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(-) Description

Title :  STRUCTURE OF A QUORUM-QUENCHING LACTONASE (AIIB) FROM AGROBACTERIUM TUMEFACIENS
 
Authors :  D. Liu, P. W. Thomas, J. Momb, Q. Hoang, G. A. Petsko, D. Ringe, W. Fast
Date :  24 Aug 07  (Deposition) - 09 Oct 07  (Release) - 17 Jun 15  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.75
Chains :  Asym. Unit :  A,B,C,D,E,F
Biol. Unit 1:  A (1x),E (1x)
Biol. Unit 2:  B,C  (1x)
Biol. Unit 3:  D (1x),F (1x)
Biol. Unit 4:  A (1x),B (1x),C (1x),D (1x),E (1x),F (1x)
Biol. Unit 5:  E  (1x)
Biol. Unit 6:  F  (1x)
Biol. Unit 7:  A  (1x)
Biol. Unit 8:  B  (1x)
Biol. Unit 9:  C  (1x)
Biol. Unit 10:  D  (1x)
Keywords :  Lactonase, N-Acyl Hompserine Lactone, Di-Nuclear Zinc Center, Quorum Quenching, Aiib, Phosphate, Agrobacterium Tumefaciens, Hydrolase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  D. Liu, P. W. Thomas, J. Momb, Q. Q. Hoang, G. A. Petsko, D. Ringe, W. Fast
Structure And Specificity Of A Quorum-Quenching Lactonase (Aiib) From Agrobacterium Tumefaciens.
Biochemistry V. 46 11789 2007
PubMed-ID: 17900178  |  Reference-DOI: 10.1021/BI7012849

(-) Compounds

Molecule 1 - ZN-DEPENDENT HYDROLASES
    Chains: A, B, C, D, E, F
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PMAL
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Gene: AIIB
    Organism Scientific: AGROBACTERIUM TUMEFACIENS
    Organism Taxid: 176299
    Strain: C58/ATCC 33970
    Synonym: AGR_PTI_140P

 Structural Features

(-) Chains, Units

  123456
Asymmetric Unit : ABCDEF
Biological Unit 1 (1x): A (1x)   E (1x) 
Biological Unit 2 (1x):  BC   
Biological Unit 3 (1x):    D (1x) F (1x)
Biological Unit 4 (1x): A (1x)B (1x)C (1x)D (1x)E (1x)F (1x)
Biological Unit 5 (1x):     E 
Biological Unit 6 (1x):      F
Biological Unit 7 (1x): A     
Biological Unit 8 (1x):  B    
Biological Unit 9 (1x):   C   
Biological Unit 10 (1x):    D  

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (3, 31)

Asymmetric Unit (3, 31)
No.NameCountTypeFull Name
1GOL10Ligand/IonGLYCEROL
2PO49Ligand/IonPHOSPHATE ION
3ZN12Ligand/IonZINC ION
Biological Unit 1 (2, 4)
No.NameCountTypeFull Name
1GOL3Ligand/IonGLYCEROL
2PO41Ligand/IonPHOSPHATE ION
3ZN-1Ligand/IonZINC ION
Biological Unit 2 (2, 8)
No.NameCountTypeFull Name
1GOL4Ligand/IonGLYCEROL
2PO44Ligand/IonPHOSPHATE ION
3ZN-1Ligand/IonZINC ION
Biological Unit 3 (2, 2)
No.NameCountTypeFull Name
1GOL1Ligand/IonGLYCEROL
2PO41Ligand/IonPHOSPHATE ION
3ZN-1Ligand/IonZINC ION
Biological Unit 4 (0, 0)
No.NameCountTypeFull Name
1GOL-1Ligand/IonGLYCEROL
2PO4-1Ligand/IonPHOSPHATE ION
3ZN-1Ligand/IonZINC ION
Biological Unit 5 (2, 3)
No.NameCountTypeFull Name
1GOL1Ligand/IonGLYCEROL
2PO42Ligand/IonPHOSPHATE ION
3ZN-1Ligand/IonZINC ION
Biological Unit 6 (2, 2)
No.NameCountTypeFull Name
1GOL1Ligand/IonGLYCEROL
2PO41Ligand/IonPHOSPHATE ION
3ZN-1Ligand/IonZINC ION
Biological Unit 7 (2, 4)
No.NameCountTypeFull Name
1GOL3Ligand/IonGLYCEROL
2PO41Ligand/IonPHOSPHATE ION
3ZN-1Ligand/IonZINC ION
Biological Unit 8 (2, 4)
No.NameCountTypeFull Name
1GOL2Ligand/IonGLYCEROL
2PO42Ligand/IonPHOSPHATE ION
3ZN-1Ligand/IonZINC ION
Biological Unit 9 (2, 4)
No.NameCountTypeFull Name
1GOL2Ligand/IonGLYCEROL
2PO42Ligand/IonPHOSPHATE ION
3ZN-1Ligand/IonZINC ION
Biological Unit 10 (2, 2)
No.NameCountTypeFull Name
1GOL1Ligand/IonGLYCEROL
2PO41Ligand/IonPHOSPHATE ION
3ZN-1Ligand/IonZINC ION

(-) Sites  (31, 31)

Asymmetric Unit (31, 31)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREASP A:115 , HIS A:116 , ASP A:213 , HIS A:259 , PO4 A:279BINDING SITE FOR RESIDUE ZN A 277
02AC2SOFTWAREHIS A:111 , HIS A:113 , HIS A:191 , ASP A:213 , PO4 A:279BINDING SITE FOR RESIDUE ZN A 278
03AC3SOFTWAREHIS A:111 , HIS A:113 , ASN A:114 , ASP A:115 , HIS A:116 , HIS A:191 , ASP A:213 , TYR A:216 , HIS A:259 , ZN A:277 , ZN A:278 , GOL A:280 , HOH A:326BINDING SITE FOR RESIDUE PO4 A 279
04AC4SOFTWAREASP B:115 , HIS B:116 , ASP B:213 , HIS B:259 , PO4 B:279BINDING SITE FOR RESIDUE ZN B 277
05AC5SOFTWAREHIS B:111 , HIS B:113 , HIS B:191 , ASP B:213 , PO4 B:279BINDING SITE FOR RESIDUE ZN B 278
06AC6SOFTWAREHIS B:111 , HIS B:113 , ASN B:114 , ASP B:115 , HIS B:116 , HIS B:191 , ASP B:213 , TYR B:216 , HIS B:259 , ZN B:277 , ZN B:278 , GOL B:281 , HOH B:350BINDING SITE FOR RESIDUE PO4 B 279
07AC7SOFTWAREHIS B:243 , GLN B:246 , TYR B:247 , ARG B:251 , HOH B:483BINDING SITE FOR RESIDUE PO4 B 280
08AC8SOFTWAREASP C:115 , HIS C:116 , ASP C:213 , HIS C:259 , PO4 C:279BINDING SITE FOR RESIDUE ZN C 277
09AC9SOFTWAREHIS C:111 , HIS C:113 , HIS C:191 , ASP C:213 , PO4 C:279BINDING SITE FOR RESIDUE ZN C 278
10BC1SOFTWAREHIS C:111 , HIS C:113 , ASN C:114 , ASP C:115 , HIS C:116 , HIS C:191 , ASP C:213 , TYR C:216 , HIS C:259 , ZN C:277 , ZN C:278 , GOL C:281 , HOH C:319BINDING SITE FOR RESIDUE PO4 C 279
11BC2SOFTWAREGLU C:175 , ASN C:183 , HIS C:243 , GLN C:246 , TYR C:247 , SER C:250 , ARG C:251 , HOH C:314BINDING SITE FOR RESIDUE PO4 C 280
12BC3SOFTWAREASP D:115 , HIS D:116 , ASP D:213 , HIS D:259 , PO4 D:279BINDING SITE FOR RESIDUE ZN D 277
13BC4SOFTWAREHIS D:111 , HIS D:113 , HIS D:191 , ASP D:213 , PO4 D:279BINDING SITE FOR RESIDUE ZN D 278
14BC5SOFTWAREHIS D:111 , HIS D:113 , ASN D:114 , ASP D:115 , HIS D:116 , HIS D:191 , ASP D:213 , TYR D:216 , HIS D:259 , ZN D:277 , ZN D:278 , GOL D:280 , HOH D:335BINDING SITE FOR RESIDUE PO4 D 279
15BC6SOFTWAREASP E:115 , HIS E:116 , ASP E:213 , HIS E:259 , PO4 E:279BINDING SITE FOR RESIDUE ZN E 277
16BC7SOFTWAREHIS E:111 , HIS E:113 , HIS E:191 , ASP E:213 , PO4 E:279BINDING SITE FOR RESIDUE ZN E 278
17BC8SOFTWAREHIS E:111 , HIS E:113 , ASN E:114 , ASP E:115 , HIS E:116 , HIS E:191 , ASP E:213 , TYR E:216 , HIS E:259 , ZN E:277 , ZN E:278 , GOL E:281 , HOH E:347BINDING SITE FOR RESIDUE PO4 E 279
18BC9SOFTWAREHIS E:243 , GLN E:246 , TYR E:247 , ARG E:251BINDING SITE FOR RESIDUE PO4 E 280
19CC1SOFTWAREASP F:115 , HIS F:116 , ASP F:213 , HIS F:259 , PO4 F:279BINDING SITE FOR RESIDUE ZN F 277
20CC2SOFTWAREHIS F:111 , HIS F:113 , HIS F:191 , ASP F:213 , PO4 F:279BINDING SITE FOR RESIDUE ZN F 278
21CC3SOFTWAREHIS F:111 , HIS F:113 , ASN F:114 , ASP F:115 , HIS F:116 , HIS F:191 , ASP F:213 , TYR F:216 , HIS F:259 , ZN F:277 , ZN F:278 , GOL F:280 , HOH F:442BINDING SITE FOR RESIDUE PO4 F 279
22CC4SOFTWAREILE A:41 , ASN A:114 , ASP A:115 , HIS A:259 , PO4 A:279 , HOH A:450 , HOH A:539 , HOH A:555BINDING SITE FOR RESIDUE GOL A 280
23CC5SOFTWARESER A:266 , TYR A:275 , HOH A:387 , HOH A:560 , HOH A:561BINDING SITE FOR RESIDUE GOL A 281
24CC6SOFTWAREHOH A:570 , MET C:1BINDING SITE FOR RESIDUE GOL A 282
25CC7SOFTWAREILE B:41 , ASP B:115 , TYR B:216 , HIS B:259 , PO4 B:279BINDING SITE FOR RESIDUE GOL B 281
26CC8SOFTWAREALA B:136 , ARG B:140 , HOH B:306BINDING SITE FOR RESIDUE GOL B 282
27CC9SOFTWAREILE C:13 , ILE C:41 , ASP C:115 , TYR C:216 , HIS C:259 , PO4 C:279BINDING SITE FOR RESIDUE GOL C 281
28DC1SOFTWAREASP B:233 , ILE B:235 , THR C:189 , ASP C:233 , GLY C:236 , HOH C:541 , HOH C:562 , HOH C:574BINDING SITE FOR RESIDUE GOL C 282
29DC2SOFTWAREASN D:114 , ASP D:115 , PO4 D:279 , HOH D:365 , HOH D:401 , HOH D:419BINDING SITE FOR RESIDUE GOL D 280
30DC3SOFTWAREILE E:41 , ASN E:114 , ASP E:115 , HIS E:259 , PO4 E:279 , HOH E:371 , HOH E:469 , HOH E:471 , HOH E:501BINDING SITE FOR RESIDUE GOL E 281
31DC4SOFTWAREILE F:13 , ILE F:41 , ASN F:114 , ASP F:115 , HIS F:259 , PO4 F:279 , HOH F:358 , HOH F:393 , HOH F:446 , HOH F:454BINDING SITE FOR RESIDUE GOL F 280

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 2R2D)

(-) Cis Peptide Bonds  (12, 12)

Asymmetric Unit
No.Residues
1Gly A:222 -Pro A:223
2Pro A:223 -Pro A:224
3Gly B:222 -Pro B:223
4Pro B:223 -Pro B:224
5Gly C:222 -Pro C:223
6Pro C:223 -Pro C:224
7Gly D:222 -Pro D:223
8Pro D:223 -Pro D:224
9Gly E:222 -Pro E:223
10Pro E:223 -Pro E:224
11Gly F:222 -Pro F:223
12Pro F:223 -Pro F:224

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 2R2D)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 2R2D)

(-) Exons   (0, 0)

(no "Exon" information available for 2R2D)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:276
 aligned with AHLLB_AGRFC | A9CKY2 from UniProtKB/Swiss-Prot  Length:276

    Alignment length:276
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270      
          AHLLB_AGRFC     1 MGNKLFVLDLGEIRVDENFIIANSTFVTPQKPTVSSRLIDIPVSAYLIQCTDATVLYDTGCHPECMGTNGRWPAQSQLNAPYIGASECNLPERLRQLGLSPDDISTVVLSHLHNDHAGCVEYFGKSRLIAHEDEFATAVRYFATGDHSSPYIVKDIEAWLATPRNWDLVGRDERERELAPGVNLLNFGTGHASGMLGLAVRLEKQPGFLLVSDACYTATNYGPPARRAGVLHDTIGYDRTVSHIRQYAESRSLTVLFGHDREQFASLIKSTDGFYE 276
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ...eeeeeeeeeeeeehhhhh................eeeeeeeeeeee....eeee...............hhhhhhhh........hhhhhhhhh..hhhhh.eee..........hhhhh...eeeeehhhhhhhhhhhhh.......hhhhhhhhh.....eeee.....eeeee..eeeeeee......eeeeeee.....eeeeeehhh.hhhhhh..........hhhhhhhhhhhhhhhhhhh..eeee..hhhhhhhh......... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 2r2d A   1 MGNKLFVLDLGEIRVDENFIIANSTFVTPQKPTVSSRLIDIPVSAYLIQCTDATVLYDTGCHPECMGTNGRWPAQSQLNAPYIGASECNLPERLRQLGLSPDDISTVVLSHLHNDHAGCVEYFGKSRLIAHEDEFATAVRYFATGDHSSPYIVKDIEAWLATPRNWDLVGRDERERELAPGVNLLNFGTGHASGMLGLAVRLEKQPGFLLVSDACYTATNYGPPARRAGVLHDTIGYDRTVSHIRQYAESRSLTVLFGHDREQFASLIKSTDGFYE 276
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270      


Chain B from PDB  Type:PROTEIN  Length:276
 aligned with AHLLB_AGRFC | A9CKY2 from UniProtKB/Swiss-Prot  Length:276

    Alignment length:276
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270      
          AHLLB_AGRFC     1 MGNKLFVLDLGEIRVDENFIIANSTFVTPQKPTVSSRLIDIPVSAYLIQCTDATVLYDTGCHPECMGTNGRWPAQSQLNAPYIGASECNLPERLRQLGLSPDDISTVVLSHLHNDHAGCVEYFGKSRLIAHEDEFATAVRYFATGDHSSPYIVKDIEAWLATPRNWDLVGRDERERELAPGVNLLNFGTGHASGMLGLAVRLEKQPGFLLVSDACYTATNYGPPARRAGVLHDTIGYDRTVSHIRQYAESRSLTVLFGHDREQFASLIKSTDGFYE 276
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ...eeeeeeeeeeeeehhhhh................eeeeeeeeeeee....eeee...............hhhhhhhh........hhhhhhhhh..hhhhh.eee..........hhhhh...eeeeehhhhhhhhhhhhh.......hhhhhhhhhh...eeeee.....eeeee..eeeeeee......eeeeeee.....eeeeeehhh.hhhhhh..........hhhhhhhhhhhhhhhhhhh..eeee..hhhhhhhh......... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 2r2d B   1 MGNKLFVLDLGEIRVDENFIIANSTFVTPQKPTVSSRLIDIPVSAYLIQCTDATVLYDTGCHPECMGTNGRWPAQSQLNAPYIGASECNLPERLRQLGLSPDDISTVVLSHLHNDHAGCVEYFGKSRLIAHEDEFATAVRYFATGDHSSPYIVKDIEAWLATPRNWDLVGRDERERELAPGVNLLNFGTGHASGMLGLAVRLEKQPGFLLVSDACYTATNYGPPARRAGVLHDTIGYDRTVSHIRQYAESRSLTVLFGHDREQFASLIKSTDGFYE 276
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270      


Chain C from PDB  Type:PROTEIN  Length:276
 aligned with AHLLB_AGRFC | A9CKY2 from UniProtKB/Swiss-Prot  Length:276

    Alignment length:276
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270      
          AHLLB_AGRFC     1 MGNKLFVLDLGEIRVDENFIIANSTFVTPQKPTVSSRLIDIPVSAYLIQCTDATVLYDTGCHPECMGTNGRWPAQSQLNAPYIGASECNLPERLRQLGLSPDDISTVVLSHLHNDHAGCVEYFGKSRLIAHEDEFATAVRYFATGDHSSPYIVKDIEAWLATPRNWDLVGRDERERELAPGVNLLNFGTGHASGMLGLAVRLEKQPGFLLVSDACYTATNYGPPARRAGVLHDTIGYDRTVSHIRQYAESRSLTVLFGHDREQFASLIKSTDGFYE 276
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ...eeeeeeeeeeeeehhhhh................eeeeeeeeeeeee..eeeee...............hhhhhhhh........hhhhhhhhh..hhhhh.eee..........hhhhh...eeeeehhhhhhhhhhhhhh......hhhhhhhhh.....eeee.....eeeee..eeeeeee......eeeeeee.....eeeeeehhh.hhhhhh..........hhhhhhhhhhhhhhhhhhh..eeee..hhhhhhhh......... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 2r2d C   1 MGNKLFVLDLGEIRVDENFIIANSTFVTPQKPTVSSRLIDIPVSAYLIQCTDATVLYDTGCHPECMGTNGRWPAQSQLNAPYIGASECNLPERLRQLGLSPDDISTVVLSHLHNDHAGCVEYFGKSRLIAHEDEFATAVRYFATGDHSSPYIVKDIEAWLATPRNWDLVGRDERERELAPGVNLLNFGTGHASGMLGLAVRLEKQPGFLLVSDACYTATNYGPPARRAGVLHDTIGYDRTVSHIRQYAESRSLTVLFGHDREQFASLIKSTDGFYE 276
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270      


Chain D from PDB  Type:PROTEIN  Length:276
 aligned with AHLLB_AGRFC | A9CKY2 from UniProtKB/Swiss-Prot  Length:276

    Alignment length:276
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270      
          AHLLB_AGRFC     1 MGNKLFVLDLGEIRVDENFIIANSTFVTPQKPTVSSRLIDIPVSAYLIQCTDATVLYDTGCHPECMGTNGRWPAQSQLNAPYIGASECNLPERLRQLGLSPDDISTVVLSHLHNDHAGCVEYFGKSRLIAHEDEFATAVRYFATGDHSSPYIVKDIEAWLATPRNWDLVGRDERERELAPGVNLLNFGTGHASGMLGLAVRLEKQPGFLLVSDACYTATNYGPPARRAGVLHDTIGYDRTVSHIRQYAESRSLTVLFGHDREQFASLIKSTDGFYE 276
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ...eeeeeeeeeeeee.hhh.................eeeeeeeeeeee....eeee...............hhhhhhhh........hhhhhhhhh..hhhhh.eee..........hhhhh...eeeeehhhhhhhhhhhhh.......hhhhhhhhhh...eeeee.....eeeee..eeeeeee......eeeeeee.....eeeeeehhh.hhhhhh..........hhhhhhhhhhhhhhhhhhhh.eeee..hhhhhhhh......... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 2r2d D   1 MGNKLFVLDLGEIRVDENFIIANSTFVTPQKPTVSSRLIDIPVSAYLIQCTDATVLYDTGCHPECMGTNGRWPAQSQLNAPYIGASECNLPERLRQLGLSPDDISTVVLSHLHNDHAGCVEYFGKSRLIAHEDEFATAVRYFATGDHSSPYIVKDIEAWLATPRNWDLVGRDERERELAPGVNLLNFGTGHASGMLGLAVRLEKQPGFLLVSDACYTATNYGPPARRAGVLHDTIGYDRTVSHIRQYAESRSLTVLFGHDREQFASLIKSTDGFYE 276
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270      


Chain E from PDB  Type:PROTEIN  Length:276
 aligned with AHLLB_AGRFC | A9CKY2 from UniProtKB/Swiss-Prot  Length:276

    Alignment length:276
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270      
          AHLLB_AGRFC     1 MGNKLFVLDLGEIRVDENFIIANSTFVTPQKPTVSSRLIDIPVSAYLIQCTDATVLYDTGCHPECMGTNGRWPAQSQLNAPYIGASECNLPERLRQLGLSPDDISTVVLSHLHNDHAGCVEYFGKSRLIAHEDEFATAVRYFATGDHSSPYIVKDIEAWLATPRNWDLVGRDERERELAPGVNLLNFGTGHASGMLGLAVRLEKQPGFLLVSDACYTATNYGPPARRAGVLHDTIGYDRTVSHIRQYAESRSLTVLFGHDREQFASLIKSTDGFYE 276
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ...eeeeeeeeeeeeehhhhh................eeeeeeeeeeee....eeee...............hhhhhhhh........hhhhhhhh...hhhhh.eee..........hhhhh...eeeeehhhhhhhhhhhhh.......hhhhhhhhhh...eeeee.....eeeee..eeeeeee......eeeeeee.....eeeeeehhh.hhhhhh..........hhhhhhhhhhhhhhhhhh...eeee..hhhhhh........... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 2r2d E   1 MGNKLFVLDLGEIRVDENFIIANSTFVTPQKPTVSSRLIDIPVSAYLIQCTDATVLYDTGCHPECMGTNGRWPAQSQLNAPYIGASECNLPERLRQLGLSPDDISTVVLSHLHNDHAGCVEYFGKSRLIAHEDEFATAVRYFATGDHSSPYIVKDIEAWLATPRNWDLVGRDERERELAPGVNLLNFGTGHASGMLGLAVRLEKQPGFLLVSDACYTATNYGPPARRAGVLHDTIGYDRTVSHIRQYAESRSLTVLFGHDREQFASLIKSTDGFYE 276
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270      


Chain F from PDB  Type:PROTEIN  Length:276
 aligned with AHLLB_AGRFC | A9CKY2 from UniProtKB/Swiss-Prot  Length:276

    Alignment length:276
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270      
          AHLLB_AGRFC     1 MGNKLFVLDLGEIRVDENFIIANSTFVTPQKPTVSSRLIDIPVSAYLIQCTDATVLYDTGCHPECMGTNGRWPAQSQLNAPYIGASECNLPERLRQLGLSPDDISTVVLSHLHNDHAGCVEYFGKSRLIAHEDEFATAVRYFATGDHSSPYIVKDIEAWLATPRNWDLVGRDERERELAPGVNLLNFGTGHASGMLGLAVRLEKQPGFLLVSDACYTATNYGPPARRAGVLHDTIGYDRTVSHIRQYAESRSLTVLFGHDREQFASLIKSTDGFYE 276
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ...eeeeeeeeeeeeehhhhh................eeeeeeeeeeee....eeee...............hhhhhhhh........hhhhhhhhh..hhhhh.eee..........hhhhh...eeeeehhhhhhhhhhhhh.......hhhhhhhhh....eeeee.....eeeee..eeeeeee......eeeeeee.....eeeeeehhh.hhhhhh..........hhhhhhhhhhhhhhhhhh...eeee..hhhhhhhh......... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 2r2d F   1 MGNKLFVLDLGEIRVDENFIIANSTFVTPQKPTVSSRLIDIPVSAYLIQCTDATVLYDTGCHPECMGTNGRWPAQSQLNAPYIGASECNLPERLRQLGLSPDDISTVVLSHLHNDHAGCVEYFGKSRLIAHEDEFATAVRYFATGDHSSPYIVKDIEAWLATPRNWDLVGRDERERELAPGVNLLNFGTGHASGMLGLAVRLEKQPGFLLVSDACYTATNYGPPARRAGVLHDTIGYDRTVSHIRQYAESRSLTVLFGHDREQFASLIKSTDGFYE 276
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 2R2D)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 2R2D)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 2R2D)

(-) Gene Ontology  (3, 3)

Asymmetric Unit(hide GO term definitions)
Chain A,B,C,D,E,F   (AHLLB_AGRFC | A9CKY2)
molecular function
    GO:0102007    acyl-L-homoserine-lactone lactonohydrolase activity    Catalysis of the reaction: H2O + an N-acyl-L-homoserine lactone <=> H+ + an N-acyl-L-homoserine.
    GO:0016787    hydrolase activity    Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.

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 Related Entries

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