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(-)Asym./Biol. Unit
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Asym./Biol. Unit  (Jmol Viewer)

(-) Description

Title :  OXIDATION OF ARCHAEAL PEROXIREDOXIN INVOLVES A HYPERVALENT SULFUR INTERMEDIATE
 
Authors :  T. Nakamura, Y. Hagihara, M. Abe, T. Inoue, T. Yamamoto, H. Matsumura
Date :  12 Nov 07  (Deposition) - 27 May 08  (Release) - 24 Feb 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.70
Chains :  Asym./Biol. Unit :  A,B,C,D,E,F,G,H,I,J
Keywords :  Thioredoxin Fold, Peroxiredoxin, Oxidoreductase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  T. Nakamura, T. Yamamoto, M. Abe, H. Matsumura, Y. Hagihara, T. Goto, T. Yamaguchi, T. Inoue
Oxidation Of Archaeal Peroxiredoxin Involves A Hypervalent Sulfur Intermediate
Proc. Natl. Acad. Sci. Usa V. 105 6238 2008
PubMed-ID: 18436649  |  Reference-DOI: 10.1073/PNAS.0709822105
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - PROBABLE PEROXIREDOXIN
    Chains: A, B, C, D, E, F, G, H, I, J
    EC Number: 1.11.1.15
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET11
    Expression System Strain: ROSETTA(DE3)
    Expression System Vector Type: PLASMID
    Mutation: YES
    Organism Scientific: AEROPYRUM PERNIX
    Synonym: THIOREDOXIN PEROXIDASE

 Structural Features

(-) Chains, Units

  12345678910
Asymmetric/Biological Unit : ABCDEFGHIJ

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 10)

Asymmetric/Biological Unit (1, 10)
No.NameCountTypeFull Name
1CSO10Mod. Amino AcidS-HYDROXYCYSTEINE

(-) Sites  (0, 0)

(no "Site" information available for 2ZCT)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2ZCT)

(-) Cis Peptide Bonds  (21, 21)

Asymmetric/Biological Unit
No.Residues
1Leu A:26 -Pro A:27
2Trp A:175 -Pro A:176
3Glu A:244 -Ala A:245
4Leu B:26 -Pro B:27
5Trp B:175 -Pro B:176
6Leu C:26 -Pro C:27
7Trp C:175 -Pro C:176
8Leu D:26 -Pro D:27
9Trp D:175 -Pro D:176
10Leu E:26 -Pro E:27
11Trp E:175 -Pro E:176
12Leu F:26 -Pro F:27
13Trp F:175 -Pro F:176
14Leu G:26 -Pro G:27
15Trp G:175 -Pro G:176
16Leu H:26 -Pro H:27
17Trp H:175 -Pro H:176
18Leu I:26 -Pro I:27
19Trp I:175 -Pro I:176
20Leu J:26 -Pro J:27
21Trp J:175 -Pro J:176

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2ZCT)

(-) PROSITE Motifs  (1, 10)

Asymmetric/Biological Unit (1, 10)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1THIOREDOXIN_2PS51352 Thioredoxin domain profile.TDXH_AERPE6-163
 
 
 
 
 
 
 
 
 		  10A:6-163
B:6-163
C:6-163
D:6-163
E:6-163
F:6-163
G:6-163
H:6-163
I:6-163
J:6-163

(-) Exons   (0, 0)

(no "Exon" information available for 2ZCT)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:236
 aligned with TDXH_AERPE | Q9Y9L0 from UniProtKB/Swiss-Prot  Length:250

    Alignment length:240
                                    15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235       245
           TDXH_AERPE     6 PLIGERFPEMEVTTDHGVIKLPDHYVSQGKWFVLFSHPADFTPVCTTEFVSFARRYEDFQRLGVDLIGLSVDSVFSHIKWKEWIERHIGVRIPFPIIADPQGTVARRLGLLHAESATHTVRGVFIVDARGVIRTMLYYPMELGRLVDEILRIVKALKLGDSLKRAVPADWPNNEIIGEGLIVPPPTTEDQARARMESGQYRCLDWWFCWDTPASRDDVEEARRYLRRAAEKPAKLLYEEA 245
               SCOP domains d2zcta_ A: automated matches                                                                                                                                                                                                                     SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .........eeeee..eeeeehhhhhh...eeeeeee....hhhhhhhhhhhhhhhhhhhhh.eeeeeee..hhhhhhhhhhhhhhhhh......eee...hhhhhhh...----......eeeee.....eeeeee.......hhhhhhhhhhhhhhhhhhh................ee.....hhhhhhhhhhhh..eeee..eeee...hhhhhhhhhhhhhhhhh.......... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE THIOREDOXIN_2  PDB: A:6-163 UniProt: 6-163                                                                                                                    ---------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 2zct A   6 PLIGERFPEMEVTTDHGVIKLPDHYVSQGKWFVLFSHPADFTPVcTTEFVSFARRYEDFQRLGVDLIGLSVDSVFSHIKWKEWIERHIGVRIPFPIIADPQGTVARRLGLL----ATHTVRGVFIVDARGVIRTMLYYPMELGRLVDEILRIVKALKLGDSLKRAVPADWPNNEIIGEGLIVPPPTTEDQARARMESGQYRSLDWWFCWDTPASRDDVEEARRYLRRAAEKPAKLLYEEA 245
                                    15        25        35        45    |   55        65        75        85        95       105       115|    | 125       135       145       155       165       175       185       195       205       215       225       235       245
                                                                       50-CSO                                                           116  121                                                                                                                            


Chain B from PDB  Type:PROTEIN  Length:234
 aligned with TDXH_AERPE | Q9Y9L0 from UniProtKB/Swiss-Prot  Length:250

    Alignment length:238
                                    15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195       205       215       225       235        
           TDXH_AERPE     6 PLIGERFPEMEVTTDHGVIKLPDHYVSQGKWFVLFSHPADFTPVCTTEFVSFARRYEDFQRLGVDLIGLSVDSVFSHIKWKEWIERHIGVRIPFPIIADPQGTVARRLGLLHAESATHTVRGVFIVDARGVIRTMLYYPMELGRLVDEILRIVKALKLGDSLKRAVPADWPNNEIIGEGLIVPPPTTEDQARARMESGQYRCLDWWFCWDTPASRDDVEEARRYLRRAAEKPAKLLYE 243
               SCOP domains d2zctb_ B: automated matches                                                                                                                                                                                                                   SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .........eeeee..eeeeehhhhhh...eeeeeee....hhhhhhhhhhhhhhhhhhhhh.eeeeeee..hhhhhhhhhhhhhhhh.......eee...hhhhhhh...----......eeeee.....eeeeee.......hhhhhhhhhhhhhhhhhhh................ee.....hhhhhhhhhhhh..eeee..eeee...hhhhhhhhhhhhhhhhh........ Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE THIOREDOXIN_2  PDB: B:6-163 UniProt: 6-163                                                                                                                    -------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2zct B   6 PLIGERFPEMEVTTDHGVIKLPDHYVSQGKWFVLFSHPADFTPVcTTEFVSFARRYEDFQRLGVDLIGLSVDSVFSHIKWKEWIERHIGVRIPFPIIADPQGTVARRLGLL----ATHTVRGVFIVDARGVIRTMLYYPMELGRLVDEILRIVKALKLGDSLKRAVPADWPNNEIIGEGLIVPPPTTEDQARARMESGQYRSLDWWFCWDTPASRDDVEEARRYLRRAAEKPAKLLYE 243
                                    15        25        35        45    |   55        65        75        85        95       105       115|    | 125       135       145       155       165       175       185       195       205       215       225       235        
                                                                       50-CSO                                                           116  121                                                                                                                          


Chain C from PDB  Type:PROTEIN  Length:237
 aligned with TDXH_AERPE | Q9Y9L0 from UniProtKB/Swiss-Prot  Length:250

    Alignment length:241
                                    14        24        34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244 
           TDXH_AERPE     5 IPLIGERFPEMEVTTDHGVIKLPDHYVSQGKWFVLFSHPADFTPVCTTEFVSFARRYEDFQRLGVDLIGLSVDSVFSHIKWKEWIERHIGVRIPFPIIADPQGTVARRLGLLHAESATHTVRGVFIVDARGVIRTMLYYPMELGRLVDEILRIVKALKLGDSLKRAVPADWPNNEIIGEGLIVPPPTTEDQARARMESGQYRCLDWWFCWDTPASRDDVEEARRYLRRAAEKPAKLLYEEA 245
               SCOP domains d2zctc_ C: automated matches                                                                                                                                                                                                                      SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..........eeeee..eeeeehhhhhh...eeeeeee....hhhhhhhhhhhhhhhhhhhhh.eeeeeee..hhhhhhhhhhhhhhhh.......eee...hhhhhhh...----......eeeee.....eeeeee.......hhhhhhhhhhhhhhhhhhh................ee.....hhhhhhhhhhhh..eeee..eeee...hhhhhhhhhhhhhhhhh....hhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -THIOREDOXIN_2  PDB: C:6-163 UniProt: 6-163                                                                                                                    ---------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2zct C   5 IPLIGERFPEMEVTTDHGVIKLPDHYVSQGKWFVLFSHPADFTPVcTTEFVSFARRYEDFQRLGVDLIGLSVDSVFSHIKWKEWIERHIGVRIPFPIIADPQGTVARRLGLL----ATHTVRGVFIVDARGVIRTMLYYPMELGRLVDEILRIVKALKLGDSLKRAVPADWPNNEIIGEGLIVPPPTTEDQARARMESGQYRSLDWWFCWDTPASRDDVEEARRYLRRAAEKPAKLLYEEA 245
                                    14        24        34        44     |  54        64        74        84        94       104       114 |    |124       134       144       154       164       174       184       194       204       214       224       234       244 
                                                                        50-CSO                                                           116  121                                                                                                                            


Chain D from PDB  Type:PROTEIN  Length:238
 aligned with TDXH_AERPE | Q9Y9L0 from UniProtKB/Swiss-Prot  Length:250

    Alignment length:241
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243 
           TDXH_AERPE     4 SIPLIGERFPEMEVTTDHGVIKLPDHYVSQGKWFVLFSHPADFTPVCTTEFVSFARRYEDFQRLGVDLIGLSVDSVFSHIKWKEWIERHIGVRIPFPIIADPQGTVARRLGLLHAESATHTVRGVFIVDARGVIRTMLYYPMELGRLVDEILRIVKALKLGDSLKRAVPADWPNNEIIGEGLIVPPPTTEDQARARMESGQYRCLDWWFCWDTPASRDDVEEARRYLRRAAEKPAKLLYEE 244
               SCOP domains d2zctd_ D: automated matches                                                                                                                                                                                                                      SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...........eeeee..eeeeehhhhhh...eeeeeee....hhhhhhhhhhhhhhhhhhhhh.eeeeeee..hhhhhhhhhhhhhhhh.......eee...hhhhhhh...---.......eeeee.....eeeeee.......hhhhhhhhhhhhhhhhhhh................ee.....hhhhhhhhhhhh..eeee..eeee...hhhhhhhhhhhhhhhhh......... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --THIOREDOXIN_2  PDB: D:6-163 UniProt: 6-163                                                                                                                    --------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2zct D   4 SIPLIGERFPEMEVTTDHGVIKLPDHYVSQGKWFVLFSHPADFTPVcTTEFVSFARRYEDFQRLGVDLIGLSVDSVFSHIKWKEWIERHIGVRIPFPIIADPQGTVARRLGLL---SATHTVRGVFIVDARGVIRTMLYYPMELGRLVDEILRIVKALKLGDSLKRAVPADWPNNEIIGEGLIVPPPTTEDQARARMESGQYRSLDWWFCWDTPASRDDVEEARRYLRRAAEKPAKLLYEE 244
                                    13        23        33        43      | 53        63        73        83        93       103       113  |   |123       133       143       153       163       173       183       193       203       213       223       233       243 
                                                                         50-CSO                                                           116 120                                                                                                                            


Chain E from PDB  Type:PROTEIN  Length:236
 aligned with TDXH_AERPE | Q9Y9L0 from UniProtKB/Swiss-Prot  Length:250

    Alignment length:240
                                    14        24        34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244
           TDXH_AERPE     5 IPLIGERFPEMEVTTDHGVIKLPDHYVSQGKWFVLFSHPADFTPVCTTEFVSFARRYEDFQRLGVDLIGLSVDSVFSHIKWKEWIERHIGVRIPFPIIADPQGTVARRLGLLHAESATHTVRGVFIVDARGVIRTMLYYPMELGRLVDEILRIVKALKLGDSLKRAVPADWPNNEIIGEGLIVPPPTTEDQARARMESGQYRCLDWWFCWDTPASRDDVEEARRYLRRAAEKPAKLLYEE 244
               SCOP domains d2zcte_ E: automated matches                                                                                                                                                                                                                     SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..........eeeee..eeeeehhhhhh...eeeeeee....hhhhhhhhhhhhhhhhhhhhh.eeeeeee..hhhhhhhhhhhhhhhhh......eee...hhhhhhh...----......eeeee.....eeeeee.......hhhhhhhhhhhhhhhhhhh................ee.....hhhhhhhhhhhh..eeee..eeee...hhhhhhhhhhhhhhhhh......... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE -THIOREDOXIN_2  PDB: E:6-163 UniProt: 6-163                                                                                                                    --------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 2zct E   5 IPLIGERFPEMEVTTDHGVIKLPDHYVSQGKWFVLFSHPADFTPVcTTEFVSFARRYEDFQRLGVDLIGLSVDSVFSHIKWKEWIERHIGVRIPFPIIADPQGTVARRLGLL----ATHTVRGVFIVDARGVIRTMLYYPMELGRLVDEILRIVKALKLGDSLKRAVPADWPNNEIIGEGLIVPPPTTEDQARARMESGQYRSLDWWFCWDTPASRDDVEEARRYLRRAAEKPAKLLYEE 244
                                    14        24        34        44     |  54        64        74        84        94       104       114 |    |124       134       144       154       164       174       184       194       204       214       224       234       244
                                                                        50-CSO                                                           116  121                                                                                                                           


Chain F from PDB  Type:PROTEIN  Length:237
 aligned with TDXH_AERPE | Q9Y9L0 from UniProtKB/Swiss-Prot  Length:250

    Alignment length:241
                                    14        24        34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244 
           TDXH_AERPE     5 IPLIGERFPEMEVTTDHGVIKLPDHYVSQGKWFVLFSHPADFTPVCTTEFVSFARRYEDFQRLGVDLIGLSVDSVFSHIKWKEWIERHIGVRIPFPIIADPQGTVARRLGLLHAESATHTVRGVFIVDARGVIRTMLYYPMELGRLVDEILRIVKALKLGDSLKRAVPADWPNNEIIGEGLIVPPPTTEDQARARMESGQYRCLDWWFCWDTPASRDDVEEARRYLRRAAEKPAKLLYEEA 245
               SCOP domains d2zctf_ F: automated matches                                                                                                                                                                                                                      SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..........eeeee..eeeeehhhhhh...eeeeeee....hhhhhhhhhhhhhhhhhhhhh.eeeeeee..hhhhhhhhhhhhhhhh.......eee...hhhhhhh...----......eeeee.....eeeeee.......hhhhhhhhhhhhhhhhhhh................ee.....hhhhhhhhhhhh..eeee..eeee...hhhhhhhhhhhhhhhhh.......... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -THIOREDOXIN_2  PDB: F:6-163 UniProt: 6-163                                                                                                                    ---------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2zct F   5 IPLIGERFPEMEVTTDHGVIKLPDHYVSQGKWFVLFSHPADFTPVcTTEFVSFARRYEDFQRLGVDLIGLSVDSVFSHIKWKEWIERHIGVRIPFPIIADPQGTVARRLGLL----ATHTVRGVFIVDARGVIRTMLYYPMELGRLVDEILRIVKALKLGDSLKRAVPADWPNNEIIGEGLIVPPPTTEDQARARMESGQYRSLDWWFCWDTPASRDDVEEARRYLRRAAEKPAKLLYEEA 245
                                    14        24        34        44     |  54        64        74        84        94       104       114 |    |124       134       144       154       164       174       184       194       204       214       224       234       244 
                                                                        50-CSO                                                           116  121                                                                                                                            


Chain G from PDB  Type:PROTEIN  Length:237
 aligned with TDXH_AERPE | Q9Y9L0 from UniProtKB/Swiss-Prot  Length:250

    Alignment length:241
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243 
           TDXH_AERPE     4 SIPLIGERFPEMEVTTDHGVIKLPDHYVSQGKWFVLFSHPADFTPVCTTEFVSFARRYEDFQRLGVDLIGLSVDSVFSHIKWKEWIERHIGVRIPFPIIADPQGTVARRLGLLHAESATHTVRGVFIVDARGVIRTMLYYPMELGRLVDEILRIVKALKLGDSLKRAVPADWPNNEIIGEGLIVPPPTTEDQARARMESGQYRCLDWWFCWDTPASRDDVEEARRYLRRAAEKPAKLLYEE 244
               SCOP domains d2zctg_ G: automated matches                                                                                                                                                                                                                      SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...........eeeee..eeeeehhhhhh...eeeeeee....hhhhhhhhhhhhhhhhhhhhh.eeeeeee..hhhhhhhhhhhhhhhh.......eee...hhhhhhh...----......eeeee.....eeeeee.......hhhhhhhhhhhhhhhhhhh................ee.....hhhhhhhhhhhh..eeee..eeee...hhhhhhhhhhhhhhhhh......... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --THIOREDOXIN_2  PDB: G:6-163 UniProt: 6-163                                                                                                                    --------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2zct G   4 SIPLIGERFPEMEVTTDHGVIKLPDHYVSQGKWFVLFSHPADFTPVcTTEFVSFARRYEDFQRLGVDLIGLSVDSVFSHIKWKEWIERHIGVRIPFPIIADPQGTVARRLGLL----ATHTVRGVFIVDARGVIRTMLYYPMELGRLVDEILRIVKALKLGDSLKRAVPADWPNNEIIGEGLIVPPPTTEDQARARMESGQYRSLDWWFCWDTPASRDDVEEARRYLRRAAEKPAKLLYEE 244
                                    13        23        33        43      | 53        63        73        83        93       103       113  |    123       133       143       153       163       173       183       193       203       213       223       233       243 
                                                                         50-CSO                                                           116  121                                                                                                                           


Chain H from PDB  Type:PROTEIN  Length:235
 aligned with TDXH_AERPE | Q9Y9L0 from UniProtKB/Swiss-Prot  Length:250

    Alignment length:239
                                    14        24        34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234         
           TDXH_AERPE     5 IPLIGERFPEMEVTTDHGVIKLPDHYVSQGKWFVLFSHPADFTPVCTTEFVSFARRYEDFQRLGVDLIGLSVDSVFSHIKWKEWIERHIGVRIPFPIIADPQGTVARRLGLLHAESATHTVRGVFIVDARGVIRTMLYYPMELGRLVDEILRIVKALKLGDSLKRAVPADWPNNEIIGEGLIVPPPTTEDQARARMESGQYRCLDWWFCWDTPASRDDVEEARRYLRRAAEKPAKLLYE 243
               SCOP domains d2zcth_ H: automated matches                                                                                                                                                                                                                    SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..........eeeee..eeeeehhhhhh...eeeeeee....hhhhhhhhhhhhhhhhhhhhh.eeeeeee..hhhhhhhhhhhhhhhhh......eee...hhhhhhh...----hhhhh.eeeee.....eeeeee.......hhhhhhhhhhhhhhhhhhh................ee.....hhhhhhhhhhhh..eeee..eeee...hhhhhhhhhhhhhhhhh........ Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -THIOREDOXIN_2  PDB: H:6-163 UniProt: 6-163                                                                                                                    -------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2zct H   5 IPLIGERFPEMEVTTDHGVIKLPDHYVSQGKWFVLFSHPADFTPVcTTEFVSFARRYEDFQRLGVDLIGLSVDSVFSHIKWKEWIERHIGVRIPFPIIADPQGTVARRLGLL----ATHTVRGVFIVDARGVIRTMLYYPMELGRLVDEILRIVKALKLGDSLKRAVPADWPNNEIIGEGLIVPPPTTEDQARARMESGQYRSLDWWFCWDTPASRDDVEEARRYLRRAAEKPAKLLYE 243
                                    14        24        34        44     |  54        64        74        84        94       104       114 |    |124       134       144       154       164       174       184       194       204       214       224       234         
                                                                        50-CSO                                                           116  121                                                                                                                          


Chain I from PDB  Type:PROTEIN  Length:235
 aligned with TDXH_AERPE | Q9Y9L0 from UniProtKB/Swiss-Prot  Length:250

    Alignment length:239
                                    14        24        34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234         
           TDXH_AERPE     5 IPLIGERFPEMEVTTDHGVIKLPDHYVSQGKWFVLFSHPADFTPVCTTEFVSFARRYEDFQRLGVDLIGLSVDSVFSHIKWKEWIERHIGVRIPFPIIADPQGTVARRLGLLHAESATHTVRGVFIVDARGVIRTMLYYPMELGRLVDEILRIVKALKLGDSLKRAVPADWPNNEIIGEGLIVPPPTTEDQARARMESGQYRCLDWWFCWDTPASRDDVEEARRYLRRAAEKPAKLLYE 243
               SCOP domains d2zcti_ I: automated matches                                                                                                                                                                                                                    SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..........eeeee..eeeeehhhhhh...eeeeeee....hhhhhhhhhhhhhhhhhhhhh.eeeeeee..hhhhhhhhhhhhhhhhh......eee...hhhhhhh...----......eeeee.....eeeeee.......hhhhhhhhhhhhhhhhhhh................ee.....hhhhhhhhhhhh..eeee..eeee...hhhhhhhhhhhhhhhhh........ Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -THIOREDOXIN_2  PDB: I:6-163 UniProt: 6-163                                                                                                                    -------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2zct I   5 IPLIGERFPEMEVTTDHGVIKLPDHYVSQGKWFVLFSHPADFTPVcTTEFVSFARRYEDFQRLGVDLIGLSVDSVFSHIKWKEWIERHIGVRIPFPIIADPQGTVARRLGLL----ATHTVRGVFIVDARGVIRTMLYYPMELGRLVDEILRIVKALKLGDSLKRAVPADWPNNEIIGEGLIVPPPTTEDQARARMESGQYRSLDWWFCWDTPASRDDVEEARRYLRRAAEKPAKLLYE 243
                                    14        24        34        44     |  54        64        74        84        94       104       114 |    |124       134       144       154       164       174       184       194       204       214       224       234         
                                                                        50-CSO                                                           116  121                                                                                                                          


Chain J from PDB  Type:PROTEIN  Length:236
 aligned with TDXH_AERPE | Q9Y9L0 from UniProtKB/Swiss-Prot  Length:250

    Alignment length:240
                                    14        24        34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244
           TDXH_AERPE     5 IPLIGERFPEMEVTTDHGVIKLPDHYVSQGKWFVLFSHPADFTPVCTTEFVSFARRYEDFQRLGVDLIGLSVDSVFSHIKWKEWIERHIGVRIPFPIIADPQGTVARRLGLLHAESATHTVRGVFIVDARGVIRTMLYYPMELGRLVDEILRIVKALKLGDSLKRAVPADWPNNEIIGEGLIVPPPTTEDQARARMESGQYRCLDWWFCWDTPASRDDVEEARRYLRRAAEKPAKLLYEE 244
               SCOP domains d2zctj_ J: automated matches                                                                                                                                                                                                                     SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
           Pfam domains (1) ---AhpC-TSA-2zctJ01 J:8-140                                                                                                             -------------------1-cysPrx_C-2zctJ11 J:160-203                ----------------------------------------- Pfam domains (1)
           Pfam domains (2) ---AhpC-TSA-2zctJ02 J:8-140                                                                                                             -------------------1-cysPrx_C-2zctJ12 J:160-203                ----------------------------------------- Pfam domains (2)
           Pfam domains (3) ---AhpC-TSA-2zctJ03 J:8-140                                                                                                             -------------------1-cysPrx_C-2zctJ13 J:160-203                ----------------------------------------- Pfam domains (3)
           Pfam domains (4) ---AhpC-TSA-2zctJ04 J:8-140                                                                                                             -------------------1-cysPrx_C-2zctJ14 J:160-203                ----------------------------------------- Pfam domains (4)
           Pfam domains (5) ---AhpC-TSA-2zctJ05 J:8-140                                                                                                             -------------------1-cysPrx_C-2zctJ15 J:160-203                ----------------------------------------- Pfam domains (5)
           Pfam domains (6) ---AhpC-TSA-2zctJ06 J:8-140                                                                                                             -------------------1-cysPrx_C-2zctJ16 J:160-203                ----------------------------------------- Pfam domains (6)
           Pfam domains (7) ---AhpC-TSA-2zctJ07 J:8-140                                                                                                             -------------------1-cysPrx_C-2zctJ17 J:160-203                ----------------------------------------- Pfam domains (7)
           Pfam domains (8) ---AhpC-TSA-2zctJ08 J:8-140                                                                                                             -------------------1-cysPrx_C-2zctJ18 J:160-203                ----------------------------------------- Pfam domains (8)
           Pfam domains (9) ---AhpC-TSA-2zctJ09 J:8-140                                                                                                             -------------------1-cysPrx_C-2zctJ19 J:160-203                ----------------------------------------- Pfam domains (9)
          Pfam domains (10) ---AhpC-TSA-2zctJ10 J:8-140                                                                                                             -------------------1-cysPrx_C-2zctJ20 J:160-203                ----------------------------------------- Pfam domains (10)
         Sec.struct. author ..........eeeee..eeeeehhhhhh...eeeeeee....hhhhhhhhhhhhhhhhhhhhh.eeeeeee..hhhhhhhhhhhhhhhh.......eee...hhhhhhh...----......eeeee.....eeeeee.......hhhhhhhhhhhhhhhhhhh................ee.....hhhhhhhhhhhh..eeee..eeee...hhhhhhhhhhhhhhhhh....hhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE -THIOREDOXIN_2  PDB: J:6-163 UniProt: 6-163                                                                                                                    --------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 2zct J   5 IPLIGERFPEMEVTTDHGVIKLPDHYVSQGKWFVLFSHPADFTPVcTTEFVSFARRYEDFQRLGVDLIGLSVDSVFSHIKWKEWIERHIGVRIPFPIIADPQGTVARRLGLL----ATHTVRGVFIVDARGVIRTMLYYPMELGRLVDEILRIVKALKLGDSLKRAVPADWPNNEIIGEGLIVPPPTTEDQARARMESGQYRSLDWWFCWDTPASRDDVEEARRYLRRAAEKPAKLLYEE 244
                                    14        24        34        44     |  54        64        74        84        94       104       114 |    |124       134       144       154       164       174       184       194       204       214       224       234       244
                                                                        50-CSO                                                           116  121
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 Classification and Annotation

(-) SCOP Domains  (1, 10)

Asymmetric/Biological Unit
(-)
Class: Alpha and beta proteins (a/b) (23833)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 2ZCT)

(-) Pfam Domains  (2, 20)

Asymmetric/Biological Unit
(-)
Clan: Thioredoxin (367)
(-)
Clan: no clan defined [family: 1-cysPrx_C] (19)

(-) Gene Ontology  (8, 8)

Asymmetric/Biological Unit(hide GO term definitions)
Chain A,B,C,D,E,F,G,H,I,J   (TDXH_AERPE | Q9Y9L0)
molecular function
    GO:0016209    antioxidant activity    Inhibition of the reactions brought about by dioxygen (O2) or peroxides. Usually the antioxidant is effective because it can itself be more easily oxidized than the substance protected. The term is often applied to components that can trap free radicals, thereby breaking the chain reaction that normally leads to extensive biological damage.
    GO:0016491    oxidoreductase activity    Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
    GO:0051920    peroxiredoxin activity    Catalysis of the reaction: 2 R'-SH + ROOH = R'-S-S-R' + H2O + ROH.
biological process
    GO:0045454    cell redox homeostasis    Any process that maintains the redox environment of a cell or compartment within a cell.
    GO:0098869    cellular oxidant detoxification    Any process carried out at the cellular level that reduces or removes the toxicity superoxide radicals or hydrogen peroxide.
    GO:0070301    cellular response to hydrogen peroxide    Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a hydrogen peroxide (H2O2) stimulus.
    GO:0055114    oxidation-reduction process    A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
cellular component
    GO:0005737    cytoplasm    All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        TDXH_AERPE | Q9Y9L0: 1x0r 2cv4 2e2g 2e2m 2nvl 3a2v 3a2w 3a2x 3a5w

(-) Related Entries Specified in the PDB File

(no "Related Entries Specified in the PDB File" available for 2ZCT)