Chain A from PDB Type:PROTEIN Length:149
aligned with RNH_SHEON | Q8EE30 from UniProtKB/Swiss-Prot Length:158
Alignment length:152
12 22 32 42 52 62 72 82 92 102 112 122 132 142 152
RNH_SHEON 3 ELKLIHIFTDGSCLGNPGPGGYGIVMNYKGHTKEMSDGFSLTTNNRMELLAPIVALEALKEPCKIILTSDSQYMRQGIMTWIHGWKKKGWMTSNRTPVKNVDLWKRLDKAAQLHQIDWRWVKGHAGHAENERCDQLARAAAEANPTQIDTGY 154
SCOP domains d2zqba_ A: automated matches SCOP domains
CATH domains 2zqbA00 A:3-154 [code=3.30.420.10, no name defined] CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..eeeeeeeeee.....eeeeeeeeeee..eeeeeeeeeeeehhhhhhhhhhhhhhhh....eeeeeee.hhhhhhhhhhhhhhhhh............hhhhhhhhhhhhh..eeeeee..---...hhhhhhhhhhhhhhh......... Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE RNASE_H PDB: A:3-144 UniProt: 3-144 ---------- PROSITE
Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2zqb A 3 ELKLIHIFTDGSCLGNPGPGGYGIVMKYKGHTKEMSGGFSLTTNNRMELLAPIVALEALKEPCKIILTSDSQYVRQGIMTWIHGWKKNGWMTSNGTPVKNVDLWKRLDKAAQLHQIDWRWVK---GHAENERCHQLARAAAEANPTQIDTGY 154
12 22 32 42 52 62 72 82 92 102 112 122 | | 132 142 152
124 128
Chain B from PDB Type:PROTEIN Length:147
aligned with RNH_SHEON | Q8EE30 from UniProtKB/Swiss-Prot Length:158
Alignment length:151
13 23 33 43 53 63 73 83 93 103 113 123 133 143 153
RNH_SHEON 4 LKLIHIFTDGSCLGNPGPGGYGIVMNYKGHTKEMSDGFSLTTNNRMELLAPIVALEALKEPCKIILTSDSQYMRQGIMTWIHGWKKKGWMTSNRTPVKNVDLWKRLDKAAQLHQIDWRWVKGHAGHAENERCDQLARAAAEANPTQIDTGY 154
SCOP domains d2zqbb_ B: automated matches SCOP domains
CATH domains 2zqbB00 B:4-154 [code=3.30.420.10, no name defined] CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..eeeeeeeeee....eeeeeeeeeee..eeeeeeeeeeeehhhhhhhhhhhhhhhh.....eeeeee.hhhhhhhhhhhhhhhhhh...........hhhhhhhhhhhhhh.eeeeee...----hhhhhhhhhhhhhhhh......... Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE RNASE_H PDB: - UniProt: 3-144 ---------- PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2zqb B 4 LKLIHIFTDGSCLGNPGPGGYGIVMKYKGHTKEMSGGFSLTTNNRMELLAPIVALEALKEPCKIILTSDSQYVRQGIMTWIHGWKKNGWMTSNGTPVKNVDLWKRLDKAAQLHQIDWRWVKG----AENERCHQLARAAAEANPTQIDTGY 154
13 23 33 43 53 63 73 83 93 103 113 123 | |133 143 153
125 130
Chain C from PDB Type:PROTEIN Length:151
aligned with RNH_SHEON | Q8EE30 from UniProtKB/Swiss-Prot Length:158
Alignment length:151
13 23 33 43 53 63 73 83 93 103 113 123 133 143 153
RNH_SHEON 4 LKLIHIFTDGSCLGNPGPGGYGIVMNYKGHTKEMSDGFSLTTNNRMELLAPIVALEALKEPCKIILTSDSQYMRQGIMTWIHGWKKKGWMTSNRTPVKNVDLWKRLDKAAQLHQIDWRWVKGHAGHAENERCDQLARAAAEANPTQIDTGY 154
SCOP domains d2zqbc_ C: automated matches SCOP domains
CATH domains 2zqbC00 C:4-154 [code=3.30.420.10, no name defined] CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .eeeeeeeeee.....eeeeeeeeeee..eeeeeeeeeeeehhhhhhhhhhhhhhhhh...eeeeeee.hhhhhhhhhhhhhhhhh............hhhhhhhhhhhhhhheeeeee......hhhhhhhhhhhhhhhh.......... Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE RNASE_H PDB: - UniProt: 3-144 ---------- PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2zqb C 4 LKLIHIFTDGSCLGNPGPGGYGIVMKYKGHTKEMSGGFSLTTNNRMELLAPIVALEALKEPCKIILTSDSQYVRQGIMTWIHGWKKNGWMTSNGTPVKNVDLWKRLDKAAQLHQIDWRWVKGHAGHAENERCHQLARAAAEANPTQIDTGY 154
13 23 33 43 53 63 73 83 93 103 113 123 133 143 153
Chain D from PDB Type:PROTEIN Length:152
aligned with RNH_SHEON | Q8EE30 from UniProtKB/Swiss-Prot Length:158
Alignment length:152
12 22 32 42 52 62 72 82 92 102 112 122 132 142 152
RNH_SHEON 3 ELKLIHIFTDGSCLGNPGPGGYGIVMNYKGHTKEMSDGFSLTTNNRMELLAPIVALEALKEPCKIILTSDSQYMRQGIMTWIHGWKKKGWMTSNRTPVKNVDLWKRLDKAAQLHQIDWRWVKGHAGHAENERCDQLARAAAEANPTQIDTGY 154
SCOP domains d2zqbd_ D: automated matches SCOP domains
CATH domains 2zqbD00 D:3-154 [code=3.30.420.10, no name defined] CATH domains
Pfam domains (1) --RNase_H-2zqbD01 D:5-144 ---------- Pfam domains (1)
Pfam domains (2) --RNase_H-2zqbD02 D:5-144 ---------- Pfam domains (2)
Pfam domains (3) --RNase_H-2zqbD03 D:5-144 ---------- Pfam domains (3)
Pfam domains (4) --RNase_H-2zqbD04 D:5-144 ---------- Pfam domains (4)
Sec.struct. author ...eeeeeeeeee....eeeeeeeeeee..eeeeeeeeeeeehhhhhhhhhhhhhhhh.....eeeeee.hhhhhhhhhhhhhhhhhh...........hhhhhhhhhhhhh..eeeeee......hhhhhhhhhhhhhhhh.......... Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE RNASE_H PDB: D:3-144 UniProt: 3-144 ---------- PROSITE
Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
2zqb D 3 ELKLIHIFTDGSCLGNPGPGGYGIVMKYKGHTKEMSGGFSLTTNNRMELLAPIVALEALKEPCKIILTSDSQYVRQGIMTWIHGWKKNGWMTSNGTPVKNVDLWKRLDKAAQLHQIDWRWVKGHAGHAENERCHQLARAAAEANPTQIDTGY 154
12 22 32 42 52 62 72 82 92 102 112 122 132 142 152
| Legend: |
|
→ Mismatch |
(orange background) |
| |
- |
→ Gap |
(green background, '-', border residues have a numbering label) |
| |
|
→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
| |
x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
| |
extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |
Description
