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(-) Description

Title :  CRYSTAL STRUCTURE OF ANCESTRAL CONGERIN CON-ANC
 
Authors :  A. Konno, A. Kitagawa, M. Watanabe, T. Ogawa, T. Shirai
Date :  29 Jun 10  (Deposition) - 18 May 11  (Release) - 11 Feb 15  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.50
Chains :  Asym. Unit :  A
Biol. Unit 1:  A  (2x)
Biol. Unit 2:  A  (1x)
Keywords :  Ancestral Protein, Galectin, Lectin, Sugar Binding Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  A. Konno, A. Kitagawa, M. Watanabe, T. Ogawa, T. Shirai
Tracing Protein Evolution Through Ancestral Structures Of Fish Galectin
Structure V. 19 711 2011
PubMed-ID: 21565705  |  Reference-DOI: 10.1016/J.STR.2011.02.014

(-) Compounds

Molecule 1 - ANCESTRAL CONGERIN CON-ANC
    Chains: A
    Engineered: YES
    Other Details: SYNTHETIC SOURCE DESCRIPTION. THIS SEQUENCE IS AN ANCESTRAL GENE OF GALECTIN, WHICH HAS BEEN RECONSTRUCTED FROM PHYLOGENETIC INFORMATION. THE HOST IS ESCHERICHIA COLI (JM109), THE PLASMID IS PTV-CON-ANC.
    Synthetic: YES

 Structural Features

(-) Chains, Units

  1
Asymmetric Unit : A
Biological Unit 1 (2x): A
Biological Unit 2 (1x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 2)

Asymmetric Unit (2, 2)
No.NameCountTypeFull Name
1BGC1Ligand/IonBETA-D-GLUCOSE
2GAL1Ligand/IonBETA-D-GALACTOSE
Biological Unit 1 (2, 4)
No.NameCountTypeFull Name
1BGC2Ligand/IonBETA-D-GLUCOSE
2GAL2Ligand/IonBETA-D-GALACTOSE
Biological Unit 2 (2, 2)
No.NameCountTypeFull Name
1BGC1Ligand/IonBETA-D-GLUCOSE
2GAL1Ligand/IonBETA-D-GALACTOSE

(-) Sites  (2, 2)

Asymmetric Unit (2, 2)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREARG A:46 , TYR A:49 , GLU A:69 , GAL A:133 , HOH A:148 , HOH A:243BINDING SITE FOR RESIDUE BGC A 134
2AC2SOFTWAREARG A:27 , HIS A:42 , ASP A:44 , ARG A:46 , TYR A:49 , ASN A:59 , TRP A:66 , GLU A:69 , BGC A:134 , HOH A:138 , HOH A:156 , HOH A:193BINDING SITE FOR RESIDUE GAL A 133

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 3AJZ)

(-) Cis Peptide Bonds  (0, 0)

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 Sequence-Structure Mapping

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(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:132
                                                                                                                                                                    
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..eeeeeeee....eeeeeee.....eeeeeee.....eeeeeeeeeee..eeeeeeeeeee..ee...eee.........eeeeeeee...eeeee.....eeeee......eeeeeeeee.eeeeeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 3ajz A   1 GVEVKNITFKLGMYLTVGGVVNSNANRFSINVGESTDSIALHIDHRFSYGADQNTIVLNSMVDDGWQQEQRSKNFPFTAGEHFQITITFDIDTFYIQLPDGHKVEFPNRHGDEAFNFIYLAGDARLTFVRLE 132
                                    10        20        30        40        50        60        70        80        90       100       110       120       130
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 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 3AJZ)

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(-) Pfam Domains  (0, 0)

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(-) Gene Ontology  (0, 0)

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  3ajz
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

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(-) Related Entries Specified in the PDB File

1c1f EXTANT OFFSPRING
1c1l EXTANT OFFSPRING
1is3 EXTANT OFFSPRING
1is4 EXTANT OFFSPRING
1is5 EXTANT OFFSPRING
1is6 EXTANT OFFSPRING
3ajy
3ak0