2ZRT - JenaLib

Asymmetric Unit (Jmol Viewer)

Asym. Unit - sites (Jmol Viewer)

Biological Unit 1 (Jmol Viewer)

Biol. Unit 1 - sites (Jmol Viewer)

Biological Unit 2 (Jmol Viewer)

Biological Unit 3 (Jmol Viewer)

Biological Unit 4 (Jmol Viewer)

Title :   CRYSTAL STRUCTURE OF ZN2+-BOUND FORM OF DES3-23ALG-2

Authors :   H. Suzuki, M. Kawasaki, T. Kakiuchi, H. Shibata, S. Wakatsuki, M. Maki

Date :   01 Sep 08 (Deposition) - 04 Nov 08 (Release) - 09 Jun 09 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   3.30

Chains :   Asym. Unit : A,B,C,D,E,F,G,H
Biol. Unit 1: A,B  (1x)
Biol. Unit 2: C,D  (1x)
Biol. Unit 3: E,F  (1x)
Biol. Unit 4: G,H  (1x)

Keywords :   Penta-Ef-Hand Protein, Calcium-Binding Protein, Apoptosis, Calcium, Endoplasmic Reticulum, Membrane, Nucleus, Polymorphism (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   H. Suzuki, M. Kawasaki, T. Kakiuchi, H. Shibata, S. Wakatsuki, M. Maki
Crystallization And X-Ray Diffraction Analysis Of N-Terminally Truncated Human Alg-2
Acta Crystallogr. , Sect. F V. 64 974 2008
PubMed-ID: 18997320 | Reference-DOI: 10.1107/S1744309108030297
(for further references see the PDB file header)

Molecule 1 - PROGRAMMED CELL DEATH PROTEIN 6
	Chains	:	A, B, C, D, E, F, G, H
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI
	Expression System Plasmid	:	PET3D
	Expression System Strain	:	BL21(DE3)PLYSS
	Expression System Taxid	:	562
	Expression System Vector Type	:	PLASMID
	Fragment	:	UNP RESIDUES 24-191
	Gene	:	PDCD6, ALG2
	Organism Common	:	HUMAN
	Organism Scientific	:	HOMO SAPIENS
	Organism Taxid	:	9606
	Synonym	:	APOPTOSIS-LINKED GENE 2 PROTEIN, CALCIUM-BINDING PROTEIN ALG-2

		1	2	3	4	5	6	7	8
Asymmetric Unit	:	A	B	C	D	E	F	G	H
Biological Unit 1 (1x)	:	A	B
Biological Unit 2 (1x)	:			C	D
Biological Unit 3 (1x)	:					E	F
Biological Unit 4 (1x)	:							G	H

Summary Information (see also Sequences/Alignments below)

Asymmetric Unit (1, 37)

No.	Name	Count	Type	Full Name
1	ZN	37	Ligand/Ion	ZINC ION

Biological Unit 1 (0, 0)

No.	Name	Count	Type	Full Name
1	ZN	-1	Ligand/Ion	ZINC ION

Biological Unit 2 (0, 0)

No.	Name	Count	Type	Full Name
1	ZN	-1	Ligand/Ion	ZINC ION

Biological Unit 3 (0, 0)

No.	Name	Count	Type	Full Name
1	ZN	-1	Ligand/Ion	ZINC ION

Biological Unit 4 (0, 0)

No.	Name	Count	Type	Full Name
1	ZN	-1	Ligand/Ion	ZINC ION

Asymmetric Unit (37, 37)

No.	Name	Evidence	Residues	Description
01	AC1	SOFTWARE	ASP A:103 , ASP A:105 , MET A:109 , ASP A:111 , GLU A:114	BINDING SITE FOR RESIDUE ZN A 990
02	AC2	SOFTWARE	ASP A:169 , ASP A:171 , ASP A:173 , TRP A:175	BINDING SITE FOR RESIDUE ZN A 991
03	AC3	SOFTWARE	ASP A:171 , ASP A:173	BINDING SITE FOR RESIDUE ZN A 992
04	AC4	SOFTWARE	ASP B:36 , ASP B:38 , SER B:40 , GLU B:47	BINDING SITE FOR RESIDUE ZN B 990
05	AC5	SOFTWARE	ASP B:103 , ASP B:105 , SER B:107 , MET B:109 , ILE B:110 , GLU B:114	BINDING SITE FOR RESIDUE ZN B 991
06	AC6	SOFTWARE	ASP B:169 , ASP B:171 , ASP B:173 , TRP B:175	BINDING SITE FOR RESIDUE ZN B 992
07	AC7	SOFTWARE	ASP B:105 , SER B:107 , ASP B:111 , GLN B:145 , ARG B:167	BINDING SITE FOR RESIDUE ZN B 993
08	AC8	SOFTWARE	GLN B:25 , ASP B:171 , ASP B:173	BINDING SITE FOR RESIDUE ZN B 994
09	AC9	SOFTWARE	ASP C:36 , ASP C:38 , SER C:40 , GLU C:47	BINDING SITE FOR RESIDUE ZN C 990
10	BC1	SOFTWARE	ASP C:103 , ASP C:105 , SER C:107 , MET C:109 , ASP C:111 , GLU C:114	BINDING SITE FOR RESIDUE ZN C 991
11	BC2	SOFTWARE	ASP C:169 , ASP C:171 , ASP C:173 , TRP C:175	BINDING SITE FOR RESIDUE ZN C 992
12	BC3	SOFTWARE	ASP C:105 , ASP C:111 , GLN C:145	BINDING SITE FOR RESIDUE ZN C 993
13	BC4	SOFTWARE	ASP C:171 , ASP C:173 , ARG E:74	BINDING SITE FOR RESIDUE ZN C 994
14	BC5	SOFTWARE	ASP D:36 , ASP D:38 , SER D:40 , GLU D:47	BINDING SITE FOR RESIDUE ZN D 990
15	BC6	SOFTWARE	ASP D:103 , ASP D:105 , SER D:107 , MET D:109 , GLU D:114	BINDING SITE FOR RESIDUE ZN D 991
16	BC7	SOFTWARE	ASP D:169 , ASP D:173 , TRP D:175	BINDING SITE FOR RESIDUE ZN D 992
17	BC8	SOFTWARE	ASP D:105 , SER D:107 , MET D:109 , ASP D:111 , GLU D:114	BINDING SITE FOR RESIDUE ZN D 993
18	BC9	SOFTWARE	ASP D:171 , ASP D:173	BINDING SITE FOR RESIDUE ZN D 994
19	CC1	SOFTWARE	ASP E:36 , ASP E:38 , SER E:40 , GLU E:47	BINDING SITE FOR RESIDUE ZN E 990
20	CC2	SOFTWARE	ASP E:103 , ASP E:105 , SER E:107 , MET E:109 , ASP E:111 , GLU E:114	BINDING SITE FOR RESIDUE ZN E 991
21	CC3	SOFTWARE	ASP E:169 , ASP E:171 , GLY E:174 , TRP E:175	BINDING SITE FOR RESIDUE ZN E 992
22	CC4	SOFTWARE	ASP E:105 , SER E:107 , ASP E:111 , GLU E:114	BINDING SITE FOR RESIDUE ZN E 993
23	CC5	SOFTWARE	ASP E:171 , GLY E:174 , TRP E:175	BINDING SITE FOR RESIDUE ZN E 994
24	CC6	SOFTWARE	ASP F:36 , ASP F:38 , SER F:40 , GLU F:47	BINDING SITE FOR RESIDUE ZN F 990
25	CC7	SOFTWARE	ASP F:103 , ASP F:105 , SER F:107 , MET F:109 , GLU F:114	BINDING SITE FOR RESIDUE ZN F 991
26	CC8	SOFTWARE	ASP F:169 , ASP F:171 , ASP F:173 , TRP F:175	BINDING SITE FOR RESIDUE ZN F 992
27	CC9	SOFTWARE	ASP F:105 , ASP F:111 , GLU F:114	BINDING SITE FOR RESIDUE ZN F 993
28	DC1	SOFTWARE	ASP F:171 , ASP F:173	BINDING SITE FOR RESIDUE ZN F 994
29	DC2	SOFTWARE	SER G:40 , SER G:44 , GLU G:47	BINDING SITE FOR RESIDUE ZN G 990
30	DC3	SOFTWARE	ASP G:103 , ASP G:105 , MET G:109 , ASP G:111 , GLU G:114	BINDING SITE FOR RESIDUE ZN G 991
31	DC4	SOFTWARE	ASP G:105 , ASP G:111 , GLU G:114	BINDING SITE FOR RESIDUE ZN G 992
32	DC5	SOFTWARE	ASP G:169 , THR G:170 , ASP G:171 , GLN G:172 , ASP G:173 , GLY G:174	BINDING SITE FOR RESIDUE ZN G 993
33	DC6	SOFTWARE	THR G:170 , ASP G:171 , ASP G:173	BINDING SITE FOR RESIDUE ZN G 994
34	DC7	SOFTWARE	ASP H:169 , ASP H:173 , TRP H:175	BINDING SITE FOR RESIDUE ZN H 990
35	DC8	SOFTWARE	ARG H:136 , ASP H:171	BINDING SITE FOR RESIDUE ZN H 992
36	DC9	SOFTWARE	ASN D:106 , ASN E:106	BINDING SITE FOR RESIDUE ZN D 1
37	EC1	SOFTWARE	ASN B:106 , ASN C:106	BINDING SITE FOR RESIDUE ZN B 2

(no "SS Bond" information available for 2ZRT)

(no "Cis Peptide Bond" information available for 2ZRT)

Asymmetric Unit (2, 16)

								dbSNP	PDB
No.	Source	Variant ID	Variant			UniProt ID	Status	ID	Chain	Variant
1	UniProt	VAR_035459	G	123	C	PDCD6_HUMAN	Unclassified	---	A/B/C/D/E/F/G/H	G	123	C
2	CancerSNP	VAR_PDCD6_HUMAN_CCDS3854_1_01 *	G	123	C	PDCD6_HUMAN	Disease (Breast cancer)	---	A/B/C/D/E/F/G/H	G	123	C
	* ID not provided by source

SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

Biological Unit 1 (2, 4)

								dbSNP	PDB
No.	Source	Variant ID	Variant			UniProt ID	Status	ID	Chain	Variant
1	UniProt	VAR_035459	G	123	C	PDCD6_HUMAN	Unclassified	---	A/B	G	123	C
2	CancerSNP	VAR_PDCD6_HUMAN_CCDS3854_1_01 *	G	123	C	PDCD6_HUMAN	Disease (Breast cancer)	---	A/B	G	123	C
	* ID not provided by source

SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

Biological Unit 2 (2, 4)

								dbSNP	PDB
No.	Source	Variant ID	Variant			UniProt ID	Status	ID	Chain	Variant
1	UniProt	VAR_035459	G	123	C	PDCD6_HUMAN	Unclassified	---	C/D	G	123	C
2	CancerSNP	VAR_PDCD6_HUMAN_CCDS3854_1_01 *	G	123	C	PDCD6_HUMAN	Disease (Breast cancer)	---	C/D	G	123	C
	* ID not provided by source

SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

Biological Unit 3 (2, 4)

								dbSNP	PDB
No.	Source	Variant ID	Variant			UniProt ID	Status	ID	Chain	Variant
1	UniProt	VAR_035459	G	123	C	PDCD6_HUMAN	Unclassified	---	E/F	G	123	C
2	CancerSNP	VAR_PDCD6_HUMAN_CCDS3854_1_01 *	G	123	C	PDCD6_HUMAN	Disease (Breast cancer)	---	E/F	G	123	C
	* ID not provided by source

SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

Biological Unit 4 (2, 4)

								dbSNP	PDB
No.	Source	Variant ID	Variant			UniProt ID	Status	ID	Chain	Variant
1	UniProt	VAR_035459	G	123	C	PDCD6_HUMAN	Unclassified	---	G/H	G	123	C
2	CancerSNP	VAR_PDCD6_HUMAN_CCDS3854_1_01 *	G	123	C	PDCD6_HUMAN	Disease (Breast cancer)	---	G/H	G	123	C
	* ID not provided by source

SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

Asymmetric Unit (2, 32)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	EF_HAND_2	PS50222	EF-hand calcium-binding domain profile.	PDCD6_HUMAN	23-58 90-125 156-191	16	- A:90-125 B:90-125 C:90-125 D:90-125 E:90-125 F:90-125 G:90-125 H:90-125 A:156-189 B:156-188 C:156-188 D:156-189 E:156-189 F:156-189 G:156-188 H:156-188
2	EF_HAND_1	PS00018	EF-hand calcium-binding domain.	PDCD6_HUMAN	36-48 103-115	16	A:36-48 B:36-48 C:36-48 D:36-48 E:36-48 F:36-48 G:36-48 H:36-48 A:103-115 B:103-115 C:103-115 D:103-115 E:103-115 F:103-115 G:103-115 H:103-115

Biological Unit 1 (2, 8)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	EF_HAND_2	PS50222	EF-hand calcium-binding domain profile.	PDCD6_HUMAN	23-58 90-125 156-191	4	- A:90-125 B:90-125 - - - - - - A:156-189 B:156-188 - - - - - -
2	EF_HAND_1	PS00018	EF-hand calcium-binding domain.	PDCD6_HUMAN	36-48 103-115	4	A:36-48 B:36-48 - - - - - - A:103-115 B:103-115 - - - - - -

Biological Unit 2 (2, 8)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	EF_HAND_2	PS50222	EF-hand calcium-binding domain profile.	PDCD6_HUMAN	23-58 90-125 156-191	4	- - - C:90-125 D:90-125 - - - - - - C:156-188 D:156-189 - - - -
2	EF_HAND_1	PS00018	EF-hand calcium-binding domain.	PDCD6_HUMAN	36-48 103-115	4	- - C:36-48 D:36-48 - - - - - - C:103-115 D:103-115 - - - -

Biological Unit 3 (2, 8)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	EF_HAND_2	PS50222	EF-hand calcium-binding domain profile.	PDCD6_HUMAN	23-58 90-125 156-191	4	- - - - - E:90-125 F:90-125 - - - - - - E:156-189 F:156-189 - -
2	EF_HAND_1	PS00018	EF-hand calcium-binding domain.	PDCD6_HUMAN	36-48 103-115	4	- - - - E:36-48 F:36-48 - - - - - - E:103-115 F:103-115 - -

Biological Unit 4 (2, 8)

	PROSITE			UniProtKB		PDB
No.	ID	AC	Description	ID	Location	Count	Location
1	EF_HAND_2	PS50222	EF-hand calcium-binding domain profile.	PDCD6_HUMAN	23-58 90-125 156-191	4	- - - - - - - G:90-125 H:90-125 - - - - - - G:156-188 H:156-188
2	EF_HAND_1	PS00018	EF-hand calcium-binding domain.	PDCD6_HUMAN	36-48 103-115	4	- - - - - - G:36-48 H:36-48 - - - - - - G:103-115 H:103-115

(no "Exon" information available for 2ZRT)

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:165
 aligned with PDCD6_HUMAN | O75340 from UniProtKB/Swiss-Prot  Length:191

    Alignment length:165
                                    34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184     
          PDCD6_HUMAN    25 QSFLWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWKYITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQGCIVLQRLTDIFRRYDTDQDGWIQVSYEQYLSMVFS 189
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....................................hhhhhhhhhh...............hhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhh........................hhhhhhhhhhhhhhhhhhhhhhh.....ee..hhhhhhhhhh. Sec.struct. author
             SAPs(SNPs) (1) --------------------------------------------------------------------------------------------------C------------------------------------------------------------------ SAPs(SNPs) (1)
             SAPs(SNPs) (2) --------------------------------------------------------------------------------------------------C------------------------------------------------------------------ SAPs(SNPs) (2)
                PROSITE (1) EF_HAND_2  PDB: - UniProt: 23-58  -------------------------------EF_HAND_2  PDB: A:90-125            ------------------------------EF_HAND_2  PDB: A:156-189          PROSITE (1)
                PROSITE (2) -----------EF_HAND_1    ------------------------------------------------------EF_HAND_1    -------------------------------------------------------------------------- PROSITE (2)
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2zrt A  25 QSFLWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWKYITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQGCIVLQRLTDIFRRYDTDQDGWIQVSYEQYLSMVFS 189
                                    34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184

Chain B from PDB  Type:PROTEIN  Length:165
 aligned with PDCD6_HUMAN | O75340 from UniProtKB/Swiss-Prot  Length:191

    Alignment length:165
                                    33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183     
          PDCD6_HUMAN    24 DQSFLWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWKYITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQGCIVLQRLTDIFRRYDTDQDGWIQVSYEQYLSMVF 188
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhh.........hhhhhhh........hhhhhhhhhh..........hhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhh.....hhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhhh........ee...hhhhh. Sec.struct. author
             SAPs(SNPs) (1) ---------------------------------------------------------------------------------------------------C----------------------------------------------------------------- SAPs(SNPs) (1)
             SAPs(SNPs) (2) ---------------------------------------------------------------------------------------------------C----------------------------------------------------------------- SAPs(SNPs) (2)
                PROSITE (1) EF_HAND_2  PDB: - UniProt: 23-58   -------------------------------EF_HAND_2  PDB: B:90-125            ------------------------------EF_HAND_2  PDB: B:156-188         PROSITE (1)
                PROSITE (2) ------------EF_HAND_1    ------------------------------------------------------EF_HAND_1    ------------------------------------------------------------------------- PROSITE (2)
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2zrt B  24 DQSFLWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWKYITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQGCIVLQRLTDIFRRYDTDQDGWIQVSYEQYLSMVF 188
                                    33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183

Chain C from PDB  Type:PROTEIN  Length:164
 aligned with PDCD6_HUMAN | O75340 from UniProtKB/Swiss-Prot  Length:191

    Alignment length:164
                                    34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184    
          PDCD6_HUMAN    25 QSFLWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWKYITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQGCIVLQRLTDIFRRYDTDQDGWIQVSYEQYLSMVF 188
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhh.......eehhhhhh..........hhhhhhhhhhhhh.....eehhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhh.....hhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhhh.....eeeeehhhhhhhhh Sec.struct. author
             SAPs(SNPs) (1) --------------------------------------------------------------------------------------------------C----------------------------------------------------------------- SAPs(SNPs) (1)
             SAPs(SNPs) (2) --------------------------------------------------------------------------------------------------C----------------------------------------------------------------- SAPs(SNPs) (2)
                PROSITE (1) EF_HAND_2  PDB: - UniProt: 23-58  -------------------------------EF_HAND_2  PDB: C:90-125            ------------------------------EF_HAND_2  PDB: C:156-188         PROSITE (1)
                PROSITE (2) -----------EF_HAND_1    ------------------------------------------------------EF_HAND_1    ------------------------------------------------------------------------- PROSITE (2)
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2zrt C  25 QSFLWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWKYITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQGCIVLQRLTDIFRRYDTDQDGWIQVSYEQYLSMVF 188
                                    34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184

Chain D from PDB  Type:PROTEIN  Length:163
 aligned with PDCD6_HUMAN | O75340 from UniProtKB/Swiss-Prot  Length:191

    Alignment length:163
                                    36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186   
          PDCD6_HUMAN    27 FLWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWKYITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQGCIVLQRLTDIFRRYDTDQDGWIQVSYEQYLSMVFS 189
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhh.......hhhhhhhh.........hhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhh........hhhhhhhhhhhhh...hhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhh.......eeeeehhhhhhhhh. Sec.struct. author
             SAPs(SNPs) (1) ------------------------------------------------------------------------------------------------C------------------------------------------------------------------ SAPs(SNPs) (1)
             SAPs(SNPs) (2) ------------------------------------------------------------------------------------------------C------------------------------------------------------------------ SAPs(SNPs) (2)
                PROSITE (1) EF_HAND_2  PDB: - UniProt: 23-58-------------------------------EF_HAND_2  PDB: D:90-125            ------------------------------EF_HAND_2  PDB: D:156-189          PROSITE (1)
                PROSITE (2) ---------EF_HAND_1    ------------------------------------------------------EF_HAND_1    -------------------------------------------------------------------------- PROSITE (2)
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2zrt D  27 FLWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWKYITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQGCIVLQRLTDIFRRYDTDQDGWIQVSYEQYLSMVFS 189
                                    36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186

Chain E from PDB  Type:PROTEIN  Length:166
 aligned with PDCD6_HUMAN | O75340 from UniProtKB/Swiss-Prot  Length:191

    Alignment length:166
                                    33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183      
          PDCD6_HUMAN    24 DQSFLWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWKYITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQGCIVLQRLTDIFRRYDTDQDGWIQVSYEQYLSMVFS 189
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhh.........hhhhhh.........hhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhh.........hhhhhhhhhh........hhhhhhhhhh........hhhhhhhhhhhhhhhhhhhhhhh......eeehhhhhhhhhh. Sec.struct. author
             SAPs(SNPs) (1) ---------------------------------------------------------------------------------------------------C------------------------------------------------------------------ SAPs(SNPs) (1)
             SAPs(SNPs) (2) ---------------------------------------------------------------------------------------------------C------------------------------------------------------------------ SAPs(SNPs) (2)
                PROSITE (1) EF_HAND_2  PDB: - UniProt: 23-58   -------------------------------EF_HAND_2  PDB: E:90-125            ------------------------------EF_HAND_2  PDB: E:156-189          PROSITE (1)
                PROSITE (2) ------------EF_HAND_1    ------------------------------------------------------EF_HAND_1    -------------------------------------------------------------------------- PROSITE (2)
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2zrt E  24 DQSFLWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWKYITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQGCIVLQRLTDIFRRYDTDQDGWIQVSYEQYLSMVFS 189
                                    33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183

Chain F from PDB  Type:PROTEIN  Length:165
 aligned with PDCD6_HUMAN | O75340 from UniProtKB/Swiss-Prot  Length:191

    Alignment length:165
                                    34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184     
          PDCD6_HUMAN    25 QSFLWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWKYITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQGCIVLQRLTDIFRRYDTDQDGWIQVSYEQYLSMVFS 189
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhh......eehhhhhh..........hhhhhhhhhhhhh.....eehhhhhhhhhhhhhhhhhhhhhh........hhhhhhhhhhhhh...hhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhhh......eeehhhhhhhhh.. Sec.struct. author
             SAPs(SNPs) (1) --------------------------------------------------------------------------------------------------C------------------------------------------------------------------ SAPs(SNPs) (1)
             SAPs(SNPs) (2) --------------------------------------------------------------------------------------------------C------------------------------------------------------------------ SAPs(SNPs) (2)
                PROSITE (1) EF_HAND_2  PDB: - UniProt: 23-58  -------------------------------EF_HAND_2  PDB: F:90-125            ------------------------------EF_HAND_2  PDB: F:156-189          PROSITE (1)
                PROSITE (2) -----------EF_HAND_1    ------------------------------------------------------EF_HAND_1    -------------------------------------------------------------------------- PROSITE (2)
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2zrt F  25 QSFLWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWKYITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQGCIVLQRLTDIFRRYDTDQDGWIQVSYEQYLSMVFS 189
                                    34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184

Chain G from PDB  Type:PROTEIN  Length:163
 aligned with PDCD6_HUMAN | O75340 from UniProtKB/Swiss-Prot  Length:191

    Alignment length:163
                                    35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185   
          PDCD6_HUMAN    26 SFLWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWKYITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQGCIVLQRLTDIFRRYDTDQDGWIQVSYEQYLSMVF 188
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..................hhhhhh...........hhhhhhhhhhhh...........hhhhhhhhhhhhhhhhhhh......eehhhhhhhhhhh.........hhhhhhhhh......eehhhhhhhhhhhhhh........................... Sec.struct. author
             SAPs(SNPs) (1) -------------------------------------------------------------------------------------------------C----------------------------------------------------------------- SAPs(SNPs) (1)
             SAPs(SNPs) (2) -------------------------------------------------------------------------------------------------C----------------------------------------------------------------- SAPs(SNPs) (2)
                PROSITE (1) EF_HAND_2  PDB: - UniProt: 23-58 -------------------------------EF_HAND_2  PDB: G:90-125            ------------------------------EF_HAND_2  PDB: G:156-188         PROSITE (1)
                PROSITE (2) ----------EF_HAND_1    ------------------------------------------------------EF_HAND_1    ------------------------------------------------------------------------- PROSITE (2)
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2zrt G  26 SFLWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWKYITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQGCIVLQRLTDIFRRYDTDQDGWIQVSYEQYLSMVF 188
                                    35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185

Chain H from PDB  Type:PROTEIN  Length:163
 aligned with PDCD6_HUMAN | O75340 from UniProtKB/Swiss-Prot  Length:191

    Alignment length:163
                                    35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185   
          PDCD6_HUMAN    26 SFLWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWKYITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQGCIVLQRLTDIFRRYDTDQDGWIQVSYEQYLSMVF 188
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
           Pfam domains (1) -------------EF_hand_6-2zrtH09 H:39-90                           EF_hand_5-2zrtH01 H:91-155                                       --------------------------------- Pfam domains (1)
           Pfam domains (2) -------------EF_hand_6-2zrtH10 H:39-90                           EF_hand_5-2zrtH02 H:91-155                                       --------------------------------- Pfam domains (2)
           Pfam domains (3) -------------EF_hand_6-2zrtH11 H:39-90                           EF_hand_5-2zrtH03 H:91-155                                       --------------------------------- Pfam domains (3)
           Pfam domains (4) -------------EF_hand_6-2zrtH12 H:39-90                           EF_hand_5-2zrtH04 H:91-155                                       --------------------------------- Pfam domains (4)
           Pfam domains (5) -------------EF_hand_6-2zrtH13 H:39-90                           EF_hand_5-2zrtH05 H:91-155                                       --------------------------------- Pfam domains (5)
           Pfam domains (6) -------------EF_hand_6-2zrtH14 H:39-90                           EF_hand_5-2zrtH06 H:91-155                                       --------------------------------- Pfam domains (6)
           Pfam domains (7) -------------EF_hand_6-2zrtH15 H:39-90                           EF_hand_5-2zrtH07 H:91-155                                       --------------------------------- Pfam domains (7)
           Pfam domains (8) -------------EF_hand_6-2zrtH16 H:39-90                           EF_hand_5-2zrtH08 H:91-155                                       --------------------------------- Pfam domains (8)
         Sec.struct. author hhhhhhhhhhh.......hhhhhh............hhhhhhhhhhh........hhhhhhhhhhhhhhhh............ee.hhhhhh.........hhhhhhhhhhhh.......eehhhhhhhhhhhhhhhhhhhhhh................... Sec.struct. author
             SAPs(SNPs) (1) -------------------------------------------------------------------------------------------------C----------------------------------------------------------------- SAPs(SNPs) (1)
             SAPs(SNPs) (2) -------------------------------------------------------------------------------------------------C----------------------------------------------------------------- SAPs(SNPs) (2)
                PROSITE (1) EF_HAND_2  PDB: - UniProt: 23-58 -------------------------------EF_HAND_2  PDB: H:90-125            ------------------------------EF_HAND_2  PDB: H:156-188         PROSITE (1)
                PROSITE (2) ----------EF_HAND_1    ------------------------------------------------------EF_HAND_1    ------------------------------------------------------------------------- PROSITE (2)
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2zrt H  26 SFLWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWKYITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQGCIVLQRLTDIFRRYDTDQDGWIQVSYEQYLSMVF 188
                                    35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

(no "SCOP Domain" information available for 2ZRT)

(no "CATH Domain" information available for 2ZRT)

Asymmetric Unit

Clans(

)

Families(

)

Organisms( (-)

)

Clan: EF_hand (270)

Family: EF_hand_5 (126)

Homo sapiens (Human) (31)

1a	EF_hand_5-2zrtH01	H:91-155
1b	EF_hand_5-2zrtH02	H:91-155
1c	EF_hand_5-2zrtH03	H:91-155
1d	EF_hand_5-2zrtH04	H:91-155
1e	EF_hand_5-2zrtH05	H:91-155
1f	EF_hand_5-2zrtH06	H:91-155
1g	EF_hand_5-2zrtH07	H:91-155
1h	EF_hand_5-2zrtH08	H:91-155

Family: EF_hand_6 (75)

Homo sapiens (Human) (34)

2a	EF_hand_6-2zrtH09	H:39-90
2b	EF_hand_6-2zrtH10	H:39-90
2c	EF_hand_6-2zrtH11	H:39-90
2d	EF_hand_6-2zrtH12	H:39-90
2e	EF_hand_6-2zrtH13	H:39-90
2f	EF_hand_6-2zrtH14	H:39-90
2g	EF_hand_6-2zrtH15	H:39-90
2h	EF_hand_6-2zrtH16	H:39-90

Asymmetric Unit(hide GO term definitions)

Chain A,B,C,D,E,F,G,H (PDCD6_HUMAN | O75340)

molecular function
	GO:0060090	binding, bridging	The binding activity of a molecule that brings together two or more molecules through a selective, non-covalent, often stoichiometric interaction, permitting those molecules to function in a coordinated way.
	GO:0005509	calcium ion binding	Interacting selectively and non-covalently with calcium ions (Ca2+).
	GO:0004198	calcium-dependent cysteine-type endopeptidase activity	Catalysis of the hydrolysis of nonterminal peptide bonds in a polypeptide chain by a mechanism using a cysteine residue at the enzyme active center, and requiring the presence of calcium.
	GO:0048306	calcium-dependent protein binding	Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules), in the presence of calcium.
	GO:0042802	identical protein binding	Interacting selectively and non-covalently with an identical protein or proteins.
	GO:0046872	metal ion binding	Interacting selectively and non-covalently with any metal ion.
	GO:0043495	protein anchor	Interacting selectively and non-covalently with both a protein or protein complex and a membrane, in order to maintain the localization of the protein at a specific membrane location.
	GO:0005515	protein binding	Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
	GO:0046983	protein dimerization activity	The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits.
	GO:0042803	protein homodimerization activity	Interacting selectively and non-covalently with an identical protein to form a homodimer.
biological process
	GO:0006919	activation of cysteine-type endopeptidase activity involved in apoptotic process	Any process that initiates the activity of the inactive enzyme cysteine-type endopeptidase in the context of an apoptotic process.
	GO:0001525	angiogenesis	Blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels.
	GO:0006915	apoptotic process	A programmed cell death process which begins when a cell receives an internal (e.g. DNA damage) or external signal (e.g. an extracellular death ligand), and proceeds through a series of biochemical events (signaling pathway phase) which trigger an execution phase. The execution phase is the last step of an apoptotic process, and is typically characterized by rounding-up of the cell, retraction of pseudopodes, reduction of cellular volume (pyknosis), chromatin condensation, nuclear fragmentation (karyorrhexis), plasma membrane blebbing and fragmentation of the cell into apoptotic bodies. When the execution phase is completed, the cell has died.
	GO:0097190	apoptotic signaling pathway	A series of molecular signals which triggers the apoptotic death of a cell. The pathway starts with reception of a signal, and ends when the execution phase of apoptosis is triggered.
	GO:0034605	cellular response to heat	Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a heat stimulus, a temperature stimulus above the optimal temperature for that organism.
	GO:0006886	intracellular protein transport	The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell.
	GO:0032007	negative regulation of TOR signaling	Any process that stops, prevents, or reduces the frequency, rate or extent of TOR signaling.
	GO:0051898	negative regulation of protein kinase B signaling	Any process that stops, prevents, or reduces the frequency, rate or extent of protein kinase B signaling, a series of reactions mediated by the intracellular serine/threonine kinase protein kinase B.
	GO:0030948	negative regulation of vascular endothelial growth factor receptor signaling pathway	Any process that stops, prevents, or reduces the frequency, rate or extent of vascular endothelial growth factor receptor signaling pathway activity.
	GO:0045766	positive regulation of angiogenesis	Any process that activates or increases angiogenesis.
	GO:0043280	positive regulation of cysteine-type endopeptidase activity involved in apoptotic process	Any process that activates or increases the activity of a cysteine-type endopeptidase involved in the apoptotic process.
	GO:0010595	positive regulation of endothelial cell migration	Any process that increases the rate, frequency, or extent of the orderly movement of an endothelial cell into the extracellular matrix to form an endothelium.
	GO:0001938	positive regulation of endothelial cell proliferation	Any process that activates or increases the rate or extent of endothelial cell proliferation.
	GO:0051592	response to calcium ion	Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a calcium ion stimulus.
	GO:0036324	vascular endothelial growth factor receptor-2 signaling pathway	Any series of molecular signals initiated by the binding of an extracellular ligand to a vascular endothelial growth factor receptor-2 (VEGFR-2) located on the surface of the receiving cell, and ending with regulation of a downstream cellular process, e.g. transcription.
cellular component
	GO:0005737	cytoplasm	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
	GO:0031410	cytoplasmic vesicle	A vesicle found in the cytoplasm of a cell.
	GO:0005783	endoplasmic reticulum	The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached).
	GO:0070971	endoplasmic reticulum exit site	An endoplasmic reticulum part at which COPII-coated vesicles are produced.
	GO:0005789	endoplasmic reticulum membrane	The lipid bilayer surrounding the endoplasmic reticulum.
	GO:0005768	endosome	A vacuole to which materials ingested by endocytosis are delivered.
	GO:0070062	extracellular exosome	A vesicle that is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane. Extracellular exosomes, also simply called exosomes, have a diameter of about 40-100 nm.
	GO:0016020	membrane	A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
	GO:0031965	nuclear membrane	Either of the lipid bilayers that surround the nucleus and form the nuclear envelope; excludes the intermembrane space.
	GO:0005634	nucleus	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.

Asymmetric Unit
	Complete Structure
		Jena3D(integrated viewing of ligand, site, SAP, PROSITE, SCOP information)
		WebMol \| AstexViewer[tm]@PDBe (Java Applets, require no local installation except for Java; loading may be slow)
		STRAP (Java WebStart application, automatic local installation, requires Java; full application with system access!)
		RasMol (require local installation)
		Molscript (VRML) (requires installation of a VRML viewer; select preferred view via VRML and generate a mono or stereo PDF format file)

	Ligands, Modified Residues, Ions
		ZN	[ RasMol \| Jena3D ]	+environment [ RasMol \| Jena3D ]

	Sites
		AC1	[ RasMol ]	+environment [ RasMol ]
		AC2	[ RasMol ]	+environment [ RasMol ]
		AC3	[ RasMol ]	+environment [ RasMol ]
		AC4	[ RasMol ]	+environment [ RasMol ]
		AC5	[ RasMol ]	+environment [ RasMol ]
		AC6	[ RasMol ]	+environment [ RasMol ]
		AC7	[ RasMol ]	+environment [ RasMol ]
		AC8	[ RasMol ]	+environment [ RasMol ]
		AC9	[ RasMol ]	+environment [ RasMol ]
		BC1	[ RasMol ]	+environment [ RasMol ]
		BC2	[ RasMol ]	+environment [ RasMol ]
		BC3	[ RasMol ]	+environment [ RasMol ]
		BC4	[ RasMol ]	+environment [ RasMol ]
		BC5	[ RasMol ]	+environment [ RasMol ]
		BC6	[ RasMol ]	+environment [ RasMol ]
		BC7	[ RasMol ]	+environment [ RasMol ]
		BC8	[ RasMol ]	+environment [ RasMol ]
		BC9	[ RasMol ]	+environment [ RasMol ]
		CC1	[ RasMol ]	+environment [ RasMol ]
		CC2	[ RasMol ]	+environment [ RasMol ]
		CC3	[ RasMol ]	+environment [ RasMol ]
		CC4	[ RasMol ]	+environment [ RasMol ]
		CC5	[ RasMol ]	+environment [ RasMol ]
		CC6	[ RasMol ]	+environment [ RasMol ]
		CC7	[ RasMol ]	+environment [ RasMol ]
		CC8	[ RasMol ]	+environment [ RasMol ]
		CC9	[ RasMol ]	+environment [ RasMol ]
		DC1	[ RasMol ]	+environment [ RasMol ]
		DC2	[ RasMol ]	+environment [ RasMol ]
		DC3	[ RasMol ]	+environment [ RasMol ]
		DC4	[ RasMol ]	+environment [ RasMol ]
		DC5	[ RasMol ]	+environment [ RasMol ]
		DC6	[ RasMol ]	+environment [ RasMol ]
		DC7	[ RasMol ]	+environment [ RasMol ]
		DC8	[ RasMol ]	+environment [ RasMol ]
		DC9	[ RasMol ]	+environment [ RasMol ]
		EC1	[ RasMol ]	+environment [ RasMol ]

	Cis Peptide Bonds
(no "Cis Peptide Bonds" information available for 2zrt)

Biological Units
	Complete Structure
		Biological Unit 1	[ Jena3D ]
		Biological Unit 2	[ Jena3D ]
		Biological Unit 3	[ Jena3D ]
		Biological Unit 4	[ Jena3D ]

Jmol
	protein: cartoon or spacefill or dots and stick; nucleic acid: cartoon and stick; ligands: spacefill; active site: stick [ Asym. Unit PNG format \| Asym. Unit - sites PNG format \| Biol. Unit 1 PNG format \| Biol. Unit 1 - sites PNG format \| Biol. Unit 2 PNG format \| Biol. Unit 3 PNG format \| Biol. Unit 4 PNG format ](automatic orientation, automatically generated)
Molscript
	protein, nucleic acid: cartoon; ligands: spacefill; active site: ball and stick [ mono PDF format \| stereo PDF format ](default orientation, automatically generated)

Access by PDB/NDB ID
	2zrt
		Family and Domain Information	:	ProDom \| SYSTERS
		General Structural Information	:	GlycoscienceDB \| MMDB \| NDB \| OCA \| PDB \| PDBe \| PDBj \| PDBsum \| PDBWiki \| PQS \| PROTEOPEDIA
		Orientation in Membranes	:	OPM
		Protein Surface	:	SURFACE
		Secondary Structure	:	DSSP (structure derived) \| HSSP (homology derived)
		Structural Genomics	:	GeneCensus
		Structural Neighbours	:	CE \| VAST
		Structure Classification	:	CATH \| Dali \| SCOP
		Validation and Original Data	:	BMRB Data View \| BMRB Restraints Grid \| EDS \| PROCHECK \| RECOORD \| WHAT_CHECK

Access by UniProt ID/Accession number
	PDCD6_HUMAN \| O75340
		Comparative Protein Structure Models	:	ModBase
		Genomic Information	:	Ensembl
		Protein-protein Interaction	:	DIP
		Sequence, Family and Domain Information	:	InterPro \| Pfam \| SMART \| UniProtKB/SwissProt

Access by Enzyme Classificator (EC Number)
	(no 'Enzyme Classificator' available)
		General Enzyme Information	:	BRENDA \| EC-PDB \| Enzyme \| IntEnz
		Pathway	:	KEGG \| MetaCyc

Access by Disease Identifier (MIM ID)
	(no 'MIM ID' available)
		Disease Information	:	OMIM

Access by GenAge ID
	(no 'GenAge ID' available)
		Age Related Information	:	GenAge

Access by PDB/NDB ID
		Domain Information	:	XDom
		Interatomic Contacts of Structural Units	:	CSU
		Ligand-protein Contacts	:	LPC
		Protein Cavities	:	castP
		Sequence and Secondary Structure	:	PDBCartoon
		Structure Alignment	:	STRAP(Java WebStart application, automatic local installation, requires Java; full application with system access!)
		Structure and Sequence Browser	:	STING

Access by UniProt ID/Accession number
	PDCD6_HUMAN \| O75340
		Protein Disorder Prediction	:	DisEMBL \| FoldIndex \| GLOBPLOT (for more information see DisProt)

UniProtKB/Swiss-Prot
	PDCD6_HUMAN \| O75340	:	2zn8 2zn9 2znd 2zne 2zrs 3aaj 3aak 3wxa 5gqq

2zn9	CRYSTAL STRUCTURE OF CA2+-BOUND FORM OF DES3-20ALG-2
2znd	CRYSTAL STRUCTURE OF CA2+-FREE FORM OF DES3-20ALG-2
2zne	CRYSTAL STRUCTURE OF ZN+-BOUND FORM OF DES3-23ALG-2 COMPLEXED WITH ALIX ABS PEPTIDE
2zrs	CRYSTAL STRUCTURE OF CA2+-BOUND FORM OF DES3-23ALG-2

Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (1, 37)

Sites (37, 37)

SS Bonds (0, 0)

Cis Peptide Bonds (0, 0)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (2, 16)

PROSITE Motifs (2, 32)

Exons (0, 0)

Sequences/Alignments

Classification and Annotation

SCOP Domains (0, 0)

CATH Domains (0, 0)

Pfam Domains (2, 16)

Gene Ontology (35, 35)

Visualization

Interactive Views

Still Images

Databases and Analysis Tools

Databases

Analysis Tools

Related Entries

Entries Sharing at Least One Protein Chain (UniProt ID)

Related Entries Specified in the PDB File