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(-) Description

Title :  CRYSTAL STRUCTURE OF A DOMAIN-SWAPPED SERPIN DIMER
 
Authors :  M. Yamasaki, J. A. Huntington
Date :  25 Apr 08  (Deposition) - 21 Oct 08  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.80
Chains :  Asym./Biol. Unit :  A,B
Keywords :  Domain-Swap, Blood Coagulation, Disease Mutation, Glycoprotein, Heparin-Binding, Protease Inhibitor, Secreted, Serine Protease Inhibitor, Thrombophilia, Blood Clotting (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  M. Yamasaki, W. Li, D. J. Johnson, J. A. Huntington
Crystal Structure Of A Stable Dimer Reveals The Molecular Basis Of Serpin Polymerization
Nature V. 455 1255 2008
PubMed-ID: 18923394  |  Reference-DOI: 10.1038/NATURE07394

(-) Compounds

Molecule 1 - ANTITHROMBIN-III
    ChainsA, B
    Organism CommonHUMAN
    Organism ScientificHOMO SAPIENS
    Organism Taxid9606
    Other DetailsFROM BLOOD PLASMA
    SynonymATIII

 Structural Features

(-) Chains, Units

  12
Asymmetric/Biological Unit AB

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (3, 12)

Asymmetric/Biological Unit (3, 12)
No.NameCountTypeFull Name
1CIT2Ligand/IonCITRIC ACID
2MAN2Ligand/IonALPHA-D-MANNOSE
3NAG8Ligand/IonN-ACETYL-D-GLUCOSAMINE

(-) Sites  (6, 6)

Asymmetric Unit (6, 6)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREASN A:96BINDING SITE FOR RESIDUE NAG A 501
2AC2SOFTWAREASN A:18 , PRO A:19 , MET A:20 , ASN A:155 , THR A:157 , ALA B:356 , GLU B:357BINDING SITE FOR RESIDUE NAG A 601
3AC3SOFTWAREASN A:18BINDING SITE FOR RESIDUE NAG A 602
4AC4SOFTWAREALA A:356 , GLU A:357 , ASN B:18 , MET B:20 , ASN B:155 , THR B:157BINDING SITE FOR RESIDUE NAG B 601
5AC6SOFTWAREHIS B:1 , GLY B:2 , SER B:3BINDING SITE FOR RESIDUE CIT B 604
6AC7SOFTWAREARG B:145 , TRP B:189 , LYS B:193BINDING SITE FOR RESIDUE CIT B 605

(-) SS Bonds  (6, 6)

Asymmetric/Biological Unit
No.Residues
1A:8 -A:128
2A:21 -A:95
3A:247 -A:430
4B:8 -B:128
5B:21 -B:95
6B:247 -B:430

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 2ZNH)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (84, 168)

Asymmetric/Biological Unit (84, 168)
  dbSNPPDB
No.SourceVariant IDVariantUniProt IDStatusIDChainVariant
01UniProtVAR_007033I39NANT3_HUMANDisease (AT3D)28929468A/BI7N
02UniProtVAR_007034M52TANT3_HUMANUnclassified  ---A/BM20T
03UniProtVAR_071199C53FANT3_HUMANDisease (AT3D)  ---A/BC21F
04UniProtVAR_007035R56CANT3_HUMANDisease (AT3D)28929469A/BR24C
05UniProtVAR_007037R79CANT3_HUMANDisease (AT3D)121909547A/BR47C
06UniProtVAR_007038R79HANT3_HUMANDisease (AT3D)121909552A/BR47H
07UniProtVAR_007039R79SANT3_HUMANDisease (AT3D)121909547A/BR47S
08UniProtVAR_007041R89CANT3_HUMANDisease (AT3D)147266200A/BR57C
09UniProtVAR_007042F90LANT3_HUMANDisease (AT3D)  ---A/BF58L
10UniProtVAR_027452Y95CANT3_HUMANDisease (AT3D)  ---A/BY63C
11UniProtVAR_012316Y95SANT3_HUMANDisease (AT3D)  ---A/BY63S
12UniProtVAR_027453L98PANT3_HUMANDisease (AT3D)  ---A/BL66P
13UniProtVAR_007044P112TANT3_HUMANDisease (AT3D)  ---A/BP80T
14UniProtVAR_027454M121KANT3_HUMANDisease (AT3D)  ---A/BM89K
15UniProtVAR_071200G125DANT3_HUMANDisease (AT3D)  ---A/BG93D
16UniProtVAR_027455C127RANT3_HUMANDisease (AT3D)121909573A/BC95R
17UniProtVAR_007045L131FANT3_HUMANDisease (AT3D)121909567A/BL99F
18UniProtVAR_007046L131VANT3_HUMANDisease (AT3D)  ---A/BL99V
19UniProtVAR_007047Q133KANT3_HUMANDisease (AT3D)  ---A/BQ101K
20UniProtVAR_027456K146EANT3_HUMANDisease (AT3D)  ---A/BK114E
21UniProtVAR_013085T147AANT3_HUMANPolymorphism2227606A/BT115A
22UniProtVAR_007049S148PANT3_HUMANDisease (AT3D)121909569A/BS116P
23UniProtVAR_007050Q150PANT3_HUMANDisease (AT3D)765445413A/BQ118P
24UniProtVAR_007051H152YANT3_HUMANDisease (AT3D)  ---A/BH120Y
25UniProtVAR_007053L158PANT3_HUMANDisease (AT3D)  ---A/BL126P
26UniProtVAR_027457C160YANT3_HUMANDisease (AT3D)  ---A/BC128Y
27UniProtVAR_007054R161QANT3_HUMANDisease (AT3D)121909563A/BR129Q
28UniProtVAR_071201S170PANT3_HUMANDisease (AT3D)  ---A/BS138P
29UniProtVAR_027458L178HANT3_HUMANDisease (AT3D)  ---A/BL146H
30UniProtVAR_027459F179LANT3_HUMANDisease (AT3D)  ---A/BF147L
31UniProtVAR_007055Y190CANT3_HUMANPolymorphism  ---A/BY158C
32UniProtVAR_007056Y198CANT3_HUMANDisease (AT3D)  ---A/BY166C
33UniProtVAR_027460Y198HANT3_HUMANDisease (AT3D)  ---A/BY166H
34UniProtVAR_027461S214FANT3_HUMANDisease (AT3D)  ---A/BS182F
35UniProtVAR_007057S214YANT3_HUMANDisease (AT3D)483352854A/BS182Y
36UniProtVAR_071202I218NANT3_HUMANDisease (AT3D)  ---A/BI186N
37UniProtVAR_007059N219DANT3_HUMANDisease (AT3D)121909571A/BN187D
38UniProtVAR_007058N219KANT3_HUMANDisease (AT3D)  ---A/BN187K
39UniProtVAR_027463S223PANT3_HUMANDisease (AT3D)121909572A/BS191P
40UniProtVAR_027464T243IANT3_HUMANDisease (AT3D)  ---A/BT211I
41UniProtVAR_071203V248GANT3_HUMANDisease (AT3D)  ---A/BV216G
42UniProtVAR_027465I251TANT3_HUMANDisease (AT3D)  ---A/BI219T
43UniProtVAR_027466W257RANT3_HUMANDisease (AT3D)  ---A/BW225R
44UniProtVAR_027467F261LANT3_HUMANDisease (AT3D)  ---A/BF229L
45UniProtVAR_007060E269KANT3_HUMANDisease (AT3D)758087836A/BE237K
46UniProtVAR_007062M283IANT3_HUMANDisease (AT3D)  ---A/BM251I
47UniProtVAR_027468M283VANT3_HUMANDisease (AT3D)  ---A/BM251V
48UniProtVAR_071204R293PANT3_HUMANDisease (AT3D)  ---A/BR261P
49UniProtVAR_007063L302PANT3_HUMANDisease (AT3D)  ---A/BL270P
50UniProtVAR_007064I316NANT3_HUMANDisease (AT3D)  ---A/BI284N
51UniProtVAR_027469S323PANT3_HUMANDisease (AT3D)  ---A/BS291P
52UniProtVAR_007065E334KANT3_HUMANDisease (AT3D)  ---A/BE302K
53UniProtVAR_007067S381PANT3_HUMANDisease (AT3D)121909565A/BS349P
54UniProtVAR_007068R391QANT3_HUMANPolymorphism201541724A/BR359Q
55UniProtVAR_027470S397PANT3_HUMANDisease (AT3D)  ---A/BS365P
56UniProtVAR_027471D398HANT3_HUMANDisease (AT3D)  ---A/BD366H
57UniProtVAR_071205H401RANT3_HUMANDisease (AT3D)  ---A/BH369R
58UniProtVAR_027472S412RANT3_HUMANDisease (AT3D)  ---A/BS380R
59UniProtVAR_007069A414TANT3_HUMANDisease (AT3D)121909557A/BA382T
60UniProtVAR_007070A416PANT3_HUMANDisease (AT3D)28930978A/BA384P
61UniProtVAR_007071A416SANT3_HUMANDisease (AT3D)121909548A/BA384S
62UniProtVAR_007072A419VANT3_HUMANDisease (AT3D)121909568A/BA387V
63UniProtVAR_007073G424DANT3_HUMANDisease (AT3D)121909566A/BG392D
64UniProtVAR_007075R425CANT3_HUMANDisease (AT3D)121909554A/BR393C
65UniProtVAR_007074R425HANT3_HUMANDisease (AT3D)121909549A/BR393H
66UniProtVAR_007076R425PANT3_HUMANDisease (AT3D)121909549A/BR393P
67UniProtVAR_007077S426LANT3_HUMANDisease (AT3D)121909550A/BS394L
68UniProtVAR_007078F434CANT3_HUMANDisease (AT3D)  ---A/BF402C
69UniProtVAR_007080F434LANT3_HUMANDisease (AT3D)  ---A/BF402L
70UniProtVAR_007079F434SANT3_HUMANDisease (AT3D)  ---A/BF402S
71UniProtVAR_007081A436TANT3_HUMANDisease (AT3D)121909546A/BA404T
72UniProtVAR_007082N437KANT3_HUMANDisease (AT3D)  ---A/BN405K
73UniProtVAR_009258R438GANT3_HUMANDisease (AT3D)  ---A/BR406G
74UniProtVAR_007083R438MANT3_HUMANDisease (AT3D)  ---A/BR406M
75UniProtVAR_071206P439AANT3_HUMANDisease (AT3D)  ---A/BP407A
76UniProtVAR_007084P439LANT3_HUMANDisease (AT3D)121909555A/BP407L
77UniProtVAR_007085P439TANT3_HUMANDisease (AT3D)  ---A/BP407T
78UniProtVAR_027473L441PANT3_HUMANDisease (AT3D)  ---A/BL409P
79UniProtVAR_007086I453TANT3_HUMANDisease (AT3D)  ---A/BI421T
80UniProtVAR_007087G456RANT3_HUMANDisease (AT3D)  ---A/BG424R
81UniProtVAR_007088R457TANT3_HUMANDisease (AT3D)  ---A/BR425T
82UniProtVAR_007090A459DANT3_HUMANDisease (AT3D)  ---A/BA427D
83UniProtVAR_007091P461LANT3_HUMANDisease (AT3D)121909564A/BP429L
84UniProtVAR_007092C462FANT3_HUMANDisease (AT3D)  ---A/BC430F

  SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

(-) PROSITE Motifs  (1, 2)

Asymmetric/Biological Unit (1, 2)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1SERPINPS00284 Serpins signature.ANT3_HUMAN434-444
 
  2A:402-412
B:402-412

(-) Exons   (6, 12)

Asymmetric/Biological Unit (6, 12)
 ENSEMBLUniProtKBPDB
No.Transcript IDExonExon IDGenome LocationLengthIDLocationLengthCountLocationLength
1.1aENST000003676981aENSE00001944151chr1:173886516-173886357160ANT3_HUMAN1-14140--
1.3aENST000003676983aENSE00000814673chr1:173884057-173883691367ANT3_HUMAN14-1361232A:1-104 (gaps)
B:1-104 (gaps)
104
104
1.4cENST000003676984cENSE00000789910chr1:173881152-173880937216ANT3_HUMAN137-208722A:105-176 (gaps)
B:105-176 (gaps)
72
72
1.5aENST000003676985aENSE00000789909chr1:173880029-173879892138ANT3_HUMAN209-254462A:177-222
B:177-222
46
46
1.6bENST000003676986bENSE00000789908chr1:173879080-173878690391ANT3_HUMAN255-3851312A:223-353
B:223-353
131
131
1.7aENST000003676987aENSE00001383315chr1:173876652-17387658865ANT3_HUMAN385-406222A:353-374
B:353-374
22
22
1.8aENST000003676988aENSE00001876994chr1:173873203-173872947257ANT3_HUMAN407-464582A:375-430
B:375-431
56
57

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain A from PDB  Type:PROTEIN  Length:408
 aligned with ANT3_HUMAN | P01008 from UniProtKB/Swiss-Prot  Length:464

    Alignment length:430
                                    42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422       432       442       452       462
           ANT3_HUMAN    33 HGSPVDICTAKPRDIPMNPMCIYRSPEKKATEDEGSEQKIPEATNRRVWELSKANSRFATTFYQHLADSKNDNDNIFLSPLSISTAFAMTKLGACNDTLQQLMEVFKFDTISEKTSDQIHFFFAKLNCRLYRKANKSSKLVSANRLFGDKSLTFNETYQDISELVYGAKLQPLDFKENAEQSRAAINKWVSNKTEGRITDVIPSEAINELTVLVLVNTIYFKGLWKSKFSPENTRKELFYKADGESCSASMMYQEGKFRYRRVAEGTQVLELPFKGDDITMVLILPKPEKSLAKVEKELTPEVLQEWLDELEEMMLVVHMPRFRIEDGFSLKEQLQDMGLVDLFSPEKSKLPGIVAEGRDDLYVSDAFHKAFLEVNEEGSEAAASTAVVIAGRSLNPNRVTFKANRPFLVFIREVPLNTIIFMGRVANPC 462
               SCOP domains d2znha_ A: Antithrombin                                                                                                                                                                                                                                                                                                                                                                                                                        SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..........................-----------------.hhhhhhhhhhhhhhhhhhhhhhhhh......eeehhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhh.-----.eeeeeeeeeee.....hhhhhhhhhhhhh.eeeeehhhhhhhhhhhhhhhhhhhhh................eeeeeeeeeeeeee.....hhhhheeeeee.....eeeeeeeeeeeeeeeee.hhh.eeeeee.....eeeeeee.....hhhhhhhhhhhhhhhhhhh..eeeeeeeeee.eeeeeeeehhhhhhh...hhhhh.................eeeeeeeeeeeee...eeeeeeeeeeeee................eeeeeee....eeeeeeee.... Sec.struct. author
             SAPs(SNPs) (1) ------N------------TF--C----------------------C---------CL----C--P-------------T--------K---D-R---F-K------------EAP-P-Y-----P-YQ--------P-------HL----------C-------C---------------F---ND---P-------------------I----G--T-----R---L-------K-------------I---------P--------P-------------N------P----------K----------------------------------------------P---------Q-----PH--R----------R-T-P--V----DCL-------C-TKGA-P-----------T--RT-D-LF SAPs(SNPs) (1)
             SAPs(SNPs) (2) ----------------------------------------------H---------------S-----------------------------------V------------------------------------------------------------------H---------------Y----K---------------------------------------------------------------V------------------------------------------------------------------------------------------------------------------------------------S--------H--------L---ML----------------------- SAPs(SNPs) (2)
             SAPs(SNPs) (3) ----------------------------------------------S---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------P--------S----T----------------------- SAPs(SNPs) (3)
                    PROSITE -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SERPIN     ------------------ PROSITE
           Transcript 1 (1) Exon 1.3a  PDB: A:1-104 (gaps) UniProt: 14-136 [INCOMPLETE]                                             Exon 1.4c  PDB: A:105-176 (gaps) UniProt: 137-208                       Exon 1.5a  PDB: A:177-222 UniProt: 209-254    Exon 1.6b  PDB: A:223-353 UniProt: 255-385                                                                                         ---------------------Exon 1.8a  PDB: A:375-430 UniProt: 407-464 [INCOMPLETE]  Transcript 1 (1)
           Transcript 1 (2) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Exon 1.7a             -------------------------------------------------------- Transcript 1 (2)
                 2znh A   1 HGSPVDICTAKPRDIPMNPMCIYRSP-----------------TNRRVWELSKANSRFATTFYQHLADSKNDNDNIFLSPLSISTAFAMTKLGACNDTLQQLMEVFKFDTISEKTSDQIHFFFAKLNCRLYR-----SKLVSANRLFGDKSLTFNETYQDISELVYGAKLQPLDFKENAEQSRAAINKWVSNKTEGRITDVIPSEAINELTVLVLVNTIYFKGLWKSKFSPENTRKELFYKADGESCSASMMYQEGKFRYRRVAEGTQVLELPFKGDDITMVLILPKPEKSLAKVEKELTPEVLQEWLDELEEMMLVVHMPRFRIEDGFSLKEQLQDMGLVDLFSPEKSKLPGIVAEGRDDLYVSDAFHKAFLEVNEEGSEAAASTAVVIAGRSLNPNRVTFKANRPFLVFIREVPLNTIIFMGRVANPC 430
                                    10        20     |   -         -   |    50        60        70        80        90       100       110       120       130 |     140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430
                                                    26                44                                                                                     132   138                                                                                                                                                                                                                                                                                                    

Chain B from PDB  Type:PROTEIN  Length:412
 aligned with ANT3_HUMAN | P01008 from UniProtKB/Swiss-Prot  Length:464

    Alignment length:431
                                    42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422       432       442       452       462 
           ANT3_HUMAN    33 HGSPVDICTAKPRDIPMNPMCIYRSPEKKATEDEGSEQKIPEATNRRVWELSKANSRFATTFYQHLADSKNDNDNIFLSPLSISTAFAMTKLGACNDTLQQLMEVFKFDTISEKTSDQIHFFFAKLNCRLYRKANKSSKLVSANRLFGDKSLTFNETYQDISELVYGAKLQPLDFKENAEQSRAAINKWVSNKTEGRITDVIPSEAINELTVLVLVNTIYFKGLWKSKFSPENTRKELFYKADGESCSASMMYQEGKFRYRRVAEGTQVLELPFKGDDITMVLILPKPEKSLAKVEKELTPEVLQEWLDELEEMMLVVHMPRFRIEDGFSLKEQLQDMGLVDLFSPEKSKLPGIVAEGRDDLYVSDAFHKAFLEVNEEGSEAAASTAVVIAGRSLNPNRVTFKANRPFLVFIREVPLNTIIFMGRVANPCV 463
               SCOP domains d2znhb_ B: Antithrombin                                                                                                                                                                                                                                                                                                                                                                                                                         SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
           Pfam domains (1) ---------------------------               ----------Serpin-2znhB01 B:53-429                                                                                                                                                                                                                                                                                                                                                                  -- Pfam domains (1)
           Pfam domains (2) ---------------------------               ----------Serpin-2znhB02 B:53-429                                                                                                                                                                                                                                                                                                                                                                  -- Pfam domains (2)
         Sec.struct. author .......................ee..---------------..hhhhhhhhhhhhhhhhhhhhhhhhh......eeehhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhh..eehhhhhhhhhhhhhhhh.----..eeeeeeeeeee.....hhhhhhhhhhhhh.eeeeehhhhhhhhhhhhhhhhhhhhh................eeeeeeeeeeeeee.....hhhhheeeeee.....eeeeeeeeeeeeeeeee.hhh.eeeeee.....eeeeeee.....hhhhhhhhhhhhhhhhhhhh.eeeeeeeeee.eeeeeeeehhhhhh....hhhhh................eeeeeeeeeeeeee...eeeeeeeeeeeeee...............eeeeeee....eeeeeeee..... Sec.struct. author
             SAPs(SNPs) (1) ------N------------TF--C----------------------C---------CL----C--P-------------T--------K---D-R---F-K------------EAP-P-Y-----P-YQ--------P-------HL----------C-------C---------------F---ND---P-------------------I----G--T-----R---L-------K-------------I---------P--------P-------------N------P----------K----------------------------------------------P---------Q-----PH--R----------R-T-P--V----DCL-------C-TKGA-P-----------T--RT-D-LF- SAPs(SNPs) (1)
             SAPs(SNPs) (2) ----------------------------------------------H---------------S-----------------------------------V------------------------------------------------------------------H---------------Y----K---------------------------------------------------------------V------------------------------------------------------------------------------------------------------------------------------------S--------H--------L---ML------------------------ SAPs(SNPs) (2)
             SAPs(SNPs) (3) ----------------------------------------------S---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------P--------S----T------------------------ SAPs(SNPs) (3)
                    PROSITE -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SERPIN     ------------------- PROSITE
           Transcript 1 (1) Exon 1.3a  PDB: B:1-104 (gaps) UniProt: 14-136 [INCOMPLETE]                                             Exon 1.4c  PDB: B:105-176 (gaps) UniProt: 137-208                       Exon 1.5a  PDB: B:177-222 UniProt: 209-254    Exon 1.6b  PDB: B:223-353 UniProt: 255-385                                                                                         ---------------------Exon 1.8a  PDB: B:375-431 UniProt: 407-464 [INCOMPLETE]   Transcript 1 (1)
           Transcript 1 (2) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Exon 1.7a             --------------------------------------------------------- Transcript 1 (2)
                 2znh B   1 HGSPVDICTAKPRDIPMNPMCIYRSPE---------------ATNRRVWELSKANSRFATTFYQHLADSKNDNDNIFLSPLSISTAFAMTKLGACNDTLQQLMEVFKFDTISEKTSDQIHFFFAKLNCRLYR----SSKLVSANRLFGDKSLTFNETYQDISELVYGAKLQPLDFKENAEQSRAAINKWVSNKTEGRITDVIPSEAINELTVLVLVNTIYFKGLWKSKFSPENTRKELFYKADGESCSASMMYQEGKFRYRRVAEGTQVLELPFKGDDITMVLILPKPEKSLAKVEKELTPEVLQEWLDELEEMMLVVHMPRFRIEDGFSLKEQLQDMGLVDLFSPEKSKLPGIVAEGRDDLYVSDAFHKAFLEVNEEGSEAAASTAVVIAGRSLNPNRVTFKANRPFLVFIREVPLNTIIFMGRVANPCV 431
                                    10        20      |  -         -  |     50        60        70        80        90       100       110       120       130 |    |140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430 
                                                     27              43                                                                                      132  137                                                                                                                                                                                                                                                                                                      

   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 2)

Asymmetric/Biological Unit

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 2ZNH)

(-) Pfam Domains  (1, 2)

Asymmetric/Biological Unit

(-) Gene Ontology  (17, 17)

Asymmetric/Biological Unit(hide GO term definitions)
Chain A,B   (ANT3_HUMAN | P01008)
molecular function
    GO:0008201    heparin binding    Interacting selectively and non-covalently with heparin, any member of a group of glycosaminoglycans found mainly as an intracellular component of mast cells and which consist predominantly of alternating alpha-(1->4)-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues.
    GO:0030414    peptidase inhibitor activity    Stops, prevents or reduces the activity of a peptidase, any enzyme that catalyzes the hydrolysis peptide bonds.
    GO:0002020    protease binding    Interacting selectively and non-covalently with any protease or peptidase.
    GO:0005515    protein binding    Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
    GO:0004867    serine-type endopeptidase inhibitor activity    Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme.
biological process
    GO:0007596    blood coagulation    The sequential process in which the multiple coagulation factors of the blood interact, ultimately resulting in the formation of an insoluble fibrin clot; it may be divided into three stages: stage 1, the formation of intrinsic and extrinsic prothrombin converting principle; stage 2, the formation of thrombin; stage 3, the formation of stable fibrin polymers.
    GO:0007599    hemostasis    The stopping of bleeding (loss of body fluid) or the arrest of the circulation to an organ or part.
    GO:0010951    negative regulation of endopeptidase activity    Any process that decreases the frequency, rate or extent of endopeptidase activity, the endohydrolysis of peptide bonds within proteins.
    GO:0050728    negative regulation of inflammatory response    Any process that stops, prevents, or reduces the frequency, rate or extent of the inflammatory response.
    GO:0010466    negative regulation of peptidase activity    Any process that stops or reduces the rate of peptidase activity, the hydrolysis of peptide bonds within proteins.
    GO:2000266    regulation of blood coagulation, intrinsic pathway    Any process that modulates the frequency, rate or extent of blood coagulation, intrinsic pathway.
    GO:0007584    response to nutrient    Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nutrient stimulus.
cellular component
    GO:0072562    blood microparticle    A phospholipid microvesicle that is derived from any of several cell types, such as platelets, blood cells, endothelial cells, or others, and contains membrane receptors as well as other proteins characteristic of the parental cell. Microparticles are heterogeneous in size, and are characterized as microvesicles free of nucleic acids.
    GO:0070062    extracellular exosome    A vesicle that is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane. Extracellular exosomes, also simply called exosomes, have a diameter of about 40-100 nm.
    GO:0005576    extracellular region    The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite.
    GO:0005615    extracellular space    That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid.
    GO:0005886    plasma membrane    The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        ANT3_HUMAN | P010081ant 1ath 1azx 1br8 1dzg 1dzh 1e03 1e04 1e05 1jvq 1lk6 1nq9 1oyh 1r1l 1sr5 1t1f 1tb6 2ant 2b4x 2b5t 2beh 2gd4 2hij 3evj 3kcg 4eb1

(-) Related Entries Specified in the PDB File

(no "Related Entries Specified in the PDB File" available for 2ZNH)