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(-) Description

Title :  BCEC AND THE FINAL STEP OF UGDS REACTION
 
Authors :  J. Rocha, A. O. Popescu, P. Borges, D. Mil-Homens, I. Sa-Correia, A. M. F C. Frazao
Date :  02 Dec 10  (Deposition) - 27 Jul 11  (Release) - 27 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.75
Chains :  Asym. Unit :  A,B,C,D
Biol. Unit 1:  C,D  (1x)
Biol. Unit 2:  A,B  (1x)
Keywords :  Oxidoreductase, Carbohydrate Synthesis, Exopolysaccharide, Cystic Fibrosis (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  J. Rocha, A. O. Popescu, P. Borges, D. Mil-Homens, L. M. Moreira, I. Sa-Correia, A. M. Fialho, C. Frazao
Structure Of Burkholderia Cepacia Udp-Glucose Dehydrogenase (Ugd) Bcec And Role Of Tyr10 In Final Hydrolysis Of Ugd Thioester Intermediate.
J. Bacteriol. V. 193 3978 2011
PubMed-ID: 21602353  |  Reference-DOI: 10.1128/JB.01076-10
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - UDP-GLUCOSE DEHYDROGENASE
    Chains: A, B, C, D
    EC Number: 1.1.1.22
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PBCEC
    Expression System Strain: SURE
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Organism Scientific: BURKHOLDERIA CEPACIA
    Organism Taxid: 292
    Strain: IST 408
    Synonym: BCEC

 Structural Features

(-) Chains, Units

  1234
Asymmetric Unit : ABCD
Biological Unit 1 (1x):   CD
Biological Unit 2 (1x): AB  

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (4, 28)

Asymmetric Unit (4, 28)
No.NameCountTypeFull Name
1ACT4Ligand/IonACETATE ION
2GOL6Ligand/IonGLYCEROL
3SO414Ligand/IonSULFATE ION
4UGA4Ligand/IonURIDINE-5'-DIPHOSPHATE-GLUCURONIC ACID
Biological Unit 1 (4, 13)
No.NameCountTypeFull Name
1ACT2Ligand/IonACETATE ION
2GOL3Ligand/IonGLYCEROL
3SO46Ligand/IonSULFATE ION
4UGA2Ligand/IonURIDINE-5'-DIPHOSPHATE-GLUCURONIC ACID
Biological Unit 2 (4, 15)
No.NameCountTypeFull Name
1ACT2Ligand/IonACETATE ION
2GOL3Ligand/IonGLYCEROL
3SO48Ligand/IonSULFATE ION
4UGA2Ligand/IonURIDINE-5'-DIPHOSPHATE-GLUCURONIC ACID

(-) Sites  (28, 28)

Asymmetric Unit (28, 28)
No.NameEvidenceResiduesDescription
01AC1SOFTWARETYR A:10 , GLU A:154 , PHE A:155 , LEU A:156 , GLU A:158 , LYS A:214 , ASN A:218 , ILE A:225 , PHE A:259 , LEU A:260 , TYR A:261 , GLY A:265 , TYR A:266 , GLY A:267 , CYS A:270 , PHE A:271 , PHE A:330 , LYS A:331 , ARG A:431 , HOH A:2013 , HOH A:2141 , HOH A:2167 , HOH A:2218 , HOH A:2297 , HOH A:2340 , HOH A:2341 , HOH A:2370 , HOH A:2371 , HOH A:2372 , HOH A:2373 , ARG B:254BINDING SITE FOR RESIDUE UGA A 501
02AC2SOFTWAREARG A:338 , ARG A:343 , HOH A:2374 , HOH A:2375BINDING SITE FOR RESIDUE SO4 A1460
03AC3SOFTWAREARG A:246 , ARG A:247 , HOH A:2376 , HIS C:199BINDING SITE FOR RESIDUE SO4 A1461
04AC4SOFTWAREARG A:185 , LYS A:189 , TYR A:204 , ARG D:185 , GLU D:186 , LYS D:189BINDING SITE FOR RESIDUE SO4 A1462
05AC5SOFTWAREPHE A:165 , PRO A:168 , ILE A:171 , PHE A:195 , HOH A:2182 , HOH A:2377BINDING SITE FOR RESIDUE ACT A1463
06AC6SOFTWAREPHE A:113 , MET A:146 , ARG A:183 , HOH A:2157BINDING SITE FOR RESIDUE GOL A1464
07AC7SOFTWAREARG A:208 , HIS A:285 , HOH A:2146 , HOH A:2378BINDING SITE FOR RESIDUE GOL A1465
08AC8SOFTWARETYR A:257 , HIS A:258 , PHE A:259 , TYR A:261 , HOH A:2379 , HOH A:2380BINDING SITE FOR RESIDUE GOL A1466
09AC9SOFTWAREARG A:254 , TYR B:10 , GLU B:154 , PHE B:155 , LEU B:156 , GLU B:158 , LYS B:214 , ASN B:218 , ILE B:225 , PHE B:259 , LEU B:260 , TYR B:261 , GLY B:265 , TYR B:266 , GLY B:267 , CYS B:270 , PHE B:271 , PHE B:330 , LYS B:331 , ARG B:431 , HOH B:2146 , HOH B:2232 , HOH B:2285 , HOH B:2316 , HOH B:2317 , HOH B:2318 , HOH B:2319 , HOH B:2320 , HOH B:2321 , HOH B:2322 , HOH B:2323 , HOH B:2324 , HOH B:2325BINDING SITE FOR RESIDUE UGA B 501
10BC1SOFTWAREARG B:355 , HOH B:2245 , HIS C:378 , PRO C:379 , SER C:380BINDING SITE FOR RESIDUE SO4 B1458
11BC2SOFTWAREHIS B:258 , TYR B:261 , HOH B:2326 , HOH B:2327 , ASN D:198BINDING SITE FOR RESIDUE SO4 B1459
12BC3SOFTWAREARG B:304 , GLU B:348 , ARG B:352BINDING SITE FOR RESIDUE SO4 B1460
13BC4SOFTWAREARG B:185 , GLU B:186 , LYS B:189 , ARG C:185 , LYS C:189BINDING SITE FOR RESIDUE SO4 B1461
14BC5SOFTWAREARG B:343 , HOH B:2328 , HOH B:2329BINDING SITE FOR RESIDUE SO4 B1462
15BC6SOFTWAREPHE B:165 , PRO B:168 , ILE B:171 , PHE B:195 , HOH B:2124 , HOH B:2330BINDING SITE FOR RESIDUE ACT B1463
16BC7SOFTWAREGLU C:154 , PHE C:155 , LEU C:156 , LYS C:214 , ASN C:218 , ILE C:225 , PHE C:259 , LEU C:260 , TYR C:261 , TYR C:266 , GLY C:267 , CYS C:270 , PHE C:271 , PHE C:330 , LYS C:331 , ARG C:431 , HOH C:2072 , HOH C:2111 , HOH C:2142 , HOH C:2188 , HOH C:2252 , HOH C:2253 , HOH C:2279 , HOH C:2280 , HOH C:2281 , HOH C:2282 , HOH C:2283 , HOH C:2284 , ARG D:254BINDING SITE FOR RESIDUE UGA C 501
17BC8SOFTWAREHIS A:199 , ARG C:246 , ARG C:247 , HOH C:2285BINDING SITE FOR RESIDUE SO4 C1458
18BC9SOFTWAREARG C:338 , ARG C:343 , HOH C:2286BINDING SITE FOR RESIDUE SO4 C1459
19CC1SOFTWAREGLY C:112 , PHE C:113 , ARG C:183BINDING SITE FOR RESIDUE SO4 C1460
20CC2SOFTWAREPHE C:165 , PRO C:168 , ILE C:171 , PHE C:195 , HOH C:2083 , HOH C:2287BINDING SITE FOR RESIDUE ACT C1461
21CC3SOFTWARETYR C:257 , HIS C:258 , PHE C:259 , TYR C:261 , HOH C:2288BINDING SITE FOR RESIDUE GOL C1462
22CC4SOFTWAREGLU C:406 , HOH C:2265 , HOH C:2289BINDING SITE FOR RESIDUE GOL C1463
23CC5SOFTWAREARG C:254 , GLU D:154 , PHE D:155 , LEU D:156 , GLU D:158 , LYS D:214 , ASN D:218 , ILE D:225 , PHE D:259 , LEU D:260 , TYR D:261 , GLY D:265 , TYR D:266 , GLY D:267 , CYS D:270 , PHE D:271 , PHE D:330 , LYS D:331 , ARG D:431 , HOH D:2147 , HOH D:2203 , HOH D:2229 , HOH D:2278 , HOH D:2327 , HOH D:2328 , HOH D:2363 , HOH D:2364 , HOH D:2365 , HOH D:2366 , HOH D:2367 , HOH D:2368 , HOH D:2369BINDING SITE FOR RESIDUE UGA D 501
24CC6SOFTWAREASN B:198 , HIS D:258 , TYR D:261 , HOH D:2370 , HOH D:2371BINDING SITE FOR RESIDUE SO4 D1459
25CC7SOFTWAREARG D:343 , HOH D:2372 , HOH D:2373BINDING SITE FOR RESIDUE SO4 D1460
26CC8SOFTWARELYS A:140 , GLY D:443 , ARG D:455 , GLN D:456BINDING SITE FOR RESIDUE SO4 D1461
27CC9SOFTWAREPHE D:165 , PRO D:168 , PHE D:195 , HOH D:2374BINDING SITE FOR RESIDUE ACT D1462
28DC1SOFTWAREGLY D:112 , PHE D:113 , ARG D:183BINDING SITE FOR RESIDUE GOL D1463

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2Y0E)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 2Y0E)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2Y0E)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 2Y0E)

(-) Exons   (0, 0)

(no "Exon" information available for 2Y0E)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:461
 aligned with C9E261_BURCE | C9E261 from UniProtKB/TrEMBL  Length:470

    Alignment length:461
                              1                                                                                                                                                                                                                                                                                                                                                                                                                                                                          
                              |      8        18        28        38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448       458 
         C9E261_BURCE     - --MNLTIIGSGYVGLVTGACLADIGHDVFCLDVDQAKIDILNNGGVPIHEPGLKEVIARNRSAGRLRFSTDIEAAVAHGDVQFIAVGTPPDEDGSADLQYVLAAARNIGRYMTGFKVIVDKSTVPVGTAERVRAAVAEELAKRGGDQMFSVVSNPEFLKEGAAVDDFTRPDRIVIGCDDDVPGERARELMKKLYAPFNRNHERTLYMDVRSAEFTKYAANAMLATRISFMNELANLADRFGADIEAVRRGIGSDPRIGYHFLYAGCGYGGSCFPKDVEALIRTADEHGQSLQILKAVSSVNATQKRVLADKIVARFGEDLTGRTFAIWGLAFKPNTDDMREAPSRELIAELLSRGARIAAYDPVAQEEARRVIALDLADHPSWLERLSFVDDEAQAARDADALVIVTEWKIFKSPDFVALGRLWKTPVIFDGRNLYEPETMSEQGIEYHPIGRPGSRQAVA 459
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeee..hhhhhhhhhhhhhh..eeeee..hhhhhhhhh.........hhhhhhhhhhhh..eeee.hhhhhhhhh.eeee.............hhhhhhhhhhhhhhh...eeeee......hhhhhhhhhhhhhhhhh.....eeeee........hhhhhhhh...eeee...hhhhhhhhhhhhhhhhhhhh....eeeehhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhh..................hhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhh......eeeee.............hhhhhhhhhhhhh..eeeee...hhhhhhhhhhhhh..hhhhhh.eee..hhhhhh....eeee...hhhhhh.hhhhhhh.....eeee.....hhhhhhhh..eee......hhhhhh Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2y0e A  -2 GSMNLTIIGSGYVGLVTGACLADIGHDVFCLDVDQAKIDILNNGGVPIHEPGLKEVIARNRSAGRLRFSTDIEAAVAHGDVQFIAVGTPPDEDGSADLQYVLAAARNIGRYMTGFKVIVDKSTVPVGTAERVRAAVAEELAKRGGDQMFSVVSNPEFLKEGAAVDDFTRPDRIVIGCDDDVPGERARELMKKLYAPFNRNHERTLYMDVRSAEFTKYAANAMLATRISFMNELANLADRFGADIEAVRRGIGSDPRIGYHFLYAGCGYGGSCFPKDVEALIRTADEHGQSLQILKAVSSVNATQKRVLADKIVARFGEDLTGRTFAIWGLAFKPNTDDMREAPSRELIAELLSRGARIAAYDPVAQEEARRVIALDLADHPSWLERLSFVDDEAQAARDADALVIVTEWKIFKSPDFVALGRLWKTPVIFDGRNLYEPETMSEQGIEYHPIGRPGSRQAVA 459
                             ||      8        18        28        38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448       458 
                             ||                                                                                                                                                                                                                                                                                                                                                                                                                                                                          
                            -1|                                                                                                                                                                                                                                                                                                                                                                                                                                                                          
                              1                                                                                                                                                                                                                                                                                                                                                                                                                                                                          


Chain B from PDB  Type:PROTEIN  Length:451
 aligned with C9E261_BURCE | C9E261 from UniProtKB/TrEMBL  Length:470

    Alignment length:459
                              1                                                                                                                                                                                                                                                                                                                                                                                                                                                                        
                              |      8        18        28        38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448         
         C9E261_BURCE     - --MNLTIIGSGYVGLVTGACLADIGHDVFCLDVDQAKIDILNNGGVPIHEPGLKEVIARNRSAGRLRFSTDIEAAVAHGDVQFIAVGTPPDEDGSADLQYVLAAARNIGRYMTGFKVIVDKSTVPVGTAERVRAAVAEELAKRGGDQMFSVVSNPEFLKEGAAVDDFTRPDRIVIGCDDDVPGERARELMKKLYAPFNRNHERTLYMDVRSAEFTKYAANAMLATRISFMNELANLADRFGADIEAVRRGIGSDPRIGYHFLYAGCGYGGSCFPKDVEALIRTADEHGQSLQILKAVSSVNATQKRVLADKIVARFGEDLTGRTFAIWGLAFKPNTDDMREAPSRELIAELLSRGARIAAYDPVAQEEARRVIALDLADHPSWLERLSFVDDEAQAARDADALVIVTEWKIFKSPDFVALGRLWKTPVIFDGRNLYEPETMSEQGIEYHPIGRPGSRQA 457
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeee..hhhhhhhhhhhhhh..eeeee..hhhhhhhhhh........hhhhhhhhhhhh..eeee.hhhhhhhhh.eeee......-----..hhhhhhhhhhhhhhh...eeeee......hhhhhhhhhhhhhhhhh---..eeeee........hhhhhhhh...eeee...hhhhhhhhhhhhhhhhhhh.....eeeehhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhh..................hhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhh......eeeee.............hhhhhhhhhhhhh..eeeee...hhhhhhhhhhhhh..hhhhhh.eee..hhhhhh....eeee...hhhhh..hhhhhhh.....eeee.....hhhhhhhh..eeee......... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2y0e B  -2 GSMNLTIIGSGYVGLVTGACLADIGHDVFCLDVDQAKIDILNNGGVPIHEPGLKEVIARNRSAGRLRFSTDIEAAVAHGDVQFIAVGTPP-----ADLQYVLAAARNIGRYMTGFKVIVDKSTVPVGTAERVRAAVAEELAKR---QMFSVVSNPEFLKEGAAVDDFTRPDRIVIGCDDDVPGERARELMKKLYAPFNRNHERTLYMDVRSAEFTKYAANAMLATRISFMNELANLADRFGADIEAVRRGIGSDPRIGYHFLYAGCGYGGSCFPKDVEALIRTADEHGQSLQILKAVSSVNATQKRVLADKIVARFGEDLTGRTFAIWGLAFKPNTDDMREAPSRELIAELLSRGARIAAYDPVAQEEARRVIALDLADHPSWLERLSFVDDEAQAARDADALVIVTEWKIFKSPDFVALGRLWKTPVIFDGRNLYEPETMSEQGIEYHPIGRPGSRQA 457
                             ||      8        18        28        38        48        58        68        78        88     |  98       108       118       128       138  |   |148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448         
                            -1|                                                                                     88    94                                            141 145                                                                                                                                                                                                                                                                                                                        
                              1                                                                                                                                                                                                                                                                                                                                                                                                                                                                        


Chain C from PDB  Type:PROTEIN  Length:455
 aligned with C9E261_BURCE | C9E261 from UniProtKB/TrEMBL  Length:470

    Alignment length:459
                              1                                                                                                                                                                                                                                                                                                                                                                                                                                                                        
                              |      8        18        28        38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448         
         C9E261_BURCE     - --MNLTIIGSGYVGLVTGACLADIGHDVFCLDVDQAKIDILNNGGVPIHEPGLKEVIARNRSAGRLRFSTDIEAAVAHGDVQFIAVGTPPDEDGSADLQYVLAAARNIGRYMTGFKVIVDKSTVPVGTAERVRAAVAEELAKRGGDQMFSVVSNPEFLKEGAAVDDFTRPDRIVIGCDDDVPGERARELMKKLYAPFNRNHERTLYMDVRSAEFTKYAANAMLATRISFMNELANLADRFGADIEAVRRGIGSDPRIGYHFLYAGCGYGGSCFPKDVEALIRTADEHGQSLQILKAVSSVNATQKRVLADKIVARFGEDLTGRTFAIWGLAFKPNTDDMREAPSRELIAELLSRGARIAAYDPVAQEEARRVIALDLADHPSWLERLSFVDDEAQAARDADALVIVTEWKIFKSPDFVALGRLWKTPVIFDGRNLYEPETMSEQGIEYHPIGRPGSRQA 457
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeee..hhhhhhhhhhhhhh..eeeee..hhhhhhhhhh........hhhhhhhhhhhh..eeee.hhhhhhhhh.eeee.............hhhhhhhhhhhhhhh...eeeee......hhhhhhhhhhhhhhhhh----.eeeee........hhhhhhhh...eeee...hhhhhhhhhhhhhhhhhhhh....eeeehhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhh..................hhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhh......eeeee.............hhhhhhhhhhhhh..eeeee...hhhhhhhhhhhhh..hhhhhh.eee...hhhhhh...eeee...hhhhhh.hhhhhhh.....eeee.....hhhhhhhh..eee.......... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2y0e C  -2 GSMNLTIIGSGYVGLVTGACLADIGHDVFCLDVDQAKIDILNNGGVPIHEPGLKEVIARNRSAGRLRFSTDIEAAVAHGDVQFIAVGTPPDEDGSADLQYVLAAARNIGRYMTGFKVIVDKSTVPVGTAERVRAAVAEELAKR----MFSVVSNPEFLKEGAAVDDFTRPDRIVIGCDDDVPGERARELMKKLYAPFNRNHERTLYMDVRSAEFTKYAANAMLATRISFMNELANLADRFGADIEAVRRGIGSDPRIGYHFLYAGCGYGGSCFPKDVEALIRTADEHGQSLQILKAVSSVNATQKRVLADKIVARFGEDLTGRTFAIWGLAFKPNTDDMREAPSRELIAELLSRGARIAAYDPVAQEEARRVIALDLADHPSWLERLSFVDDEAQAARDADALVIVTEWKIFKSPDFVALGRLWKTPVIFDGRNLYEPETMSEQGIEYHPIGRPGSRQA 457
                             ||      8        18        28        38        48        58        68        78        88        98       108       118       128       138  |    148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448         
                            -1|                                                                                                                                         141  146                                                                                                                                                                                                                                                                                                                       
                              1                                                                                                                                                                                                                                                                                                                                                                                                                                                                        


Chain D from PDB  Type:PROTEIN  Length:454
 aligned with C9E261_BURCE | C9E261 from UniProtKB/TrEMBL  Length:470

    Alignment length:460
                              1                                                                                                                                                                                                                                                                                                                                                                                                                                                                         
                              |      8        18        28        38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448       458
         C9E261_BURCE     - --MNLTIIGSGYVGLVTGACLADIGHDVFCLDVDQAKIDILNNGGVPIHEPGLKEVIARNRSAGRLRFSTDIEAAVAHGDVQFIAVGTPPDEDGSADLQYVLAAARNIGRYMTGFKVIVDKSTVPVGTAERVRAAVAEELAKRGGDQMFSVVSNPEFLKEGAAVDDFTRPDRIVIGCDDDVPGERARELMKKLYAPFNRNHERTLYMDVRSAEFTKYAANAMLATRISFMNELANLADRFGADIEAVRRGIGSDPRIGYHFLYAGCGYGGSCFPKDVEALIRTADEHGQSLQILKAVSSVNATQKRVLADKIVARFGEDLTGRTFAIWGLAFKPNTDDMREAPSRELIAELLSRGARIAAYDPVAQEEARRVIALDLADHPSWLERLSFVDDEAQAARDADALVIVTEWKIFKSPDFVALGRLWKTPVIFDGRNLYEPETMSEQGIEYHPIGRPGSRQAV 458
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeee..hhhhhhhhhhhhhh..eeeee..hhhhhhhhhh........hhhhhhhhhhhh..eeee.hhhhhhhhh.eeee......------.hhhhhhhhhhhhhhh...eeeee......hhhhhhhhhhhhhhhhhh....eeeee........hhhhhhhh...eeee...hhhhhhhhhhhhhhhhhhh.....eeeehhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhh..................hhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhh......eeeee.............hhhhhhhhhhhhh..eeeee...hhhhhhhhhhhhh..hhhhhh.eee...hhhhhh...eeee...hhhhh..hhhhhhh.....eeee.....hhhhhhhh..eee........... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2y0e D  -2 GSMNLTIIGSGYVGLVTGACLADIGHDVFCLDVDQAKIDILNNGGVPIHEPGLKEVIARNRSAGRLRFSTDIEAAVAHGDVQFIAVGTPP------DLQYVLAAARNIGRYMTGFKVIVDKSTVPVGTAERVRAAVAEELAKRGGDQMFSVVSNPEFLKEGAAVDDFTRPDRIVIGCDDDVPGERARELMKKLYAPFNRNHERTLYMDVRSAEFTKYAANAMLATRISFMNELANLADRFGADIEAVRRGIGSDPRIGYHFLYAGCGYGGSCFPKDVEALIRTADEHGQSLQILKAVSSVNATQKRVLADKIVARFGEDLTGRTFAIWGLAFKPNTDDMREAPSRELIAELLSRGARIAAYDPVAQEEARRVIALDLADHPSWLERLSFVDDEAQAARDADALVIVTEWKIFKSPDFVALGRLWKTPVIFDGRNLYEPETMSEQGIEYHPIGRPGSRQAV 458
                             ||      8        18        28        38        48        58        68        78        88      | 98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448       458
                            -1|                                                                                     88     95                                                                                                                                                                                                                                                                                                                                                                           
                              1
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 2Y0E)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 2Y0E)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 2Y0E)

(-) Gene Ontology  (5, 5)

Asymmetric Unit(hide GO term definitions)
Chain A,B,C,D   (C9E261_BURCE | C9E261)
molecular function
    GO:0051287    NAD binding    Interacting selectively and non-covalently with nicotinamide adenine dinucleotide, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NAD+, or the reduced form, NADH.
    GO:0003979    UDP-glucose 6-dehydrogenase activity    Catalysis of the reaction: H(2)O + 2 NAD(+) + UDP-alpha-D-glucose = 3 H(+) + 2 NADH + UDP-alpha-D-glucuronate.
    GO:0016616    oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor    Catalysis of an oxidation-reduction (redox) reaction in which a CH-OH group acts as a hydrogen or electron donor and reduces NAD+ or NADP.
biological process
    GO:0055114    oxidation-reduction process    A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
    GO:0000271    polysaccharide biosynthetic process    The chemical reactions and pathways resulting in the formation of a polysaccharide, a polymer of many (typically more than 10) monosaccharide residues linked glycosidically.

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/TrEMBL
        C9E261_BURCE | C9E261: 2y0c 2y0d

(-) Related Entries Specified in the PDB File

2y0c BCEC MUTATION Y10S
2y0d BCEC MUTATION Y10K