Chain A from PDB Type:PROTEIN Length:418
aligned with A5JGM8_CLOBO | A5JGM8 from UniProtKB/TrEMBL Length:1285
Alignment length:427
867 877 887 897 907 917 927 937 947 957 967 977 987 997 1007 1017 1027 1037 1047 1057 1067 1077 1087 1097 1107 1117 1127 1137 1147 1157 1167 1177 1187 1197 1207 1217 1227 1237 1247 1257 1267 1277
A5JGM8_CLOBO 858 NEYFNSINDSKILSLQNKKNTLMDTSGYNAEVRVEGNVQLNPIFPFDFKLGSSGDDRGKVIVTQNENIVYNAMYESFSISFWIRINKWVSNLPGYTIIDSVKNNSGWSIGIISNFLVFTLKQNENSEQDINFSYDISKNAAGYNKWFFVTITTNMMGNMMIYINGKLIDTIKVKELTGINFSKTITFQMNKIPNTGLITSDSDNINMWIRDFYIFAKELDDKDINILFNSLQYTNVVKDYWGNDLRYDKEYYMINVNYMNRYMSKKGNGIVFNTRKNNNDFNEGYKIIIKRIRGNTNDTRVRGENVLYFNTTIDNKQYSLGMYKPSRNLGTDLVPLGALDQPMDEIRKYGSFIIQPCNTFDYYASQLFLSSNATTNRLGILSIGSYSFKLGDDYWFNHEYLIPVIKIEHYASLLESTSTHWVFVPAS 1284
SCOP domains d3azwa1 A:858-1076 automated matches d3azwa2 A:1077-1284 automated matches SCOP domains
CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author hhhhhhhhhheeeeeeee..eeee......eeeee...ee.......eeee.......eeeee.hhhhhhhhh..eeeeeeeeeee........eeeeeee....eeeeeee..eeeeeee.....eeeeeee.............eeeeeeee...eeeeee..eeeeeee...........eeeeeeee...---------..eeeeeeeeee....hhhhhhhhhhhh..................eeeeee.hhh.eeeeee..eeeeee............eeeeeee............eeeeeee....eeeeee..........eeeeeee..hhhhhhhhh.eeeeeee....eeeeeeee......eeeeeeeeeeee.........eeeeeeeeee....hhhhhhhh.eeeee.. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3azw A 858 NEYFNSINDSKILSLQNKKNTLMDTSGYNAEVRVEGNVQLNPIFPFDFKLGSSGDDRGKVIVTQNENIVYNAMYESFSISFWIRINKWVSNLPGYTIIDSVKNNSGWSIGIISNFLVFTLKQNENSEQDINFSYDISKNAAGYNKWFFVTITTNMMGNMMIYINGKLIDTIKVKELTGINFSKTITFQMNKIPN---------NINMWIRDFYIFAKELDDKDINILFNSLQYTNVVKDYWGNDLRYDKEYYMINVNYMNRYMSKKGNGIVFNTRKNNNDFNEGYKIIIKRIRGNTNDTRVRGENVLYFNTTIDNKQYSLGMYKPSRNLGTDLVPLGALDQPMDEIRKYGSFIIQPCNTFDYYASQLFLSSNATTNRLGILSIGSYSFKLGDDYWFNHEYLIPVIKIEHYASLLESTSTHWVFVPAS 1284
867 877 887 897 907 917 927 937 947 957 967 977 987 997 1007 1017 1027 1037 1047 | - | 1067 1077 1087 1097 1107 1117 1127 1137 1147 1157 1167 1177 1187 1197 1207 1217 1227 1237 1247 1257 1267 1277
1051 1061
Chain A from PDB Type:PROTEIN Length:418
aligned with Q9LBR1_CLOBO | Q9LBR1 from UniProtKB/TrEMBL Length:1285
Alignment length:427
867 877 887 897 907 917 927 937 947 957 967 977 987 997 1007 1017 1027 1037 1047 1057 1067 1077 1087 1097 1107 1117 1127 1137 1147 1157 1167 1177 1187 1197 1207 1217 1227 1237 1247 1257 1267 1277
Q9LBR1_CLOBO 858 NEYFNSINDSKILSLQNKKNTLMDTSGYNAEVRVEGNVQLNPIFPFDFKLGSSGDDRGKVIVTQNENIVYNAMYESFSISFWIRINKWVSNLPGYTIIDSVKNNSGWSIGIISNFLVFTLKQNENSEQDINFSYDISKNAAGYNKWFFVTITTNMMGNMMIYINGKLIDTIKVKELTGINFSKTITFQMNKIPNTGLITSDSDNINMWIRDFYIFAKELDDKDINILFNSLQYTNVVKDYWGNDLRYDKEYYMINVNYMNRYMSKKGNGIVFNTRKNNNDFNEGYKIIIKRIRGNTNDTRVRGENVLYFNTTIDNKQYSLGMYKPSRNLGTDLVPLGALDQPMDEIRKYGSFIIQPCNTFDYYASQLFLSSNATTNRLGILSIGSYSFKLGDDYWFNHEYLIPVIKIEHYASLLESTSTHWVFVPAS 1284
SCOP domains d3azwa1 A:858-1076 automated matches d3azwa2 A:1077-1284 automated matches SCOP domains
CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author hhhhhhhhhheeeeeeee..eeee......eeeee...ee.......eeee.......eeeee.hhhhhhhhh..eeeeeeeeeee........eeeeeee....eeeeeee..eeeeeee.....eeeeeee.............eeeeeeee...eeeeee..eeeeeee...........eeeeeeee...---------..eeeeeeeeee....hhhhhhhhhhhh..................eeeeee.hhh.eeeeee..eeeeee............eeeeeee............eeeeeee....eeeeee..........eeeeeee..hhhhhhhhh.eeeeeee....eeeeeeee......eeeeeeeeeeee.........eeeeeeeeee....hhhhhhhh.eeeee.. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3azw A 858 NEYFNSINDSKILSLQNKKNTLMDTSGYNAEVRVEGNVQLNPIFPFDFKLGSSGDDRGKVIVTQNENIVYNAMYESFSISFWIRINKWVSNLPGYTIIDSVKNNSGWSIGIISNFLVFTLKQNENSEQDINFSYDISKNAAGYNKWFFVTITTNMMGNMMIYINGKLIDTIKVKELTGINFSKTITFQMNKIPN---------NINMWIRDFYIFAKELDDKDINILFNSLQYTNVVKDYWGNDLRYDKEYYMINVNYMNRYMSKKGNGIVFNTRKNNNDFNEGYKIIIKRIRGNTNDTRVRGENVLYFNTTIDNKQYSLGMYKPSRNLGTDLVPLGALDQPMDEIRKYGSFIIQPCNTFDYYASQLFLSSNATTNRLGILSIGSYSFKLGDDYWFNHEYLIPVIKIEHYASLLESTSTHWVFVPAS 1284
867 877 887 897 907 917 927 937 947 957 967 977 987 997 1007 1017 1027 1037 1047 | - | 1067 1077 1087 1097 1107 1117 1127 1137 1147 1157 1167 1177 1187 1197 1207 1217 1227 1237 1247 1257 1267 1277
1051 1061
Chain B from PDB Type:PROTEIN Length:418
aligned with A5JGM8_CLOBO | A5JGM8 from UniProtKB/TrEMBL Length:1285
Alignment length:427
867 877 887 897 907 917 927 937 947 957 967 977 987 997 1007 1017 1027 1037 1047 1057 1067 1077 1087 1097 1107 1117 1127 1137 1147 1157 1167 1177 1187 1197 1207 1217 1227 1237 1247 1257 1267 1277
A5JGM8_CLOBO 858 NEYFNSINDSKILSLQNKKNTLMDTSGYNAEVRVEGNVQLNPIFPFDFKLGSSGDDRGKVIVTQNENIVYNAMYESFSISFWIRINKWVSNLPGYTIIDSVKNNSGWSIGIISNFLVFTLKQNENSEQDINFSYDISKNAAGYNKWFFVTITTNMMGNMMIYINGKLIDTIKVKELTGINFSKTITFQMNKIPNTGLITSDSDNINMWIRDFYIFAKELDDKDINILFNSLQYTNVVKDYWGNDLRYDKEYYMINVNYMNRYMSKKGNGIVFNTRKNNNDFNEGYKIIIKRIRGNTNDTRVRGENVLYFNTTIDNKQYSLGMYKPSRNLGTDLVPLGALDQPMDEIRKYGSFIIQPCNTFDYYASQLFLSSNATTNRLGILSIGSYSFKLGDDYWFNHEYLIPVIKIEHYASLLESTSTHWVFVPAS 1284
SCOP domains d3azwb1 B:858-1076 automated matches d3azwb2 B:1077-1284 automated matches SCOP domains
CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author hhhhhhhhhheeeeeeee..eeee......eeeee...ee.......eeee.......eeeee.hhhhhhhhhhh.eeeeeeeee.........eeeeeee....eeeeeee..eeeeeeeee..eeeeeeee.............eeeeeee.....eeeee..eeeeee............eeeeeeee...---------..eeeeeeeeee....hhhhhhhhhhhh..................eeeeee.hhh.eeeeee..eeeeee............eeeeeee............eeeeeee....eeeeee..........eeeeeee..hhhhhhhhh.eeeeeee....eeeeeeee......eeeeeeeeeeee.........eeeeeeeee.....hhhhhhhh.eeeee.. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3azw B 858 NEYFNSINDSKILSLQNKKNTLMDTSGYNAEVRVEGNVQLNPIFPFDFKLGSSGDDRGKVIVTQNENIVYNAMYESFSISFWIRINKWVSNLPGYTIIDSVKNNSGWSIGIISNFLVFTLKQNENSEQDINFSYDISKNAAGYNKWFFVTITTNMMGNMMIYINGKLIDTIKVKELTGINFSKTITFQMNKIPN---------NINMWIRDFYIFAKELDDKDINILFNSLQYTNVVKDYWGNDLRYDKEYYMINVNYMNRYMSKKGNGIVFNTRKNNNDFNEGYKIIIKRIRGNTNDTRVRGENVLYFNTTIDNKQYSLGMYKPSRNLGTDLVPLGALDQPMDEIRKYGSFIIQPCNTFDYYASQLFLSSNATTNRLGILSIGSYSFKLGDDYWFNHEYLIPVIKIEHYASLLESTSTHWVFVPAS 1284
867 877 887 897 907 917 927 937 947 957 967 977 987 997 1007 1017 1027 1037 1047 | - | 1067 1077 1087 1097 1107 1117 1127 1137 1147 1157 1167 1177 1187 1197 1207 1217 1227 1237 1247 1257 1267 1277
1051 1061
Chain B from PDB Type:PROTEIN Length:418
aligned with Q9LBR1_CLOBO | Q9LBR1 from UniProtKB/TrEMBL Length:1285
Alignment length:427
867 877 887 897 907 917 927 937 947 957 967 977 987 997 1007 1017 1027 1037 1047 1057 1067 1077 1087 1097 1107 1117 1127 1137 1147 1157 1167 1177 1187 1197 1207 1217 1227 1237 1247 1257 1267 1277
Q9LBR1_CLOBO 858 NEYFNSINDSKILSLQNKKNTLMDTSGYNAEVRVEGNVQLNPIFPFDFKLGSSGDDRGKVIVTQNENIVYNAMYESFSISFWIRINKWVSNLPGYTIIDSVKNNSGWSIGIISNFLVFTLKQNENSEQDINFSYDISKNAAGYNKWFFVTITTNMMGNMMIYINGKLIDTIKVKELTGINFSKTITFQMNKIPNTGLITSDSDNINMWIRDFYIFAKELDDKDINILFNSLQYTNVVKDYWGNDLRYDKEYYMINVNYMNRYMSKKGNGIVFNTRKNNNDFNEGYKIIIKRIRGNTNDTRVRGENVLYFNTTIDNKQYSLGMYKPSRNLGTDLVPLGALDQPMDEIRKYGSFIIQPCNTFDYYASQLFLSSNATTNRLGILSIGSYSFKLGDDYWFNHEYLIPVIKIEHYASLLESTSTHWVFVPAS 1284
SCOP domains d3azwb1 B:858-1076 automated matches d3azwb2 B:1077-1284 automated matches SCOP domains
CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author hhhhhhhhhheeeeeeee..eeee......eeeee...ee.......eeee.......eeeee.hhhhhhhhhhh.eeeeeeeee.........eeeeeee....eeeeeee..eeeeeeeee..eeeeeeee.............eeeeeee.....eeeee..eeeeee............eeeeeeee...---------..eeeeeeeeee....hhhhhhhhhhhh..................eeeeee.hhh.eeeeee..eeeeee............eeeeeee............eeeeeee....eeeeee..........eeeeeee..hhhhhhhhh.eeeeeee....eeeeeeee......eeeeeeeeeeee.........eeeeeeeee.....hhhhhhhh.eeeee.. Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
3azw B 858 NEYFNSINDSKILSLQNKKNTLMDTSGYNAEVRVEGNVQLNPIFPFDFKLGSSGDDRGKVIVTQNENIVYNAMYESFSISFWIRINKWVSNLPGYTIIDSVKNNSGWSIGIISNFLVFTLKQNENSEQDINFSYDISKNAAGYNKWFFVTITTNMMGNMMIYINGKLIDTIKVKELTGINFSKTITFQMNKIPN---------NINMWIRDFYIFAKELDDKDINILFNSLQYTNVVKDYWGNDLRYDKEYYMINVNYMNRYMSKKGNGIVFNTRKNNNDFNEGYKIIIKRIRGNTNDTRVRGENVLYFNTTIDNKQYSLGMYKPSRNLGTDLVPLGALDQPMDEIRKYGSFIIQPCNTFDYYASQLFLSSNATTNRLGILSIGSYSFKLGDDYWFNHEYLIPVIKIEHYASLLESTSTHWVFVPAS 1284
867 877 887 897 907 917 927 937 947 957 967 977 987 997 1007 1017 1027 1037 1047 | - | 1067 1077 1087 1097 1107 1117 1127 1137 1147 1157 1167 1177 1187 1197 1207 1217 1227 1237 1247 1257 1267 1277
1051 1061
Legend: |
|
→ Mismatch |
(orange background) |
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- |
→ Gap |
(green background, '-', border residues have a numbering label) |
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|
→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |