extending from a nerve cell, e.g. an axon or dendrite.
    GO:0005886    plasma membrane    The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.
    GO:0043234    protein complex    A stable macromolecular complex composed (only) of two or more polypeptide subunits along with any covalently attached molecules (such as lipid anchors or oligosaccharide) or non-protein prosthetic groups (such as nucleotides or metal ions). Prosthetic group in this context refers to a tightly bound cofactor. The component polypeptide subunits may be identical.
    GO:0097342    ripoptosome    A protein complex whose core components are the receptor-interacting serine/threonine-protein kinases RIPK1 and RIPK3 (also called RIP1 and RIP3). Formation of the ripoptosome can induce an extrinsic apoptotic signaling pathway or a necroptotic signaling pathway. The composition of this protein complex may depend on several factors including nature of the signal, cell type and more.

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        FADD_HUMAN | Q131581a1w 1a1z 1e3y 1e41 2gf5 3oq9
        TNR6_HUMAN | P254451bzi 1ddf 2na7 3ewt 3thm 3tje

(-) Related Entries Specified in the PDB File

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