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(-) Description

Title :  FUNCTIONAL ANNOTATION OF SALMONELLA ENTERICA YIHS-ENCODED PROTEIN
 
Authors :  T. Itoh, B. Mikami, W. Hashimoto, K. Murata
Date :  24 Oct 07  (Deposition) - 05 Feb 08  (Release) - 24 Feb 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.60
Chains :  Asym./Biol. Unit :  A,B,C,D,E,F
Keywords :  N-Acyl-D-Glucosamine 2-Epimerase Protein Family, Isomerase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  T. Itoh, B. Mikami, W. Hashimoto, K. Murata
Crystal Structure Of Yihs In Complex With D-Mannose: Structural Annotation Of Escherichia Coli And Salmonella Enterica Yihs-Encoded Proteins To An Aldose-Ketose Isomerase
J. Mol. Biol. V. 377 1443 2008
PubMed-ID: 18328504  |  Reference-DOI: 10.1016/J.JMB.2008.01.090
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - PUTATIVE ISOMERASE
    Chains: A, B, C, D, E, F
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET21B
    Expression System Strain: HMS(174)DE3
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Gene: YIHS
    Mutation: YES
    Organism Scientific: SALMONELLA TYPHIMURIUM
    Organism Taxid: 602
    Synonym: N-ACYL-D-GLUCOSAMINE 2-EPIMERASE FAMILY PROTEIN

 Structural Features

(-) Chains, Units

  123456
Asymmetric/Biological Unit : ABCDEF

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 6)

Asymmetric/Biological Unit (1, 6)
No.NameCountTypeFull Name
1BMA6Ligand/IonBETA-D-MANNOSE

(-) Sites  (6, 6)

Asymmetric Unit (6, 6)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREARG A:55 , TYR A:111 , ASN A:172 , HIS A:176 , ARG A:238 , GLU A:251 , TRP A:316 , TRP A:375 , HIS A:383 , HOH A:502 , HOH A:528 , HOH A:602 , HOH A:729BINDING SITE FOR RESIDUE BMA A 501
2AC2SOFTWAREARG B:55 , TYR B:111 , ASN B:172 , HIS B:176 , ARG B:238 , GLU B:251 , TRP B:316 , TRP B:375 , HIS B:383 , HOH B:503 , HOH B:528 , HOH B:569BINDING SITE FOR RESIDUE BMA B 502
3AC3SOFTWAREARG C:55 , TYR C:111 , ASN C:172 , MET C:175 , HIS C:176 , ARG C:238 , GLU C:251 , TRP C:316 , TRP C:375 , HIS C:383 , HOH C:504 , HOH C:540 , HOH C:696BINDING SITE FOR RESIDUE BMA C 503
4AC4SOFTWAREARG D:55 , TYR D:111 , ASN D:172 , HIS D:176 , ARG D:238 , PHE D:239 , GLU D:251 , TRP D:316 , TRP D:375 , HIS D:383 , HOH D:505 , HOH D:506 , HOH D:613BINDING SITE FOR RESIDUE BMA D 504
5AC5SOFTWAREARG E:55 , TYR E:111 , ASN E:172 , HIS E:176 , ARG E:238 , PHE E:239 , GLU E:251 , TRP E:316 , HIS E:383 , HOH E:507 , HOH E:522 , HOH E:628BINDING SITE FOR RESIDUE BMA E 505
6AC6SOFTWAREARG F:55 , TYR F:111 , ASN F:172 , HIS F:176 , ARG F:238 , GLU F:251 , TRP F:316 , TRP F:375 , HIS F:383 , HOH F:507 , HOH F:524 , HOH F:630BINDING SITE FOR RESIDUE BMA F 506

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2ZBL)

(-) Cis Peptide Bonds  (6, 6)

Asymmetric/Biological Unit
No.Residues
1Ala A:396 -Pro A:397
2Ala B:396 -Pro B:397
3Ala C:396 -Pro C:397
4Ala D:396 -Pro D:397
5Ala E:396 -Pro E:397
6Ala F:396 -Pro F:397

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2ZBL)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 2ZBL)

(-) Exons   (0, 0)

(no "Exon" information available for 2ZBL)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:416
 aligned with SQUS_SALTY | Q8ZKT7 from UniProtKB/Swiss-Prot  Length:413

    Alignment length:417
                                                                                                                                                                                                                                                                                                                                                                                                                                                      413    
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410  |    
           SQUS_SALTY     1 MKWFNTLSHNRWLEQETDRIFNFGKNAVVPTGFGWLGNKGQIKEEMGTHLWITARMLHVYSVAASMGRPGAYDLVDHGIKAMNGALRDKKYGGWYACVNDQGVVDASKQGYQHFFALLGAASAVTTGHPEARKLLDYTIEVIEKYFWSEEEQMCLESWDEAFSQTEDYRGGNANMHAVEAFLIVYDVTHDKKWLDRALRIASVIIHDVARNGDYRVNEHFDSQWNPIRDYNKDNPAHRFRAYGGTPGHWIEWGRLMLHLHAALEARFETPPAWLLEDAKGLFHATIRDAWAPDGADGFVYSVDWDGKPIVRERVRWPIVEAMGTAYALYTLTDDSQYEEWYQKWWDYCIKYLMDYENGSWWQELDADNKVTTKVWDGKQDIYHLLHCLVIPRLPLAPGLAPAVAAGLLDINAK----   -
               SCOP domains d2zbla_ A: Putative NAG isomerase YihS                                                                                                                                                                                                                                                                                                                                                                                            SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....hhhhhhhhhhhhhhhhhhhh..ee..ee.........hhhhheehhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhh.............eee..eeee..eehhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhee....ee..ee..........eehhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhh...hhhhh.....ee........................hhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhh......................eehhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..........ee................hhhhhhhhhhhhh....hhhhhhhh.......-.... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2zbl A   1 MKWFNTLSHNRWLEQETDRIFNFGKNAVVPTGFGWLGNKGQIKEEMGTHLWITARMLHVYSVAASMGRPGAYDLVDHGIKAMNGALRDKKYGGWYACVNDQGVVDASKQGYQHFFALLGAASAVTTGHPEARKLLDYTIEVIEKYFWSEEEQMCLESWDEAFSQTEDYRGGNANMHAVEAFLIVYDVTHDKKWLDRALRIASVIIHDVARNGDYRVNEHFDSQWNPIRDYNKDNPAHRFRAYGGTPGAWIEWGRLMLHLHAALEARFETPPAWLLEDAKGLFHATIRDAWAPDGADGFVYSVDWDGKPIVRERVRWPIVEAMGTAYALYTLTDDSQYEEWYQKWWDYCIKYLMDYENGSWWQELDADNKVTTKVWDGKQDIYHLLHCLVIPRLPLAPGLAPAVAAGLLDINA-HHHH 421
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410 | |   
                                                                                                                                                                                                                                                                                                                                                                                                                                                     412 |   
                                                                                                                                                                                                                                                                                                                                                                                                                                                       418   


Chain B from PDB  Type:PROTEIN  Length:418
 aligned with SQUS_SALTY | Q8ZKT7 from UniProtKB/Swiss-Prot  Length:413

    Alignment length:418
                                                                                                                                                                                                                                                                                                                                                                                                                                                      413     
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410  |     
           SQUS_SALTY     1 MKWFNTLSHNRWLEQETDRIFNFGKNAVVPTGFGWLGNKGQIKEEMGTHLWITARMLHVYSVAASMGRPGAYDLVDHGIKAMNGALRDKKYGGWYACVNDQGVVDASKQGYQHFFALLGAASAVTTGHPEARKLLDYTIEVIEKYFWSEEEQMCLESWDEAFSQTEDYRGGNANMHAVEAFLIVYDVTHDKKWLDRALRIASVIIHDVARNGDYRVNEHFDSQWNPIRDYNKDNPAHRFRAYGGTPGHWIEWGRLMLHLHAALEARFETPPAWLLEDAKGLFHATIRDAWAPDGADGFVYSVDWDGKPIVRERVRWPIVEAMGTAYALYTLTDDSQYEEWYQKWWDYCIKYLMDYENGSWWQELDADNKVTTKVWDGKQDIYHLLHCLVIPRLPLAPGLAPAVAAGLLDINAK-----   -
               SCOP domains d2zblb_ B: Putative NAG isomerase YihS                                                                                                                                                                                                                                                                                                                                                                                             SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....hhhhhhhhhhhhhhhhhhhh..ee..ee.........hhhhheehhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhh.............eee..eeee..eehhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhee....ee..ee..........eehhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhh...hhhhh.....ee........................hhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhh......................eehhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..........ee................hhhhhhhhhhhhh....hhhhhhhh............. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2zbl B   1 MKWFNTLSHNRWLEQETDRIFNFGKNAVVPTGFGWLGNKGQIKEEMGTHLWITARMLHVYSVAASMGRPGAYDLVDHGIKAMNGALRDKKYGGWYACVNDQGVVDASKQGYQHFFALLGAASAVTTGHPEARKLLDYTIEVIEKYFWSEEEQMCLESWDEAFSQTEDYRGGNANMHAVEAFLIVYDVTHDKKWLDRALRIASVIIHDVARNGDYRVNEHFDSQWNPIRDYNKDNPAHRFRAYGGTPGAWIEWGRLMLHLHAALEARFETPPAWLLEDAKGLFHATIRDAWAPDGADGFVYSVDWDGKPIVRERVRWPIVEAMGTAYALYTLTDDSQYEEWYQKWWDYCIKYLMDYENGSWWQELDADNKVTTKVWDGKQDIYHLLHCLVIPRLPLAPGLAPAVAAGLLDINAKHHHHH 421
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410  ||    
                                                                                                                                                                                                                                                                                                                                                                                                                                                      413|    
                                                                                                                                                                                                                                                                                                                                                                                                                                                       417    


Chain C from PDB  Type:PROTEIN  Length:417
 aligned with SQUS_SALTY | Q8ZKT7 from UniProtKB/Swiss-Prot  Length:413

    Alignment length:418
                                                                                                                                                                                                                                                                                                                                                                                                                                                      413     
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410  |     
           SQUS_SALTY     1 MKWFNTLSHNRWLEQETDRIFNFGKNAVVPTGFGWLGNKGQIKEEMGTHLWITARMLHVYSVAASMGRPGAYDLVDHGIKAMNGALRDKKYGGWYACVNDQGVVDASKQGYQHFFALLGAASAVTTGHPEARKLLDYTIEVIEKYFWSEEEQMCLESWDEAFSQTEDYRGGNANMHAVEAFLIVYDVTHDKKWLDRALRIASVIIHDVARNGDYRVNEHFDSQWNPIRDYNKDNPAHRFRAYGGTPGHWIEWGRLMLHLHAALEARFETPPAWLLEDAKGLFHATIRDAWAPDGADGFVYSVDWDGKPIVRERVRWPIVEAMGTAYALYTLTDDSQYEEWYQKWWDYCIKYLMDYENGSWWQELDADNKVTTKVWDGKQDIYHLLHCLVIPRLPLAPGLAPAVAAGLLDINAK-----   -
               SCOP domains d2zblc_ C: Putative NAG isomerase YihS                                                                                                                                                                                                                                                                                                                                                                                             SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....hhhhhhhhhhhhhhhhhhhh..ee..ee.........hhhhheehhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhh............eee..eeee..eehhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhee....ee..ee..........eehhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhh...hhhhh.....ee........................hhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhh......................eehhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..........ee...................hhhhhhhhhh....hhhhhhhhh......-..... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2zbl C   1 MKWFNTLSHNRWLEQETDRIFNFGKNAVVPTGFGWLGNKGQIKEEMGTHLWITARMLHVYSVAASMGRPGAYDLVDHGIKAMNGALRDKKYGGWYACVNDQGVVDASKQGYQHFFALLGAASAVTTGHPEARKLLDYTIEVIEKYFWSEEEQMCLESWDEAFSQTEDYRGGNANMHAVEAFLIVYDVTHDKKWLDRALRIASVIIHDVARNGDYRVNEHFDSQWNPIRDYNKDNPAHRFRAYGGTPGAWIEWGRLMLHLHAALEARFETPPAWLLEDAKGLFHATIRDAWAPDGADGFVYSVDWDGKPIVRERVRWPIVEAMGTAYALYTLTDDSQYEEWYQKWWDYCIKYLMDYENGSWWQELDADNKVTTKVWDGKQDIYHLLHCLVIPRLPLAPGLAPAVAAGLLDINA-HHHHH 421
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410 | |    
                                                                                                                                                                                                                                                                                                                                                                                                                                                     412 |    
                                                                                                                                                                                                                                                                                                                                                                                                                                                       417    


Chain D from PDB  Type:PROTEIN  Length:416
 aligned with SQUS_SALTY | Q8ZKT7 from UniProtKB/Swiss-Prot  Length:413

    Alignment length:417
                                                                                                                                                                                                                                                                                                                                                                                                                                                      413    
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410  |    
           SQUS_SALTY     1 MKWFNTLSHNRWLEQETDRIFNFGKNAVVPTGFGWLGNKGQIKEEMGTHLWITARMLHVYSVAASMGRPGAYDLVDHGIKAMNGALRDKKYGGWYACVNDQGVVDASKQGYQHFFALLGAASAVTTGHPEARKLLDYTIEVIEKYFWSEEEQMCLESWDEAFSQTEDYRGGNANMHAVEAFLIVYDVTHDKKWLDRALRIASVIIHDVARNGDYRVNEHFDSQWNPIRDYNKDNPAHRFRAYGGTPGHWIEWGRLMLHLHAALEARFETPPAWLLEDAKGLFHATIRDAWAPDGADGFVYSVDWDGKPIVRERVRWPIVEAMGTAYALYTLTDDSQYEEWYQKWWDYCIKYLMDYENGSWWQELDADNKVTTKVWDGKQDIYHLLHCLVIPRLPLAPGLAPAVAAGLLDINAK----   -
               SCOP domains d2zbld_ D: Putative NAG isomerase YihS                                                                                                                                                                                                                                                                                                                                                                                            SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....hhhhhhhhhhhhhhhhhhhh..ee..ee.........hhhhheehhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhh.............eee..eeee..eehhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhee....ee..ee..........eehhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhh...hhhhh.....ee........................hhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhh......................eehhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..........ee................hhhhhhhhhhhhh....hhhhhhhh.......-.... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2zbl D   1 MKWFNTLSHNRWLEQETDRIFNFGKNAVVPTGFGWLGNKGQIKEEMGTHLWITARMLHVYSVAASMGRPGAYDLVDHGIKAMNGALRDKKYGGWYACVNDQGVVDASKQGYQHFFALLGAASAVTTGHPEARKLLDYTIEVIEKYFWSEEEQMCLESWDEAFSQTEDYRGGNANMHAVEAFLIVYDVTHDKKWLDRALRIASVIIHDVARNGDYRVNEHFDSQWNPIRDYNKDNPAHRFRAYGGTPGAWIEWGRLMLHLHAALEARFETPPAWLLEDAKGLFHATIRDAWAPDGADGFVYSVDWDGKPIVRERVRWPIVEAMGTAYALYTLTDDSQYEEWYQKWWDYCIKYLMDYENGSWWQELDADNKVTTKVWDGKQDIYHLLHCLVIPRLPLAPGLAPAVAAGLLDINA-HHHH 421
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410 | |   
                                                                                                                                                                                                                                                                                                                                                                                                                                                     412 |   
                                                                                                                                                                                                                                                                                                                                                                                                                                                       418   


Chain E from PDB  Type:PROTEIN  Length:416
 aligned with SQUS_SALTY | Q8ZKT7 from UniProtKB/Swiss-Prot  Length:413

    Alignment length:417
                                                                                                                                                                                                                                                                                                                                                                                                                                                      413    
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410  |    
           SQUS_SALTY     1 MKWFNTLSHNRWLEQETDRIFNFGKNAVVPTGFGWLGNKGQIKEEMGTHLWITARMLHVYSVAASMGRPGAYDLVDHGIKAMNGALRDKKYGGWYACVNDQGVVDASKQGYQHFFALLGAASAVTTGHPEARKLLDYTIEVIEKYFWSEEEQMCLESWDEAFSQTEDYRGGNANMHAVEAFLIVYDVTHDKKWLDRALRIASVIIHDVARNGDYRVNEHFDSQWNPIRDYNKDNPAHRFRAYGGTPGHWIEWGRLMLHLHAALEARFETPPAWLLEDAKGLFHATIRDAWAPDGADGFVYSVDWDGKPIVRERVRWPIVEAMGTAYALYTLTDDSQYEEWYQKWWDYCIKYLMDYENGSWWQELDADNKVTTKVWDGKQDIYHLLHCLVIPRLPLAPGLAPAVAAGLLDINAK----   -
               SCOP domains d2zble_ E: Putative NAG isomerase YihS                                                                                                                                                                                                                                                                                                                                                                                            SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....hhhhhhhhhhhhhhhhhhhh..ee..ee.........hhhhheehhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhh.............eee..eeee..eehhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhee....ee..ee..........eehhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhh...hhhhh.....ee........................hhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhh......................eehhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..........ee...................hhhhhhhhhh....hhhhhhhh.......-.... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2zbl E   1 MKWFNTLSHNRWLEQETDRIFNFGKNAVVPTGFGWLGNKGQIKEEMGTHLWITARMLHVYSVAASMGRPGAYDLVDHGIKAMNGALRDKKYGGWYACVNDQGVVDASKQGYQHFFALLGAASAVTTGHPEARKLLDYTIEVIEKYFWSEEEQMCLESWDEAFSQTEDYRGGNANMHAVEAFLIVYDVTHDKKWLDRALRIASVIIHDVARNGDYRVNEHFDSQWNPIRDYNKDNPAHRFRAYGGTPGAWIEWGRLMLHLHAALEARFETPPAWLLEDAKGLFHATIRDAWAPDGADGFVYSVDWDGKPIVRERVRWPIVEAMGTAYALYTLTDDSQYEEWYQKWWDYCIKYLMDYENGSWWQELDADNKVTTKVWDGKQDIYHLLHCLVIPRLPLAPGLAPAVAAGLLDINA-HHHH 421
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410 | |   
                                                                                                                                                                                                                                                                                                                                                                                                                                                     412 |   
                                                                                                                                                                                                                                                                                                                                                                                                                                                       418   


Chain F from PDB  Type:PROTEIN  Length:416
 aligned with SQUS_SALTY | Q8ZKT7 from UniProtKB/Swiss-Prot  Length:413

    Alignment length:417
                                                                                                                                                                                                                                                                                                                                                                                                                                                      413    
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410  |    
           SQUS_SALTY     1 MKWFNTLSHNRWLEQETDRIFNFGKNAVVPTGFGWLGNKGQIKEEMGTHLWITARMLHVYSVAASMGRPGAYDLVDHGIKAMNGALRDKKYGGWYACVNDQGVVDASKQGYQHFFALLGAASAVTTGHPEARKLLDYTIEVIEKYFWSEEEQMCLESWDEAFSQTEDYRGGNANMHAVEAFLIVYDVTHDKKWLDRALRIASVIIHDVARNGDYRVNEHFDSQWNPIRDYNKDNPAHRFRAYGGTPGHWIEWGRLMLHLHAALEARFETPPAWLLEDAKGLFHATIRDAWAPDGADGFVYSVDWDGKPIVRERVRWPIVEAMGTAYALYTLTDDSQYEEWYQKWWDYCIKYLMDYENGSWWQELDADNKVTTKVWDGKQDIYHLLHCLVIPRLPLAPGLAPAVAAGLLDINAK----   -
               SCOP domains d2zblf_ F: Putative NAG isomerase YihS                                                                                                                                                                                                                                                                                                                                                                                            SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....hhhhhhhhhhhhhhhhhhhh..ee..ee.........hhhhheehhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhh.............eee..eeee..eehhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhee....ee..ee..........eehhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhh...hhhhh.....ee........................hhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhh......................eehhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhh..........ee................hhhhhhhhhhhhh....hhhhhhhhh......-.... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2zbl F   1 MKWFNTLSHNRWLEQETDRIFNFGKNAVVPTGFGWLGNKGQIKEEMGTHLWITARMLHVYSVAASMGRPGAYDLVDHGIKAMNGALRDKKYGGWYACVNDQGVVDASKQGYQHFFALLGAASAVTTGHPEARKLLDYTIEVIEKYFWSEEEQMCLESWDEAFSQTEDYRGGNANMHAVEAFLIVYDVTHDKKWLDRALRIASVIIHDVARNGDYRVNEHFDSQWNPIRDYNKDNPAHRFRAYGGTPGAWIEWGRLMLHLHAALEARFETPPAWLLEDAKGLFHATIRDAWAPDGADGFVYSVDWDGKPIVRERVRWPIVEAMGTAYALYTLTDDSQYEEWYQKWWDYCIKYLMDYENGSWWQELDADNKVTTKVWDGKQDIYHLLHCLVIPRLPLAPGLAPAVAAGLLDINA-HHHH 421
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410 | |   
                                                                                                                                                                                                                                                                                                                                                                                                                                                     412 |   
                                                                                                                                                                                                                                                                                                                                                                                                                                                       418
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 6)

Asymmetric/Biological Unit
(-)
Class: All alpha proteins (14657)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 2ZBL)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 2ZBL)

(-) Gene Ontology  (6, 6)

Asymmetric/Biological Unit(hide GO term definitions)
Chain A,B,C,D,E,F   (SQUS_SALTY | Q8ZKT7)
molecular function
    GO:0050121    N-acylglucosamine 2-epimerase activity    Catalysis of the reaction: N-acyl-D-glucosamine = N-acyl-D-mannosamine.
    GO:0003824    catalytic activity    Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
    GO:0016853    isomerase activity    Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5.
    GO:0061593    sulfoquinovose isomerase activity    Catalysis of the reaction sulfoquinovose = 6-deoxy-6-sulfofructose.
biological process
    GO:1902777    6-sulfoquinovose(1-) catabolic process    The chemical reactions and pathways resulting in the breakdown of 6-sulfoquinovose(1-).
    GO:0006044    N-acetylglucosamine metabolic process    The chemical reactions and pathways involving N-acetylglucosamine. The D isomer is a common structural unit of glycoproteins in plants, bacteria and animals; it is often the terminal sugar of an oligosaccharide group of a glycoprotein.

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        SQUS_SALTY | Q8ZKT7: 2afa

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