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(-) Description

Title :  CRYSTAL STRUCTURE OF THE STREPTOCOCCUS PYOGENES FIBRONECTIN BINDING PROTEIN FBAB-B
 
Authors :  M. Oke, L. G. Carter, K. A. Johnson, H. Liu, S. A. Mcmahon, M. F. White, J. H
Date :  10 Feb 10  (Deposition) - 01 Sep 10  (Release) - 10 Aug 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.60
Chains :  Asym./Biol. Unit :  A
Keywords :  Protein Binding (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  M. Oke, L. G. Carter, K. A. Johnson, H. Liu, S. A. Mcmahon, X. Yan, M. Kerou, N. D. Weikart, N. Kadi, M. A. Sheikh, S. Schmelz, M. Dorward, M. Zawadzki, C. Cozens, H. Falconer, H. Powers, I. M. Overton, C. A. J. Van Niekerk, X. Peng, P. Patel, R. A. Garrett, D. Prangishvili C. H. Botting, P. J. Coote, D. T. F. Dryden, G. J. Barton, U. Schwarz-Linek, G. L. Challis, G. L. Taylor, M. F. White, J. H. Naismith
The Scottish Structural Proteomics Facility: Targets, Methods And Outputs.
J. Struct. Funct. Genomics V. 11 167 2010
PubMed-ID: 20419351  |  Reference-DOI: 10.1007/S10969-010-9090-Y

(-) Compounds

Molecule 1 - FIBRONECTIN BINDING PROTEIN
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PDEST14
    Expression System Strain: C43(DE3)
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Fragment: B DOMAIN, RESIDUES 440-557
    Organism Scientific: STREPTOCOCCUS PYOGENES
    Organism Taxid: 1314
    Other Details: ISO-PEPTIDE BOND BETWEEN SIDECHAINS OF LYS31 AND ASP117
    Synonym: FBA2

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 2X5P)

(-) Sites  (0, 0)

(no "Site" information available for 2X5P)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2X5P)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 2X5P)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2X5P)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 2X5P)

(-) Exons   (0, 0)

(no "Exon" information available for 2X5P)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
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SAPs(SNPs) PROSITE motifs Exons
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Chain A from PDB  Type:PROTEIN  Length:104
 aligned with Q8G9G1_STRPY | Q8G9G1 from UniProtKB/TrEMBL  Length:733

    Alignment length:141
                                   426       436       446       456       466       476       486       496       506       516       526       536       546       556 
         Q8G9G1_STRPY   417 NTMPGEEDGTNSNKYEEVEDSRPVDTLSGLSSEQGQSGDMTIEEDSATHIKFSKRDIDGKELAGATMELRDSSGKTISTWISDGQVKDFYLMPGKYTFVETAAPDGYEVATAITFTVNEQGQVTVNGKATKGDAHIVMVDA 557
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---                    Fn_b                 ind-2x5pA02 A:1-3Cna_B-2x5pA01 A:39-103                                           --------------- Pfam domains
         Sec.struct. author ...--------------------....-----------------...eeeeeeee..........eeeee.....eeeeee.....eeeee..eeeeeeeee..........eeeee.....eee..eee....eeeee.. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2x5p A  -2 GAM--------------------VDTL-----------------DSATHIKFSKRDIDGKELAGATMELRDSSGKTISTWISDGQVKDFYLMPGKYTFVETAAPDGYEVATAITFTVNEQGQVTVNGKATKGDAHIVMVDA 118
                              |      -         -   |  |  -         -    |   27        37        47        57        67        77        87        97       107       117 
                              0                    1  4                22
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 2X5P)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 2X5P)

(-) Pfam Domains  (2, 2)

Asymmetric/Biological Unit
(-)
Clan: Transthyretin (88)
(-)
Clan: no clan defined [family: Fn_bind] (2)

(-) Gene Ontology  (0, 0)

Asymmetric/Biological Unit(hide GO term definitions)
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/TrEMBL
        Q8G9G1_STRPY | Q8G9G1: 4mli 4mls

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