2R6H - JenaLib

Asymmetric Unit (Jmol Viewer)

Biological Unit 1 (Jmol Viewer)

Biological Unit 2 (Jmol Viewer)

Biological Unit 3 (Jmol Viewer)

Biological Unit 4 (Jmol Viewer)

Title :   CRYSTAL STRUCTURE OF THE DOMAIN COMPRISING THE NAD BINDING AND THE FAD BINDING REGIONS OF THE NADH:UBIQUINONE OXIDOREDUCTASE, NA TRANSLOCATING, F SUBUNIT FROM PORPHYROMONAS GINGIVALIS

Authors :   Y. Kim, R. Mulligan, S. Moy, A. Joachimiak, Midwest Center For Struc Genomics (Mcsg)

Date :   05 Sep 07 (Deposition) - 11 Sep 07 (Release) - 13 Jul 11 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   2.95

Chains :   Asym. Unit : A,B,C,D
Biol. Unit 1: A  (1x)
Biol. Unit 2: B  (1x)
Biol. Unit 3: C  (1x)
Biol. Unit 4: D  (1x)

Keywords :   Alpha-Beta-Alpha Sandwich, Structural Genomics, Psi-2, Protein Structure Initiative, Midwest Center For Structural Genomics, Mcsg, Iron, Iron-Sulfur, Metal-Binding, Ubiquinone, Oxidoreductase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   Y. Kim, R. Mulligan, S. Moy, A. Joachimiak
Crystal Structure Of The Domain Comprising The Regions Binding Nad And Fad From The Nadh:Ubiquinone Oxidoreductase Na Translocating, F Subunit From Porphyromonas Gingivalis.
To Be Published
PubMed: search

Molecule 1 - NADH:UBIQUINONE OXIDOREDUCTASE, NA TRANSLOCATING, F SUBUNIT
	Atcc	:	BAA-308
	Chains	:	A, B, C, D
	EC Number	:	1.6.5.-
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI
	Expression System Plasmid	:	PMCSG7
	Expression System Strain	:	BL21(DE3)MAGIC
	Expression System Taxid	:	562
	Expression System Vector Type	:	PLASMID
	Gene	:	NQRF, PG_2177
	Organism Scientific	:	PORPHYROMONAS GINGIVALIS
	Organism Taxid	:	242619
	Strain	:	W83

		1	2	3	4
Asymmetric Unit	:	A	B	C	D
Biological Unit 1 (1x)	:	A
Biological Unit 2 (1x)	:		B
Biological Unit 3 (1x)	:			C
Biological Unit 4 (1x)	:				D

Summary Information (see also Sequences/Alignments below)

Asymmetric Unit (3, 59)

No.	Name	Count	Type	Full Name
1	FAD	4	Ligand/Ion	FLAVIN-ADENINE DINUCLEOTIDE
2	MSE	44	Mod. Amino Acid	SELENOMETHIONINE
3	SO4	11	Ligand/Ion	SULFATE ION

Biological Unit 1 (3, 15)

No.	Name	Count	Type	Full Name
1	FAD	1	Ligand/Ion	FLAVIN-ADENINE DINUCLEOTIDE
2	MSE	11	Mod. Amino Acid	SELENOMETHIONINE
3	SO4	3	Ligand/Ion	SULFATE ION

Biological Unit 2 (3, 14)

No.	Name	Count	Type	Full Name
1	FAD	1	Ligand/Ion	FLAVIN-ADENINE DINUCLEOTIDE
2	MSE	11	Mod. Amino Acid	SELENOMETHIONINE
3	SO4	2	Ligand/Ion	SULFATE ION

Biological Unit 3 (3, 16)

No.	Name	Count	Type	Full Name
1	FAD	1	Ligand/Ion	FLAVIN-ADENINE DINUCLEOTIDE
2	MSE	11	Mod. Amino Acid	SELENOMETHIONINE
3	SO4	4	Ligand/Ion	SULFATE ION

Biological Unit 4 (3, 14)

No.	Name	Count	Type	Full Name
1	FAD	1	Ligand/Ion	FLAVIN-ADENINE DINUCLEOTIDE
2	MSE	11	Mod. Amino Acid	SELENOMETHIONINE
3	SO4	2	Ligand/Ion	SULFATE ION

(no "Site" information available for 2R6H)

(no "SS Bond" information available for 2R6H)

Asymmetric Unit

No.	Residues
1	Gly A:267	-	Pro A:268
2	Gly B:267	-	Pro B:268
3	Gly C:267	-	Pro C:268
4	Gly D:267	-	Pro D:268

(no "SAP(SNP)/Variant" information available for 2R6H)

(no "PROSITE Motif" information available for 2R6H)

(no "Exon" information available for 2R6H)

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:285
 aligned with Q7MT22_PORGI | Q7MT22 from UniProtKB/TrEMBL  Length:412

    Alignment length:285
                                   137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407     
         Q7MT22_PORGI   128 GVKEWECEVLSNKNVSTFIKEFVVKLPEGETMNFKSGSYAQIKIPKYNIRYADYDIQDRFRGDWDKMDAWSLTCKNEEETVRAYSMANYPAEGNIITLNVRIATPPFDRAANKWKAGIKPGISSSYIFSLKPGDKVMMSGPYGDFHIQDTDAEMLYIGGGAGMAPLRAQILHLFRTLKTGRKVSYWYGARSKNEIFYEEDFREIEREFPNFKFHIALSDPQPEDNWTGYVGFIHQVIYDNYLKDHDAPEDIEYYMCGPGPMANAVKGMLENLGVPRNMLFFDDFG 412
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 2r6hA01 A:128-270 Translation factors                                                                                                          -----------2r6hA02 A:282-399 Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module                                 ------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeeeeeeeee....eeeeeee.............eeeeee..eeee.hhh.....hhhhhhhhhhhh.eeee...eeeeee.........eeeeeee.....ee....ee......hhhhhhhh......eeeeeeee..........eeeeeee..hhhhhhhhhhhhhhh......eeeeeee.hhhhh.hhhhhhhhhhhh..eeeeeee...hhhhh......hhhhhhhhhh.....hhh.eeeeee.hhhhhhhhhhhhhhhh.hhh.eeee... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2r6h A 128 GVKEWECEVLSNKNVSTFIKEFVVKLPEGETmNFKSGSYAQIKIPKYNIRYADYDIQDRFRGDWDKmDAWSLTCKNEEETVRAYSmANYPAEGNIITLNVRIATPPFDRAANKWKAGIKPGISSSYIFSLKPGDKVmmSGPYGDFHIQDTDAEmLYIGGGAGmAPLRAQILHLFRTLKTGRKVSYWYGARSKNEIFYEEDFREIEREFPNFKFHIALSDPQPEDNWTGYVGFIHQVIYDNYLKDHDAPEDIEYYmCGPGPmANAVKGmLENLGVPRNmLFFDDFG 412
                                   137       147       157 |     167       177       187      |197       207     | 217       227       237       247       257      |267       277   |   287  |    297       307       317       327       337       347       357       367       377    |  387|      397       407     
                                                         159-MSE                            194-MSE            213-MSE                                            264-MSE          281-MSE  290-MSE                                                                                     382-MSE |      |       405-MSE   
                                                                                                                                                                   265-MSE                                                                                                                    388-MSE  |                 
                                                                                                                                                                                                                                                                                                     395-MSE

Chain B from PDB  Type:PROTEIN  Length:286
 aligned with Q7MT22_PORGI | Q7MT22 from UniProtKB/TrEMBL  Length:412

    Alignment length:286
                                   135       145       155       165       175       185       195       205       215       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       395       405      
         Q7MT22_PORGI   126 VFGVKEWECEVLSNKNVSTFIKEFVVKLPEGETMNFKSGSYAQIKIPKYNIRYADYDIQDRFRGDWDKMDAWSLTCKNEEETVRAYSMANYPAEGNIITLNVRIATPPFDRAANKWKAGIKPGISSSYIFSLKPGDKVMMSGPYGDFHIQDTDAEMLYIGGGAGMAPLRAQILHLFRTLKTGRKVSYWYGARSKNEIFYEEDFREIEREFPNFKFHIALSDPQPEDNWTGYVGFIHQVIYDNYLKDHDAPEDIEYYMCGPGPMANAVKGMLENLGVPRNMLFFDDF 411
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 2r6hB01 B:126-270 Translation factors                                                                                                            -----------2r6hB02 B:282-399 Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module                                 ------------ CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....eeeeeeeeeee....eeeeeee.............eeeeee..eeee.hhh..hhhhhhhhhhhhhhh.eeee...eeeeee.........eeeeeee...................hhhhhhhhhh....eeeeeeee...........eeeeee..hhhhhhhhhhhhhh.......eeeeeee.hhhhh.hhhhhhhhhhhh..eeeeeee...hhhhh...ee.hhhhhhhhhh.....hhhhheeeee.hhhhhhhhhhhhhhh..hhh.eeee.. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2r6h B 126 VFGVKEWECEVLSNKNVSTFIKEFVVKLPEGETmNFKSGSYAQIKIPKYNIRYADYDIQDRFRGDWDKmDAWSLTCKNEEETVRAYSmANYPAEGNIITLNVRIATPPFDRAANKWKAGIKPGISSSYIFSLKPGDKVmmSGPYGDFHIQDTDAEmLYIGGGAGmAPLRAQILHLFRTLKTGRKVSYWYGARSKNEIFYEEDFREIEREFPNFKFHIALSDPQPEDNWTGYVGFIHQVIYDNYLKDHDAPEDIEYYmCGPGPmANAVKGmLENLGVPRNmLFFDDF 411
                                   135       145       155   |   165       175       185       195       205       215       225       235       245       255       265       275     | 285    |  295       305       315       325       335       345       355       365       375      |385  |    395       405      
                                                           159-MSE                            194-MSE            213-MSE                                            264-MSE          281-MSE  290-MSE                                                                                     382-MSE |      |       405-MSE  
                                                                                                                                                                     265-MSE                                                                                                                    388-MSE  |                
                                                                                                                                                                                                                                                                                                       395-MSE

Chain C from PDB  Type:PROTEIN  Length:289
 aligned with Q7MT22_PORGI | Q7MT22 from UniProtKB/TrEMBL  Length:412

    Alignment length:289
                                   133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       323       333       343       353       363       373       383       393       403         
         Q7MT22_PORGI   124 EEVFGVKEWECEVLSNKNVSTFIKEFVVKLPEGETMNFKSGSYAQIKIPKYNIRYADYDIQDRFRGDWDKMDAWSLTCKNEEETVRAYSMANYPAEGNIITLNVRIATPPFDRAANKWKAGIKPGISSSYIFSLKPGDKVMMSGPYGDFHIQDTDAEMLYIGGGAGMAPLRAQILHLFRTLKTGRKVSYWYGARSKNEIFYEEDFREIEREFPNFKFHIALSDPQPEDNWTGYVGFIHQVIYDNYLKDHDAPEDIEYYMCGPGPMANAVKGMLENLGVPRNMLFFDDFG 412
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 2r6hC01 C:124-270 Translation factors                                                                                                              -----------2r6hC02 C:282-399 Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module                                 ------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......eeeeeeeeeeee....eeeeeee.............eeeeee..eeee.hhh..hhhhhhhhhhhhhhh.eeee...eeeeee.........eeeeeee.....ee....ee......hhhhhhhhh.....eeeeeeee...........eeeeee..hhhhhhhhhhhhhhh......eeeeeee.hhhhh.hhhhhhhhhhhh..eeeeeee...hhhhh...ee.hhhhhhhhhh.....hhhhheeeee.hhhhhhhhhhhhhhhh.hhh.eeee... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2r6h C 124 NAVFGVKEWECEVLSNKNVSTFIKEFVVKLPEGETmNFKSGSYAQIKIPKYNIRYADYDIQDRFRGDWDKmDAWSLTCKNEEETVRAYSmANYPAEGNIITLNVRIATPPFDRAANKWKAGIKPGISSSYIFSLKPGDKVmmSGPYGDFHIQDTDAEmLYIGGGAGmAPLRAQILHLFRTLKTGRKVSYWYGARSKNEIFYEEDFREIEREFPNFKFHIALSDPQPEDNWTGYVGFIHQVIYDNYLKDHDAPEDIEYYmCGPGPmANAVKGmLENLGVPRNmLFFDDFG 412
                                   133       143       153     | 163       173       183       193|      203       213       223       233       243       253       263||     273       283      |293       303       313       323       333       343       353       363       373       383    |  393 |     403 |       
                                                             159-MSE                            194-MSE            213-MSE                                            264-MSE          281-MSE  290-MSE                                                                                     382-MSE |      |       405-MSE   
                                                                                                                                                                       265-MSE                                                                                                                    388-MSE  |                 
                                                                                                                                                                                                                                                                                                         395-MSE

Chain D from PDB  Type:PROTEIN  Length:284
 aligned with Q7MT22_PORGI | Q7MT22 from UniProtKB/TrEMBL  Length:412

    Alignment length:284
                                   137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407    
         Q7MT22_PORGI   128 GVKEWECEVLSNKNVSTFIKEFVVKLPEGETMNFKSGSYAQIKIPKYNIRYADYDIQDRFRGDWDKMDAWSLTCKNEEETVRAYSMANYPAEGNIITLNVRIATPPFDRAANKWKAGIKPGISSSYIFSLKPGDKVMMSGPYGDFHIQDTDAEMLYIGGGAGMAPLRAQILHLFRTLKTGRKVSYWYGARSKNEIFYEEDFREIEREFPNFKFHIALSDPQPEDNWTGYVGFIHQVIYDNYLKDHDAPEDIEYYMCGPGPMANAVKGMLENLGVPRNMLFFDDF 411
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains 2r6hD01 D:128-270 Translation factors                                                                                                          -----------2r6hD02 D:282-399 Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module                                 ------------ CATH domains
           Pfam domains (1) --------------------------------------------------------------------FAD_binding_6-2r6hD01 D:196-274                                                --------NAD_binding_1-2r6hD05 D:283-394                                                                                 ----------------- Pfam domains (1)
           Pfam domains (2) --------------------------------------------------------------------FAD_binding_6-2r6hD02 D:196-274                                                --------NAD_binding_1-2r6hD06 D:283-394                                                                                 ----------------- Pfam domains (2)
           Pfam domains (3) --------------------------------------------------------------------FAD_binding_6-2r6hD03 D:196-274                                                --------NAD_binding_1-2r6hD07 D:283-394                                                                                 ----------------- Pfam domains (3)
           Pfam domains (4) --------------------------------------------------------------------FAD_binding_6-2r6hD04 D:196-274                                                --------NAD_binding_1-2r6hD08 D:283-394                                                                                 ----------------- Pfam domains (4)
         Sec.struct. author ..eeeeeeeeeeee....eeeeeee.............eeeeee..eeee.hhh..hhhhhhhhhhhh....eeee...eeeeee.........eeeeeee.....................hhhhhh......eeeeeeee...........eeeeee..hhhhhhhhhhhhhh.......eeeeeee.hhhhh.hhhhhhhhhhhh..eeeeeee...hhhhh...ee.hhhhhhhhhhhhhh.hhhhheeeee.hhhhhhhhhhhhhhhh.hhh.eee... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 2r6h D 128 GVKEWECEVLSNKNVSTFIKEFVVKLPEGETmNFKSGSYAQIKIPKYNIRYADYDIQDRFRGDWDKmDAWSLTCKNEEETVRAYSmANYPAEGNIITLNVRIATPPFDRAANKWKAGIKPGISSSYIFSLKPGDKVmmSGPYGDFHIQDTDAEmLYIGGGAGmAPLRAQILHLFRTLKTGRKVSYWYGARSKNEIFYEEDFREIEREFPNFKFHIALSDPQPEDNWTGYVGFIHQVIYDNYLKDHDAPEDIEYYmCGPGPmANAVKGmLENLGVPRNmLFFDDF 411
                                   137       147       157 |     167       177       187      |197       207     | 217       227       237       247       257      |267       277   |   287  |    297       307       317       327       337       347       357       367       377    |  387|      397       407    
                                                         159-MSE                            194-MSE            213-MSE                                            264-MSE          281-MSE  290-MSE                                                                                     382-MSE |      |       405-MSE  
                                                                                                                                                                   265-MSE                                                                                                                    388-MSE  |                
                                                                                                                                                                                                                                                                                                     395-MSE

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

(no "SCOP Domain" information available for 2R6H)

Asymmetric Unit

Classes(

)

Architectures( (-)

)

Topologies( (-)

)

Homologous Superfamilies( (-)

)

Organisms( (-)

)

Class: Alpha Beta (26913)

Architecture: 3-Layer(aba) Sandwich (12045)

Topology: Rossmann fold (7312)

Homologous Superfamily: Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module (85)

Porphyromonas gingivalis w83. Organism_taxid: 242619. Strain: w83. (1)

1a	2r6hA02	A:282-399
1b	2r6hB02	B:282-399
1c	2r6hC02	C:282-399
1d	2r6hD02	D:282-399

Class: Mainly Beta (13760)

Architecture: Beta Barrel (4804)

Topology: Elongation Factor Tu (Ef-tu); domain 3 (323)

Homologous Superfamily: Translation factors (223)

Porphyromonas gingivalis w83. Organism_taxid: 242619. Strain: w83. (1)

2a	2r6hA01	A:128-270
2b	2r6hD01	D:128-270
2c	2r6hB01	B:126-270
2d	2r6hC01	C:124-270

Asymmetric Unit(hide GO term definitions)

Chain A,B,C,D (Q7MT22_PORGI | Q7MT22)

molecular function
	GO:0051537	2 iron, 2 sulfur cluster binding	Interacting selectively and non-covalently with a 2 iron, 2 sulfur (2Fe-2S) cluster; this cluster consists of two iron atoms, with two inorganic sulfur atoms found between the irons and acting as bridging ligands.
	GO:0009055	electron carrier activity	Any molecular entity that serves as an electron acceptor and electron donor in an electron transport chain. An electron transport chain is a process in which a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient.
	GO:0051536	iron-sulfur cluster binding	Interacting selectively and non-covalently with an iron-sulfur cluster, a combination of iron and sulfur atoms.
	GO:0046872	metal ion binding	Interacting selectively and non-covalently with any metal ion.
	GO:0000166	nucleotide binding	Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
	GO:0016491	oxidoreductase activity	Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
	GO:0016655	oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	Catalysis of an oxidation-reduction (redox) reaction in which NADH or NADPH acts as a hydrogen or electron donor and reduces a quinone or a similar acceptor molecule.
biological process
	GO:0006811	ion transport	The directed movement of charged atoms or small charged molecules into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
	GO:0055114	oxidation-reduction process	A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
	GO:0006814	sodium ion transport	The directed movement of sodium ions (Na+) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
	GO:0006810	transport	The directed movement of substances (such as macromolecules, small molecules, ions) or cellular components (such as complexes and organelles) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter, pore or motor protein.
cellular component
	GO:0016021	integral component of membrane	The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
	GO:0016020	membrane	A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
	GO:0005886	plasma membrane	The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.

Asymmetric Unit
	Complete Structure
		Jena3D(integrated viewing of ligand, site, SAP, PROSITE, SCOP information)
		WebMol \| AstexViewer[tm]@PDBe (Java Applets, require no local installation except for Java; loading may be slow)
		STRAP (Java WebStart application, automatic local installation, requires Java; full application with system access!)
		RasMol (require local installation)
		Molscript (VRML) (requires installation of a VRML viewer; select preferred view via VRML and generate a mono or stereo PDF format file)

	Ligands, Modified Residues, Ions
		FAD	[ RasMol \| Jena3D ]	+environment [ RasMol \| Jena3D ]
		MSE	[ RasMol \| Jena3D ]	+environment [ RasMol \| Jena3D ]
		SO4	[ RasMol \| Jena3D ]	+environment [ RasMol \| Jena3D ]

	Sites
(no "Sites" information available for 2r6h)

	Cis Peptide Bonds
		Gly A:267 - Pro A:268	[ RasMol ]
		Gly B:267 - Pro B:268	[ RasMol ]
		Gly C:267 - Pro C:268	[ RasMol ]
		Gly D:267 - Pro D:268	[ RasMol ]

Biological Units
	Complete Structure
		Biological Unit 1	[ Jena3D ]
		Biological Unit 2	[ Jena3D ]
		Biological Unit 3	[ Jena3D ]
		Biological Unit 4	[ Jena3D ]

Jmol
	protein: cartoon or spacefill or dots and stick; nucleic acid: cartoon and stick; ligands: spacefill; active site: stick [ Asym. Unit PNG format \| Biol. Unit 1 PNG format \| Biol. Unit 2 PNG format \| Biol. Unit 3 PNG format \| Biol. Unit 4 PNG format ](automatic orientation, automatically generated)
Molscript
	protein, nucleic acid: cartoon; ligands: spacefill; active site: ball and stick [ mono PDF format \| stereo PDF format ](default orientation, automatically generated)

Access by PDB/NDB ID
	2r6h
		Family and Domain Information	:	ProDom \| SYSTERS
		General Structural Information	:	GlycoscienceDB \| MMDB \| NDB \| OCA \| PDB \| PDBe \| PDBj \| PDBsum \| PDBWiki \| PQS \| PROTEOPEDIA
		Orientation in Membranes	:	OPM
		Protein Surface	:	SURFACE
		Secondary Structure	:	DSSP (structure derived) \| HSSP (homology derived)
		Structural Genomics	:	GeneCensus
		Structural Neighbours	:	CE \| VAST
		Structure Classification	:	CATH \| Dali \| SCOP
		Validation and Original Data	:	BMRB Data View \| BMRB Restraints Grid \| EDS \| PROCHECK \| RECOORD \| WHAT_CHECK

Access by UniProt ID/Accession number
	Q7MT22_PORGI \| Q7MT22
		Comparative Protein Structure Models	:	ModBase
		Genomic Information	:	Ensembl
		Protein-protein Interaction	:	DIP
		Sequence, Family and Domain Information	:	InterPro \| Pfam \| SMART \| UniProtKB/TrEMBL

Access by Enzyme Classificator (EC Number)
	1.6.5.-
		General Enzyme Information	:	BRENDA \| EC-PDB \| Enzyme \| IntEnz
		Pathway	:	KEGG \| MetaCyc

Access by Disease Identifier (MIM ID)
	(no 'MIM ID' available)
		Disease Information	:	OMIM

Access by GenAge ID
	(no 'GenAge ID' available)
		Age Related Information	:	GenAge

Access by PDB/NDB ID
		Domain Information	:	XDom
		Interatomic Contacts of Structural Units	:	CSU
		Ligand-protein Contacts	:	LPC
		Protein Cavities	:	castP
		Sequence and Secondary Structure	:	PDBCartoon
		Structure Alignment	:	STRAP(Java WebStart application, automatic local installation, requires Java; full application with system access!)
		Structure and Sequence Browser	:	STING

Access by UniProt ID/Accession number
	Q7MT22_PORGI \| Q7MT22
		Protein Disorder Prediction	:	DisEMBL \| FoldIndex \| GLOBPLOT (for more information see DisProt)

(no "Entries Sharing at Least One Protein Chain" available for 2R6H)

(no "Related Entries Specified in the PDB File" available for 2R6H)

Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (3, 59)

Sites (0, 0)

SS Bonds (0, 0)

Cis Peptide Bonds (4, 4)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (0, 0)

Exons (0, 0)

Sequences/Alignments

Classification and Annotation

SCOP Domains (0, 0)

CATH Domains (2, 8)

Pfam Domains (2, 8)

Gene Ontology (14, 14)

Visualization

Interactive Views

Still Images

Databases and Analysis Tools

Databases

Analysis Tools

Related Entries

Entries Sharing at Least One Protein Chain (UniProt ID)

Related Entries Specified in the PDB File